HHsearch alignment for GI: 254781065 and conserved domain: COG1244
>COG1244 Predicted Fe-S oxidoreductase [General function prediction only].
Probab=93.06 E-value=0.93 Score=26.44 Aligned_cols=219 Identities=21% Similarity=0.288 Sum_probs=127.8
Q ss_pred CCCEEECCCEEE--EEECCCCCCH----HHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCC------EEEEEEEC--C
Q ss_conf 871452075379--9972743000----00112233012555567898999999999972997------47999726--9
Q gi|254781065|r 87 KGIVHRYPDRIL--LKLLHVCPVY----CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFTG--G 152 (352)
Q Consensus 87 pgl~hkY~~rvL--l~~t~~C~~~----CryCfR~~~~~~~~~~~~~~~~~~~~~~Yi~~~~e------I~eVilSG--G 152 (352)
T Consensus 37 ~d~~~g~~~k~l~vILrT~GC~w~~~~gC~MCg---Y~~d~~~~~vs~E~l~~qfd~~~~k~~~~~~~~~vkIFTSGSFL 113 (358)
T COG1244 37 EDRLRGYPGKSLTVILRTRGCRWYREGGCYMCG---YPADSAGEPVSEENLINQFDEAYSKYEGKFDEFVVKIFTSGSFL 113 (358)
T ss_pred CCCCCCCCCCEEEEEEECCCCCEECCCCCCEEC---CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
T ss_conf 464489767559999826883222058722426---55466889898899999999999972244787549997156658
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHC--CCCEEEEECCCCHHHC-----------
Q ss_conf 813249899999999986199812898743435634343399999998625--9938999336995886-----------
Q gi|254781065|r 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKPVYIAIHANHPYEF----------- 219 (352)
Q Consensus 153 DPl~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~--~~~~~iv~H~NHp~El----------- 219 (352)
T Consensus 114 D~~EVP~e~R~~Il~~is~~~~v~~vvvESR-----pE~I~eE~l~e~~~il~gk~~EvaIGLETanD~ire~sINKGft 188 (358)
T COG1244 114 DPEEVPREARRYILERISENDNVKEVVVESR-----PEFIREERLEEITEILEGKIVEVAIGLETANDKIREDSINKGFT 188 (358)
T ss_pred CHHHCCHHHHHHHHHHHHHCCCEEEEEEECC-----CHHCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCC
T ss_conf 9244887999999999752366027876047-----10127899999998608953899971244748899876513886
Q ss_pred CHHHHHHHHHHHHCCCEEEECHHHHHCCC-CCHHHHHHHHHHHHHCCCEEE----EEECCCCCCC--------CCCCCCC
Q ss_conf 99999999999987989823279862345-788999999999998698242----3011345765--------2101186
Q gi|254781065|r 220 SEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRTFVELRIKPY----YLHHPDLAAG--------TSHFRLT 286 (352)
Q Consensus 220 t~~~~~A~~~L~~~Gv~v~nQsVLLkgVN-D~~~~l~~L~~~L~~~gV~PY----Yl~~~d~v~G--------~~hf~v~ 286 (352)
T Consensus 189 F~df~~A~~~ir~~g~~vktY-lllKP~FlSE~eAI~D~i~Si~--~~~~~~d~iSinptnVqKgTlvE~lw~~g~YRPP 265 (358)
T COG1244 189 FEDFVRAAEIIRNYGAKVKTY-LLLKPPFLSEKEAIEDVISSIV--AAKPGTDTISINPTNVQKGTLVEKLWRRGLYRPP 265 (358)
T ss_pred HHHHHHHHHHHHHCCCCEEEE-EEECCCCCCHHHHHHHHHHHHH--HHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 899999999999749751578-8831653476889999999999--7436787588445422131099999973787895
Q ss_pred -HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCE
Q ss_conf -9999999999998288865410663178888823
Q gi|254781065|r 287 -IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 (352)
Q Consensus 287 -~~~~~~i~~~l~~~lsG~~~P~~v~d~p~~~GKv 320 (352)
T Consensus 266 wLWSivEVL~~~~~~~~~----~~i~sdp~G~gs~ 296 (358)
T COG1244 266 WLWSIVEVLREAKKTGPM----LRILSDPVGAGSD 296 (358)
T ss_pred HHHHHHHHHHHHHHCCCC----CCEEECCCCCCCC
T ss_conf 577999999999850888----7334147778887