HHsearch alignment for GI: 254781065 and conserved domain: PRK05301

>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional.
Probab=99.28  E-value=4.5e-10  Score=92.23  Aligned_cols=202  Identities=19%  Similarity=0.303  Sum_probs=135.8

Q ss_pred             CCEEEEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf             75379997274300000112233012555567898999999999972997479997269813249899999999986199
Q gi|254781065|r   94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK  173 (352)
Q Consensus        94 ~~rvLl~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~  173 (352)
T Consensus        16 P~~v~~elT~~CNL~C~hCy~~~~~~~-~~~ELs~~e~~~~id~l~~~-Gv~~v~~tGGEPllr~D--~~ei~~~a~~~G   91 (375)
T PRK05301         16 PLWLLAELTYRCPLQCPYCSNPLDLAR-HGAELSTAEWIRVLREARAL-GVLQLHFSGGEPLLRKD--LEELVAHARRLG   91 (375)
T ss_pred             CEEEEEHHHCHHCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCC--HHHHHHHHHHCC
T ss_conf             728435731400787846698500487-65789999999999999986-99889961865245668--999999999769


Q ss_pred             CCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHH-HC----------CHHHHHHHHHHHHCCCEEEECHH
Q ss_conf             81289874343563434339999999862599389993369958-86----------99999999999987989823279
Q gi|254781065|r  174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY-EF----------SEEAIAAISRLANAGIILLSQSV  242 (352)
Q Consensus       174 hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~-El----------t~~~~~A~~~L~~~Gv~v~nQsV  242 (352)
T Consensus        92 -~~-~~l~TNG-----~lit~~~a~~L~~~gl~-~v~vSlDg~~~e~hD~~rG~~G~f~~~~~~i~~l~~~Gi~v~i~~t  163 (375)
T PRK05301         92 -LY-TNLITSG-----VGLTEARLAALKAAGLD-HIQLSFQDSDPELADRIAGTRGAFAQKLEVARLVKAHGYPLTLNAV  163 (375)
T ss_pred             -CE-EEEEECC-----CCCCHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             -75-8996067-----45579999999850998-8999567798778777637886299999999999974981699987


Q ss_pred             HHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC----CCCCCCCC---HHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf             862345788999999999998698242301134576----52101186---999999999999828886541066
Q gi|254781065|r  243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT---IEEGQKIVASLKEKISGLCQPFYI  310 (352)
Q Consensus       243 LLkgVND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~----G~~hf~v~---~~~~~~i~~~l~~~lsG~~~P~~v  310 (352)
T Consensus       164 i~r~N~~~l~~i~~la---~~lGv~~~~l~~~~~~Gr~~~~r~~L~pt~e~~~~~~~~~~~~~~~~~~~~~i~~~  235 (375)
T PRK05301        164 IHRHNIDQIPRIIELA---VELGADRLELANTQYYGWALLNRAALMPTREQLERAERIVEEARERLGGRLKIDFV  235 (375)
T ss_pred             ECCCCHHHHHHHHHHH---HHCCCCEEEEEEEEEECCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             2305688899999999---97299828987656751021166653799999999999999999986388603455