HHsearch alignment for GI: 254781065 and conserved domain: PRK08629

>PRK08629 coproporphyrinogen III oxidase; Provisional.
Probab=97.07  E-value=0.04  Score=36.11  Aligned_cols=218  Identities=13%  Similarity=0.171  Sum_probs=133.0

Q ss_pred             CCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHH-HHH---HHHHHH-CCCEEEE
Q ss_conf             35373100000768871452075379997274300000112233012555567898999-999---999972-9974799
Q gi|254781065|r   73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAA---LAYIQE-KSQIWEV  147 (352)
Q Consensus        73 ~~~DPl~E~~~~p~pgl~hkY~~rvLl~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~-~~~---~~Yi~~-~~eI~eV  147 (352)
T Consensus        25 ~~~~~~~~~-~~~~~~~~~~~---~LYiHIPFC~~~C~YC~F~~~~~~~~---~-~~~Y~~aL~kEi~~~~~~~~~i~ti   96 (424)
T PRK08629         25 LRLDTLSAP-MMPAPVEGKKY---MLYAHVPFCHTLCPYCSFHRFLFKED---K-ARAYFISLRKEMEMVKELGYDFESM   96 (424)
T ss_pred             CCCCCCCCC-CCCCCCCCCEE---EEEEECCCCCCCCCCCCCCCCCCCCC---H-HHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf             786534556-68999999856---89989054079888998958268824---1-9999999999999988539983769


Q ss_pred             EEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHHCC-------
Q ss_conf             9726981324989999999998619981289874343563434339999999862599389993369958869-------
Q gi|254781065|r  148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS-------  220 (352)
Q Consensus       148 ilSGGDPl~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~Elt-------  220 (352)
T Consensus        97 y~GGGTPs~L~~-~l~~~l~~~~~~f~~~Ei-----TiE~nP~~~~~~~l~~l~~~vNRiSlGVQsf~~~~L~~lgR~h~  170 (424)
T PRK08629         97 YVGGGTTTILED-ELAKTLELAKKLFSIKEV-----SCESDPNHLDPPGLKQLKGLIDRLSIGVQSFNDDILKMVDRYEK  170 (424)
T ss_pred             EECCCHHHCCHH-HHHHHHHHHHHHCCCCEE-----EEECCCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCCC
T ss_conf             977971225799-999999999864898249-----99538686899999999864251666236699889998099998


Q ss_pred             -HHHHHHHHHHHHCCCEEEE-CHHHHHCCC-CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC-----CCCCHHH-HH
Q ss_conf             -9999999999987989823-279862345-7889999999999986982423011345765210-----1186999-99
Q gi|254781065|r  221 -EEAIAAISRLANAGIILLS-QSVLLKGIN-DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-----FRLTIEE-GQ  291 (352)
Q Consensus       221 -~~~~~A~~~L~~~Gv~v~n-QsVLLkgVN-D~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~h-----f~v~~~~-~~  291 (352)
T Consensus       171 ~~~~~~~~~~~~~a~~~f~niniDLIyGlP~QT~~~~~~~l~~~~~l~p~hIS~Y~L~iep~t~~~~~~~l~~p~~d~~~  250 (424)
T PRK08629        171 FGSGQETFEKIMAAKGLFPIINVDLIFNFPGQTDEVLQHDLDIAKRLDPRQITTYPLMKSHQTRKSVKGSLGASQKDNAR  250 (424)
T ss_pred             CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEECCCCCHHHCCCCCCCCHHHHH
T ss_conf             54699999999997634462535323279999999999999999817989898636622647213423789989879999


Q ss_pred             HHHHHHHHHCCCC
Q ss_conf             9999999828886
Q gi|254781065|r  292 KIVASLKEKISGL  304 (352)
Q Consensus       292 ~i~~~l~~~lsG~  304 (352)
T Consensus       251 ~~~~i~~~~~~~y  263 (424)
T PRK08629        251 QYRQILNSLFGQY  263 (424)
T ss_pred             HHHHHHHHHHCCC
T ss_conf             9999999972798