HHsearch alignment for GI: 254781065 and conserved domain: PRK06294
>PRK06294 coproporphyrinogen III oxidase; Provisional.
Probab=98.34 E-value=0.00017 Score=52.88 Aligned_cols=197 Identities=18% Similarity=0.237 Sum_probs=130.6
Q ss_pred EEEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHHHHHHHH-------HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf 79997274300000112233012555567898999999999-------97299747999726981324989999999998
Q gi|254781065|r 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY-------IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 (352)
Q Consensus 97 vLl~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~~~~~~Y-------i~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L 169 (352)
T Consensus 8 sLYiHIPFC~~~C~yC~f~~~~~~-~-~-~~~~Y~~al~~e~~~~~~~~~~~~~~~tiy~GGGTPs~L~~~~L~~ll~~i 84 (374)
T PRK06294 8 ALYIHIPFCSKKCHYCSFYTIPYK-E-E-SVSLYCNAVIKEGLKKLAPLRCTHFIDTVFFGGGTPSLVPPDLIQDILKTL 84 (374)
T ss_pred EEEEECCCCCCCCCCCCCEEECCC-C-C-CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHH
T ss_conf 899862789987999988102488-2-3-399999999999999976434898179999789701638899999999974
Q ss_pred HCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCC-CEEEEECCCCHHHC--------CHHHHHHHHHHHHCCCEEEEC
Q ss_conf 619981289874343563434339999999862599-38999336995886--------999999999999879898232
Q gi|254781065|r 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEF--------SEEAIAAISRLANAGIILLSQ 240 (352)
Q Consensus 170 ~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~-~~~iv~H~NHp~El--------t~~~~~A~~~L~~~Gv~v~nQ 240 (352)
T Consensus 85 ~~~~~~E-~-----TiE~nP~~~~~~~l~~l~~~GinRlSlGVQsf~d~~l~~lgR~h~~~~~~~~i~~~~~~gf~~ini 158 (374)
T PRK06294 85 EAPHATE-I-----TLEANPENLSFSYLRALAQTPINRISIGVQTFDDPLLKLLGRTHSSSAAIEAVLECYEHGFSNLSI 158 (374)
T ss_pred CCCCCCE-E-----EEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf 0168843-8-----998534769999999999729875989721076788987389999999999999999759974332
Q ss_pred HHHHHCC-CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC--------C-CHHHHHHHHHHHHHHCCC
Q ss_conf 7986234-5788999999999998698242301134576521011--------8-699999999999982888
Q gi|254781065|r 241 SVLLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR--------L-TIEEGQKIVASLKEKISG 303 (352)
Q Consensus 241 sVLLkgV-ND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf~--------v-~~~~~~~i~~~l~~~lsG 303 (352)
T Consensus 159 D-LIyGlPgQt~~~~~~~l~~~~~l~p~hiS~Y~L~iep~t~~~~~~~~~~~~~p~~~~~~~~~~~~~~~L~~ 230 (374)
T PRK06294 159 D-LIYGLPTQSLSDFIMDLHQALTLPITHISLYNLTIDPHTSFYKHRKILLPSIADEDILAEMSLAAEELLTS 230 (374)
T ss_pred E-EECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 1-10478888889999999999734967455555576589658886133899998999999999999999997