HHsearch alignment for GI: 254781062 and conserved domain: TIGR02006
>TIGR02006 IscS cysteine desulfurase IscS; InterPro: IPR010240 This entry represents cysteine deusulphurase (IscS), one of several cysteine desulphurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulphur cluster assembly.; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=100.00 E-value=0 Score=389.71 Aligned_cols=363 Identities=25% Similarity=0.409 Sum_probs=324.1
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99766888898989999999999861--4986602679999999999999999999828797654334687689876543
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHE--YANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVS 102 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~--~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~ 102 (406)
T Consensus 5 ~yldy~~t~P~~~~v~~~m~~~~~~~g~fGnP~s~sh~fGW~a~~~v~~ar~~~~~~~~~d~-~ei~ftsGate~~nl~i 83 (404)
T TIGR02006 5 IYLDYAATTPVDKRVAEKMLEYLTEKGNFGNPASRSHKFGWEAEEAVENARNEVAELIGADS-REIVFTSGATESDNLAI 83 (404)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHH
T ss_conf 36401356864589999999988741566886423433453068899999999999845887-40787237753024788
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22344432013443454011000010000122223222222222222210257887510233443322222222333333
Q gi|254781062|r 103 YGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIP 182 (406)
Q Consensus 103 ~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p 182 (406)
T Consensus 84 ~G~a~fy~~k~~h~it~~~ehk~vl~~~r~l-e~~G~~vtyl~~~~~G~~~~~~l~~~~~~~t~lvs~m~vnne~G~~~~ 162 (404)
T TIGR02006 84 KGVAKFYKSKGKHIITSKTEHKAVLDTCREL-EREGFEVTYLEVKEDGLIDLEELKAAIRDDTILVSVMAVNNEIGVIQD 162 (404)
T ss_pred HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH-HHCCCEEEEEECCCCCCEEHHHHHHHHHCCEEEEEEEEECCCCCHHHH
T ss_conf 8899997423766786400367899999988-757816898501456621089999874127057875531144330465
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECC
Q ss_conf 32100023444431012332000111000011001122234322235444310002566631001211453034332024
Q gi|254781062|r 183 IKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQD 262 (406)
Q Consensus 183 i~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~ 262 (406)
T Consensus 163 ~~~i~~~~r~~~~~fh~d~~q~~Gk~~~~~~~~~~dl~s~s~hk~yGPkGiGalyv~~~Prvr~~~~~~GGG~------- 235 (404)
T TIGR02006 163 IAAIGELCRERKVLFHVDAAQSVGKIPIDVEELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEALIHGGGH------- 235 (404)
T ss_pred HHHHHHHHHHCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCC-------
T ss_conf 8899987630441476400013451134353431012100123102675521245512773355200048874-------
Q ss_pred CCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC-CEEEEEECC
Q ss_conf 5300331000001221202456642101233222222222222222222222222221013226852158-679998089
Q gi|254781062|r 263 MVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDS-PIISFRLGN 341 (406)
Q Consensus 263 ~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~-~iv~~~~~~ 341 (406)
T Consensus 236 -------erG~r~Gtl~~~~ivG~G~~~~~a~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~~~~~~ln~sf~~ 307 (404)
T TIGR02006 236 -------ERGMRSGTLPTHQIVGLGEAFRIAKE-ELAKDTARVLKLRDRLLNGIESIEEVYLNGDLEQRVKGNLNVSFNY 307 (404)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEE
T ss_conf -------35410244320143210167899999-9988899999999999998744565331211443112221012220
Q ss_pred CCHHHHHHHHHHCCCEEEECCHHHH------HHHHHCCCC-----CEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999878969997521127------889972899-----5799993588899999999999999999719
Q gi|254781062|r 342 IHPYDLALFLDGEGIAIRAGTHCAN------PLLKFLGID-----SLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 342 ~~~~~v~~~L~~~gI~v~~G~~ca~------~~~~~~g~~-----~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
T Consensus 308 veGesl~~a~--~~~avssGsaCts~slePsyvlr~lG~~~elah~s~r~~~Gr~tt~~e~~~~~~~v~~~~~~lr 381 (404)
T TIGR02006 308 VEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRFTTEEEIDYAVKLVKSAVDKLR 381 (404)
T ss_pred ECHHHHHHHH--HHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 0204788888--8875305641001335355788760642012232221001112107899999999999999886