RPSBLAST alignment for GI: 254781062 and conserved domain: TIGR03403
>gnl|CDD|132444 TIGR03403, nifS_epsilon, cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation. Length = 382
Score = 138 bits (348), Expect = 3e-33
Identities = 114/401 (28%), Positives = 179/401 (44%), Gaps = 49/401 (12%)
Query: 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASS 84
+Y DN A+ V + + + Y N + LH A +A DK+ + INA
Sbjct: 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPN-SLHQFGTATHPAIAEALDKLYKGINARD 59
Query: 85 VKEIIFTRSATESINLVSYGWGARHISTGD--EIVLSVMEHHSNIIPWYFLRQRRGASLV 142
+ +II T ATES N V G I G I+ + +EH + FL + G +
Sbjct: 60 LDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFL-ESLGVEVT 118
Query: 143 WVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGS 202
++PI+ QG ++ + +TE+T L+++ +N G + PIKEI I ER + D
Sbjct: 119 YLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAV 178
Query: 203 QGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDP-FMGGSEMIADVTQ 261
Q VDVQ D+ + HK +GP G+GGLY ++ E+ P F GG M
Sbjct: 179 QAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGV--ELTPLFHGGEHMGGR--- 233
Query: 262 DMVTYADLPYRFEPGTPPISQAIALGVALDY-VEKIDRKSIFSYERELARYVRSRLK--- 317
GT + +A+G A+ E +D +E+ R +R RL+
Sbjct: 234 ------------RSGTLNVPYIVAMGEAMRLANEYLD------FEKSHVRRLRDRLEDAL 275
Query: 318 -EVRGMQLVNESLEDSP---IISFRLGNIHPYDLALFLDGEGIAIRAGTHCA------NP 367
E+ + +V + P +IS + + + L+ GIA G+ CA NP
Sbjct: 276 LELPDVFVVGDREHRVPNTILISIK--GVEGEAMLWDLNKAGIAASTGSACASEDLEANP 333
Query: 368 LLKFLGID-----SLCRASLAMYNTYEEADKFIETLKKSIQ 403
++ +G D + R SL+ + T EE D IE KK++Q
Sbjct: 334 VMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQ 374