HHsearch alignment for GI: 254781062 and conserved domain: PRK08117
>PRK08117 4-aminobutyrate aminotransferase; Provisional.
Probab=99.76 E-value=4.1e-17 Score=127.49 Aligned_cols=336 Identities=13% Similarity=0.168 Sum_probs=189.0
Q ss_pred EEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 9976688------8898989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 25 IYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 25 iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
T Consensus 42 ~yiD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~-~~~~-~----~~~~~lae~L~~~~p~~-~~~v~f~~sGsEAv 114 (429)
T PRK08117 42 EYLDFTSGIAVLNVGHNHPKVVQAIKEQADRLVHGGS-GVIY-Y----ESILKLAEELAEITPGG-LDMFFFSNSGAEAI 114 (429)
T ss_pred EEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCC-CCCC-C----HHHHHHHHHHHHHCCCC-CCEEEEECCHHHHH
T ss_conf 9999650877534258969999999999863477677-7547-7----69999999999848788-78899948746899
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC-------CCCC---CCCCCCCCC----------CC-C-CCHHHH
Q ss_conf 654322344432013443454011000010000122-------2232---222222222----------22-2-102578
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR-------QRRG---ASLVWVPID----------NQ-G-FFHIDE 156 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~-------~~~G---~~v~~i~~~----------~~-g-~id~~~ 156 (406)
T Consensus 115 e~AiklAr--~~tgr~~ii~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~ 192 (429)
T PRK08117 115 EGALKLAK--HVTKRQGIISFTGAFHGRTLGALSVTTSSSKYRKRYQPLLPSVYHAPYPYCFRCPIGRDPESCSLECLRD 192 (429)
T ss_pred HHHHHHHH--HHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999--8638985999845778886604553167532345778999983663788632565678805668999999
Q ss_pred HHHHCC-----CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHHH--CCCCCCC
Q ss_conf 875102-----33443322222222333333----3210002344443101233200-0111--0000110--0112223
Q gi|254781062|r 157 FKNRLT-----ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQDI--DCDWYII 222 (406)
Q Consensus 157 l~~~i~-----~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~~--~~D~~~~ 222 (406)
T Consensus 193 l~~~~~~~~~~~~iAAviiEPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~~~~gv~PDiv~~ 272 (429)
T PRK08117 193 LESLFKRQIAPEEVAAIIIEPVLGEGGYIVPPKEFLQKVREICDEHGILLIFDEVQSGFGRTGKWFAAETFGVVPDIMTV 272 (429)
T ss_pred HHHHHHHHCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEE
T ss_conf 99999862488878999996466788937388899999999987639179734311077766773265404989987887
Q ss_pred CCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 4322-235444310002566631001211453034332024530033100000122120245664210123322222222
Q gi|254781062|r 223 TGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSI 301 (406)
Q Consensus 223 S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i 301 (406)
T Consensus 273 g--K~lggG~Plsav~~~~~i~~~~~~~~~~~-----------T~----------~gnp~~~aaa~a~L~~~~~---~~l 326 (429)
T PRK08117 273 A--KGIASGFPLSAVVASKELMDQWPLGAHGT-----------TF----------GGNPVACAAALATLEVIKE---EKL 326 (429)
T ss_pred E--ECCCCCCCCCCCCCCHHHHHCCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---CCH
T ss_conf 1--01447898642214799970668888685-----------89----------9898999999999999975---569
Q ss_pred CCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEECC--C--C---HHHHHHHHHHCCCEEEECCHHHHHHHHHCC
Q ss_conf 2222222222222222221-013226852158679998089--9--9---999999998789699975211278899728
Q gi|254781062|r 302 FSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRLGN--I--H---PYDLALFLDGEGIAIRAGTHCANPLLKFLG 373 (406)
Q Consensus 302 ~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~~--~--~---~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g 373 (406)
T Consensus 327 ~~~v~~~g~~l~~~L~~l~~~~p~v~~VRG~Gl~~giel~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g----------~ 396 (429)
T PRK08117 327 LENANNMGAYALERLEKLKEKYPVIGDVRGIGLMIGIEFVDETGEPDGDAVEKILDKCLENGLLLYGCG----------N 396 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC----------C
T ss_conf 999999999999999999971998788522667999999648889469999999999996995898447----------9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99579999358889999999999999999971
Q gi|254781062|r 374 IDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 374 ~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
T Consensus 397 ~~n~i~~~PPL~is~~eid~~~~~l~~al~e~ 428 (429)
T PRK08117 397 DGNVLRFIPPLTVTKEEIDQGLSILDKGLGEY 428 (429)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99989997997799999999999999999976