>TIGR00700 GABAtrnsam 4-aminobutyrate transaminase; InterPro: IPR004632 Eukaryotic 4-aminobutyrate aminotransferase (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between, in either set, the most similar enzyme with a distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. Escherichia coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.

Probab=98.14 E-value=1.9e-05 Score=53.91 Aligned_cols=325 Identities=14% Similarity=0.193 Sum_probs=171.8 Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 898989999999999861498660267999999999999999999982879-7654334687689876543223444320 Q gi|254781062|r 33 AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINAS-SVKEIIFTRSATESINLVSYGWGARHIS 111 (406) Q Consensus 33 ~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~-~~~~v~ft~~~Te~~n~~~~~~~~~~~~ 111 (406) T Consensus 48 GhshP~vV~AV~~Q~~ef---~Ht~f~v~pYe~---Yv~lAEkln~iaPgSg~kk~~ffn-sGAEAVENAVKIAR~yTgr 120 (427) T TIGR00700 48 GHSHPKVVEAVKRQVEEF---THTAFQVVPYES---YVELAEKLNAIAPGSGEKKAVFFN-SGAEAVENAVKIARKYTGR 120 (427) T ss_pred CCCCHHHHHHHHHHHHHH---CCCCCEEECCHH---HHHHHHHHCCCCCCCCCHHEEEEC-CCHHHHHHHHHHHHHHCCC T ss_conf 898735899999999974---388534521625---899999971578897310002111-5437888899999874589 Q ss_pred CCCCCCCCHHHHHHH-HHHCCCCCC----CCCC-----CCCCCCCCCC---C----CCHHH-----HHHH------HCCC Q ss_conf 134434540110000-100001222----2322-----2222222222---2----10257-----8875------1023 Q gi|254781062|r 112 TGDEIVLSVMEHHSN-IIPWYFLRQ----RRGA-----SLVWVPIDNQ---G----FFHID-----EFKN------RLTE 163 (406) Q Consensus 112 ~gd~Vi~s~~eh~s~-~~~~~~~~~----~~G~-----~v~~i~~~~~---g----~id~~-----~l~~------~i~~ 163 (406) T Consensus 121 p--gVvaF~~gfHGRTnmTMalT~Kv~PYK~GFGPFapevY~aP~py~y~~~~~~~q~s~d~m~~~A~~~~f~~dkqv~a 198 (427) T TIGR00700 121 P--GVVAFDRGFHGRTNMTMALTAKVKPYKIGFGPFAPEVYRAPYPYDYRDIALDKQESLDDMVLAAIEALFVADKQVEA 198 (427) T ss_pred C--CEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC T ss_conf 6--16863687466126788765227873457888674521168872002433442222003899999983121033250 Q ss_pred CC-CCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCC----CC----CCCCHHHHCCCCCCCCCCC-CCC Q ss_conf 34-43322222222333333----32100023444431012332000----11----1000011001122234322-235 Q gi|254781062|r 164 RT-KLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGS----VH----NFVDVQDIDCDWYIITGHK-LYG 229 (406) Q Consensus 164 ~t-~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~----g~----~~id~~~~~~D~~~~S~hK-~~G 229 (406) T Consensus 199 ~~vAa~v~EPvQGEGGFivp~k~fv~a~~~~C~ehgiVfiADEvQtGFARTG~~FA~eH~~~dGl~PDLit~a--KslA~ 276 (427) T TIGR00700 199 ENVAAVVIEPVQGEGGFIVPAKEFVAAVLDLCKEHGIVFIADEVQTGFARTGKLFAIEHYDDDGLKPDLITVA--KSLAD 276 (427) T ss_pred CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCEEEEECCCCCCCCCHHHHH--HHHHC T ss_conf 1043789732247887333858899999997543875899725456800002112541006788875188786--67735 Q ss_pred CCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC Q ss_conf 44431000256663100121145303433202453003310000012212024566421012332222222222222222 Q gi|254781062|r 230 PSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELA 309 (406) Q Consensus 230 p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~ 309 (406) T Consensus 277 GlPLSgV~GrAeimdApapGgLGGTy-------------------aGn--PlacAAAlAvl~iIe~---egL~ERa~qig 332 (427) T TIGR00700 277 GLPLSGVVGRAEIMDAPAPGGLGGTY-------------------AGN--PLACAAALAVLDIIEE---EGLIERAEQIG 332 (427) T ss_pred CCCCCHHHCCHHHCCCCCCCCCCCCC-------------------CCC--HHHHHHHHHHHHHHCC---CCHHHHHHHHH T ss_conf 68621110441211688888887755-------------------688--7999999999986311---31247899987 Q ss_pred CCCCCCCCCCCE-EEECCCCCCCCCEEEEEEC-CC---C-----HHHHHHHHHHCCCEEEECCHHHHHHHHHCCC-CCEE Q ss_conf 222222222210-1322685215867999808-99---9-----9999999987896999752112788997289-9579 Q gi|254781062|r 310 RYVRSRLKEVRG-MQLVNESLEDSPIISFRLG-NI---H-----PYDLALFLDGEGIAIRAGTHCANPLLKFLGI-DSLC 378 (406) Q Consensus 310 ~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~-~~---~-----~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~-~~~i 378 (406) T Consensus 333 ~~~~d~l~~~k~~~p~IgdvRglGaMiAvE~vkdp~T~EPda~~a~~ia~~A~a~GlllLT-----------cG~~GNiI 401 (427) T TIGR00700 333 KLVKDKLIELKEEVPAIGDVRGLGAMIAVELVKDPDTTEPDAALAEKIAAAALAAGLLLLT-----------CGIYGNII 401 (427) T ss_pred HHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHH-----------CCHHCCHH T ss_conf 8898888888760672111202633578886548878883179999999999756822123-----------03011555 Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHH Q ss_conf 9993588899999999999999999 Q gi|254781062|r 379 RASLAMYNTYEEADKFIETLKKSIQ 403 (406) Q Consensus 379 RiS~~~~nt~edid~~i~~l~~~i~ 403 (406) T Consensus 402 RfL~PLtI~D~ll~egl~Il~a~L~ 426 (427) T TIGR00700 402 RFLTPLTISDELLDEGLDILEAALA 426 (427) T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHC T ss_conf 4348865467889889999999852

HHsearch alignment for GI: 254781062 and conserved domain: TIGR00700