HHsearch alignment for GI: 254781062 and conserved domain: COG0112
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism].
Probab=99.88 E-value=8.8e-23 Score=163.21 Aligned_cols=345 Identities=18% Similarity=0.189 Sum_probs=228.2
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 6599766888898989999999999861498660-267999999999999-99999998287976543346876898765
Q gi|254781062|r 23 PLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHR-GLHYMANAVTDKYEK-ARDKVRRFINASSVKEIIFTRSATESINL 100 (406)
Q Consensus 23 ~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~-aR~~ia~~lga~~~~~v~ft~~~Te~~n~ 100 (406)
T Consensus 27 ~~ieL-IASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~an--VQPhSGs~AN~a 103 (413)
T COG0112 27 EHIEL-IASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYAN--VQPHSGSQANQA 103 (413)
T ss_pred HCEEE-EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCC--CCCCCCHHHHHH
T ss_conf 34335-512554789999997457753011589976356787217999999999999984887504--588875689999
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHH---HCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHCC-CCCCCCCCCCCCC
Q ss_conf 4322344432013443454011000010---0001222232222222222-222102578875102-3344332222222
Q gi|254781062|r 101 VSYGWGARHISTGDEIVLSVMEHHSNII---PWYFLRQRRGASLVWVPID-NQGFFHIDEFKNRLT-ERTKLIAITHMSN 175 (406)
Q Consensus 101 ~~~~~~~~~~~~gd~Vi~s~~eh~s~~~---~~~~~~~~~G~~v~~i~~~-~~g~id~~~l~~~i~-~~t~lv~i~~~~~ 175 (406)
T Consensus 104 v~~Al----l~pGD~imgm~l~~GGHltHg~~v~~sG-~~-~~~v~Y~vd~et~~IDyD~~~k~a~e~kPKlii~G~Sa- 176 (413)
T COG0112 104 VYLAL----LQPGDTIMGLDLSHGGHLTHGSPVNFSG-KL-FNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSA- 176 (413)
T ss_pred HHHHH----CCCCCEEEECCCCCCCCCCCCCCCCCCC-CE-EEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCC-
T ss_conf 99997----3898857505678787655799877664-05-77676240633475179999999998499789977603-
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC-----CCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCC-CCCCCCEE
Q ss_conf 233333332100023444431012332000111-----000011001122234322-23544431000256-66310012
Q gi|254781062|r 176 VLGTVIPIKEICRIAHERNIPVLVDGSQGSVHN-----FVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKE-SRLNEMDP 248 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~-----~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~-~~~~~~~p 248 (406)
T Consensus 177 -Y~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~--AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~ 252 (413)
T COG0112 177 -YSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH--ADVVTTTTHKTLRGPRG-GIILTNDEELAKKINS 252 (413)
T ss_pred -CCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCCCC--CCEEECCCCCCCCCCCC-EEEEECCHHHHHHHHH
T ss_conf -5544678999999987193677217788888745667999875--52675775347789984-1798362999987640
Q ss_pred ECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC-
Q ss_conf 1145303433202453003310000012212024566421012332222222222222222222222222210132268-
Q gi|254781062|r 249 FMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNE- 327 (406)
Q Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~- 327 (406)
T Consensus 253 aVFPg~--------------------qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGg 311 (413)
T COG0112 253 AVFPGL--------------------QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGG 311 (413)
T ss_pred HCCCCC--------------------CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCC
T ss_conf 007766--------------------788278889999999999728138999999999999999999976-98671588
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHHHHHHHH
Q ss_conf 52158679998089999999999987896999752112788997289957999935888----99999999999999999
Q gi|254781062|r 328 SLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN----TYEEADKFIETLKKSIQ 403 (406)
Q Consensus 328 ~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n----t~edid~~i~~l~~~i~ 403 (406)
T Consensus 312 TdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~-~p-~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 312 TDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPE-SP-FVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD 389 (413)
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCCC-CC-CCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 64448999724679877899999997097652688999998-88-78766340668886357988999999999999995
Q ss_pred H
Q ss_conf 7
Q gi|254781062|r 404 F 404 (406)
Q Consensus 404 ~ 404 (406)
T Consensus 390 ~ 390 (413)
T COG0112 390 G 390 (413)
T ss_pred C
T ss_conf 5