RPSBLAST alignment for GI: 254781062 and conserved domain: TIGR03403

>gnl|CDD|132444 TIGR03403, nifS_epsilon, cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation. Length = 382
 Score =  138 bits (348), Expect = 3e-33
 Identities = 114/401 (28%), Positives = 179/401 (44%), Gaps = 49/401 (12%)

Query: 25  IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASS 84
           +Y DN A+      V + +   +   Y N +  LH    A      +A DK+ + INA  
Sbjct: 1   VYLDNNATTMLDPKVKELMDPFFCDIYGNPN-SLHQFGTATHPAIAEALDKLYKGINARD 59

Query: 85  VKEIIFTRSATESINLVSYGWGARHISTGD--EIVLSVMEHHSNIIPWYFLRQRRGASLV 142
           + +II T  ATES N V  G     I  G    I+ + +EH +      FL +  G  + 
Sbjct: 60  LDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFL-ESLGVEVT 118

Query: 143 WVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGS 202
           ++PI+ QG    ++ +  +TE+T L+++   +N  G + PIKEI  I  ER +    D  
Sbjct: 119 YLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAV 178

Query: 203 QGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDP-FMGGSEMIADVTQ 261
           Q      VDVQ    D+   + HK +GP G+GGLY ++    E+ P F GG  M      
Sbjct: 179 QAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGV--ELTPLFHGGEHMGGR--- 233

Query: 262 DMVTYADLPYRFEPGTPPISQAIALGVALDY-VEKIDRKSIFSYERELARYVRSRLK--- 317
                         GT  +   +A+G A+    E +D      +E+   R +R RL+   
Sbjct: 234 ------------RSGTLNVPYIVAMGEAMRLANEYLD------FEKSHVRRLRDRLEDAL 275

Query: 318 -EVRGMQLVNESLEDSP---IISFRLGNIHPYDLALFLDGEGIAIRAGTHCA------NP 367
            E+  + +V +     P   +IS +   +    +   L+  GIA   G+ CA      NP
Sbjct: 276 LELPDVFVVGDREHRVPNTILISIK--GVEGEAMLWDLNKAGIAASTGSACASEDLEANP 333

Query: 368 LLKFLGID-----SLCRASLAMYNTYEEADKFIETLKKSIQ 403
           ++  +G D     +  R SL+ + T EE D  IE  KK++Q
Sbjct: 334 VMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQ 374