HHsearch alignment for GI: 254781065 and conserved domain: PRK06245
>PRK06245 cofG FO synthase subunit 1; Reviewed.
Probab=95.79 E-value=0.086 Score=33.76 Aligned_cols=204 Identities=21% Similarity=0.273 Sum_probs=101.4
Q ss_pred CCCEEEEEECCCCCCHHHCC-CCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHH------
Q ss_conf 07537999727430000011-22330125555678989999999999729974799972698132498999999------
Q gi|254781065|r 93 YPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV------ 165 (352)
Q Consensus 93 Y~~rvLl~~t~~C~~~CryC-fR~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~l------ 165 (352)
T Consensus 10 y~~n~~In~TNiC~~~C~fCaF~~~-~~--~a~~ls~eev~~~~~ea~~-~G~tEvl~~gG~~P~~~~~~~~~l~~~~~~ 85 (336)
T PRK06245 10 YSRNVFIPLTYECRNRCGYCTFRPD-PG--EASLLSPEEVREILERGQD-AGCTEALFTFGEVPDESEEIREQLAEPGYS 85 (336)
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCC-CC--CCCCCCHHHHHHHHHHHHH-CCCEEEEEECCCCCCCCHHHHHHHHHHCCC
T ss_conf 8186261677540268825867468-87--5687799999999999997-698399980578866368999999970755
Q ss_pred --HHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCC-----------CEEEEECCCCHHHCCHHHHHHHHHHHH
Q ss_conf --9998619981289874343563434339999999862599-----------389993369958869999999999998
Q gi|254781065|r 166 --LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-----------PVYIAIHANHPYEFSEEAIAAISRLAN 232 (352)
Q Consensus 166 --l~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~-----------~~~iv~H~NHp~Elt~~~~~A~~~L~~ 232 (352)
T Consensus 86 ~~~~~~~~~~~~~-le~-gllph~n~G~ls~~el~~Lk~v~asmG~mlE~~se~l~~~~h~~~P~K~~~~rL~~ie~Ah~ 163 (336)
T PRK06245 86 SWLEYLYDLCELA-LET-GLLPHTNAGILSRAEMEALKPVNASMGLMLEQTSPRLLETVHRHSPGKDPELRLETIEWAGE 163 (336)
T ss_pred HHHHHHHHHHHHH-HHH-CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 0778899985888-763-65522366767899999875359766757123568988763044898788999999999998
Q ss_pred CCCEEEECHHHHHCCCCCHHHHHHHHHHHHHC-----CCEEEEE--ECCCCCCCCC-CCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 79898232798623457889999999999986-----9824230--1134576521-01186999999999999828886
Q gi|254781065|r 233 AGIILLSQSVLLKGINDDPEILANLMRTFVEL-----RIKPYYL--HHPDLAAGTS-HFRLTIEEGQKIVASLKEKISGL 304 (352)
Q Consensus 233 ~Gv~v~nQsVLLkgVND~~~~l~~L~~~L~~~-----gV~PYYl--~~~d~v~G~~-hf~v~~~~~~~i~~~l~~~lsG~ 304 (352)
T Consensus 164 lgIp--tTatmL~G~gET~eeRi~hL~~IR~lq~~tGgfqefI~~~F~p~~~t~m~~~~~~~~~e~l~~iAvARiiL~~~ 241 (336)
T PRK06245 164 LKIP--FTTGLLIGIGETWEDRIESLEAIAELHERYGHIQEVIIQNFRPKPGIPMENHPEPSPEEMPRVVALARLILPPD 241 (336)
T ss_pred CCCC--CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 3997--22024520669999999999999998863497579950687789875334699979999999999999966998