HHsearch alignment for GI: 254781065 and conserved domain: PRK09613

>PRK09613 thiH thiamine biosynthesis protein ThiH; Reviewed.
Probab=95.58  E-value=0.27  Score=30.27  Aligned_cols=202  Identities=24%  Similarity=0.335  Sum_probs=129.4

Q ss_pred             ECCCEEEEEE----CCCCCCHHHCCC-CCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEE-EEEECCCCCCCCHHHHHHH
Q ss_conf             2075379997----274300000112-233012555567898999999999972997479-9972698132498999999
Q gi|254781065|r   92 RYPDRILLKL----LHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGGDPLILSHKRLQKV  165 (352)
Q Consensus        92 kY~~rvLl~~----t~~C~~~CryCf-R~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~e-VilSGGDPl~l~~~~L~~l  165 (352)
T Consensus        77 ~yGnrIvLFAPLYlSN~C~N~C~YCGF~~~-Nk~i~Rk~Lt~eEi~~E~~al~~~-G~krilLvtGE~p~~~~~~Yi~~~  154 (471)
T PRK09613         77 IYGNRIVLFAPLYISNYCVNNCVYCGFRRS-NKELKRKKLTQEEIREEVKALESM-GHKRLALVAGEHPVNCDIDYILES  154 (471)
T ss_pred             HCCCEEEEEECHHHHCCCCCCCEECCCCCC-CCCCCCCCCCHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCHHHHHHH
T ss_conf             618758998541120333678753787477-877763378999999999999976-973189871468887988999999


Q ss_pred             HHHHHCCC----CCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEE------------EECCCCHHHCCHHHHHHHHH
Q ss_conf             99986199----812898743435634343399999998625993899------------93369958869999999999
Q gi|254781065|r  166 LKTLRYIK----HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI------------AIHANHPYEFSEEAIAAISR  229 (352)
Q Consensus       166 l~~L~~i~----hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~i------------v~H~NHp~Elt~~~~~A~~~  229 (352)
T Consensus       155 i~~iy~~~~~~g~IrrvnVe-----i~Pl~--~eeY~~L~~aGigt~~vfQETYh~~tY~~~Hp~GpK~dy~~RL~a~dR  227 (471)
T PRK09613        155 IKTIYSTKNGNGEIRRVNVN-----IAPTT--VENYKKLKEAGIGTYQLFQETYHKPTYEKMHPAGPKSNYDWRLTAMDR  227 (471)
T ss_pred             HHHHHHHCCCCCCEEEEEEE-----ECCCC--HHHHHHHHHCCCCEEEEEEEECCHHHHHHHCCCCCCCCCHHHCCCHHH
T ss_conf             99998752467853368899-----44798--699999998699969998630788789985878986563334157888


Q ss_pred             HHHCCCEEEECHHHHHCCCCC-HHHHHHHHHHH---HHCCCEEEEEECCC--CCCCCC-----CCCCCHHHHHHHHHHHH
Q ss_conf             998798982327986234578-89999999999---98698242301134--576521-----01186999999999999
Q gi|254781065|r  230 LANAGIILLSQSVLLKGINDD-PEILANLMRTF---VELRIKPYYLHHPD--LAAGTS-----HFRLTIEEGQKIVASLK  298 (352)
Q Consensus       230 L~~~Gv~v~nQsVLLkgVND~-~~~l~~L~~~L---~~~gV~PYYl~~~d--~v~G~~-----hf~v~~~~~~~i~~~l~  298 (352)
T Consensus       228 A~~AGi~dVGiGaLl-GL~dwr~e~~~l~~Ha~~Le~~yg~g~hTIS~PRlrPa~g~~~~~~pp~~VsD~~f~qiiaa~R  306 (471)
T PRK09613        228 AMEAGIDDVGIGVLF-GLYDYRFEVLGLLMHAEHLEERFGVGPHTISVPRLEPALGSDLSENPPYLVSDEDFKKIVAILR  306 (471)
T ss_pred             HHHCCCCEECCHHEE-CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             987599713600202-6536899999999999999997599985663675436899976678998679899999999999


Q ss_pred             HHCCC
Q ss_conf             82888
Q gi|254781065|r  299 EKISG  303 (352)
Q Consensus       299 ~~lsG  303 (352)
T Consensus       307 L~vP~  311 (471)
T PRK09613        307 LAVPY  311 (471)
T ss_pred             HHCCC
T ss_conf             85654