HHsearch alignment for GI: 254781065 and conserved domain: TIGR02109
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E; InterPro: IPR011843 This entry describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.; GO: 0051539 4 iron 4 sulfur cluster binding, 0018189 pyrroloquinoline quinone biosynthetic process.
Probab=97.73 E-value=0.00047 Score=49.74 Aligned_cols=202 Identities=23% Similarity=0.359 Sum_probs=138.0
Q ss_pred EEEEECCCCCCHHHCCCC-CCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 799972743000001122-3301255556789899999999997299747999726981324989999999998619981
Q gi|254781065|r 97 ILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 (352)
Q Consensus 97 vLl~~t~~C~~~CryCfR-~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~hv 175 (352)
T Consensus 9 lLaELThRCPL~CPYCSNPLel~--R~~~EL~T~~W~~Vl~qAa~l-GvlqlHfSGGEP~aR~D--L~eLv~~A~~LG-- 81 (363)
T TIGR02109 9 LLAELTHRCPLQCPYCSNPLELA--RRKAELTTEEWTDVLTQAAEL-GVLQLHFSGGEPLARPD--LVELVAHARRLG-- 81 (363)
T ss_pred HHHHHHHCCCCCCCCCCCCHHHH--HHHCCCCHHHHHHHHHHHHHC-CCEEEECCCCCCCCCCC--HHHHHHHHHHCC--
T ss_conf 99998725888777989706888--511468888999999999853-90675130776663357--799999997758--
Q ss_pred EEEEEECCEEEEEHHHC------CHHHHHHHHHCCCCEEEEECCCCHHHCCHH-----------HHHHHHHHHHCCCEEE
Q ss_conf 28987434356343433------999999986259938999336995886999-----------9999999998798982
Q gi|254781065|r 176 QILRFHSRVPIVDPQRI------NPELIQCLKEAGKPVYIAIHANHPYEFSEE-----------AIAAISRLANAGIILL 238 (352)
Q Consensus 176 ~~IRi~TR~pv~~P~Ri------t~~L~~~l~~~~~~~~iv~H~NHp~Elt~~-----------~~~A~~~L~~~Gv~v~ 238 (352)
T Consensus 82 -----------lYtNLITSGvGLt~~rl~~L~~aGLD-HvQlSfQ~vd~~~a~~iaG~k~A~~~Kl~~A~~v~~~g~Plt 149 (363)
T TIGR02109 82 -----------LYTNLITSGVGLTEARLDALADAGLD-HVQLSFQGVDEALADRIAGLKNAFEQKLAVARAVKAAGLPLT 149 (363)
T ss_pred -----------CCHHHHHHHHHHHHHHHHHHHHCCCC-EEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf -----------70146776345679999999757985-788764147878886412502589999999999996189817
Q ss_pred ECHHHHHCCCCCHHHHHHHHHHHHHCCCE----EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC---EEEE
Q ss_conf 32798623457889999999999986982----4230113457652101186999999999999828886541---0663
Q gi|254781065|r 239 SQSVLLKGINDDPEILANLMRTFVELRIK----PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP---FYIL 311 (352)
Q Consensus 239 nQsVLLkgVND~~~~l~~L~~~L~~~gV~----PYYl~~~d~v~G~~hf~v~~~~~~~i~~~l~~~lsG~~~P---~~v~ 311 (352)
T Consensus 150 LN~V~HR~Ni~~i~~~i~La~~L~AdrvE~A~~QyYGWA~~NR~aLlPt~~Ql~~a~r~V~~aRer~~g~~~~~~l~yV- 228 (363)
T TIGR02109 150 LNFVLHRHNIDQIPEIIELAIELGADRVELATTQYYGWALLNRAALLPTREQLEEATRIVEEARERLKGQGNPLSLDYV- 228 (363)
T ss_pred EEHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE-
T ss_conf 6020024202136789999986389848887402022567745424898899999999999999998607998236763-
Q ss_pred ECCCCCCC
Q ss_conf 17888882
Q gi|254781065|r 312 DLPGGYGK 319 (352)
Q Consensus 312 d~p~~~GK 319 (352)
T Consensus 229 -~PDYY~~ 235 (363)
T TIGR02109 229 -VPDYYAE 235 (363)
T ss_pred -CCCCHHC
T ss_conf -4871210