HHsearch alignment for GI: 254781064 and conserved domain: TIGR01911
>TIGR01911 HesB_rel_seleno HesB-related (seleno)protein; InterPro: IPR010965 This entry represents a family of small proteins related to HesB and its close homologs, which are likely to be involved in iron-sulphur cluster assembly. Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain..
Probab=98.89 E-value=1e-08 Score=69.91 Aligned_cols=89 Identities=15% Similarity=0.254 Sum_probs=78.8
Q ss_pred CEEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEHHHHCCCCCCCCEECCCCEEEEECHHHHH-HHCCCEEE
Q ss_conf 16526899999999997179986189999847987871132001100210122201246839999787732-00698997
Q gi|254781064|r 4 IVTMTEAAVYRIKEIVFNSQGKAQGIRISLKKGGCAGLEYMVDLVTDNPVDGDDLIEKDGVKVWIDSASLL-YMLGTEID 82 (116)
Q Consensus 4 mi~IT~~A~~~i~~l~~~~~~~~~~lRi~v~~gGC~G~~Y~l~~~~~~~~~~D~~~~~~g~~i~id~~s~~-~L~g~~ID 82 (116)
T Consensus 3 kV~~SD~Ay~efldfLK~n~~d~~V~rI~f~G~g~~GP~F~~~i--~e~nenD~~~~i~d~~f~ID~~lid~flgef~I~ 80 (93)
T TIGR01911 3 KVVMSDEAYKEFLDFLKKNDVDKDVVRIYFEGFGPSGPVFGIAI--AEKNENDEVVVIKDLTFLIDKSLIDQFLGEFSIS 80 (93)
T ss_pred EEEECHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEE--CCCCCCCEEEEECCEEEEECCHHHHHCCCEEEEE
T ss_conf 78851778888987620068987569995146258997557885--5879997478854427986502453308806998
Q ss_pred EECCCCCCEEEE
Q ss_conf 631774451289
Q gi|254781064|r 83 FKTEKLYSGFVF 94 (116)
Q Consensus 83 y~~~~~~~~F~~ 94 (116)
T Consensus 81 ~~ee~fg~gl~l 92 (93)
T TIGR01911 81 LREENFGKGLKL 92 (93)
T ss_pred EECCCCCCCEEE
T ss_conf 611337352030