HHSEARCH alignment of GI: 254781065 and SCOP domain: d1r30a_

Alignment
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]}
Probab=98.54  E-value=1.5e-05  Score=57.02  Aligned_cols=197  Identities=14%  Similarity=0.159  Sum_probs=128.0

Q ss_pred             EEEECCCCCCHHHCCC-CCC-EECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECC-CCCC-CCHHHHHHHHHHHHCCC
Q ss_conf             9997274300000112-233-012555567898999999999972997479997269-8132-49899999999986199
Q gi|254781065|r   98 LLKLLHVCPVYCRFCF-RRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG-DPLI-LSHKRLQKVLKTLRYIK  173 (352)
Q Consensus        98 Ll~~t~~C~~~CryCf-R~~-~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGG-DPl~-l~~~~L~~ll~~L~~i~  173 (352)
                      +...|+.|...|.||. ++. ..........+.+++.+.+.++.+. .++++.+.|| +|.. ..-..+.+++..+....
T Consensus        43 ~~~~TngC~~~C~fC~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~-G~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~  121 (312)
T d1r30a_          43 LSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAA-GSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMG  121 (312)
T ss_dssp             EEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHHT-TCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTT
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf             4751899888698399876689887642124557899999999974-998999705777874066899999998521136


Q ss_pred             CCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHHC---------CHHHHHHHHHHHHCCCEEEECHHHH
Q ss_conf             8128987434356343433999999986259938999336995886---------9999999999998798982327986
Q gi|254781065|r  174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGIILLSQSVLL  244 (352)
Q Consensus       174 hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~El---------t~~~~~A~~~L~~~Gv~v~nQsVLL  244 (352)
                      -    .+++     -....+++.++.|++.+.. .+..-+...+|+         ..+..++++.++++|+.+..  =++
T Consensus       122 ~----~~~~-----~~~~l~~e~l~~lk~aG~~-~i~~~iEs~~~~~~~~~~~~~~~~~~~~~~~a~~~Gi~~~~--~~i  189 (312)
T d1r30a_         122 L----EACM-----TLGTLSESQAQRLANAGLD-YYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCS--GGI  189 (312)
T ss_dssp             S----EEEE-----ECSSCCHHHHHHHHHHCCC-EEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEEC--CEE
T ss_pred             C----EEEE-----CCCCCHHHHHHHHHCCCCE-EEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEC--CEE
T ss_conf             3----2320-----1111039998886534600-67421121455533478999999999999999983466300--257


Q ss_pred             HCCCCCHHHHHHHHHHHHHCCCEEEEE--ECCCCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             234578899999999999869824230--113457652---101186999999999999828886541
Q gi|254781065|r  245 KGINDDPEILANLMRTFVELRIKPYYL--HHPDLAAGT---SHFRLTIEEGQKIVASLKEKISGLCQP  307 (352)
Q Consensus       245 kgVND~~~~l~~L~~~L~~~gV~PYYl--~~~d~v~G~---~hf~v~~~~~~~i~~~l~~~lsG~~~P  307 (352)
                      =|.-++.+.+.+....|.++++.|.++  +..-|.+|+   .+-.++..+-++++.-.|=.++...++
T Consensus       190 ~G~~et~~d~~~~l~~l~~l~~~~~~i~~~~~~p~~gT~l~~~~~~~~~e~l~~iA~~Rl~lp~~~i~  257 (312)
T d1r30a_         190 VGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVR  257 (312)
T ss_dssp             ECSSCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTSEEE
T ss_pred             ECCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf             55768679999999999855778876430541689984324456898899999999999868876258


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Radical SAM enzymes
family: Biotin synthase
domain: Biotin synthase
species: Escherichia coli [TaxId: 562]