BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase
protein [Candidatus Liberibacter asiaticus str. psy62]
(352 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|158319469|ref|YP_001511976.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii
OhILAs]
gi|158139668|gb|ABW17980.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii
OhILAs]
Length = 416
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 121/349 (34%), Positives = 211/349 (60%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ +T+ +DL + E+ IKE + +TP A+L++ +PN P+ +Q +
Sbjct: 24 QVKNR-ITNVEDLKKVINLTDEEEKGIKECLKTLRMGITPYYASLMDKDDPNCPVRKQAV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL+ + +DP+ ++ SP+ G+ HRYP+R+LL + +C +YCR C RR G Q
Sbjct: 83 PIMTELHKSDADMDDPLHEDADSPVPGLTHRYPNRVLLLITDMCSMYCRHCTRRRFAG-Q 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T + +AA+ YI+ ++ +V+ +GGD L++S ++L+ ++ LR I+HV+I+R
Sbjct: 142 NDTAMPMDRIDAAIEYIRRTPEVRDVLLSGGDCLLVSDEKLEYIISKLREIEHVEIIRLG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL+ LK+ P+++ H NHP E +EE A++ LA+AGI L +QS
Sbjct: 202 SRTPVVMPQRITPELVGMLKKY-HPIWLNTHFNHPKELTEETKRALTLLADAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND I+ +L+ V+ R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 VLLRGVNDCVHIMRDLVHGLVKNRVRPYYIYQCDLSMGIEHFRTPVSKGIEIIEGLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 321 SGYAVPTFVVDAPGGGGKIPVMPNYVVSQSHNKVILRNYEGVITTYTEP 369
>gi|75423266|sp|Q9XBQ8|KAMA_CLOSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName:
Full=KAM
gi|5410603|gb|AAD43134.1|AF159146_1 L-lysine 2,3-aminomutase [Clostridium subterminale]
Length = 416
Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 209/349 (59%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + + ++L + KE+ + + + +A+TP +LI+P++PNDP+ +Q I
Sbjct: 23 QVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQAI 81
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ELN + EDP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 82 PTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQS 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + + A+ YI+ Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R
Sbjct: 142 DDS-MPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRIG 200
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AG+ L +QS
Sbjct: 201 SRTPVVLPQRITPELVNMLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQS 259
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 260 VLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGHT 319
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG C P +++D PGG GK + + + + + + ++ Y
Sbjct: 320 SGYCVPTFVVDAPGGGGKTPVMPNYVISQSHDKVILRNFEGVITTYSEP 368
>gi|167752794|ref|ZP_02424921.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216]
gi|167659863|gb|EDS03993.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216]
Length = 413
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 207/350 (59%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + +L + E+ + I+E +A+TP LI+P NP+ PI +Q I
Sbjct: 22 QVKNR-IETVDELKKYIKLTAEEEEGIRESLKTLRMAITPYYLTLIDPENPHCPIRKQAI 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL P + EDP+ +++ SP+ G+ HRYPDR+L + +C +YCR C RR G Q
Sbjct: 81 PTVEELKRSPADLEDPLHEDSDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-Q 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K + + YI Q+ +V+ +GGD L++S ++L+ ++ LR I HV+I+R
Sbjct: 140 HDCATPEKQIDDCIDYIARTPQVRDVLLSGGDALLVSDEKLEYIISRLRAIPHVEIIRIG 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL+ LK+ P+++ H NHP E + E+ A +RLA+AGI L +QS
Sbjct: 200 SRTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPNEVTPESKQACARLADAGIPLGNQS 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND I+ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+
Sbjct: 259 VLLRGVNDCTHIMKKLVHELVKMRVRPYYIYICDLSLGIGHFRTPVSKGIEIIENLRGHT 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P +++D PGG GK+ + + + + ++ ++ Y +
Sbjct: 319 SGYAVPTFVVDAPGGGGKIPVMPNYVISQAPNRVVLRNYEGVITTYTEPT 368
>gi|310658686|ref|YP_003936407.1| l-lysine 2,3-aminomutase [Clostridium sticklandii DSM 519]
gi|308825464|emb|CBH21502.1| l-lysine 2,3-aminomutase [Clostridium sticklandii]
Length = 414
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 126/350 (36%), Positives = 211/350 (60%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + + ++L + E+ + +K + +A+TP +LI+ NPNDP+ +Q +
Sbjct: 22 QVRNR-IETVEELKKYIPLTPEEEEGVKRCLDTLRMAITPYYLSLIDVENPNDPVRKQAV 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL+ ++EDP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Q
Sbjct: 81 PLSLELHRAASDQEDPLHEDGDSPVPGLTHRYPDRVLLLMTDQCSMYCRHCTRRRFAG-Q 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +K +AA+ YI+ Q+ +V+ +GGD L++S ++L+ +K LR I HV+++R
Sbjct: 140 TDSAVDTKQIDAAIEYIKNTPQVRDVLLSGGDALLISDEKLEYTIKRLREIPHVEVIRIG 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AGI L +QS
Sbjct: 200 SRVPVVMPQRITPELVSMLKKY-HPVWLNTHFNHPNEITEESKRACELLADAGIPLGNQS 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 259 VLLAGVNDCMHVMKKLVNDLVKIRVRPYYIYQCDLSVGIEHFRTPVAKGIEIIEGLRGHT 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG C P +++D PGG GK + + + + + + ++ Y
Sbjct: 319 SGYCVPTFVVDAPGGGGKTPVMPNYVISQNHNKVILRNFEGVITTYDEPD 368
