HHSEARCH alignment of GI: 254781063 and SCOP domain: d1uwda_

Alignment

Probab=99.97  E-value=1e-31  Score=208.79  Aligned_cols=98  Identities=44%  Similarity=0.767  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf             89999999972088888998433204013215603996999999658988517899999999997099866169999977
Q gi|254781063|r   31 RISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSITFD  110 (129)
Q Consensus        31 ~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~~~  110 (129)
                      ..+++|+++|++|+|||+|+|||+|||||+|.|+++|.|.|.|+||+++||+.+.|.+++++++++++||.+|+|+++|+
T Consensus         5 vt~~~V~~aL~~V~DPe~~~dIV~LGlV~~i~I~~~g~V~v~~~lt~~~Cp~~~~i~~~i~~al~~~~gV~~v~V~i~~~   84 (102)
T d1uwda_           5 VTKEDVLNALKNVIDFELGLDVVSLGLVYDIQIDDQNNVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTFD   84 (102)
T ss_dssp             CCHHHHHHHHTTCBCTTTSSBTTTTTCCCCEEECTTCEEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECCS
T ss_pred             CCHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
T ss_conf             59999999981788999992614436235677514664278886488999627999999999998289976089999962


Q ss_pred             CCCCCCCCCHHHHHHCCC
Q ss_conf             889833069899996079
Q gi|254781063|r  111 PPWTPDLMSEEAQIATGY  128 (129)
Q Consensus       111 p~W~~~~is~~~r~~lG~  128 (129)
                      |||+|+|||++||.+||+
T Consensus        85 p~W~~~~~s~~~r~~lG~  102 (102)
T d1uwda_          85 PPWTPERMSPELREKFGV  102 (102)
T ss_dssp             SCCCGGGSCHHHHHHHTC
T ss_pred             CCCCHHHCCHHHHHHCCC
T ss_conf             999937778999998579

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: PaaD-like
domain: Hypothetical protein TM0487
species: Thermotoga maritima [TaxId: 2336]