HHsearch alignment for GI: 254781062 and conserved domain: COG0160
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism].
Probab=99.74 E-value=9e-17 Score=125.32 Aligned_cols=336 Identities=17% Similarity=0.222 Sum_probs=198.6
Q ss_pred CEEEEECCC------CCCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 659976688------88989899999999998614-98660267999999999999999999982879765433468768
Q gi|254781062|r 23 PLIYFDNAA------SAQKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSAT 95 (406)
Q Consensus 23 ~~iYld~a~------~~~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~T 95 (406)
T Consensus 55 G~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~-~~~~~~---e--~~v~~a-e~L~~~~p~~~~~~~~f~~sGa 127 (447)
T COG0160 55 GNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTH-TRDLYY---E--PYVELA-EKLTALAPGSGLKKVFFGNSGA 127 (447)
T ss_pred CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCCCCC---H--HHHHHH-HHHHHHCCCCCCCEEEECCCCH
T ss_conf 99898825676201037899899999999999730135-776663---3--699999-9999758865677699568837
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH-----CCCCCCCCC-----CCCCCCCCCCC------------CCCH
Q ss_conf 9876543223444320134434540110000100-----001222232-----22222222222------------2102
Q gi|254781062|r 96 ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIP-----WYFLRQRRG-----ASLVWVPIDNQ------------GFFH 153 (406)
Q Consensus 96 e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~-----~~~~~~~~G-----~~v~~i~~~~~------------g~id 153 (406)
T Consensus 128 eA~E~AiKiAr--~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~ 205 (447)
T COG0160 128 EAVEAAIKIAR--AYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205 (447)
T ss_pred HHHHHHHHHHH--HHHCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf 78999999999--9858984899788655632666875457665335788999985881688655675556635556899
Q ss_pred HHHHHHHCCC------CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHHHC--CC
Q ss_conf 5788751023------3443322222222333333----3210002344443101233200-0111--00001100--11
Q gi|254781062|r 154 IDEFKNRLTE------RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQDID--CD 218 (406)
Q Consensus 154 ~~~l~~~i~~------~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~~~--~D 218 (406)
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PD 285 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPD 285 (447)
T ss_pred HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCC
T ss_conf 99999998740478775469998421078997479899999999999981988999566558886626012242099987
Q ss_pred CCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 22234322-23544431000256663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 219 WYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 219 ~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
T Consensus 286 ivt~a--K~ig~G~Pl~avv~r~ei~~-~~~g~~~~T-----------f--------~G--Npva~Aaa~AvL~vie--- 338 (447)
T COG0160 286 IVTLA--KSLGGGLPLSAVVGRAEIMD-WPPGGHGGT-----------F--------GG--NPVACAAALAVLDVIE--- 338 (447)
T ss_pred EEEEC--CCCCCCCCEEEEECCHHHCC-CCCCCCCCC-----------C--------CC--CHHHHHHHHHHHHHHH---
T ss_conf 89853--33457872067744577601-477654777-----------7--------86--9899999999999998---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEE--CC----CC---HHHHHHHHHHCCCEEEE-CCHHHH
Q ss_conf 22222222222222222222221-0132268521586799980--89----99---99999999878969997-521127
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRL--GN----IH---PYDLALFLDGEGIAIRA-GTHCAN 366 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~--~~----~~---~~~v~~~L~~~gI~v~~-G~~ca~ 366 (406)
T Consensus 339 ~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~---- 414 (447)
T COG0160 339 EENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGP---- 414 (447)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCC----
T ss_conf 7429999999999999999999864674421244650789998337877899999999999999986988854578----
Q ss_pred HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 889972899579999358889999999999999999971
Q gi|254781062|r 367 PLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 367 ~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
T Consensus 415 -------~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 415 -------HGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred -------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -------78679982895438999999999999999854