HHsearch alignment for GI: 254781062 and conserved domain: pfam01212
>pfam01212 Beta_elim_lyase Beta-eliminating lyase.
Probab=99.77 E-value=4.3e-20 Score=146.28 Aligned_cols=249 Identities=20% Similarity=0.236 Sum_probs=159.0
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88989899999999998614986602679999999999999999999828797654334687689876543223444320
Q gi|254781062|r 32 SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHIS 111 (406)
Q Consensus 32 ~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~ 111 (406)
T Consensus 7 ~t~~t~~m~~a~~~a~~Gdd--~-----Yg~D---~t~~~le~~~a~l~G~e---aalfv~sGT~AN~ial~~~----~~ 69 (288)
T pfam01212 7 VTGPTPAMREAMAAAMVGDE--V-----YGGD---PTVNRLEDRVAELFGKE---AALFVPSGTMANQLALMAH----CR 69 (288)
T ss_pred CCCCCHHHHHHHHHCCCCCC--C-----CCCC---HHHHHHHHHHHHHHCCC---EEEECCCCHHHHHHHHHHH----CC
T ss_conf 88899999999982335773--2-----2679---89999999999986998---2998688679999999983----88
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC-------CCCCCCCCCCCCCCC-CCCCC-
Q ss_conf 134434540110000100001222232222222222222102578875102-------334433222222223-33333-
Q gi|254781062|r 112 TGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT-------ERTKLIAITHMSNVL-GTVIP- 182 (406)
Q Consensus 112 ~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~-------~~t~lv~i~~~~~~t-G~~~p- 182 (406)
T Consensus 70 ~g~~vi~~~~sHi~~-~E~ga~~~~~G~~~~~l~~~~~G~~~~~~l~~~i~~~~~~h~~~~~~v~le~t~n~~gG~~~~~ 148 (288)
T pfam01212 70 RGDEVICGEPAHIYF-DETGGHAELGGAQPVPLPGAEAGKLDLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGGQVVSL 148 (288)
T ss_pred CCCEEEEECCCCCEE-ECCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEECCH
T ss_conf 998899835767654-5677799982982584478778982999999987644985467654799995544889665578
Q ss_pred --CCCEECCCCCCCCCCCCCCCC---CCCCCCCCHHHH--CCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEE--CCC
Q ss_conf --321000234444310123320---001110000110--01122234322-23544431000256663100121--145
Q gi|254781062|r 183 --IKEICRIAHERNIPVLVDGSQ---GSVHNFVDVQDI--DCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPF--MGG 252 (406)
Q Consensus 183 --i~~I~~~~~~~g~~~~vD~aq---~~g~~~id~~~~--~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~--~~g 252 (406)
T Consensus 149 ~el~~i~~~a~~~gl~lHmDGARl~nA~~a~~~~~~e~~~~~D~v~~~~sK~lga~~G-avl~g~~~~i~~a~~~rk~lG 227 (288)
T pfam01212 149 EELREIRAIAREHGIPLHLDGARLANAAVALGVIVKEITSYADSVSMSLSKGLGAPVG-SVLAGSDDFIAYAIRQRKYLG 227 (288)
T ss_pred HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCEE-EEEEECHHHHHHHHHHHHHHH
T ss_conf 9999999999980993763087898888760999889854688899984357886100-389828999999999999972
Q ss_pred CEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf 3034332024530033100000122120245664210123322222222222222222222222222101322
Q gi|254781062|r 253 SEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLV 325 (406)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~ 325 (406)
T Consensus 228 g~mr-----------------q~g~~aaa~~~----aL~----~~~~~-l~~dh~~A~~La~~l~~~~~~~~~ 274 (288)
T pfam01212 228 GGMR-----------------QAGVLAAAGLR----ALE----EGVAR-LGRDHATARRLAEGLELLRGVIPR 274 (288)
T ss_pred CCHH-----------------HHHHHHHHHHH----HHH----HCHHH-HHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 6425-----------------66799999999----998----08988-888899999999999768993226