HHsearch alignment for GI: 254781062 and conserved domain: pfam01276
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=99.83 E-value=6e-21 Score=151.65 Aligned_cols=263 Identities=19% Similarity=0.209 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999982879765433468768987654322344432013443454011000010000122223222222222
Q gi|254781062|r 67 DKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI 146 (406)
Q Consensus 67 ~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~ 146 (406)
T Consensus 66 g~I~eAq~~aA~~fga~~--t~flvnGsT~g~~a~i~a~----~~~Gd~Vlv~RN~HkSv~~al~----l~g~~Pvyl~p 135 (417)
T pfam01276 66 GPIKEAQKYAARVFGADK--SYFVVNGTSGANKTVGMAV----CTPGDTVLIDRNCHKSIHHALM----MSGATPVYLEP 135 (417)
T ss_pred HHHHHHHHHHHHHHCCCC--EEEEECCCCHHHHHHHHHH----CCCCCEEEEECCCHHHHHHHHH----HCCCEEEEECC
T ss_conf 399999999999839993--6998468309999999974----3899989971641899999999----86985899536
Q ss_pred CCC--CC--------CHHHHHHHHCCCCC-----CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC--CCCC
Q ss_conf 222--21--------02578875102334-----4332222222233333332100023444431012332000--1110
Q gi|254781062|r 147 DNQ--GF--------FHIDEFKNRLTERT-----KLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGS--VHNF 209 (406)
Q Consensus 147 ~~~--g~--------id~~~l~~~i~~~t-----~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~--g~~~ 209 (406)
T Consensus 136 ~~~~~gi~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~Pt-Y~G~~~di~~i~~~~h~~~~~llvDEAhGah~~F~p 214 (417)
T pfam01276 136 TRNAYGIIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGT-YDGTIYNAKEIVDTLGHLSDYILFDSAWVGYEQFIP 214 (417)
T ss_pred CCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCC-CCEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCC
T ss_conf 4243466158882545999999999858765685089998999-870652899999998633987999788752024687
Q ss_pred C--CHHHHCCC-------CCCCCCCCC-CCCCCCCHHHCCCCC-CCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCC
Q ss_conf 0--00110011-------222343222-354443100025666-310012114530343320245300331000001221
Q gi|254781062|r 210 V--DVQDIDCD-------WYIITGHKL-YGPSGIGGLYSKESR-LNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTP 278 (406)
Q Consensus 210 i--d~~~~~~D-------~~~~S~hK~-~Gp~G~G~l~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~ 278 (406)
T Consensus 215 lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQ~s~Lh~~~~~~~~~~------------------~~~~~l~~~qTTSP 276 (417)
T pfam01276 215 IYADASPMGGDNVNDPGIIVTQSVHKLLAAFSQASQIHKKDSHIVNHK------------------RFNEAFMMHTSTSP 276 (417)
T ss_pred CCHHHHHCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCCCCHH------------------HHHHHHHHHCCCCH
T ss_conf 833466567886667722798611113543043432121678778999------------------99999997738874
Q ss_pred CCHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCE---EEECCCCCC------------------------
Q ss_conf 2024566421012332-222222222222222222222222210---132268521------------------------
Q gi|254781062|r 279 PISQAIALGVALDYVE-KIDRKSIFSYERELARYVRSRLKEVRG---MQLVNESLE------------------------ 330 (406)
Q Consensus 279 ~~~~~~al~~al~~~~-~~g~~~i~~~~~~l~~~l~~~L~~~~g---~~i~~~~~~------------------------ 330 (406)
T Consensus 277 sY~lmASLD~ar~~m~~~~G~-~l~~~~i~~a~~~R~~i~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~hg~~~~~~~~ 355 (417)
T pfam01276 277 FYPIVASLDVAAAMMEGNSGR-RLWQESLERAIEFRKEIKTLNDGEFFRPWNPEIVDGKECWPFHPGEKWHGFEGYDDNQ 355 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
T ss_conf 899999999999997535549-9999999999999999986457852203671004771010247653213555555554
Q ss_pred ---CCCEEEEEEC-----------CCCHHHHHHHHHHCCCEEE
Q ss_conf ---5867999808-----------9999999999987896999
Q gi|254781062|r 331 ---DSPIISFRLG-----------NIHPYDLALFLDGEGIAIR 359 (406)
Q Consensus 331 ---~~~iv~~~~~-----------~~~~~~v~~~L~~~gI~v~ 359 (406)
T Consensus 356 ~~lDptKltI~t~g~~~~g~~~~~GisG~~v~~~Lre~gI~~E 398 (417)
T pfam01276 356 YFLDPIKLTILTPGIDETGEYEEFGVPATIVAKYLREHGIVPE 398 (417)
T ss_pred CCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHCCCEEE
T ss_conf 2577856999807868776333239779999999998698898