HHsearch alignment for GI: 254781062 and conserved domain: cd00616
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=2.2e-25 Score=179.66 Aligned_cols=321 Identities=22% Similarity=0.278 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999861498660267999999999999999999982879765433468768987654322344432013443454
Q gi|254781062|r 40 IDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLS 119 (406)
Q Consensus 40 ~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s 119 (406)
T Consensus 2 ~~~v~~~l~s~~~~--~G---------~~v~~fE~~~~~~~g~k~---~v~~~sgt~Al~lal~~l---~~~~gdeVi~p 64 (352)
T cd00616 2 LEAVEEVLDSGWLT--LG---------PKVREFEKAFAEYLGVKY---AVAVSSGTAALHLALRAL---GIGPGDEVIVP 64 (352)
T ss_pred HHHHHHHHHCCCCC--CC---------HHHHHHHHHHHHHHCCCE---EEEECCHHHHHHHHHHHC---CCCCCCEEEEC
T ss_conf 78999998369977--98---------769999999999978593---999768899999999986---97883999989
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 011000010000122223222222222222-2102578875102334433222222223333333210002344443101
Q gi|254781062|r 120 VMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL 198 (406)
Q Consensus 120 ~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~ 198 (406)
T Consensus 65 ~~t~~at~~ai~----~~G~~pv~~Di~~~t~~id~~~l~~~i~~~tkaIi~vh~---~G~~~d~~~i~~~~~~~~i~lI 137 (352)
T cd00616 65 SFTFVATANAIL----LLGATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPVHL---YGNPADMDAIMAIAKRHGLPVI 137 (352)
T ss_pred CCCCHHHHHHHH----HCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECC---CCCCCCHHHHHHHHHHCCCEEE
T ss_conf 976398999999----859989984077785775889999762868709999689---8986688999999997798998
Q ss_pred CCCCCCCCCCCCCHHHHC--CCCCCCCCC--C-CCCCCCCCHHHCCCCC-CCCCEEECCCCEEEEEEECCCCCCCCCHHC
Q ss_conf 233200011100001100--112223432--2-2354443100025666-310012114530343320245300331000
Q gi|254781062|r 199 VDGSQGSVHNFVDVQDID--CDWYIITGH--K-LYGPSGIGGLYSKESR-LNEMDPFMGGSEMIADVTQDMVTYADLPYR 272 (406)
Q Consensus 199 vD~aq~~g~~~id~~~~~--~D~~~~S~h--K-~~Gp~G~G~l~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r 272 (406)
T Consensus 138 eDaA~a~Gs~~-~~~~~G~~gd~~~fSF~~~K~it~geG-G~i~tn~~~~~~~~~~lr~~G~~-~~~--~~~~~~~~G~N 212 (352)
T cd00616 138 EDAAQALGATY-KGRKVGTFGDAGAFSFHPTKNLTTGEG-GAVVTNDEELAERARLLRNHGRD-RDR--FKYEHEILGYN 212 (352)
T ss_pred EHHHHHCCCCC-CCEECCCCCCCCCCCCCCCCCCCCCCC-EEEEECCHHHHHHHHHHHHCCCC-CCC--CCCEEEECCCC
T ss_conf 02200216834-671256643425344787756767773-49996999999999999965966-998--85246736834
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC---CEEEEEECC---CCHHH
Q ss_conf 001221202456642101233222222222222222222222222221013226852158---679998089---99999
Q gi|254781062|r 273 FEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDS---PIISFRLGN---IHPYD 346 (406)
Q Consensus 273 ~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~---~iv~~~~~~---~~~~~ 346 (406)
T Consensus 213 ~r--msel~Aaig----l~qLk~--ld~~~~~R~~i~~~Y~~~L~~~~~i~~~~~~~~~~~~~~~~~i~l~~~~~~~R~~ 284 (352)
T cd00616 213 YR--LSEIQAAIG----LAQLEK--LDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDE 284 (352)
T ss_pred CC--HHHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHH
T ss_conf 22--588899999----999998--8999999999999999983789981616669998335579999986502105999
Q ss_pred HHHHHHHCCCEEEECCHHHHH-----HHHHCCC------------CCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 999998789699975211278-----8997289------------9579999358889999999999999
Q gi|254781062|r 347 LALFLDGEGIAIRAGTHCANP-----LLKFLGI------------DSLCRASLAMYNTYEEADKFIETLK 399 (406)
Q Consensus 347 v~~~L~~~gI~v~~G~~ca~~-----~~~~~g~------------~~~iRiS~~~~nt~edid~~i~~l~ 399 (406)
T Consensus 285 l~~~L~~~gI~~~~--~y~p~~~~~~~~~~~~~~~~~~pna~~i~~~~l~LP~~~~Lt~~di~~I~~~IK 352 (352)
T cd00616 285 LIEALKEAGIETRV--HYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHHHCCCCEEE--ECCCHHHCHHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 99999987998580--283333384989725998899989999984979898999879999999999749