HHsearch alignment for GI: 254781062 and conserved domain: PRK00854

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed.
Probab=99.81  E-value=5.7e-19  Score=139.20  Aligned_cols=327  Identities=17%  Similarity=0.230  Sum_probs=198.6

Q ss_pred             EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r   24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES   97 (406)
Q Consensus        24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~   97 (406)
T Consensus        44 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~-~~~~---~---~~~~~l~~~l~~~~~~---~~v~f~~SGsEA  113 (404)
T PRK00854         44 RRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTS-RAFR---N---DQLAPLYEELAALTGS---HKVLPMNSGAEA  113 (404)
T ss_pred             CEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCC-CCCC---C---HHHHHHHHHHHHCCCC---CEEEECCCHHHH
T ss_conf             9998826299977542797999999999985678655-5426---5---7999999999740376---848855877999


Q ss_pred             HHHHHHHHHHH-H----HHCCC-CCCCCHHHHHHHHHHCCCCCC----CCCC-----CCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf             76543223444-3----20134-434540110000100001222----2322-----22222222222102578875102
Q gi|254781062|r   98 INLVSYGWGAR-H----ISTGD-EIVLSVMEHHSNIIPWYFLRQ----RRGA-----SLVWVPIDNQGFFHIDEFKNRLT  162 (406)
Q Consensus        98 ~n~~~~~~~~~-~----~~~gd-~Vi~s~~eh~s~~~~~~~~~~----~~G~-----~v~~i~~~~~g~id~~~l~~~i~  162 (406)
T Consensus       114 ve~AiklAr~~~~~~~g~~tgr~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~-----~d~~~l~~~~~  188 (404)
T PRK00854        114 VETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFAPGFRVVPF-----GDAAALEAAIT  188 (404)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC-----CCHHHHHHHHC
T ss_conf             9999999999876503787898559996456678601354346774335688899998155056-----66899998639


Q ss_pred             CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC----CCHHHHCCCCCCCCCCC-CCCC-C
Q ss_conf             33443322222222333333----3210002344443101233200-01110----00011001122234322-2354-4
Q gi|254781062|r  163 ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF----VDVQDIDCDWYIITGHK-LYGP-S  231 (406)
Q Consensus       163 ~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~----id~~~~~~D~~~~S~hK-~~Gp-~  231 (406)
T Consensus       189 ~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDii~~g--Kgl~gG~~  266 (404)
T PRK00854        189 PNTVAFLIEPIQGEAGVIIPPAGYFRRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFY  266 (404)
T ss_pred             CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEC--CCCCCCCC
T ss_conf             8748999917757789617998999999999997076445750001786355741455424897989756--44458876


Q ss_pred             CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             43100025666310012114530343320245300331000001221202456642101233222222222222222222
Q gi|254781062|r  232 GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARY  311 (406)
Q Consensus       232 G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~  311 (406)
T Consensus       267 Pl~av~~~~~i~~~~~~~~h~~-----------T~----------~gnpla~aaa~a~l~~i~~---e~l~~~~~~~g~~  322 (404)
T PRK00854        267 PVSAVLSNSEVLGVLRPGQHGS-----------TF----------GGNPLACAVARAALRVLVE---EGMIENAAEQGAY  322 (404)
T ss_pred             CCCEEECCHHHHHHCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHH
T ss_conf             5320204799995067988778-----------88----------9898999999999999986---5899999999999


Q ss_pred             CCCCCCCCCEEEECCCCCCCCCEEEEEECC--CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHH
Q ss_conf             222222221013226852158679998089--999999999987896999752112788997289957999935888999
Q gi|254781062|r  312 VRSRLKEVRGMQLVNESLEDSPIISFRLGN--IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYE  389 (406)
Q Consensus       312 l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~--~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~e  389 (406)
T Consensus       323 l~~~L~~l~~-~~i~~VRG~Glm~gve~~~~~~~~~~~~~~~~~~Gll~~~~------------~~~~ir~~PPL~it~~  389 (404)
T PRK00854        323 FLEGLRAIRG-NIVREVRGRGLMLAVELEPEAGGARQYCEALKARGLLAKDT------------HDHTIRLAPPLVITRE  389 (404)
T ss_pred             HHHHHHHCCC-CCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHCCEEECCC------------CCCEEEEECCCCCCHH
T ss_conf             9999985048-97276644455999998556677999999999799598748------------9998999799578999


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999999999997
Q gi|254781062|r  390 EADKFIETLKKSIQF  404 (406)
Q Consensus       390 did~~i~~l~~~i~~  404 (406)
T Consensus       390 eid~~l~~l~~~Lah  404 (404)
T PRK00854        390 QVDWAVSQIAKVLAH  404 (404)
T ss_pred             HHHHHHHHHHHHHCC
T ss_conf             999999999999668