HHsearch alignment for GI: 254781062 and conserved domain: TIGR01140

>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860 L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=99.55  E-value=1.2e-14  Score=111.91  Aligned_cols=316  Identities=18%  Similarity=0.224  Sum_probs=206.1

Q ss_pred             EEECCCC-CC--CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             9766888-89--89899999999998614986602679999999999999999999828797654334687689876543
Q gi|254781062|r   26 YFDNAAS-AQ--KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVS  102 (406)
Q Consensus        26 Yld~a~~-~~--~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~  102 (406)
T Consensus         7 lLDFsAninPlgpP~S~~aa~~~aLd~~~rYPD~--dY---------~hlrqA~AdH~q~~-~dwvl~gnG~~e~i~la~   74 (349)
T TIGR01140         7 LLDFSANINPLGPPASVKAALAAALDALERYPDD--DY---------IHLRQALADHHQVA-ADWVLAGNGELESIRLAA   74 (349)
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC--CH---------HHHHHHHHHHHCCC-CCCEECCCCCHHHHHHHH
T ss_conf             0324345788887602045898742787608884--31---------89999986541256-012545997278889988


Q ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC--C-CCC-CC--HHHH--HHHHCCCCCCCCCCCCCC
Q ss_conf             22344432013443454011000010000122223222222222--2-222-10--2578--875102334433222222
Q gi|254781062|r  103 YGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI--D-NQG-FF--HIDE--FKNRLTERTKLIAITHMS  174 (406)
Q Consensus       103 ~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~--~-~~g-~i--d~~~--l~~~i~~~t~lv~i~~~~  174 (406)
T Consensus        75 ~t~----~~~Gd~~~V~~---P~-F~eYgR~~~~~Gae~~ti~w~~~~~~~W~~~~dPseiA~l~A~~s~h~~lilctPn  146 (349)
T TIGR01140        75 ETL----VSRGDAVLVVA---PA-FAEYGRELELAGAELKTIRWSLDEADGWRVLRDPSEIALLDAVTSEHDLLILCTPN  146 (349)
T ss_pred             HHC----CCCCCEEEEEC---CC-CHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCC
T ss_conf             614----78887578708---87-02679999856981223457731688874557645665412688331353111767


Q ss_pred             CCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCCCCCC--------CHHHHCCCCCCC-CCCCCCCCCC--CCHHHCCC
Q ss_conf             22333333---3210002344443101233200011100--------001100112223-4322235444--31000256
Q gi|254781062|r  175 NVLGTVIP---IKEICRIAHERNIPVLVDGSQGSVHNFV--------DVQDIDCDWYII-TGHKLYGPSG--IGGLYSKE  240 (406)
Q Consensus       175 ~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g~~~i--------d~~~~~~D~~~~-S~hK~~Gp~G--~G~l~~~~  240 (406)
T Consensus       147 NPtG~l~~r~~l~A~a~rc~~~N~~LllDEA-F~dF~pPG~E~~l~p~l~~-~P~~~vlRSLTKfy~lPGLRlGylva~~  224 (349)
T TIGR01140       147 NPTGDLLERDALRALADRCKAVNIELLLDEA-FLDFLPPGEETSLVPSLKD-TPNVVVLRSLTKFYALPGLRLGYLVAVD  224 (349)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCHHHC-CCCEEEECCHHHHHCCHHHHHHHHHCCC
T ss_conf             6989862247899999888874046666556-5157898644343413326-8978997111554025024454555166


Q ss_pred             C-CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             6-631001211453034332024530033100000122120245664210123322222222222222222222222222
Q gi|254781062|r  241 S-RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV  319 (406)
Q Consensus       241 ~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~  319 (406)
T Consensus       225 Da~la~~r~~r-----------------------~pW~vnalAaaag~~al~--~sef~q~tw~wl~~erar~~qaL~~l  279 (349)
T TIGR01140       225 DALLARLRAAR-----------------------RPWSVNALAAAAGAAALR--DSEFRQETWRWLAEERARLRQALADL  279 (349)
T ss_pred             HHHHHHHHHHC-----------------------CCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             17899999742-----------------------899877689999999876--67899999874366778999999717


Q ss_pred             CEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCC-EEEEEECCCCCHHHHHHHHHHH
Q ss_conf             101322685215867999808999999999998789699975211278899728995-7999935888999999999999
Q gi|254781062|r  320 RGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDS-LCRASLAMYNTYEEADKFIETL  398 (406)
Q Consensus       320 ~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~-~iRiS~~~~nt~edid~~i~~l  398 (406)
T Consensus       280 P~l~v~Ps~---anfLLl~~~~~~~dl~~~llt~~~IliRdc-------~~fpgLds~~~RVAvR---t~a~N~rLlaAL  346 (349)
T TIGR01140       280 PLLDVYPSR---ANFLLLKVEREDVDLQEELLTKERILIRDC-------LSFPGLDSDYYRVAVR---TAAENDRLLAAL  346 (349)
T ss_pred             CCCCCCCCC---CCCEEEECCCCCHHHHHHHHHHCCCCHHHC-------CCCCCCCCCEEEEEEC---CHHHHHHHHHHH
T ss_conf             887558888---761145458986889999987434100120-------5788888752788852---855478999996


Q ss_pred             HHH
Q ss_conf             999
Q gi|254781062|r  399 KKS  401 (406)
Q Consensus       399 ~~~  401 (406)
T Consensus       347 a~v  349 (349)
T TIGR01140       347 ADV  349 (349)
T ss_pred             HCC
T ss_conf             139