HHsearch alignment for GI: 254781065 and conserved domain: TIGR03365
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=97.31 E-value=0.00076 Score=48.26 Aligned_cols=85 Identities=13% Similarity=0.207 Sum_probs=52.0
Q ss_pred CEEEEEECCCCCCHHHCCCCCCEE-CCC--CCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHC
Q ss_conf 537999727430000011223301-255--55678989999999999729974799972698132498999999999861
Q gi|254781065|r 95 DRILLKLLHVCPVYCRFCFRREMV-GSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 (352)
Q Consensus 95 ~rvLl~~t~~C~~~CryCfR~~~~-~~~--~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~ 171 (352)
T Consensus 22 ~p~vFvR~~GCnl~C~~CDT~y~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~V~iTGGEPllq~~--~~~L~~~l~~ 98 (238)
T TIGR03365 22 QKTMFVRTGGCDYRCSWCDSLFTWDGSAKDTWRPMTAEEVWQELKALG-GGTPLHVSLSGGNPALQKP--LGELIDLGKA 98 (238)
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCEEEECCCCHHHHCC--HHHHHHHHHH
T ss_conf 318999408989867658988761787887756378999999999834-8986189945998344418--9999999985
Q ss_pred CCCCEEEEEECCE
Q ss_conf 9981289874343
Q gi|254781065|r 172 IKHVQILRFHSRV 184 (352)
Q Consensus 172 i~hv~~IRi~TR~ 184 (352)
T Consensus 99 ~g~--~v~iETnG 109 (238)
T TIGR03365 99 KGY--RFALETQG 109 (238)
T ss_pred CCC--EEEEECCC
T ss_conf 798--49997899