HHsearch alignment for GI: 254781064 and conserved domain: TIGR03341
>TIGR03341 YhgI_GntY IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization.
Probab=99.96 E-value=1.4e-28 Score=181.35 Aligned_cols=96 Identities=24% Similarity=0.364 Sum_probs=89.2
Q ss_pred EEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEHHHH-CCCCCCCCEECCCCEEEEECHHHHHHHCCCEEEE
Q ss_conf 652689999999999717998618999984798787113200110-0210122201246839999787732006989976
Q gi|254781064|r 5 VTMTEAAVYRIKEIVFNSQGKAQGIRISLKKGGCAGLEYMVDLVT-DNPVDGDDLIEKDGVKVWIDSASLLYMLGTEIDF 83 (116)
Q Consensus 5 i~IT~~A~~~i~~l~~~~~~~~~~lRi~v~~gGC~G~~Y~l~~~~-~~~~~~D~~~~~~g~~i~id~~s~~~L~g~~IDy 83 (116)
T Consensus 1 ItITe~A~~~l~~Ll~~q~-~g~~lRv~V~~~Gcsg~qy~l~f~~~de~~~dD~~~e~~g~~V~VD~~S~~yL~Ga~IDy 79 (190)
T TIGR03341 1 ITITEAAQAYLAKLLAKQN-EGTGIRVFVVNPGTPYAECCVSYCPPDEVEPSDIKLEFNGFSAYVDALSAPFLEDAVIDF 79 (190)
T ss_pred CEECHHHHHHHHHHHHCCC-CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCEEEEECCCHHHHHCCCEEEE
T ss_conf 9778999999999984088-895689999559999858887888877789987899849989998425467867889976
Q ss_pred ECCCCCCEEEEECCCCCC
Q ss_conf 317744512898888787
Q gi|254781064|r 84 KTEKLYSGFVFHNPNQVS 101 (116)
Q Consensus 84 ~~~~~~~~F~~~NPna~~ 101 (116)
T Consensus 80 ~~d~~g~gfti~NPNAK~ 97 (190)
T TIGR03341 80 VTDRMGGQLTLKAPNAKM 97 (190)
T ss_pred ECCCCCCEEEEECCCCCC
T ss_conf 336768728997999765