HHsearch alignment for GI: 254781065 and conserved domain: COG0621
>COG0621 MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].
Probab=98.95 E-value=1.8e-07 Score=73.79 Aligned_cols=188 Identities=20% Similarity=0.312 Sum_probs=128.5
Q ss_pred EECCCEEEEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC----CC--HHHHHH
Q ss_conf 520753799972743000001122330125555678989999999999729974799972698132----49--899999
Q gi|254781065|r 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI----LS--HKRLQK 164 (352)
Q Consensus 91 hkY~~rvLl~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~----l~--~~~L~~ 164 (352)
T Consensus 140 ~~~~~~A~v~I~eGCn~~CtfCiiP~~RG~~r-Sr~-~e~Il~ev~~Lv-~~G~kEI~L~gqdv~aYG~D~~~~~~~l~~ 216 (437)
T COG0621 140 REGGVRAFVKIQEGCNKFCTFCIIPYARGKER-SRP-PEDILKEVKRLV-AQGVKEIVLTGQDVNAYGKDLGGGKPNLAD 216 (437)
T ss_pred CCCCEEEEEEHHCCCCCCCCEEEEECCCCCCC-CCC-HHHHHHHHHHHH-HCCCEEEEEEEEEHHHCCCCCCCCCCCHHH
T ss_conf 67874799881208678888064053678755-779-899999999999-889749999988110104467777668999
Q ss_pred HHHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCC---CEEEEECCCCHHHC--------CHHHHHHHHHHHHC
Q ss_conf 99998619981289874343563434339999999862599---38999336995886--------99999999999987
Q gi|254781065|r 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIHANHPYEF--------SEEAIAAISRLANA 233 (352)
Q Consensus 165 ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~---~~~iv~H~NHp~El--------t~~~~~A~~~L~~~ 233 (352)
T Consensus 217 Ll~~l~~I~G~~riR~~~----~~P~~~~d~lIe~~~~~~kv~~~lHlPvQsGsd~ILk~M~R~yt~e~~~~~i~k~R~~ 292 (437)
T COG0621 217 LLRELSKIPGIERIRFGS----SHPLEFTDDLIEAIAETPKVCPHLHLPVQSGSDRILKRMKRGYTVEEYLEIIEKLRAA 292 (437)
T ss_pred HHHHHHCCCCCEEEEEEC----CCCHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 999996079910899935----8800118899999865784143446755569879999737876799999999999986
Q ss_pred CC-EEEECHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 98-98232798623457889999999999986982423011345765210118
Q gi|254781065|r 234 GI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 (352)
Q Consensus 234 Gv-~v~nQsVLLkgVND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf~v 285 (352)
T Consensus 293 ~Pd~~i~tDiIVGFPgETEedFe~tl~lv~e~~fd~~~~F~YSpRpGTpAa~~ 345 (437)
T COG0621 293 RPDIAISTDIIVGFPGETEEDFEETLDLVEEVRFDRLHVFKYSPRPGTPAALM 345 (437)
T ss_pred CCCCEEECCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
T ss_conf 89856752679979999999999999999974888785330489999821137