HHsearch alignment for GI: 254781062 and conserved domain: PRK04311

>PRK04311 selenocysteine synthase; Provisional.
Probab=99.71  E-value=5.9e-17  Score=126.49  Aligned_cols=339  Identities=19%  Similarity=0.253  Sum_probs=197.6

Q ss_pred             CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             41026565786599766888898989999999999861498660267999999999999999999982879765433468
Q gi|254781062|r   13 PILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTR   92 (406)
Q Consensus        13 p~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~   92 (406)
T Consensus        78 ~~lr~VINaTGvvlHTNLGRapL~~~a~~~v~~~~~~-YsnLE~dL~~G--~RG~R~~~v~~ll~~ltgaE~a---~vVN  151 (465)
T PRK04311         78 SSLRPVINATGVVLHTNLGRALLSEAAIEAVTEAARG-YSNLEYDLATG--KRGSRDRALAALLCELTGAEDA---LVVN  151 (465)
T ss_pred             CCCEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHCC-CCHHHHECCCC--CCCCCHHHHHHHHHHHHCCCEE---EEEC
T ss_conf             5641256342057546677777889999999999628-72155220138--8987089999999985498737---9982


Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH----HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf             7689876543223444320134434540110----000100001222232222222222222102578875102334433
Q gi|254781062|r   93 SATESINLVSYGWGARHISTGDEIVLSVMEH----HSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLI  168 (406)
Q Consensus        93 ~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh----~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv  168 (406)
T Consensus       152 NNAaAv~L~l~~-----la~gkEviVSRGelvEIGGsFRiP--dim~~sGa~L~EVGtTNr--T~l~DY~~AI~~~Ta~l  222 (465)
T PRK04311        152 NNAAAVLLALNA-----LAAGKEVIVSRGELVEIGGAFRIP--DVMRQAGAKLVEVGTTNR--THLRDYEDAINENTALL  222 (465)
T ss_pred             CCHHHHHHHHHH-----HHCCCEEEEECCCEEEECCCCCCH--HHHHHCCCEEEECCCCCC--CCHHHHHHHCCCCCEEE
T ss_conf             848999999998-----627985999645356526765627--899865988874376788--88799998649565489


Q ss_pred             CCCCCCCC--CCCC--CCCCCEECCCCCCCCCCCCCCCCCC---------CCCCC--CHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             22222222--3333--3332100023444431012332000---------11100--00110011222343222354443
Q gi|254781062|r  169 AITHMSNV--LGTV--IPIKEICRIAHERNIPVLVDGSQGS---------VHNFV--DVQDIDCDWYIITGHKLYGPSGI  233 (406)
Q Consensus       169 ~i~~~~~~--tG~~--~pi~~I~~~~~~~g~~~~vD~aq~~---------g~~~i--d~~~~~~D~~~~S~hK~~Gp~G~  233 (406)
T Consensus       223 lkvH~SN~~i~GFt~~v~~~eL~~l~~~~~ip~~~DlGSG~l~~~~~~gl~~Ep~v~~~l~~GaDLVtFSGDKLLGGPQA  302 (465)
T PRK04311        223 LKVHTSNYRIVGFTKEVSEAELAALGKEHGLPVVVDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQA  302 (465)
T ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCC
T ss_conf             99956876546746889999999999875992799888752136531269999988999972998899855401479854


Q ss_pred             CHHHCCCCCCCCCE--EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCC-CCC--------------CC
Q ss_conf             10002566631001--21145303433202453003310000012212024566421012-332--------------22
Q gi|254781062|r  234 GGLYSKESRLNEMD--PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALD-YVE--------------KI  296 (406)
Q Consensus       234 G~l~~~~~~~~~~~--p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~-~~~--------------~~  296 (406)
T Consensus       303 GIIvGkk~lI~~lkknPL~R------AlRvDKl-----------------tLaaLeaTL~~Yl~~~~~~~~IP~l~mLt~  359 (465)
T PRK04311        303 GIIVGKKELIERLKKHPLKR------ALRVDKL-----------------TLAALEATLRLYLNPERLAEKIPTLRLLTR  359 (465)
T ss_pred             CEEECHHHHHHHHHHCCCHH------HHCCCHH-----------------HHHHHHHHHHHHHCCCCHHCCCHHHHHHCC
T ss_conf             33740099999998687614------2325999-----------------999999999999592100011768998759


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCEEEECCC---------CCCCCCE--EEEEECCCCHHHHHHHHHHCC--CEEEECCH
Q ss_conf             2222222222222222222222210132268---------5215867--999808999999999998789--69997521
Q gi|254781062|r  297 DRKSIFSYERELARYVRSRLKEVRGMQLVNE---------SLEDSPI--ISFRLGNIHPYDLALFLDGEG--IAIRAGTH  363 (406)
Q Consensus       297 g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~---------~~~~~~i--v~~~~~~~~~~~v~~~L~~~g--I~v~~G~~  363 (406)
T Consensus       360 ~~~~L~~rA~~l~~~l~~~~~~~-~v~i~~~~s~vGGGslP~~~lpS~~v~i~~~~~s~~~L~~~LR~~~~PII~RI~--  436 (465)
T PRK04311        360 SPEELRARAERLAAALKAALGEF-AVSVVPSFSQVGGGSLPVDRLPSAALTLTPKGRSLEALAARLRLLPPPVIGRIE--  436 (465)
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEE--
T ss_conf             99999999999999987425784-289997766457887878878867999857999999999998369998899998--


Q ss_pred             HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             12788997289957999935888999999999999999997
Q gi|254781062|r  364 CANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF  404 (406)
Q Consensus       364 ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~  404 (406)
T Consensus       437 -----------~d~~~LDlR-Ti~~~d~~~i~~~l~~il~~  465 (465)
T PRK04311        437 -----------DGRLLLDLR-TLEEEDEEALAAALLELLNK  465 (465)
T ss_pred             -----------CCEEEEEEC-CCCHHHHHHHHHHHHHHHHC
T ss_conf             -----------897999916-38978999999999999619