HHsearch alignment for GI: 254781065 and conserved domain: COG1180
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones].
Probab=98.38 E-value=1.5e-05 Score=60.39 Aligned_cols=173 Identities=20% Similarity=0.313 Sum_probs=111.9
Q ss_pred CCEEECCCEEEEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHH-HHHHHHHHHCC-CEEEEEEECCCCCCCCHHHHHHH
Q ss_conf 71452075379997274300000112233012555567898999-99999997299-74799972698132498999999
Q gi|254781065|r 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKV 165 (352)
Q Consensus 88 gl~hkY~~rvLl~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~-~~~~~Yi~~~~-eI~eVilSGGDPl~l~~~~L~~l 165 (352)
T Consensus 28 ~~~d~~g~~~~~vf~~GCnlrC~~C~N~~~~~~--~~~~~~~~~~~e~l~~~~~~~~~~~gvt~SGGEP~~-q~e~~~~~ 104 (260)
T COG1180 28 PLVDGPGSIRLSVFLQGCNLRCPYCQNPEISQR--GREVSGEEVSPEVLVDKAFYSESGGGVTFSGGEPTL-QAEFALDL 104 (260)
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHC--CCCCCHHHCCHHHHHHHHHHCCCCCEEEEECCHHHH-HHHHHHHH
T ss_conf 774679844999987898998998979467606--565656457898999987431699889998960444-39999999
Q ss_pred HHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEE-CCCCH--HHC----CHHHHHHHHHHHHCCCEEE
Q ss_conf 9998619981289874343563434339999999862599389993-36995--886----9999999999998798982
Q gi|254781065|r 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHP--YEF----SEEAIAAISRLANAGIILL 238 (352)
Q Consensus 166 l~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~-H~NHp--~El----t~~~~~A~~~L~~~Gv~v~ 238 (352)
T Consensus 105 ~~~ake~-Gl~-~~l~TnG--~~~~~~~~~l~~~~D~----v~~DlK~~~~~~yr~~tg~~~~~vl~~~~~l~~~g~~ve 176 (260)
T COG1180 105 LRAAKER-GLH-VALDTNG--FLPPEALEELLPLLDA----VLLDLKAFDDELYRKLTGADNEPVLENLELLADLGVHVE 176 (260)
T ss_pred HHHHHHC-CCE-EEEECCC--CCCHHHHHHHHHHCCC----EEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 9999987-990-8997689--9882689999974231----488406688788898756871688999999861798399
Q ss_pred ECHHHHHCCCCCHHHHHHHHHHHHHC-CCEEEEE
Q ss_conf 32798623457889999999999986-9824230
Q gi|254781065|r 239 SQSVLLKGINDDPEILANLMRTFVEL-RIKPYYL 271 (352)
Q Consensus 239 nQsVLLkgVND~~~~l~~L~~~L~~~-gV~PYYl 271 (352)
T Consensus 177 ~r~lviPg~~d~~e~i~~i~~~i~~~~~~~p~~~ 210 (260)
T COG1180 177 IRTLVIPGYNDDEEEIRELAEFIADLGPEIPIHL 210 (260)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 9887338988999999999999973086665587