HHsearch alignment for GI: 254781062 and conserved domain: TIGR00707

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases; InterPro: IPR004636 This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from Escherichia coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (2.6.1.11 from EC), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism . Members of this family may also act on ornithine, like ornithine aminotransferase (2.6.1.13 from EC) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (2.6.1.17 from EC, DapC, an enzyme of lysine biosynthesis) . ; GO: 0008483 transaminase activity, 0006525 arginine metabolic process.
Probab=99.81  E-value=4.4e-19  Score=139.88  Aligned_cols=330  Identities=17%  Similarity=0.235  Sum_probs=220.8

Q ss_pred             CCCEEEEECC------CCCCCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCC----CCCCCC
Q ss_conf             7865997668------888989899999999998614986602-67999999999999999999982879----765433
Q gi|254781062|r   21 KKPLIYFDNA------ASAQKPQDVIDSIMCTYSHEYANIHRG-LHYMANAVTDKYEKARDKVRRFINAS----SVKEII   89 (406)
Q Consensus        21 ~~~~iYld~a------~~~~~~~~V~~a~~~~~~~~~~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~----~~~~v~   89 (406)
T Consensus        26 ~~GK~YlDf~aGIAV~~LGH~hP~l~Ea~~~Q~~kL~---H~SNlY~~~~~-----~~LA~kLv~~~~~dgGqhd~~rvF   97 (402)
T TIGR00707        26 VNGKEYLDFVAGIAVNALGHAHPKLVEALKEQLEKLV---HVSNLYYTEPQ-----EELAEKLVEHSGADGGQHDASRVF   97 (402)
T ss_pred             CCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHE---EECCCCCCCHH-----HHHHHHHHHHHHCCCCCCCCCEEE
T ss_conf             7894652010022440113578899999998662406---60776558089-----999999999970468830232667


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHH----CCCCCCCCHHHHHH-----HHHHCCCCCCCCCCC-----CCCCCCCCCCCCH-H
Q ss_conf             4687689876543223444320----13443454011000-----010000122223222-----2222222222102-5
Q gi|254781062|r   90 FTRSATESINLVSYGWGARHIS----TGDEIVLSVMEHHS-----NIIPWYFLRQRRGAS-----LVWVPIDNQGFFH-I  154 (406)
Q Consensus        90 ft~~~Te~~n~~~~~~~~~~~~----~gd~Vi~s~~eh~s-----~~~~~~~~~~~~G~~-----v~~i~~~~~g~id-~  154 (406)
T Consensus        98 FCNSGaEAnEAAlKlA-Rk~~~~~g~~k~~ivaf~naFHGRT~g~LsaTgqpKy-~~~F~PLvpgf~y~~yN-----De~  170 (402)
T TIGR00707        98 FCNSGAEANEAALKLA-RKYTGDKGKEKKKIVAFENAFHGRTMGALSATGQPKY-QKPFEPLVPGFKYVPYN-----DEI  170 (402)
T ss_pred             EECCHHHHHHHHHHHH-HHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCC-CCCCCCCCCCCEEECCC-----CCH
T ss_conf             5147478999999998-9864022788653888870776300454300477645-68578842381244488-----978


Q ss_pred             HHHHHHCCCC-----CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCH--HHHCCC
Q ss_conf             7887510233-----443322222222333333----3210002344443101233200-0111----0000--110011
Q gi|254781062|r  155 DEFKNRLTER-----TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDV--QDIDCD  218 (406)
Q Consensus       155 ~~l~~~i~~~-----t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~--~~~~~D  218 (406)
T Consensus       171 ~~l~~~i~~~~eg~rtAAvivEpiQGEgGV~pa~~~fL~a~r~lc~~~~~LLI~DEVQtG~GRTG~~fA~~Hygse~~PD  250 (402)
T TIGR00707       171 EALKEAIDDEKEGDRTAAVIVEPIQGEGGVVPADKEFLKALRELCEDKDALLIFDEVQTGLGRTGKLFAYEHYGSEVEPD  250 (402)
T ss_pred             HHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCCH
T ss_conf             99999850257787188999853217865334877899999999864891899944752877433223312068845523


Q ss_pred             CCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             22234322-23544431000256663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r  219 WYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID  297 (406)
Q Consensus       219 ~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g  297 (406)
T Consensus       251 i~T~A--KgLGgG~PiGA~~~~e~~a~~~~~G~HGsT-----------F--------GG--NPLAc~Aa~~vl~~i~~--  305 (402)
T TIGR00707       251 IITLA--KGLGGGVPIGAVLAKEEVAEALTPGDHGST-----------F--------GG--NPLACAAALAVLEVIEK--  305 (402)
T ss_pred             HHHHH--HHHHCCCHHHHHEEHHHHHHHCCCCCCCCC-----------C--------CC--CHHHHHHHHHHHHHHHC--
T ss_conf             87540--555278202232023678731589898666-----------7--------87--38999998776665505--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEEE-CCCCCCCCC-EEEEEECC--CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCC
Q ss_conf             222222222222222222222210132-268521586-79998089--99999999998789699975211278899728
Q gi|254781062|r  298 RKSIFSYERELARYVRSRLKEVRGMQL-VNESLEDSP-IISFRLGN--IHPYDLALFLDGEGIAIRAGTHCANPLLKFLG  373 (406)
Q Consensus       298 ~~~i~~~~~~l~~~l~~~L~~~~g~~i-~~~~~~~~~-iv~~~~~~--~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g  373 (406)
T Consensus       306 -~~~l~~v~~~G~~f~~~L~~~~~~~~~l~k~VRG~GLmlG~e~~~~~~~a~~~~~~a~~~GlLv~~----Ag-------  373 (402)
T TIGR00707       306 -ERLLEKVKEKGDYFKERLEELIKKYIDLIKEVRGKGLMLGIELEAPSVAAKDIVKEAREKGLLVNT----AG-------  373 (402)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEC----CC-------
T ss_conf             -104789999889999999986177667401532312346556427865589999999848926881----78-------


Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf             995799993588899999999999999999
Q gi|254781062|r  374 IDSLCRASLAMYNTYEEADKFIETLKKSIQ  403 (406)
Q Consensus       374 ~~~~iRiS~~~~nt~edid~~i~~l~~~i~  403 (406)
T Consensus       374 -~~v~Rf~PPL~i~~e~i~~~~~~l~~~~~  402 (402)
T TIGR00707       374 -PKVLRFVPPLIITEEEIDEAVDALEEAIE  402 (402)
T ss_pred             -CCEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf             -87066157864458899999999999829