HHsearch alignment for GI: 254781062 and conserved domain: PRK11658
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional.
Probab=99.92 E-value=7.5e-25 Score=176.26 Aligned_cols=334 Identities=18% Similarity=0.197 Sum_probs=208.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89899999999998614986602679999999999999999999828797654334687689876543223444320134
Q gi|254781062|r 35 KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGD 114 (406)
Q Consensus 35 ~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd 114 (406)
T Consensus 12 ~~~~e~~~v~~~l~sg~~~--~G~-----~v-~~FE---~~~a~~~g~k~---av~v~sgT~AL~lal~al---~i~~gd 74 (379)
T PRK11658 12 MGDEEIAAVKEVLRSGWIT--TGP-----KN-QELE---QAFCQLTGNQH---AIAVSSATAGMHITLMAL---GIGPGD 74 (379)
T ss_pred CCHHHHHHHHHHHHCCCCC--CCH-----HH-HHHH---HHHHHHHCCCE---EEEECCHHHHHHHHHHHC---CCCCCC
T ss_conf 9999999999999669867--887-----79-9999---99999978694---999768899999999986---988839
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf 43454011000010000122223222222222222-21025788751023344332222222233333332100023444
Q gi|254781062|r 115 EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHER 193 (406)
Q Consensus 115 ~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~ 193 (406)
T Consensus 75 eVi~p~~tf~at~~ai~----~~Ga~pvf~Did~~t~~id~~~~e~~it~~tkaIi~Vh~---~G~~~d~~~i~~i~~~~ 147 (379)
T PRK11658 75 EVITPSQTWVSTLNMIV----LLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPVHY---AGAPADLDAIRAIGERY 147 (379)
T ss_pred EEEECCCCHHHHHHHHH----HCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECC---CCCCCCHHHHHHHHHHC
T ss_conf 99989955699999999----819989974574565354889998654826549998568---89866377999999975
Q ss_pred CCCCCCCCCCCCCCCCCC--HHHHCCCCCCCCCCCCCCCCCC-CHHHCCCC-CCCCCEEEC-CCCEEEEEEEC-----CC
Q ss_conf 431012332000111000--0110011222343222354443-10002566-631001211-45303433202-----45
Q gi|254781062|r 194 NIPVLVDGSQGSVHNFVD--VQDIDCDWYIITGHKLYGPSGI-GGLYSKES-RLNEMDPFM-GGSEMIADVTQ-----DM 263 (406)
Q Consensus 194 g~~~~vD~aq~~g~~~id--~~~~~~D~~~~S~hK~~Gp~G~-G~l~~~~~-~~~~~~p~~-~g~~~~~~~~~-----~~ 263 (406)
T Consensus 148 ~i~vIEDaA~a~Ga~~~g~~~Gs~g~a~fSF~~~K~it-tGeGG~ivtnd~~l~~~~r~lr~hG~~~~~~~~~~~g~~~~ 226 (379)
T PRK11658 148 GIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNIT-CAEGGLIVTDDEELADRLRMLKFHGLGVDAYDRQTQGRAPQ 226 (379)
T ss_pred CCEEEECCHHHHCCCCCCCCCCCCCCEEEECCCCCCCC-CCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
T ss_conf 98189708355366547986676244578566666787-77874999699999999999997798865134430378886
Q ss_pred CCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-C--CEEEEEEC
Q ss_conf 30033100000122120245664210123322222222222222222222222222101322685215-8--67999808
Q gi|254781062|r 264 VTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLED-S--PIISFRLG 340 (406)
Q Consensus 264 ~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~-~--~iv~~~~~ 340 (406)
T Consensus 227 ~~~~~~G~N~rm--~elqAAig----l~qL~~--ld~~~~~R~~ia~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (379)
T PRK11658 227 AEVLEPGYKYNL--ADINAAIA----LVQLQK--LEALNARRRAIAAQYLQALAALPFQPLSLPAWPHQHAWHLFIIRVD 298 (379)
T ss_pred CEEEECCCCCCC--CHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 226655613677--77879999----999999--9999999999999999972689986667889887411078999986
Q ss_pred ----CCCHHHHHHHHHHCCCEEEECCHHH----HHHHHHC----CC-------CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf ----9999999999987896999752112----7889972----89-------957999935888999999999999999
Q gi|254781062|r 341 ----NIHPYDLALFLDGEGIAIRAGTHCA----NPLLKFL----GI-------DSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 341 ----~~~~~~v~~~L~~~gI~v~~G~~ca----~~~~~~~----g~-------~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
T Consensus 299 ~~~~~~~Rd~l~~~L~~~gI~t~~--~y~p~h~~~~~~~~~~~~~lpnae~~~~~~lsLP~~~~Lt~~di~~Ii~~ik~i 376 (379)
T PRK11658 299 EERCGISRDALMEALKERGIGTGL--HFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDSDVDRVITALQQI 376 (379)
T ss_pred HHHCCCCHHHHHHHHHHCCCCEEE--ECCCCCCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 463544899999999977998120--274200489888159878998999998488989899897999999999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254781062|r 402 IQ 403 (406)
Q Consensus 402 i~ 403 (406)
T Consensus 377 ~~ 378 (379)
T PRK11658 377 AG 378 (379)
T ss_pred HC
T ss_conf 77