HHsearch alignment for GI: 254781062 and conserved domain: PRK05093
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed.
Probab=99.80 E-value=3.3e-18 Score=134.35 Aligned_cols=330 Identities=13% Similarity=0.127 Sum_probs=196.9
Q ss_pred CEEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 6599766888------8989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
T Consensus 39 G~~ylD~~~g~~~~~lGh~~p~I~~Ai~~Q~~~l~~~~~~~~~~~------~~~lae-~L~~~~---~~drv~f~~SGSE 108 (403)
T PRK05093 39 GREYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEP------ALRLAK-KLVDAT---FAERVFFANSGAE 108 (403)
T ss_pred CCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCCCCCCCCHH------HHHHHH-HHHHCC---CCCEEEEECCHHH
T ss_conf 799999550888503289979999999999875577757414889------999999-986416---8775998386778
Q ss_pred HHHHHHHHHHHHH---HHCC-CCCCCCHHHHHHH-HHHCCCC---CCCCCC-----CCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 8765432234443---2013-4434540110000-1000012---222322-----222222222221025788751023
Q gi|254781062|r 97 SINLVSYGWGARH---ISTG-DEIVLSVMEHHSN-IIPWYFL---RQRRGA-----SLVWVPIDNQGFFHIDEFKNRLTE 163 (406)
Q Consensus 97 ~~n~~~~~~~~~~---~~~g-d~Vi~s~~eh~s~-~~~~~~~---~~~~G~-----~v~~i~~~~~g~id~~~l~~~i~~ 163 (406)
T Consensus 109 AvE~AiklAr~~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~~g~~~~~~~~~p~~~~~~~~p~-----~d~~~l~~~~~~ 183 (403)
T PRK05093 109 ANEAALKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-----NDLAALKAVIDD 183 (403)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCEECCC-----CCHHHHHHCCCC
T ss_conf 999999999999997289987547777588688836877625880110277899977565563-----368888603377
Q ss_pred CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHH--HCCCCCCCCCCC-CCCCCCC
Q ss_conf 3443322222222333333----3210002344443101233200-0111--000011--001122234322-2354443
Q gi|254781062|r 164 RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQD--IDCDWYIITGHK-LYGPSGI 233 (406)
Q Consensus 164 ~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~--~~~D~~~~S~hK-~~Gp~G~ 233 (406)
T Consensus 184 ~iaAviiEPi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~g--KglggG~Pl 261 (403)
T PRK05093 184 KTCAVVVEPIQGEGGVIPATPEFLQGLRELCDKHNALLIFDEVQTGMGRTGDLYAYMHYGVTPDILTSA--KALGGGFPI 261 (403)
T ss_pred CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEC--CCCCCCCCE
T ss_conf 447999957667899758999999999986301683798601342688777752223689899889973--001588642
Q ss_pred CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10002566631001211453034332024530033100000122120245664210123322222222222222222222
Q gi|254781062|r 234 GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVR 313 (406)
Q Consensus 234 G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~ 313 (406)
T Consensus 262 sav~~~~~i~~~~~~~~~g~-----------T~----------~g~pla~aaala~L~~i~~---~~l~~~a~~~G~~l~ 317 (403)
T PRK05093 262 GAMLTTAEIASHFKVGTHGS-----------TY----------GGNPLACAVAEAVFDIINT---PEVLEGVKAREQRFV 317 (403)
T ss_pred EEEEECHHHHHHCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHH
T ss_conf 79987288786507877265-----------89----------8589999999999999963---449999999999999
Q ss_pred CCCCCCC-EEEECCCCCCCCCEEEEEECCC---CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHH
Q ss_conf 2222221-0132268521586799980899---99999999987896999752112788997289957999935888999
Q gi|254781062|r 314 SRLKEVR-GMQLVNESLEDSPIISFRLGNI---HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYE 389 (406)
Q Consensus 314 ~~L~~~~-g~~i~~~~~~~~~iv~~~~~~~---~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~e 389 (406)
T Consensus 318 ~~L~~l~~~~~~i~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~~-----------g-~n~irl~PPL~it~~ 385 (403)
T PRK05093 318 DGLQKINEKYGVFSEIRGKGLLIGAELNEQYKGRARDFLYAAAEEGVMVLVA-----------G-PDVLRFAPSLVIPDA 385 (403)
T ss_pred HHHHHHHHHCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCEEECC-----------C-CCEEEEECCCCCCHH
T ss_conf 9999998628982666541269999965875216999999999689289527-----------9-997999788448999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999971
Q gi|254781062|r 390 EADKFIETLKKSIQFF 405 (406)
Q Consensus 390 did~~i~~l~~~i~~l 405 (406)
T Consensus 386 eid~~l~~l~~al~eV 401 (403)
T PRK05093 386 DIDEGLARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999998