HHsearch results for GI: 254781063 and protein with PDBid: 1veh_A
>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.52.8.1
Probab=91.27 E-value=0.17 Score=28.69 Aligned_cols=76 Identities=21% Similarity=0.282 Sum_probs=53.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHH-HHHHHHHHHH-CCCCCCE
Q ss_conf 8565358999999997208888899843320401321560399699999965898851789-9999999997-0998661
Q gi|254781063|r 25 PPEDLERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGD-MPKWIENAVG-AVEGISG 102 (129)
Q Consensus 25 ~~~~~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~-i~~~i~~al~-~~~gv~~ 102 (129)
+..+.+.+.++|.+.|..-+-|-+.. +=|-|.-+.++ +|.|.|.|.=.+.+||+... +...|++.|+ .+|.+..
T Consensus 7 ~~~~d~e~~~~I~~~L~~~IrP~l~~---dGGdv~~v~~~-~g~V~v~l~GaC~gC~~s~~Tl~~~Ie~~L~~~vpev~~ 82 (92)
T 1veh_A 7 GSEEDDEVVAMIKELLDTRIRPTVQE---DGGDVIYRGFE-DGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEG 82 (92)
T ss_dssp SCSSCCHHHHHHHHHHHHTTHHHHHH---HSCCCCEEEEE-TTEEEECCCCCCCCCHHHHHHTHHHHHHHHHHHCSSCCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCHHHHH---CCCCEEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 89763899999999999751678996---59936999951-887999965357887618999999999999997899556
Q ss_pred EE
Q ss_conf 69
Q gi|254781063|r 103 VE 104 (129)
Q Consensus 103 V~ 104 (129)
|.
T Consensus 83 V~ 84 (92)
T 1veh_A 83 VE 84 (92)
T ss_dssp EE
T ss_pred EE
T ss_conf 99