HHsearch alignment of GI: 254781063 and MMDB domain: 1uwd_A_1-88
>1uwd_A (A:1-88) Hypothetical protein TM0487; structural genomics, unknown function, contains PAAD domain, similar to PAAD protein, unknown activity; NMR {Thermotoga maritima}
Probab=99.86 E-value=6.7e-22 Score=152.15 Aligned_cols=85 Identities=44% Similarity=0.800 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf 35899999999720888889984332040132156039969999996589885178999999999970998661699999
Q gi|254781063|r 29 LERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSIT 108 (129)
Q Consensus 29 ~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~ 108 (129)
....+++|+++|++|+|||+|+||++||+||++.++++|.|.|.|+||+++||+.+.|.++|+++|++++|+.+|+|+++
T Consensus 4 ~~~t~~~V~~aL~~v~DP~~~~div~lg~V~~i~v~~dg~V~v~i~l~~~~~~~~~~l~~~i~~~l~~l~gv~~v~V~~~ 83 (88)
T 1uwd_A 4 KKVTKEDVLNALKNVIDFELGLDVVSLGLVYDIQIDDQNNVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (88)
T ss_dssp SCCCHHHHHHHHTTCBCTTTSSBTTTTTCCCCEEECTTCEEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred CCCCHHHHHHHHHCCCCCCCCCCEEECCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 52789999999856889999937144360445665145653688863789996289999999999973899750899999
Q ss_pred ECCCC
Q ss_conf 77889
Q gi|254781063|r 109 FDPPW 113 (129)
Q Consensus 109 ~~p~W 113 (129)
|+|||
T Consensus 84 ~~~pw 88 (88)
T 1uwd_A 84 FDPPW 88 (88)
T ss_dssp CSSCC
T ss_pred ECCCC
T ss_conf 63999