HHsearch results for GI: 254781065 and protein with PDBid: 2yx0_A
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=98.73 E-value=2.2e-07 Score=71.71 Aligned_cols=227 Identities=14% Similarity=0.158 Sum_probs=130.3
Q ss_pred EEEC-CCCCCHHHCCCCCC--EECCCCC-CCCC-HHHHHHHHH----HHHHC--------------CCEEEEEEEC-CCC
Q ss_conf 9972-74300000112233--0125555-6789-899999999----99729--------------9747999726-981
Q gi|254781065|r 99 LKLL-HVCPVYCRFCFRRE--MVGSQKG-TVLS-SKDTEAALA----YIQEK--------------SQIWEVIFTG-GDP 154 (352)
Q Consensus 99 l~~t-~~C~~~CryCfR~~--~~~~~~~-~~~~-~~~~~~~~~----Yi~~~--------------~eI~eVilSG-GDP 154 (352)
+.++ ..|+..|.||+|-+ ..+.... ..-. ..-++.+++ .|..- -.++.|.+|| |+|
T Consensus 74 ~tPsl~~CNlrCvfC~r~~~~~~~~~~~~~~d~pe~Ivee~i~~~~~~i~~~~g~~~~~~e~~~Ea~~~~hvais~~GEP 153 (342)
T 2yx0_A 74 MTPVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISLSGEP 153 (342)
T ss_dssp EESCSSCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECSSSCG
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 43041520258988899877777766544447989999999999999887642676302566665248767999578775
Q ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHH-----C--------CH
Q ss_conf 3249899999999986199812898743435634343399999998625993899933699588-----6--------99
Q gi|254781065|r 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE-----F--------SE 221 (352)
Q Consensus 155 l~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~E-----l--------t~ 221 (352)
++.++ |.++++.+.+-. + .+.+-|.. ++|.+ +..........-.+.+-++.+++ + -+
T Consensus 154 ll~p~--l~eli~~~~~~g-i-~~~l~TNG--tl~~~----~~~l~~~~~~~~~l~vSLDa~~~e~~~ki~r~~~~~~~e 223 (342)
T 2yx0_A 154 MLYPY--MGDLVEEFHKRG-F-TTFIVTNG--TIPER----LEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWE 223 (342)
T ss_dssp GGSTT--HHHHHHHHHHTT-C-EEEEEECS--CCHHH----HHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHH
T ss_pred CCCHH--HHHHHHHHHHCC-C-EEEEECCC--CCHHH----HHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCHHH
T ss_conf 34555--999999998639-6-49996588--66117----999998747886799835789989999873766767799
Q ss_pred HHHHHHHHHHHCCCEEEECHHHHHCCC-CCHHHHHHHHHHHHH--CCCEEEEEECCCCCCCCCCCCC-CHHHHHHHHHHH
Q ss_conf 999999999987989823279862345-788999999999998--6982423011345765210118-699999999999
Q gi|254781065|r 222 EAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRTFVE--LRIKPYYLHHPDLAAGTSHFRL-TIEEGQKIVASL 297 (352)
Q Consensus 222 ~~~~A~~~L~~~Gv~v~nQsVLLkgVN-D~~~~l~~L~~~L~~--~gV~PYYl~~~d~v~G~~hf~v-~~~~~~~i~~~l 297 (352)
.+.++++.|++.|+.+.-.++|++|+| |+.+.+++|.++.-- .-+++ |+|...-......-.+ .-++-.+..++|
T Consensus 224 rvl~~L~~L~~~g~~~vir~tlv~g~N~~ei~~~a~li~~~~pdfie~k~-y~~~G~s~~~L~~~~mP~~eEv~~fa~~l 302 (342)
T 2yx0_A 224 RILRFLELMRDLPTRTVVRLTLVKGENMHSPEKYAKLILKARPMFVEAKA-YMFVGYSRNRLTINNMPSHQDIREFAEAL 302 (342)
T ss_dssp HHHHHHHHHTTCSSEEEEEEEECTTTTCCCHHHHHHHHHHHCCSEEEEEE-CC------CCCCGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEE-EEEECCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999996699889999996898766699999999865999899960-38705786546401399889999999999
Q ss_pred HHHCCCCCCCEEEEECCCCCCCEEECCHHHEEECCCEEEEECCCCCEEE
Q ss_conf 9828886541066317888882355510212313987999816998871
Q gi|254781065|r 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 (352)
Q Consensus 298 ~~~lsG~~~P~~v~d~p~~~GKv~i~~~~~~~~~~~~~~l~~~~g~~~~ 346 (352)
-..++||.+-. +-+ .+-+.+ .++.+-.-..++.+|+.++
T Consensus 303 ~~~l~gy~i~~---e~~--~SrvvL-----L~~~~~~~k~~~~~g~~~~ 341 (342)
T 2yx0_A 303 VKHLPGYHIED---EYE--PSRVVL-----IMRDDVDPQGTGVEGRFIK 341 (342)
T ss_dssp HTTCTTEEEEE---EEG--GGTEEE-----EEETTSEEEEEGGGEEECC
T ss_pred HHHCCCCEEEC---CCC--CCEEEE-----EEECCCCCCCCEECCEEEC
T ss_conf 98635977640---568--743899-----9840326554420646735