HHsearch alignment for GI: 254781062 and conserved domain: KOG1412
>KOG1412 consensus.
Probab=97.28 E-value=0.00014 Score=48.47 Aligned_cols=264 Identities=13% Similarity=0.233 Sum_probs=138.6
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCHH---HHHHHHHHCCCCCCCCCCC----CCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 76898765432234443201344345401---1000010000122223222----2222222222102578875102334
Q gi|254781062|r 93 SATESINLVSYGWGARHISTGDEIVLSVM---EHHSNIIPWYFLRQRRGAS----LVWVPIDNQGFFHIDEFKNRLTERT 165 (406)
Q Consensus 93 ~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~---eh~s~~~~~~~~~~~~G~~----v~~i~~~~~g~id~~~l~~~i~~~t 165 (406)
T Consensus 107 sGTGAl~~~A~Fl~--~~~~~~~VY~SnPTW~nH~~i---f----~~aGf~tv~~Y~yWd~-~~k~~d~e~~Lsdl~~AP 176 (410)
T KOG1412 107 SGTGALRIAADFLA--TFYNKNTVYVSNPTWENHHAI---F----EKAGFTTVATYPYWDA-ENKCVDLEGFLSDLESAP 176 (410)
T ss_pred CCCCHHHHHHHHHH--HHCCCCEEEECCCCHHHHHHH---H----HHCCCCEEEEEEEECC-CCCEECHHHHHHHHHHCC
T ss_conf 56532456678888--752465267438860677889---9----8738844556663157-771213999998986389
Q ss_pred --CCCCCCCC-CCCCCCCCC----CCCEECCCCCCCCCCCCCCC-CCCCCCCCCHHHHCC--------CC-CCCCCCCC-
Q ss_conf --43322222-222333333----32100023444431012332-000111000011001--------12-22343222-
Q gi|254781062|r 166 --KLIAITHM-SNVLGTVIP----IKEICRIAHERNIPVLVDGS-QGSVHNFVDVQDIDC--------DW-YIITGHKL- 227 (406)
Q Consensus 166 --~lv~i~~~-~~~tG~~~p----i~~I~~~~~~~g~~~~vD~a-q~~g~~~id~~~~~~--------D~-~~~S~hK~- 227 (406)
T Consensus 177 e~si~iLhaCAhNPTGm-DPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNf 255 (410)
T KOG1412 177 EGSIIILHACAHNPTGM-DPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNF 255 (410)
T ss_pred CCCEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHC
T ss_conf 87378620013698789-97889999999999744760354202101246995410899999996187388776656431
Q ss_pred --CCCCCCCHHH--CCCCC-CCCCEEECCCCEEEEEEECCCCCCCCCH---HCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf --3544431000--25666-3100121145303433202453003310---00001221202456642101233222222
Q gi|254781062|r 228 --YGPSGIGGLY--SKESR-LNEMDPFMGGSEMIADVTQDMVTYADLP---YRFEPGTPPISQAIALGVALDYVEKIDRK 299 (406)
Q Consensus 228 --~Gp~G~G~l~--~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~---~r~e~Gt~~~~~~~al~~al~~~~~~g~~ 299 (406)
T Consensus 256 GlYneR-vGnltvv~~n~a~i~~v~-------SQl~-lviR~~~SNPPAyGArIV~kvL~tP~l---r--e~W~~s--ik 319 (410)
T KOG1412 256 GLYNER-VGNLTVVVNNPAVIAGVK-------SQLT-LVIRSNWSNPPAYGARIVHKVLSTPEL---R--EQWIQS--IK 319 (410)
T ss_pred CCCCCC-CCCEEEEECCHHHHHHHH-------HHHH-HHHHHCCCCCCCHHHHHHHHHHCCHHH---H--HHHHHH--HH
T ss_conf 664655-363699944755777788-------7779-988612678851145899998468888---9--999999--99
Q ss_pred CCCCCCCCCCCCCCCCCCCCC--EE--EECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCC
Q ss_conf 222222222222222222221--01--32268521586799980899999999999878969997521127889972899
Q gi|254781062|r 300 SIFSYERELARYVRSRLKEVR--GM--QLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGID 375 (406)
Q Consensus 300 ~i~~~~~~l~~~l~~~L~~~~--g~--~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~ 375 (406)
T Consensus 320 ~MssRI~~MR~aLrd~L~aL~TPGtWDHI----~~QiGM--FSyTGLtp~qV~~li~~h~vyLl~--------------~ 379 (410)
T KOG1412 320 TMSSRIKKMRTALRDHLVALKTPGTWDHI----TQQIGM--FSYTGLTPAQVDHLIENHKVYLLS--------------D 379 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHH----HHHCCC--EEECCCCHHHHHHHHHHCEEEEEC--------------C
T ss_conf 99999999999999999861899857788----765051--431489989999998736389943--------------8
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 5799993588899999999999999999719
Q gi|254781062|r 376 SLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 376 ~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
T Consensus 380 --GRInisGLN~-~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412 380 --GRINISGLNM-KNVEYVAKAIDETVRAIK 407 (410)
T ss_pred --CCEEEECCCC-CCHHHHHHHHHHHHHHHC
T ss_conf --8376614565-458999999999997523