HHsearch alignment for GI: 254781065 and conserved domain: COG1180

>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones].
Probab=98.38  E-value=1.5e-05  Score=60.39  Aligned_cols=173  Identities=20%  Similarity=0.313  Sum_probs=111.9

Q ss_pred             CCEEECCCEEEEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHH-HHHHHHHHHCC-CEEEEEEECCCCCCCCHHHHHHH
Q ss_conf             71452075379997274300000112233012555567898999-99999997299-74799972698132498999999
Q gi|254781065|r   88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKV  165 (352)
Q Consensus        88 gl~hkY~~rvLl~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~-~~~~~Yi~~~~-eI~eVilSGGDPl~l~~~~L~~l  165 (352)
T Consensus        28 ~~~d~~g~~~~~vf~~GCnlrC~~C~N~~~~~~--~~~~~~~~~~~e~l~~~~~~~~~~~gvt~SGGEP~~-q~e~~~~~  104 (260)
T COG1180          28 PLVDGPGSIRLSVFLQGCNLRCPYCQNPEISQR--GREVSGEEVSPEVLVDKAFYSESGGGVTFSGGEPTL-QAEFALDL  104 (260)
T ss_pred             CCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHC--CCCCCHHHCCHHHHHHHHHHCCCCCEEEEECCHHHH-HHHHHHHH
T ss_conf             774679844999987898998998979467606--565656457898999987431699889998960444-39999999


Q ss_pred             HHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEE-CCCCH--HHC----CHHHHHHHHHHHHCCCEEE
Q ss_conf             9998619981289874343563434339999999862599389993-36995--886----9999999999998798982
Q gi|254781065|r  166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHP--YEF----SEEAIAAISRLANAGIILL  238 (352)
Q Consensus       166 l~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~-H~NHp--~El----t~~~~~A~~~L~~~Gv~v~  238 (352)
T Consensus       105 ~~~ake~-Gl~-~~l~TnG--~~~~~~~~~l~~~~D~----v~~DlK~~~~~~yr~~tg~~~~~vl~~~~~l~~~g~~ve  176 (260)
T COG1180         105 LRAAKER-GLH-VALDTNG--FLPPEALEELLPLLDA----VLLDLKAFDDELYRKLTGADNEPVLENLELLADLGVHVE  176 (260)
T ss_pred             HHHHHHC-CCE-EEEECCC--CCCHHHHHHHHHHCCC----EEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
T ss_conf             9999987-990-8997689--9882689999974231----488406688788898756871688999999861798399


Q ss_pred             ECHHHHHCCCCCHHHHHHHHHHHHHC-CCEEEEE
Q ss_conf             32798623457889999999999986-9824230
Q gi|254781065|r  239 SQSVLLKGINDDPEILANLMRTFVEL-RIKPYYL  271 (352)
Q Consensus       239 nQsVLLkgVND~~~~l~~L~~~L~~~-gV~PYYl  271 (352)
T Consensus       177 ~r~lviPg~~d~~e~i~~i~~~i~~~~~~~p~~~  210 (260)
T COG1180         177 IRTLVIPGYNDDEEEIRELAEFIADLGPEIPIHL  210 (260)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             9887338988999999999999973086665587