HHsearch alignment for GI: 254781064 and conserved domain: pfam05610

Probab=93.86  E-value=0.34  Score=27.72  Aligned_cols=79  Identities=23%  Similarity=0.280  Sum_probs=52.2

Q ss_pred             HHHHHHHCCCCCCEEEEEEECCCCCCCEEEEHHHHC--CCCCCCCEE-CCCCEEEEECHHHHHHHCCC--EEEEECCCCC
Q ss_conf             999997179986189999847987871132001100--210122201-24683999978773200698--9976317744
Q gi|254781064|r   15 IKEIVFNSQGKAQGIRISLKKGGCAGLEYMVDLVTD--NPVDGDDLI-EKDGVKVWIDSASLLYMLGT--EIDFKTEKLY   89 (116)
Q Consensus        15 i~~l~~~~~~~~~~lRi~v~~gGC~G~~Y~l~~~~~--~~~~~D~~~-~~~g~~i~id~~s~~~L~g~--~IDy~~~~~~   89 (116)
T Consensus         3 i~~L~~~HG-~---L-mFHQSGGCCDGSaPMC~p~gef~vg~~DV~LG~i~g~pfym~~~QfeyWkhT~l~iDvv~-GrG   76 (95)
T pfam05610         3 IRELKAKHG-P---L-MFHQSGGCCDGSAPMCYPKGEFIVGDSDVLLGEIGGVPFYISKSQFEYWKHTQLIIDVVP-GRG   76 (95)
T ss_pred             HHHHHHHHC-C---E-EEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEECCEEEEECCHHHHHHHCCEEEEEEEC-CCC
T ss_conf             899987618-8---8-884079756898754034665052887678888669888983389876423679999862-678


Q ss_pred             CEEEEECCCC
Q ss_conf             5128988887
Q gi|254781064|r   90 SGFVFHNPNQ   99 (116)
Q Consensus        90 ~~F~~~NPna   99 (116)
T Consensus        77 ~~FSLE~p~G   86 (95)
T pfam05610        77 GMFSLEGPEG   86 (95)
T ss_pred             CEEEECCCCC
T ss_conf             7577148888