HHsearch alignment for GI: 254781065 and conserved domain: COG1509

>COG1509 KamA Lysine 2,3-aminomutase [Amino acid transport and metabolism].
Probab=100.00  E-value=0  Score=882.44  Aligned_cols=349  Identities=41%  Similarity=0.770  Sum_probs=343.0

Q ss_pred             CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHCCCCHHHCCCCCCCCCCCCCC
Q ss_conf             93355224998899864199989999999998534843898899535899744501123269977801381335373100
Q gi|254781065|r    1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD   80 (352)
Q Consensus         1 ~Qlr~~~i~s~~~L~~~l~Ls~e~~~~~~~~~~~fp~~vtpyyl~LId~~dp~DPi~rQvlP~~~El~~~~~~~~DPl~E   80 (352)
T Consensus        18 ~q~~~-~i~~~~eL~~~~~l~~e~~e~~~~a~~~~~~ritpyy~~Lid~~np~dPirrQviP~~~El~~~~~~~~Dpl~E   96 (369)
T COG1509          18 WQLAN-AIRDPRELLEVLNLDEEELEGLERAAKLFALRITPYYLSLIDWGNPDDPIRRQVIPSEDELEKAPGESEDPLGE   96 (369)
T ss_pred             HHHHH-HHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCC
T ss_conf             99988-51789999987579978888899998515555888999753767898617762379889975143324686545


Q ss_pred             CCCCCCCCCEEECCCEEEEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHH
Q ss_conf             00076887145207537999727430000011223301255556789899999999997299747999726981324989
Q gi|254781065|r   81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK  160 (352)
Q Consensus        81 ~~~~p~pgl~hkY~~rvLl~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~  160 (352)
T Consensus        97 ~~~s~Vpgl~HrY~drvLll~t~~C~vyCRyCfRr~~~~~~~~~-~~~~~~~~al~YIa~hPeI~eVllSGGDPL~ls~~  175 (369)
T COG1509          97 DDSSPVPGLTHRYPDRVLLLVTGVCAVYCRYCFRRRFVGQDNQG-FNKEEWDKALDYIAAHPEIREVLLSGGDPLSLSDK  175 (369)
T ss_pred             CCCCCCCCCEEECCCEEEEEECCCCCCEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCHH
T ss_conf             56687887311058848999648664521000134555666566-78899999999997395165177407875636889


Q ss_pred             HHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHHCCHHHHHHHHHHHHCCCEEEEC
Q ss_conf             99999999861998128987434356343433999999986259938999336995886999999999999879898232
Q gi|254781065|r  161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ  240 (352)
Q Consensus       161 ~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~Elt~~~~~A~~~L~~~Gv~v~nQ  240 (352)
T Consensus       176 ~L~~ll~~L~~IpHv~iiRi~TR~pvv~P~RIt~~L~~~l~~~~~~v~~~tH~NHp~Eit~e~~~A~~~L~~aGv~l~NQ  255 (369)
T COG1509         176 KLEWLLKRLRAIPHVKIIRIGTRLPVVLPQRITDELCEILGKSRKPVWLVTHFNHPNEITPEAREACAKLRDAGVPLLNQ  255 (369)
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCCCEECHHHHCHHHHHHHHCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHCCCEEECC
T ss_conf             99999998754896469986246743154440699999872358607998035883546899999999999759565324


Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCE
Q ss_conf             79862345788999999999998698242301134576521011869999999999998288865410663178888823
Q gi|254781065|r  241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV  320 (352)
Q Consensus       241 sVLLkgVND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf~v~~~~~~~i~~~l~~~lsG~~~P~~v~d~p~~~GKv  320 (352)
T Consensus       256 sVLLrGVND~~evl~~L~~~L~~~gV~PYYl~~~D~~~G~~hfr~~i~~~~~i~~~lr~~~SG~~~P~~v~d~pgg~gK~  335 (369)
T COG1509         256 SVLLRGVNDDPEVLKELSRALFDAGVKPYYLHQLDLVQGAAHFRVPIAEGLQIVEELRGRTSGYAVPTLVVDIPGGGGKT  335 (369)
T ss_pred             HHEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
T ss_conf             10114667999999999999997488621785167667723351409999999999997577766531578668998765


Q ss_pred             EECCHHHEEECCCEEEEECCCCCEEECCCCC
Q ss_conf             5551021231398799981699887189889
Q gi|254781065|r  321 KIDTHNIKKVGNGSYCITDHHNIVHDYPPKS  351 (352)
Q Consensus       321 ~i~~~~~~~~~~~~~~l~~~~g~~~~yp~~~  351 (352)
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~g~~~~Yp~~~  366 (369)
T COG1509         336 PLAPNYRESQSYGKRVLRNFEGKIMTYPEPL  366 (369)
T ss_pred             CCCCHHHHHCCCCEEEEECCCCCEEECCCCC
T ss_conf             4671477726787077645888268558987