HHsearch alignment for GI: 254781063 and conserved domain: TIGR03406
>TIGR03406 FeS_long_SufT probable FeS assembly SUF system protein SufT. The function is unknown for this protein family, but members are found almost always in operons for the the SUF system of iron-sulfur cluster biosynthesis. The SUF system is present elsewhere on the chromosome for those few species where SUF genes are not adjacent. This family shares this property of association with the SUF system with a related family, TIGR02945. TIGR02945 consists largely of a DUF59 domain (see pfam01883), while this protein is about double the length, with a unique N-terminal domain and DUF59 C-terminal domain. A location immediately downstream of the cysteine desulfurase gene sufS in many contexts suggests the gene symbol sufT. Note that some other homologs of this family and of TIGR02945, but no actual members of this family, are found in operons associated with phenylacetic acid (or other ring-hydroxylating) degradation pathways.
Probab=100.00 E-value=4.8e-37 Score=243.51 Aligned_cols=120 Identities=40% Similarity=0.700 Sum_probs=107.0
Q ss_pred CCCCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEE----CCCEEEEEEEECCCCCC
Q ss_conf 3210000268988778---8565358999999997208888899843320401321560----39969999996589885
Q gi|254781063|r 9 ENNIADKIALSPESTI---PPEDLERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVE----NDYMVKILMTLTAPGCP 81 (129)
Q Consensus 9 ~~~~~d~~~~~~~~~~---~~~~~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~----~~g~V~V~l~lT~~~CP 81 (129)
T Consensus 48 ~g~DaDAlG~~~~~~~~~~~~~~~~~~E~~vweaLk~V~DPEIpVnIVdLGLIY~v~i~~~~~~~~~V~I~MTLTapgCp 127 (174)
T TIGR03406 48 DGKDADALGKEPPPPLDLPENADGEDNEDQVWEQLRTVYDPEIPVNIVDLGLVYGCRVEKLGEGQFRVDIEMTLTAPGCG 127 (174)
T ss_pred CCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCCC
T ss_conf 57486661899776556788888742099999998415598887544863025799987647889779999960479998
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHCCC
Q ss_conf 17899999999997099866169999977889833069899996079
Q gi|254781063|r 82 VAGDMPKWIENAVGAVEGISGVEVSITFDPPWTPDLMSEEAQIATGY 128 (129)
Q Consensus 82 ~~~~i~~~i~~al~~~~gv~~V~V~~~~~p~W~~~~is~~~r~~lG~ 128 (129)
T Consensus 128 mg~~i~~dv~~~v~~v~~v~~v~VelV~dPpW~~dmmSeeakl~LGm 174 (174)
T TIGR03406 128 MGPVLVEDVEDKVLAVPNVDEVEVELVFDPPWSREMMSEAAKLELGM 174 (174)
T ss_pred CCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHCCHHHHHHCCC
T ss_conf 31799999999997799966499999988998933477999987389