>TIGR01578 MiaB-like-B MiaB-like tRNA modifying enzyme, archaeal-type; InterPro: IPR006466 This clade of sequences is closely related to MiaB, a modifier of isopentenylated adenosine-37 of certain eukaryotic and bacterial tRNAs (see IPR006463 from INTERPRO). Sequence alignments suggest that this family of sequences perform the same chemical transformation as MiaB, perhaps on a different (or differently modified) tRNA base substrate. This clade represents a subfamily that spans the archaea and eukaryotes. The only archaeal miaB-like genes are in this group of sequences , , ..

Probab=96.05 E-value=0.041 Score=36.02 Aligned_cols=102 Identities=22% Similarity=0.323 Sum_probs=74.0 Q ss_pred EEEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC----HHHHHHHHH-HHHC Q ss_conf 79997274300000112233012555567898999999999972997479997269813249----899999999-9861 Q gi|254781065|r 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS----HKRLQKVLK-TLRY 171 (352) Q Consensus 97 vLl~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~----~~~L~~ll~-~L~~ 171 (352) T Consensus 146 ~i~pI~~GC~~~CsYCi~K~ARG~L-~S~PpEkiV~~ar~l~--~~G~kEI~iTs~DT~~YG~DiG~~kLPeLL~~~~t~ 222 (487) T TIGR01578 146 EILPINQGCLGNCSYCITKIARGKL-ASYPPEKIVEKARELV--AEGAKEIWITSQDTAAYGKDIGERKLPELLRRLITE 222 (487) T ss_pred CCCCCCCCCCCCCCEEEEEEEECCC-CCCCCHHHHHHHHHHH--HCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH T ss_conf 5554366635688754677764452-4887225689999999--705312651344666344223762127999999862 Q ss_pred CCCCEEEEEECCEEEEEHHH---CCHHHHHHHHHCCC Q ss_conf 99812898743435634343---39999999862599 Q gi|254781065|r 172 IKHVQILRFHSRVPIVDPQR---INPELIQCLKEAGK 205 (352) Q Consensus 172 i~hv~~IRi~TR~pv~~P~R---it~~L~~~l~~~~~ 205 (352) T Consensus 223 I~g~F~~RVGM----mnP~~~~~IldeL~~v~~~h~k 255 (487) T TIGR01578 223 IPGDFRLRVGM----MNPKNVLEILDELIEVFQSHDK 255 (487) T ss_pred CCCCCEEEEEC----CCCCCHHHHHHHHHHHHHCCCC T ss_conf 59932787625----8876334788999999854882

HHsearch alignment for GI: 254781065 and conserved domain: TIGR01578