HHsearch alignment for GI: 254781065 and conserved domain: PRK11194

Probab=98.96  E-value=1.3e-07  Score=74.93  Aligned_cols=226  Identities=19%  Similarity=0.217  Sum_probs=132.6

Q ss_pred             CCCCEEECCCEEEEEEC--CCCCCHHHCCCCCCEECCCCCCCCCHHHHHH---HHHHHHHC-----CCEEEEEEEC-CCC
Q ss_conf             88714520753799972--7430000011223301255556789899999---99999729-----9747999726-981
Q gi|254781065|r   86 LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEA---ALAYIQEK-----SQIWEVIFTG-GDP  154 (352)
Q Consensus        86 ~pgl~hkY~~rvLl~~t--~~C~~~CryCfR~~~~~~~~~~~~~~~~~~~---~~~Yi~~~-----~eI~eVilSG-GDP  154 (352)
T Consensus        92 IEtVlip~~~r~T~CvSSQVGC~m~C~FCaTG~~-Gl-~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~i~NiVfMGMGEP  169 (372)
T PRK11194         92 VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ-GF-NRNLRVSEIIGQVWRAAKIIGAAKVTGQRPITNVVMMGMGEP  169 (372)
T ss_pred             EEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCC-HH-HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCH
T ss_conf             7899987499768998643763689984458864-43-048788999999999999853201236665321678437842


Q ss_pred             CCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHH---CC--------HHH
Q ss_conf             3249899999999986199812898743435634343399999998625993899933699588---69--------999
Q gi|254781065|r  155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE---FS--------EEA  223 (352)
Q Consensus       155 l~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~E---lt--------~~~  223 (352)
T Consensus       170 L~----NydnV~~ai~il~~~~g~~~s~R~ITvST~Givp~I~~l~e~~~v~LAiSLHA~~de~R~~lmPin~~ypl~~L  245 (372)
T PRK11194        170 LL----NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDELRDEIVPINKKYNIETF  245 (372)
T ss_pred             HH----HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCHHCCCCHHHH
T ss_conf             55----39999999998648546677778589977787269999986315656987158986889877110315898999


Q ss_pred             HHHHHHHH-HCCC---EEEECHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             99999999-8798---9823279862345788999999999998698242301134576521011869999999999998
Q gi|254781065|r  224 IAAISRLA-NAGI---ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE  299 (352)
Q Consensus       224 ~~A~~~L~-~~Gv---~v~nQsVLLkgVND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf~v~~~~~~~i~~~l~~  299 (352)
T Consensus       246 ~~a~~~y~~~t~~~~~rvt~EYvLi~gvNDs~e~A~~L~~llk~~~~~V-NLIp~Np~~~~~~~~p~~~~i~~F~~~L~~  324 (372)
T PRK11194        246 LAAVRRYLEKSNANQGRVTVEYVMLDHVNDSTEHAHQLAELLKDTPCKI-NLIPWNPFPGAPYGRSSNSRIDRFSKVLME  324 (372)
T ss_pred             HHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCE-EEECCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             9999999997067885289999983687899999999999975998607-745689989988879999999999999997


Q ss_pred             HCCCCCCC---EEEEECCCCCCCE
Q ss_conf             28886541---0663178888823
Q gi|254781065|r  300 KISGLCQP---FYILDLPGGYGKV  320 (352)
Q Consensus       300 ~lsG~~~P---~~v~d~p~~~GKv  320 (352)
T Consensus       325 ~--gi~vtvR~s~G~DI~AACGQL  346 (372)
T PRK11194        325 Y--GFTVIVRKTRGDDIDAACGQL  346 (372)
T ss_pred             C--CCCEEEECCCCCCHHHHHHCC
T ss_conf             8--991797589985333540426