HHSEARCH alignment of GI: 254781065 and SCOP domain: d1olta_

Alignment
>d1olta_ c.1.28.2 (A:) Oxygen-independent coproporphyrinogen III oxidase HemN {Escherichia coli [TaxId: 562]}
Probab=98.39  E-value=2.6e-05  Score=55.40  Aligned_cols=212  Identities=16%  Similarity=0.191  Sum_probs=138.6

Q ss_pred             EEEEEECCCCCCHHHCCCCCCEECCCCCCCCC-HHHHHHHHHHHHH---CCCEEEEEEECCCCCCCCHHHHHHHHHHHHC
Q ss_conf             37999727430000011223301255556789-8999999999972---9974799972698132498999999999861
Q gi|254781065|r   96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQE---KSQIWEVIFTGGDPLILSHKRLQKVLKTLRY  171 (352)
Q Consensus        96 rvLl~~t~~C~~~CryCfR~~~~~~~~~~~~~-~~~~~~~~~Yi~~---~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~  171 (352)
                      ..|.+=-..|...|.||--.-.+......... -+.+.+-++..+.   ...|..+-+-||.|-.|+.+.|..+++.+++
T Consensus        50 lsLYiHiPFC~~~C~yC~~~~~~~~~~~~~~~Y~~~L~~Ei~~~~~~~~~~~v~~i~~GGGTPt~L~~~~l~~ll~~l~~  129 (441)
T d1olta_          50 LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRE  129 (441)
T ss_dssp             EEEEEEECEESSCCTTCCSSCEECSCTHHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEESCGGGSCHHHHHHHHHHHHH
T ss_pred             EEEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH
T ss_conf             28999728978889989583654888550999999999999996676179850303861888477899999999998765


Q ss_pred             CCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCC-CEEEEECCCCHHHC--------CHHHHHHHHHHHHCCCEEEECHH
Q ss_conf             9981289874343563434339999999862599-38999336995886--------99999999999987989823279
Q gi|254781065|r  172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEF--------SEEAIAAISRLANAGIILLSQSV  242 (352)
Q Consensus       172 i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~-~~~iv~H~NHp~El--------t~~~~~A~~~L~~~Gv~v~nQsV  242 (352)
                      .-.+.  ....-..-..|..+|++.++.|++.|. .+.+-++-=.+..+        ...+.+|++.++++|+.-.|=- 
T Consensus       130 ~~~~~--~~~e~t~E~~P~~~~~~~l~~l~~~G~nRiSlGvQs~~~~vl~~i~R~~~~~~~~~~~~~~r~~g~~~vn~D-  206 (441)
T d1olta_         130 NFQFN--ADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNID-  206 (441)
T ss_dssp             HSCEE--EEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEE-
T ss_pred             HCCCC--CHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECC-
T ss_conf             22345--000022102345420578999997198559951200130455443057878999999998774144236235-


Q ss_pred             HHHCC-CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC--------CCHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf             86234-5788999999999998698242301134576521011--------86999999999999828886541066
Q gi|254781065|r  243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR--------LTIEEGQKIVASLKEKISGLCQPFYI  310 (352)
Q Consensus       243 LLkgV-ND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf~--------v~~~~~~~i~~~l~~~lsG~~~P~~v  310 (352)
                      |+=|. +.+.+.|.+-.+.+.++++.=-.+|.....+++....        .+.++..++++.....+....--.|.
T Consensus       207 LI~GlPgqT~~~~~~tl~~~~~l~pd~is~y~~~~~p~~~~~q~~~~~~~lp~~~~~~~~~~~~~~~L~~~GY~~~~  283 (441)
T d1olta_         207 LIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIG  283 (441)
T ss_dssp             EEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf             44323776037788999899850887422322112461267663022320024578889999999999873831014


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Radical SAM enzymes
family: Oxygen-independent coproporphyrinogen III oxidase HemN
domain: Oxygen-independent coproporphyrinogen III oxidase HemN
species: Escherichia coli [TaxId: 562]