HHsearch alignment for GI: 254781062 and conserved domain: TIGR01885
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=99.67 E-value=7.4e-16 Score=119.55 Aligned_cols=330 Identities=16% Similarity=0.241 Sum_probs=219.9
Q ss_pred CEEEEEC----CCC--CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 6599766----888--8989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDN----AAS--AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~----a~~--~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
T Consensus 41 G~~Y~D~LSaYSavNqGHchP~i~~Al~~Q~~KlTL-~Sraf~------nd~lg~~~~~~t~LfgGk~-~~vL~mNTGaE 112 (426)
T TIGR01885 41 GREYLDFLSAYSAVNQGHCHPKIVNALKNQADKLTL-TSRAFH------NDVLGEFAKYLTKLFGGKY-EKVLPMNTGAE 112 (426)
T ss_pred CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-HHHHHH------CCHHHHHHHHHHHHCCCCC-CEEECCCCCHH
T ss_conf 888641002554401376771689999999851371-027660------6035789999997549951-05604568734
Q ss_pred HHHHHHHHHHHH-----HHHCCC-CCCCCHHHHHHH-HHHCCCCCC---------------CCCCCCCCCCCCCCCCCHH
Q ss_conf 876543223444-----320134-434540110000-100001222---------------2322222222222221025
Q gi|254781062|r 97 SINLVSYGWGAR-----HISTGD-EIVLSVMEHHSN-IIPWYFLRQ---------------RRGASLVWVPIDNQGFFHI 154 (406)
Q Consensus 97 ~~n~~~~~~~~~-----~~~~gd-~Vi~s~~eh~s~-~~~~~~~~~---------------~~G~~v~~i~~~~~g~id~ 154 (406)
T Consensus 113 AvEtA~KLAR~WgY~~K~ip~~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnvasGhgf~~iPYg-----d~ 187 (426)
T TIGR01885 113 AVETALKLARKWGYEVKGIPRNKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNVASGHGFRKIPYG-----DL 187 (426)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC-----CH
T ss_conf 7999999999744135785576238998538873303544320267212006787967743357852115588-----87
Q ss_pred HHHHHHCC-C-----CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CC----CCCCCHHH--HCC
Q ss_conf 78875102-3-----3443322222222333333----3210002344443101233200-01----11000011--001
Q gi|254781062|r 155 DEFKNRLT-E-----RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SV----HNFVDVQD--IDC 217 (406)
Q Consensus 155 ~~l~~~i~-~-----~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g----~~~id~~~--~~~ 217 (406)
T Consensus 188 EAl~~aL~~P~~~GDnVAA~i~EPIQGEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQTGlGRTGk~la~dh~~aev~P 267 (426)
T TIGR01885 188 EALRKALQDPKKTGDNVAAFILEPIQGEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQTGLGRTGKLLACDHENAEVKP 267 (426)
T ss_pred HHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEECC
T ss_conf 89999972757788868999950403544368489635789999865518728982000384025453310105882045
Q ss_pred CCCCCCCCC-CCCC-CCCCHHHCCCCCCCCCEEE--CCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 122234322-2354-4431000256663100121--14530343320245300331000001221202456642101233
Q gi|254781062|r 218 DWYIITGHK-LYGP-SGIGGLYSKESRLNEMDPF--MGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYV 293 (406)
Q Consensus 218 D~~~~S~hK-~~Gp-~G~G~l~~~~~~~~~~~p~--~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~ 293 (406)
T Consensus 268 Di~lLG--KALsGGv~PiSa~la~~dim~vl~PGPF~HGS-----------Tf---------GG-NPLAcavaiAaLeVL 324 (426)
T TIGR01885 268 DIVLLG--KALSGGVYPISAVLADDDIMSVLKPGPFEHGS-----------TF---------GG-NPLACAVAIAALEVL 324 (426)
T ss_pred CCEEEE--HHHCCCCCCEEEEEECCCEEECCCCCCCCCCC-----------CC---------CC-CHHHHHHHHHHHHHH
T ss_conf 033511--23458946224366646401211764865677-----------68---------87-578999999999987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC-EEE-ECCCCCCCCCEEEEEEC-----CCCHHHHHHHHHHCCCEEEECCHHHH
Q ss_conf 222222222222222222222222221-013-22685215867999808-----99999999999878969997521127
Q gi|254781062|r 294 EKIDRKSIFSYERELARYVRSRLKEVR-GMQ-LVNESLEDSPIISFRLG-----NIHPYDLALFLDGEGIAIRAGTHCAN 366 (406)
Q Consensus 294 ~~~g~~~i~~~~~~l~~~l~~~L~~~~-g~~-i~~~~~~~~~iv~~~~~-----~~~~~~v~~~L~~~gI~v~~G~~ca~ 366 (406)
T Consensus 325 ~~---ekL~~~A~~lG~~f~~~L~~l~~~S~dvv~EVRGkGLL~AIe~~~~ka~~~~~w~~Cl~~k~~GLlak~~----- 396 (426)
T TIGR01885 325 EE---EKLAERADQLGDMFLDELKQLARESPDVVKEVRGKGLLIAIEFKENKADEIGAWDVCLRLKENGLLAKPT----- 396 (426)
T ss_pred HC---CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEECCC-----
T ss_conf 40---4506889883289999999887507640001156721688885065333264668878852074210133-----
Q ss_pred HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 889972899579999358889999999999999999
Q gi|254781062|r 367 PLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 367 ~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
T Consensus 397 ------nhd~~IR~aPPL~i~~E~L~~~ie~i~K~~ 426 (426)
T TIGR01885 397 ------NHDKIIRLAPPLVITKEQLDEVIEIIRKTL 426 (426)
T ss_pred ------CCCCEEEECCCCCCCHHHHHHHHHHHHHCC
T ss_conf ------587068717885263899999999986049