HHsearch alignment for GI: 254781062 and conserved domain: pfam04864
>pfam04864 Alliinase_C Allinase. Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesized from sulfoxide cysteine derivatives by alliinase (EC:4.4.1.4), whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system.
Probab=98.04 E-value=3.4e-05 Score=52.34 Aligned_cols=287 Identities=19% Similarity=0.202 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHCC-CC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCC---CCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 9999999999828-79-765433468768987654322344432013---443454011000010000122223222222
Q gi|254781062|r 69 YEKARDKVRRFIN-AS-SVKEIIFTRSATESINLVSYGWGARHISTG---DEIVLSVMEHHSNIIPWYFLRQRRGASLVW 143 (406)
Q Consensus 69 ~~~aR~~ia~~lg-a~-~~~~v~ft~~~Te~~n~~~~~~~~~~~~~g---d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~ 143 (406)
T Consensus 48 Le~~Ir~LH~~VGNAvtdgr~iv~GtGsTQL~~Aav~ALs~~~-~~~~~p~~VV-a~aPyYs~y~~qT~~~~s~--~y~w 123 (363)
T pfam04864 48 LEREIRRLHRAVGNAVTDDRYIVFGTGSTQLLQAAVYALSPNV-TPTSPPVKVV-AAVPYYSVYKEQTSYFDSK--GYEW 123 (363)
T ss_pred HHHHHHHHHHHHCCCEECCEEEEEECCHHHHHHHHHHHCCCCC-CCCCCCCCEE-ECCCCCCCCHHHHHHHCCC--CCEE
T ss_conf 9999999998633421066169991788999999998638899-9878873235-5687664428788884567--8446
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC-CCCHHHHCCCCCCC
Q ss_conf 22222221025788751023344332222222233333332100023444431012332000111-00001100112223
Q gi|254781062|r 144 VPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHN-FVDVQDIDCDWYII 222 (406)
Q Consensus 144 i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~-~id~~~~~~D~~~~ 222 (406)
T Consensus 124 -----~G--da~~~~~~~~~~~~IElVtSPNNPdG~lr~--aV---~~g~~~k~i~D~aYYWPhyTpIt-~~aD~DIMLF 190 (363)
T pfam04864 124 -----KG--NASAYVNTDNPGPFIELVTSPNNPDGTLRE--AV---IDGSEAKVIHDLAYYWPHYTPIT-YPADEDIMLF 190 (363)
T ss_pred -----CC--CHHHHCCCCCCCCEEEEEECCCCCCCHHHH--HH---CCCCCCEEEEEEEEECCCCCCCC-CCCCCCEEEE
T ss_conf -----34--689836799988728998389998401336--65---06998418875200066666767-7776767989
Q ss_pred CCCCCCCCCC--CCHHHCCCCC-CCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHH---HHHCCC----
Q ss_conf 4322235444--3100025666-31001211453034332024530033100000122120245664---210123----
Q gi|254781062|r 223 TGHKLYGPSG--IGGLYSKESR-LNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIAL---GVALDY---- 292 (406)
Q Consensus 223 S~hK~~Gp~G--~G~l~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al---~~al~~---- 292 (406)
T Consensus 191 TlSK~TGHAGsRiGWALVKD~~VakkM~~y~~l---------N-----------t~GvS~dSQlRa~kiLkvv~~~~~~~ 250 (363)
T pfam04864 191 TMSKYTGHAGSRFGWALVKDEEVAKKMVEYIEL---------N-----------TIGVSKESQLRTLKILKVVLATCKTE 250 (363)
T ss_pred EECCCCCCCCCCEEEEEECCHHHHHHHHHHHHH---------C-----------CCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 861223676252347886379999999999765---------0-----------53068899999999999999763267
Q ss_pred -----CCCCCCCCCCCCCCCCCCCCCC----CCCCCCE--EEECCCCCCCCCEEE-EEECCCCHHHHHHHHHHCCCEEEE
Q ss_conf -----3222222222222222222222----2222210--132268521586799-980899999999999878969997
Q gi|254781062|r 293 -----VEKIDRKSIFSYERELARYVRS----RLKEVRG--MQLVNESLEDSPIIS-FRLGNIHPYDLALFLDGEGIAIRA 360 (406)
Q Consensus 293 -----~~~~g~~~i~~~~~~l~~~l~~----~L~~~~g--~~i~~~~~~~~~iv~-~~~~~~~~~~v~~~L~~~gI~v~~ 360 (406)
T Consensus 251 ~~~~~iF~fg~~~m~~RW~~L~~~v~~S~~FsL~~~~p~yC~ff~~~~~~sPafaWlkCe~eed~DC~~~L~~~~I~~r~ 330 (363)
T pfam04864 251 SGTMGFFDFGYQTMRERWERLRELVSSSTRFSLQKLPPEYCNYFKKIREPSPAYAWLKCEWEEDTDCYEVLREGKILTRS 330 (363)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEECCC
T ss_conf 66235789999999999999999971158077267787766542321689986379972663201799999878864568
Q ss_pred CCHHHHHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 52112788997289-9579999358889999999999999999
Q gi|254781062|r 361 GTHCANPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 361 G~~ca~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
T Consensus 331 G~~--------Fga~~~YVRlSll--~~~d~Fd~lleRL~~lV 363 (363)
T pfam04864 331 GER--------FGADSRYVRLSLI--KTQDDFDQLLQRLKSLV 363 (363)
T ss_pred CCC--------CCCCCCEEEEEEE--CCHHHHHHHHHHHHHHC
T ss_conf 764--------5889876999840--68878999999998549