HHsearch alignment for GI: 254781065 and conserved domain: PRK09240
>PRK09240 thiH thiamine biosynthesis protein ThiH; Reviewed.
Probab=94.88 E-value=0.43 Score=28.82 Aligned_cols=199 Identities=20% Similarity=0.264 Sum_probs=128.3
Q ss_pred EECCCEEEE----EECCCCCCHHHCC-CCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE-ECCCCCCCCHHHHHH
Q ss_conf 520753799----9727430000011-2233012555567898999999999972997479997-269813249899999
Q gi|254781065|r 91 HRYPDRILL----KLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF-TGGDPLILSHKRLQK 164 (352)
Q Consensus 91 hkY~~rvLl----~~t~~C~~~CryC-fR~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVil-SGGDPl~l~~~~L~~ 164 (352)
T Consensus 66 ~~fG~~I~LfaPLYlSN~C~N~C~YCGf~~~N--~i~R~~Ls~eEI~~E~~ai~~~-G~k~ILLvtGE~~~~~~~~Yi~~ 142 (371)
T PRK09240 66 QRFGNTISLYTPLYLSNLCANDCTYCGFSMSN--KIKRKTLDEEEIEREMAAIKKL-GFEHILLVTGEHEAKVGVDYIRR 142 (371)
T ss_pred HHCCCEEEEEECHHHHCCCCCCCEECCCCCCC--CCCCCCCCHHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCHHHHHH
T ss_conf 87398589985044022217788758986778--7630028999999999999976-95238854057877698899999
Q ss_pred HHHHHHCCCCCEEEEEECCEEE-EEHHHCCHHHHHHHHHCCCCEEEEECCCCHHHC------------CHHHHHHHHHHH
Q ss_conf 9999861998128987434356-343433999999986259938999336995886------------999999999999
Q gi|254781065|r 165 VLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEF------------SEEAIAAISRLA 231 (352)
Q Consensus 165 ll~~L~~i~hv~~IRi~TR~pv-~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~El------------t~~~~~A~~~L~ 231 (352)
T Consensus 143 ~v~~ik~~--f------~~v~iev~P--l~~eeY~~L~~aG~d~~~vyQETY~~~~Y~~lHp~G~K~dy~~RL~a~eRa~ 212 (371)
T PRK09240 143 ALPLAREY--F------SSVAIEVQP--LSEEEYAELVELGLDGVTVYQETYNPATYAKHHLRGPKQDFFYRLETPERAA 212 (371)
T ss_pred HHHHHHHH--C------CCEEEEECC--CCHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHCCCCCCCCCHHHCCCHHHHH
T ss_conf 99999975--6------740799525--9989999999859986999603259999998588998545254523788898
Q ss_pred HCCCEEEECHHHHHCCCCCH-HHHHHHHHHH---HHCCCEEEEEECCC--CCCCC--CCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 87989823279862345788-9999999999---98698242301134--57652--10118699999999999982888
Q gi|254781065|r 232 NAGIILLSQSVLLKGINDDP-EILANLMRTF---VELRIKPYYLHHPD--LAAGT--SHFRLTIEEGQKIVASLKEKISG 303 (352)
Q Consensus 232 ~~Gv~v~nQsVLLkgVND~~-~~l~~L~~~L---~~~gV~PYYl~~~d--~v~G~--~hf~v~~~~~~~i~~~l~~~lsG 303 (352)
T Consensus 213 ~aGi~~vgiGaLl-GL~dwr~e~~~~~~Ha~~L~~~y~~~~~siS~PRlrP~~g~~~p~~~vsD~~l~q~i~a~Rl~~P~ 291 (371)
T PRK09240 213 RAGIRKIGLGALL-GLSDWRTDALMTALHLRYLQRKYWRARYSISFPRLRPCTGGFEPKSIVSDRQLVQLICAFRLFLPD 291 (371)
T ss_pred HCCCCEECEEEEE-CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 7599703611022-654689999999999999998779987576357533688998898657889999999999986655