HHsearch alignment for GI: 254781065 and conserved domain: PRK08599

Probab=97.78  E-value=0.0052  Score=42.35  Aligned_cols=197  Identities=17%  Similarity=0.256  Sum_probs=124.1

Q ss_pred             EEEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHH-HHHHHHHH-----HCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
Q ss_conf             79997274300000112233012555567898999-99999997-----2997479997269813249899999999986
Q gi|254781065|r   97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQ-----EKSQIWEVIFTGGDPLILSHKRLQKVLKTLR  170 (352)
Q Consensus        97 vLl~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~-~~~~~Yi~-----~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~  170 (352)
T Consensus         3 ~lYiHIPFC~~~C~yC~f~~~~~~-~~---~~~~Y~~aL~~Ei~~~~~~~~~~~~tiy~GGGTPs~L~~~~l~~ll~~i~   78 (377)
T PRK08599          3 SAYIHIPFCEHICYYCDFNKVFIE-NQ---PVDEYLDALIKEMESTVAKYIRKLKTIYIGGGTPTALSAEQLERLLNAIH   78 (377)
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCC-CC---CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf             899972789986899969164689-87---79999999999999765514995579997998100099999999999999


Q ss_pred             CC-C--CCEEEEEECCEEEEEHHHCCHHHHHHHHHCCC-CEEEEECCCCHHHC--------CHHHHHHHHHHHHCCCEEE
Q ss_conf             19-9--81289874343563434339999999862599-38999336995886--------9999999999998798982
Q gi|254781065|r  171 YI-K--HVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEF--------SEEAIAAISRLANAGIILL  238 (352)
Q Consensus       171 ~i-~--hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~-~~~iv~H~NHp~El--------t~~~~~A~~~L~~~Gv~v~  238 (352)
T Consensus        79 ~~f~~~~~~EiT-----iE~nP~~~~~~~l~~l~~~GvNRiSlGvQsf~~~~l~~lgR~h~~~~~~~~i~~~r~~gf~~i  153 (377)
T PRK08599         79 RTLPLSDLEEFT-----FEANPGDLTKEKLQVLKDYGVNRISLGVQTFNDELLKKIGRTHNEEDVYESIANAKKAGFKNI  153 (377)
T ss_pred             HHCCCCCCCEEE-----EEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCE
T ss_conf             976977673279-----995515163999999997099879996535987999986899989999999999997599741


Q ss_pred             ECHHHHHCC-CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC--------CCCC-HHHHHHHHHHHHHHCCC
Q ss_conf             327986234-57889999999999986982423011345765210--------1186-99999999999982888
Q gi|254781065|r  239 SQSVLLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH--------FRLT-IEEGQKIVASLKEKISG  303 (352)
Q Consensus       239 nQsVLLkgV-ND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~h--------f~v~-~~~~~~i~~~l~~~lsG  303 (352)
T Consensus       154 ni-DLIyGlP~Qt~~~~~~~l~~~~~l~p~hiS~Y~L~ie~~t~~~~~~~~g~~~lp~~d~~~~m~~~~~~~L~~  227 (377)
T PRK08599        154 SI-DLIYALPGQTIEDVKESLDKALALDIPHYSLYSLILEPKTVFYNLMRKGKLRLPTEDLEAEMYEYLMSEMEK  227 (377)
T ss_pred             EE-EEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             15-654278889899999999999730636345544233588768888755987899979999999999999997