HHsearch alignment for GI: 254781065 and conserved domain: PRK05628
>PRK05628 coproporphyrinogen III oxidase; Validated.
Probab=98.24 E-value=0.00045 Score=49.84 Aligned_cols=211 Identities=18% Similarity=0.242 Sum_probs=133.0
Q ss_pred EEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHH-HHHH-------HHHH-HCCCEEEEEEECCCCCCCCHHHHHHHHHH
Q ss_conf 9997274300000112233012555567898999-9999-------9997-29974799972698132498999999999
Q gi|254781065|r 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAAL-------AYIQ-EKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 (352)
Q Consensus 98 Ll~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~-~~~~-------~Yi~-~~~eI~eVilSGGDPl~l~~~~L~~ll~~ 168 (352)
T Consensus 5 LYiHiPFC~~~C~yC~f~~~~~~~~~~~~~~~~Y~~~L~~Ei~~~~~~l~~~~~~i~tiy~GGGTPs~L~~~~l~~l~~~ 84 (376)
T PRK05628 5 VYVHVPFCATRCGYCDFNTYTAAELGGGASPDGYLDALRAELELAAAVLGDPAPPVSTVFVGGGTPSLLGAEGLARVLDA 84 (376)
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCHHHHHHHHHH
T ss_conf 99870576460899979573365247876799999999999999987617789657899978944664899999999999
Q ss_pred HHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCC-CEEEEECCCCHHHC--------CHHHHHHHHHHHHCCCEEEE
Q ss_conf 8619981289874343563434339999999862599-38999336995886--------99999999999987989823
Q gi|254781065|r 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEF--------SEEAIAAISRLANAGIILLS 239 (352)
Q Consensus 169 L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~-~~~iv~H~NHp~El--------t~~~~~A~~~L~~~Gv~v~n 239 (352)
T Consensus 85 i~~~f~~~~~~--EiTiE~nP~~~~~~~l~~l~~~GvnRiSlGvQsf~~~~l~~lgR~h~~~~~~~~~~~~~~~gf~~in 162 (376)
T PRK05628 85 VRDTFGLAPDA--EVTTEANPESTSPEFFAALRAAGYTRVSLGMQSAAPHVLAVLDRTHTPGRAVAAAREARAAGFEHVN 162 (376)
T ss_pred HHHHCCCCCCC--EEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEE
T ss_conf 99758999885--6999834265899999999974987599951558999999749999989999999999875997255
Q ss_pred CHHHHHCC-CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC--------C-CHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf 27986234-5788999999999998698242301134576521011--------8-699999999999982888654106
Q gi|254781065|r 240 QSVLLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR--------L-TIEEGQKIVASLKEKISGLCQPFY 309 (352)
Q Consensus 240 QsVLLkgV-ND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf~--------v-~~~~~~~i~~~l~~~lsG~~~P~~ 309 (352)
T Consensus 163 ~D-LIyGlP~Qt~~~~~~~l~~~~~l~p~his~Y~l~~e~~t~~~~~~~~~~l~~p~e~~~~~~~~~~~~~L~~~Gy~~y 241 (376)
T PRK05628 163 LD-LIYGTPGETDDDLRRSLDAALEAGVDHVSAYALIVEDGTALARRVRRGELPAPDDDVLADRYELADARLSAAGFDWY 241 (376)
T ss_pred EE-EECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 55-44279999999999999999732898156655565478677777751789999999999999999999984787617
Q ss_pred EE
Q ss_conf 63
Q gi|254781065|r 310 IL 311 (352)
Q Consensus 310 v~ 311 (352)
T Consensus 242 ei 243 (376)
T PRK05628 242 EV 243 (376)
T ss_pred EE
T ss_conf 62