HHsearch alignment for GI: 254781062 and conserved domain: pfam05889

>pfam05889 SLA_LP_auto_ag Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). This family consists of several eukaryotic and archaeal proteins which are related to the human soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway. Some archaeal members are annotated as being pyridoxal phosphate-dependent enzymes.
Probab=99.13  E-value=5.3e-11  Score=88.99  Aligned_cols=288  Identities=19%  Similarity=0.220  Sum_probs=158.6

Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf             99999828797654334687689876543223444320134-434540110000100001222232222222222222--
Q gi|254781062|r   74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGD-EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQG--  150 (406)
Q Consensus        74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd-~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g--  150 (406)
T Consensus        63 ~d~lr~~G~~s~~~~~vvP~aT-GMsl-~~~L~~~~~rp~a~yViw~RiDqKSc~Kai----~~AGl~p~vVe~~~~~d~  136 (389)
T pfam05889        63 KDFLKLLGLREVKNCFVVPLAT-GMSL-LCMLSWRRKRPKAKYVIWPRIDQKSSIKAA----ERAGFEPRLVETVLDGDY  136 (389)
T ss_pred             HHHHHHCCCCCCCCEEEECCCC-CHHH-HHHHHHHHHCCCCCEEEEECCCCCCHHHHH----HHCCCEEEEEEEEECCCE
T ss_conf             9999982974316578950410-4799-999999855889978998635552268999----976971488752522882


Q ss_pred             -CCHHHHHHHHCCC---CCCCCCCCCCCCCCCCC-CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHH-------HCCC
Q ss_conf             -1025788751023---34433222222223333-3332100023444431012332000111000011-------0011
Q gi|254781062|r  151 -FFHIDEFKNRLTE---RTKLIAITHMSNVLGTV-IPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQD-------IDCD  218 (406)
Q Consensus       151 -~id~~~l~~~i~~---~t~lv~i~~~~~~tG~~-~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~-------~~~D  218 (406)
T Consensus       137 l~Td~~~ie~~i~~~g~~~ilcVlsTTScFaPR~pD~v~~IAklC~~~~IpHvVNnAYGlQ~~~~-~~~i~~a~r~GRVD  215 (389)
T pfam05889       137 LITDVNDVETIIEEKGEEVILAVLSTTSCFAPRSPDNVKEIAKICAEYDVPHLVNGAYGIQSEET-IRLIAAAHECGRVD  215 (389)
T ss_pred             EECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHH-HHHHHHHHHCCCCE
T ss_conf             43589999999998387766899844665699996679999999997499747843036617999-99999998638821


Q ss_pred             CCCCCCCC-CCCCCCCCHHHCCC-CCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf             22234322-23544431000256-66310012114530343320245300331000001221202456642101233222
Q gi|254781062|r  219 WYIITGHK-LYGPSGIGGLYSKE-SRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI  296 (406)
Q Consensus       219 ~~~~S~hK-~~Gp~G~G~l~~~~-~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~  296 (406)
T Consensus       216 a~VQStDKNflVPVGGaIIas~d~~~i~~is~~YPGRAS--------------------~sp~lDlfI----TLLslG~~  271 (389)
T pfam05889       216 AVVQSLDKNFIVPVGGAIIAAFDESFIQEISEEYPGRAS--------------------ARPSKDKLI----TLLSLGCK  271 (389)
T ss_pred             EEEEECCCCEEEECCCEEEEECCHHHHHHHHHCCCCCCC--------------------CCHHHHHHH----HHHHHHHH
T ss_conf             899706866255348748970888999999841899777--------------------740799999----99997488


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCC---CEEEECCCCCCCCCE-EEEEECC------CCHHHHHHHHHHCCCE----EEEC-
Q ss_conf             22222222222222222222222---101322685215867-9998089------9999999999878969----9975-
Q gi|254781062|r  297 DRKSIFSYERELARYVRSRLKEV---RGMQLVNESLEDSPI-ISFRLGN------IHPYDLALFLDGEGIA----IRAG-  361 (406)
Q Consensus       297 g~~~i~~~~~~l~~~l~~~L~~~---~g~~i~~~~~~~~~i-v~~~~~~------~~~~~v~~~L~~~gI~----v~~G-  361 (406)
T Consensus       272 gy~~Ll~eRke~~~~l~e~L~~~a~~~ge~lL~t~~--N~IS~aitl~~l~~~~~~~~t~lgs~Lf~r~VsG~RvV~~~~  349 (389)
T pfam05889       272 AYLALMKEQKEMFPLLRELLKDLAEEVGEQLLDVPH--NPISSAMTLETLDEISKKGRTDLGSELFSRRVTGARVVRSSD  349 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC--CCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCC
T ss_conf             899999999999999999999999982987513899--951688873455666755499999999756787651665688


Q ss_pred             -------CHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf             -------211278899728995799993588899999999999999999
Q gi|254781062|r  362 -------THCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ  403 (406)
Q Consensus       362 -------~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~  403 (406)
T Consensus       350 ~~~~~~~~~y~~~Ylt---------~aaaiG~~~~dVd~f~~rL~k~l~  389 (389)
T pfam05889       350 PFGTIEGCEYHGRYLN---------IASAIGMKDEDVDYVIERLDEILE  389 (389)
T ss_pred             CCCEEECCCCCCHHHH---------HHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf             8534616768836789---------998708868999999999998529