HHsearch alignment for GI: 254781062 and conserved domain: PRK13520
>PRK13520 L-tyrosine decarboxylase; Provisional.
Probab=100.00 E-value=1.2e-34 Score=237.97 Aligned_cols=328 Identities=19% Similarity=0.209 Sum_probs=239.5
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 89898999999999986149866026799999999999999999998287976543346876898765432234443201
Q gi|254781062|r 33 AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHIST 112 (406)
Q Consensus 33 ~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~ 112 (406)
T Consensus 34 ~~~~~~a~~a~~~~~~~N~~~~--~~~P~~~~---mE~~vv~~~a~l~g~p~~-~G~~tsGGTes~l~Al~aa--R~~~~ 105 (375)
T PRK13520 34 TKPHPIAREAHEMFLETNLGDP--GLFPGTAK---LEREVVRMLGELLHLPDA-YGYITSGGTEANIQAVRAA--RNLAD 105 (375)
T ss_pred CCCHHHHHHHHHHHHHHCCCCC--CCCHHHHH---HHHHHHHHHHHHCCCCCC-EEEEECHHHHHHHHHHHHH--HHHCC
T ss_conf 7834999999999996178985--33877999---999999999998099988-0899561899999999999--76268
Q ss_pred C--CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 3--44345401100001000012222322222222222221025788751023344332222222233333332100023
Q gi|254781062|r 113 G--DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIA 190 (406)
Q Consensus 113 g--d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~ 190 (406)
T Consensus 106 ~~~p~iv~~~~aH~s----~~Kaa~~~gi~~~~vp~d~~~~~d~~~l~~~i~~~ti~vvatagtt~~G~iDpi~~i~~i~ 181 (375)
T PRK13520 106 AEKPNIVVPESAHFS----FDKAADMLGLELRRAPLDEDYRVDVKSVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIA 181 (375)
T ss_pred CCCCEEEEECCCHHH----HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCEEECCHHHHHHHH
T ss_conf 999879996731699----9999997495569940388886989999998864957999925887882235999999999
Q ss_pred CCCCCCCCCCCCCCCCCC-------CCCHHHHCCCCCCCCCCCC-CCCCCCCHHHCCCCC-CCCCE---EECCCCEEEEE
Q ss_conf 444431012332000111-------0000110011222343222-354443100025666-31001---21145303433
Q gi|254781062|r 191 HERNIPVLVDGSQGSVHN-------FVDVQDIDCDWYIITGHKL-YGPSGIGGLYSKESR-LNEMD---PFMGGSEMIAD 258 (406)
Q Consensus 191 ~~~g~~~~vD~aq~~g~~-------~id~~~~~~D~~~~S~hK~-~Gp~G~G~l~~~~~~-~~~~~---p~~~g~~~~~~ 258 (406)
T Consensus 182 ~~~~i~lHVDaa~GGf~~pf~~~~~~~df~l~~vdSIs~d~HK~g~~p~g~g~vl~r~~~~~~~~~~~~~Yl~~~~~--- 258 (375)
T PRK13520 182 LENDIFLHVDAAFGGFVIPFLDDPYDFDFSLPGVSSITIDPHKMGLAPIPAGGILFRDPEFLDALDVDTPYLTSKKQ--- 258 (375)
T ss_pred HHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHCCCCC---
T ss_conf 97597499862552022112576640004778802642461113651577159998788999872467714358987---
Q ss_pred EECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE
Q ss_conf 20245300331000001221202456642101233222222222222222222222222221013226852158679998
Q gi|254781062|r 259 VTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFR 338 (406)
Q Consensus 259 ~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~ 338 (406)
T Consensus 259 ~t-------------l~gSR~g~~~~~~Wa~l~~~G~~Gy~~~~~~~~~~a~~la~~l~~~-g~e~~~~P--~~~iV~Fr 322 (375)
T PRK13520 259 AT-------------LTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRYLVEELEKL-GFEPVIEP--VLNIVAFD 322 (375)
T ss_pred EE-------------EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCC--CCEEEEEE
T ss_conf 35-------------6058877559999999999739999999999999999999999867-99897089--81399995
Q ss_pred ECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 089999999999987896999752112788997289957999935888999999999999999997
Q gi|254781062|r 339 LGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 339 ~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
T Consensus 323 ~~--~~~~l~d~l~~~GW~v~~-----------~~~P~~lhivv~~~~~~~~id~fl~DL~e~~~~ 375 (375)
T PRK13520 323 DP--NPHEVRKKLRERGWRVSV-----------TRCPEALRIVVMPHVTREHIEAFLEDLDEVKKR 375 (375)
T ss_pred CC--CHHHHHHHHHHCCCEECC-----------CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 79--999999999976987457-----------889984899995999989999999999999529