HHsearch alignment for GI: 254781065 and conserved domain: PRK05301
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional.
Probab=99.28 E-value=4.5e-10 Score=92.23 Aligned_cols=202 Identities=19% Similarity=0.303 Sum_probs=135.8
Q ss_pred CCEEEEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 75379997274300000112233012555567898999999999972997479997269813249899999999986199
Q gi|254781065|r 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173 (352)
Q Consensus 94 ~~rvLl~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~ 173 (352)
T Consensus 16 P~~v~~elT~~CNL~C~hCy~~~~~~~-~~~ELs~~e~~~~id~l~~~-Gv~~v~~tGGEPllr~D--~~ei~~~a~~~G 91 (375)
T PRK05301 16 PLWLLAELTYRCPLQCPYCSNPLDLAR-HGAELSTAEWIRVLREARAL-GVLQLHFSGGEPLLRKD--LEELVAHARRLG 91 (375)
T ss_pred CEEEEEHHHCHHCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCC--HHHHHHHHHHCC
T ss_conf 728435731400787846698500487-65789999999999999986-99889961865245668--999999999769
Q ss_pred CCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHH-HC----------CHHHHHHHHHHHHCCCEEEECHH
Q ss_conf 81289874343563434339999999862599389993369958-86----------99999999999987989823279
Q gi|254781065|r 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY-EF----------SEEAIAAISRLANAGIILLSQSV 242 (352)
Q Consensus 174 hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~-El----------t~~~~~A~~~L~~~Gv~v~nQsV 242 (352)
T Consensus 92 -~~-~~l~TNG-----~lit~~~a~~L~~~gl~-~v~vSlDg~~~e~hD~~rG~~G~f~~~~~~i~~l~~~Gi~v~i~~t 163 (375)
T PRK05301 92 -LY-TNLITSG-----VGLTEARLAALKAAGLD-HIQLSFQDSDPELADRIAGTRGAFAQKLEVARLVKAHGYPLTLNAV 163 (375)
T ss_pred -CE-EEEEECC-----CCCCHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf -75-8996067-----45579999999850998-8999567798778777637886299999999999974981699987
Q ss_pred HHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC----CCCCCCCC---HHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 862345788999999999998698242301134576----52101186---999999999999828886541066
Q gi|254781065|r 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT---IEEGQKIVASLKEKISGLCQPFYI 310 (352)
Q Consensus 243 LLkgVND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~----G~~hf~v~---~~~~~~i~~~l~~~lsG~~~P~~v 310 (352)
T Consensus 164 i~r~N~~~l~~i~~la---~~lGv~~~~l~~~~~~Gr~~~~r~~L~pt~e~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (375)
T PRK05301 164 IHRHNIDQIPRIIELA---VELGADRLELANTQYYGWALLNRAALMPTREQLERAERIVEEARERLGGRLKIDFV 235 (375)
T ss_pred ECCCCHHHHHHHHHHH---HHCCCCEEEEEEEEEECCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 2305688899999999---97299828987656751021166653799999999999999999986388603455