HHsearch alignment for GI: 254781065 and conserved domain: pfam04055
>pfam04055 Radical_SAM Radical SAM superfamily. Radical SAM proteins catalyse diverse reactions, including unusual methylations, isomerisation, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation.
Probab=98.75 E-value=1.5e-07 Score=74.52 Aligned_cols=148 Identities=24% Similarity=0.333 Sum_probs=89.9
Q ss_pred EECCCCCCHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC--CEE
Q ss_conf 972743000001122330125555678989999999999729974799972698132498999999999861998--128
Q gi|254781065|r 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--VQI 177 (352)
Q Consensus 100 ~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~h--v~~ 177 (352)
T Consensus 2 ~~~~gC~~~C~fC~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~i~~~gg~p~~~~~--~~~~~~~~~~~~~~~~~~ 78 (165)
T pfam04055 2 IITPGCNLRCTYCAFPSIRARGKGRELSPEEILEEAKELARL-GVEVVILTGGEPLLLPD--LVELLERLLKLEELEGIR 78 (165)
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEECCCCCCCHH--HHHHHHHHHHHCCCCCEE
T ss_conf 889374877968999785788865226999999999888745-98599993167666527--777788876531467648
Q ss_pred EEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHHC----------CHHHHHHHHHHHHCCCEEEECHHHHHCC
Q ss_conf 987434356343433999999986259938999336995886----------9999999999998798982327986234
Q gi|254781065|r 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF----------SEEAIAAISRLANAGIILLSQSVLLKGI 247 (352)
Q Consensus 178 IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~El----------t~~~~~A~~~L~~~Gv~v~nQsVLLkgV 247 (352)
T Consensus 79 ~~~~t~-----~~~~~~~~~~~l~~~g~-~~i~~~ie~~~~~~~~~~~~~~~~~~~~~~i~~~~~~gi~~-~~~~i~~~~ 151 (165)
T pfam04055 79 ITLETN-----GTLLDEELLEELKEAGL-DRVSISLQSGDDEVLKIINRGHTFEEVLEALELLREAGIPV-VVDNIVGLP 151 (165)
T ss_pred EEEEEE-----CCCCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCE-EEEEEEECC
T ss_conf 999985-----14331045689997198-52224635599999998579999899999999999879978-899999799
Q ss_pred CCCHHHHHHH
Q ss_conf 5788999999
Q gi|254781065|r 248 NDDPEILANL 257 (352)
Q Consensus 248 ND~~~~l~~L 257 (352)
T Consensus 152 ~e~~~~~~~~ 161 (165)
T pfam04055 152 GENDEDLEET 161 (165)
T ss_pred CCCHHHHHHH
T ss_conf 9999999999