HHsearch alignment for GI: 254781062 and conserved domain: PRK04311
>PRK04311 selenocysteine synthase; Provisional.
Probab=99.71 E-value=5.9e-17 Score=126.49 Aligned_cols=339 Identities=19% Similarity=0.253 Sum_probs=197.6
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 41026565786599766888898989999999999861498660267999999999999999999982879765433468
Q gi|254781062|r 13 PILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTR 92 (406)
Q Consensus 13 p~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~ 92 (406)
T Consensus 78 ~~lr~VINaTGvvlHTNLGRapL~~~a~~~v~~~~~~-YsnLE~dL~~G--~RG~R~~~v~~ll~~ltgaE~a---~vVN 151 (465)
T PRK04311 78 SSLRPVINATGVVLHTNLGRALLSEAAIEAVTEAARG-YSNLEYDLATG--KRGSRDRALAALLCELTGAEDA---LVVN 151 (465)
T ss_pred CCCEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHCC-CCHHHHECCCC--CCCCCHHHHHHHHHHHHCCCEE---EEEC
T ss_conf 5641256342057546677777889999999999628-72155220138--8987089999999985498737---9982
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH----HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 7689876543223444320134434540110----000100001222232222222222222102578875102334433
Q gi|254781062|r 93 SATESINLVSYGWGARHISTGDEIVLSVMEH----HSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLI 168 (406)
Q Consensus 93 ~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh----~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv 168 (406)
T Consensus 152 NNAaAv~L~l~~-----la~gkEviVSRGelvEIGGsFRiP--dim~~sGa~L~EVGtTNr--T~l~DY~~AI~~~Ta~l 222 (465)
T PRK04311 152 NNAAAVLLALNA-----LAAGKEVIVSRGELVEIGGAFRIP--DVMRQAGAKLVEVGTTNR--THLRDYEDAINENTALL 222 (465)
T ss_pred CCHHHHHHHHHH-----HHCCCEEEEECCCEEEECCCCCCH--HHHHHCCCEEEECCCCCC--CCHHHHHHHCCCCCEEE
T ss_conf 848999999998-----627985999645356526765627--899865988874376788--88799998649565489
Q ss_pred CCCCCCCC--CCCC--CCCCCEECCCCCCCCCCCCCCCCCC---------CCCCC--CHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 22222222--3333--3332100023444431012332000---------11100--00110011222343222354443
Q gi|254781062|r 169 AITHMSNV--LGTV--IPIKEICRIAHERNIPVLVDGSQGS---------VHNFV--DVQDIDCDWYIITGHKLYGPSGI 233 (406)
Q Consensus 169 ~i~~~~~~--tG~~--~pi~~I~~~~~~~g~~~~vD~aq~~---------g~~~i--d~~~~~~D~~~~S~hK~~Gp~G~ 233 (406)
T Consensus 223 lkvH~SN~~i~GFt~~v~~~eL~~l~~~~~ip~~~DlGSG~l~~~~~~gl~~Ep~v~~~l~~GaDLVtFSGDKLLGGPQA 302 (465)
T PRK04311 223 LKVHTSNYRIVGFTKEVSEAELAALGKEHGLPVVVDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQA 302 (465)
T ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCC
T ss_conf 99956876546746889999999999875992799888752136531269999988999972998899855401479854
Q ss_pred CHHHCCCCCCCCCE--EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCC-CCC--------------CC
Q ss_conf 10002566631001--21145303433202453003310000012212024566421012-332--------------22
Q gi|254781062|r 234 GGLYSKESRLNEMD--PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALD-YVE--------------KI 296 (406)
Q Consensus 234 G~l~~~~~~~~~~~--p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~-~~~--------------~~ 296 (406)
T Consensus 303 GIIvGkk~lI~~lkknPL~R------AlRvDKl-----------------tLaaLeaTL~~Yl~~~~~~~~IP~l~mLt~ 359 (465)
T PRK04311 303 GIIVGKKELIERLKKHPLKR------ALRVDKL-----------------TLAALEATLRLYLNPERLAEKIPTLRLLTR 359 (465)
T ss_pred CEEECHHHHHHHHHHCCCHH------HHCCCHH-----------------HHHHHHHHHHHHHCCCCHHCCCHHHHHHCC
T ss_conf 33740099999998687614------2325999-----------------999999999999592100011768998759
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCC---------CCCCCCE--EEEEECCCCHHHHHHHHHHCC--CEEEECCH
Q ss_conf 2222222222222222222222210132268---------5215867--999808999999999998789--69997521
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEVRGMQLVNE---------SLEDSPI--ISFRLGNIHPYDLALFLDGEG--IAIRAGTH 363 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~---------~~~~~~i--v~~~~~~~~~~~v~~~L~~~g--I~v~~G~~ 363 (406)
T Consensus 360 ~~~~L~~rA~~l~~~l~~~~~~~-~v~i~~~~s~vGGGslP~~~lpS~~v~i~~~~~s~~~L~~~LR~~~~PII~RI~-- 436 (465)
T PRK04311 360 SPEELRARAERLAAALKAALGEF-AVSVVPSFSQVGGGSLPVDRLPSAALTLTPKGRSLEALAARLRLLPPPVIGRIE-- 436 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEE--
T ss_conf 99999999999999987425784-289997766457887878878867999857999999999998369998899998--
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 12788997289957999935888999999999999999997
Q gi|254781062|r 364 CANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 364 ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
T Consensus 437 -----------~d~~~LDlR-Ti~~~d~~~i~~~l~~il~~ 465 (465)
T PRK04311 437 -----------DGRLLLDLR-TLEEEDEEALAAALLELLNK 465 (465)
T ss_pred -----------CCEEEEEEC-CCCHHHHHHHHHHHHHHHHC
T ss_conf -----------897999916-38978999999999999619