>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

Probab=99.92 E-value=1.5e-24 Score=174.43 Aligned_cols=333 Identities=18% Similarity=0.244 Sum_probs=210.2 Q ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC Q ss_conf 89899999999998614986602679999999999999999999828797654334687689876543223444320134 Q gi|254781062|r 35 KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGD 114 (406) Q Consensus 35 ~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd 114 (406) T Consensus 8 i~~~e~~~v~~~l~s~~~~~--G~~---------v~~fE~~~~~~~g~k~---~v~~~sgT~AL~lal~al---~~~~gd 70 (380) T TIGR03588 8 IDQDDIDAVVEVLKSDFLTQ--GPT---------VPAFEEALAEYVGAKY---AVAFNSATSALHIACLAL---GVGPGD 70 (380) T ss_pred CCHHHHHHHHHHHHCCCCCC--CHH---------HHHHHHHHHHHHCCCE---EEEECCHHHHHHHHHHHC---CCCCCC T ss_conf 99999999999984798668--976---------9999999999978594---999758899999999984---999989 Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCCCCEECC Q ss_conf 43454011000010000122223222222222222-2102578875102----334433222222223333333210002 Q gi|254781062|r 115 EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFKNRLT----ERTKLIAITHMSNVLGTVIPIKEICRI 189 (406) Q Consensus 115 ~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~~~i~----~~t~lv~i~~~~~~tG~~~pi~~I~~~ 189 (406) T Consensus 71 eVivp~~tf~at~~ai~----~~Ga~pvf~Dvd~~t~~id~~~l~~~it~~~~~ktkaIi~vh~---~G~~~d~~~i~~i 143 (380) T TIGR03588 71 EVWTTPITFVATANCAL----YCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDF---AGKSVDMQAIAAL 143 (380) T ss_pred EEEECCCCCHHHHHHHH----HCCCEEEEEECCHHHCCCCHHHHHHHHHHCCCCCCEEEEEECC---CCEECCHHHHHHH T ss_conf 99967853088679999----8799689984410001489888777776436777259999489---8543489999999 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHC----CCCCCCCCC--CCCCCCCC-CHHHCCCC-CCCCCEEECCCCEEEEEEE- Q ss_conf 344443101233200011100001100----112223432--22354443-10002566-6310012114530343320- Q gi|254781062|r 190 AHERNIPVLVDGSQGSVHNFVDVQDID----CDWYIITGH--KLYGPSGI-GGLYSKES-RLNEMDPFMGGSEMIADVT- 260 (406) Q Consensus 190 ~~~~g~~~~vD~aq~~g~~~id~~~~~----~D~~~~S~h--K~~Gp~G~-G~l~~~~~-~~~~~~p~~~g~~~~~~~~- 260 (406) T Consensus 144 a~~~~i~lIEDaA~a~Ga~-~~gk~~Gs~~~gd~~~fSF~~~K~it-tGeGG~i~tnd~~l~~~~r~lr~~G~-~~~~~~ 220 (380) T TIGR03588 144 AKKHGLKIIEDASHALGAE-YGGKPVGNCRYADATVFSFHPVKIIT-TAEGGAVTTNDEELAERMRLLRSHGI-TKDPLL 220 (380) T ss_pred HHHCCCEEEEECCCHHCCC-CCCCCCCCCCCCCEEEEECCCCCCCC-CCCCEEEEECCHHHHHHHHHHHHCCC-CCCCCH T ss_conf 9986988999880011577-57876566443524677335555577-78853999699999999999997696-777310 Q ss_pred ---CCCC----CCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC Q ss_conf ---2453----003310000012212024566421012332222222222222222222222222210132268521586 Q gi|254781062|r 261 ---QDMV----TYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSP 333 (406) Q Consensus 261 ---~~~~----~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~ 333 (406) T Consensus 221 ~~~~~~~~~~y~~~~~G~N~rm--seiqAAig----~~qL~~--ld~~~~~R~~ia~~Y~~~L~~~~~~~~~~~~~~~~~ 292 (380) T TIGR03588 221 FEKQDEGPWYYEQQELGFNYRM--TDIQAALG----LSQLKK--LDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKS 292 (380) T ss_pred HCCCCCCCCEEEEECCCCCCCC--CHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE T ss_conf 0146788740366347666543--12414876----888888--999999999999999996478998356746999831 Q ss_pred ---EEEEEECC---CCHHHHHHHHHHCCCEEEECCHH--HHHHHHH-CC---C-------CCEEEEEECCCCCHHHHHHH Q ss_conf ---79998089---99999999998789699975211--2788997-28---9-------95799993588899999999 Q gi|254781062|r 334 ---IISFRLGN---IHPYDLALFLDGEGIAIRAGTHC--ANPLLKF-LG---I-------DSLCRASLAMYNTYEEADKF 394 (406) Q Consensus 334 ---iv~~~~~~---~~~~~v~~~L~~~gI~v~~G~~c--a~~~~~~-~g---~-------~~~iRiS~~~~nt~edid~~ 394 (406) T Consensus 293 ~~~~y~i~~~~~~~~~r~~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~p~ae~~~~~~l~LP~~~~Lt~~di~~I 372 (380) T TIGR03588 293 AWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRV 372 (380) T ss_pred EEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHH T ss_conf 56899999826673149999999997799856723044229988827887998799999849798979999899999999 Q ss_pred HHHHHHHH Q ss_conf 99999999 Q gi|254781062|r 395 IETLKKSI 402 (406) Q Consensus 395 i~~l~~~i 402 (406) T Consensus 373 ~~~Ik~vL 380 (380) T TIGR03588 373 VETLRKVL 380 (380) T ss_pred HHHHHHHC T ss_conf 99999869

HHsearch alignment for GI: 254781062 and conserved domain: TIGR03588