>gi|257470355|ref|ZP_05634446.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
gi|317064564|ref|ZP_07929049.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
gi|313690240|gb|EFS27075.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
Length = 415
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 118/349 (33%), Positives = 203/349 (58%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + S +DL + E+ + +K+ +A+TP +L++ ++PN P+ +Q I
Sbjct: 25 QVKNR-IESLEDLKKYITLSAEEEEGVKKTLETLRMAVTPYYFSLMDNNDPNCPVRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G+
Sbjct: 84 PSIKEIHQAEADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGAS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI + Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R
Sbjct: 144 DDA-MPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL++ LK+ P+++ H NHP E + E+ A LANAGI L +QS
Sbjct: 203 SRTPVVLPQRITPELVEMLKKY-HPIWLNTHFNHPKEVTPESKKACELLANAGIPLGNQS 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGINDCVHVMKKLVHELVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK + + + + ++ Y
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQAPHKVVLRNFEGVITTYTEP 370
>gi|228469409|ref|ZP_04054423.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3]
gi|228309093|gb|EEK17723.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3]
Length = 421
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 128/350 (36%), Positives = 214/350 (61%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + + L + E+ + ++E +A+TP +LI+P++PNDP+ +Q I
Sbjct: 24 QVRNR-IETLDQLKKYIKLTPEEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQSI 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL++ PE++ DP+ ++ SP+ G+ HRYPDR+L + +C +YCR C RR G Q
Sbjct: 83 PTINELHVSPEDQLDPLSEDEDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-Q 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K + E + YI++ ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R
Sbjct: 142 KDAASPKERIEKCIEYIEQTPEVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL+Q L + P+++ H NHP E + E+ A R+ANAGI L +QS
Sbjct: 202 SRTPVVCPQRITPELVQMLSKY-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND P I+ +L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+
Sbjct: 261 VLLRGINDCPSIMKHLVHELVKMRVRPYYIYVCDLSRGISHFRTPVSKGIEIIEALRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P +++D PGG GK + + + + ++ ++ Y S
Sbjct: 321 SGYAVPTFVVDAPGGGGKTPVMPNYVISQSPHRVVLRNYEGVITTYTEPS 370
>gi|331004173|ref|ZP_08327653.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411583|gb|EGG90993.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 418
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 122/349 (34%), Positives = 212/349 (60%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLR++ +T+ + L + +++ + +K + +A+TP +LI+ + +DP+ +Q I
Sbjct: 24 QLRNR-ITNVESLKKYIKLTEKEEEGVKRCLENLRMAITPYYLSLIDLEDEDDPVRKQAI 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL+I + DP+ ++ SP+ G+ HRYPDR+L + C +YCR C RR G Q
Sbjct: 83 PTVSELHIADADLADPLHEDTDSPVHGLTHRYPDRVLFLVTDQCSMYCRHCTRRRFAG-Q 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T + + +A + YI+ ++ +V+ +GGD L++S+++L+ ++ LR I+HV+I+R
Sbjct: 142 NDTSVPTSQVDACIDYIRRHPEVRDVLLSGGDALLISNEKLEYIISELRKIEHVEIVRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL+ LK+ PV++ H NHP E ++E+ A +RLA+AGI L +Q+
Sbjct: 202 SRTPVVMPQRITPELVNMLKKY-HPVWLNTHFNHPSEITKESAEACARLADAGIPLGNQT 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+ND I+ +L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 VLLAGVNDCVHIMTDLVHELVKIRVRPYYIYQCDLSQGLEHFRTPVSKGIEIIEGLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG C P +++D PGG GK + + + G + ++ ++ Y
Sbjct: 321 SGYCVPTFVVDAPGGGGKTPVMPNYVISQSPGKVILRNYEGVITTYTEP 369
>gi|225734347|pdb|2A5H|A Chain A, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate).
gi|225734348|pdb|2A5H|B Chain B, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate).
gi|225734349|pdb|2A5H|C Chain C, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate).
gi|225734350|pdb|2A5H|D Chain D, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate)
Length = 416
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 204/349 (58%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + + ++L + KE+ + + + A+TP +LI+P++PNDP+ +Q I
Sbjct: 23 QVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRXAITPYYLSLIDPNDPNDPVRKQAI 81
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ELN + EDP+ ++ SP+ G+ HRYPDR+LL + C YCR C RR G
Sbjct: 82 PTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDXCSXYCRHCTRRRFAGQS 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + A+ YI+ Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R
Sbjct: 142 DDSXP-XERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRIG 200
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AG+ L +QS
Sbjct: 201 SRTPVVLPQRITPELVNXLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQS 259
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 260 VLLRGVNDCVHVXKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGHT 319
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG C P +++D PGG GK + + + + + + ++ Y
Sbjct: 320 SGYCVPTFVVDAPGGGGKTPVXPNYVISQSHDKVILRNFEGVITTYSEP 368
>gi|257463416|ref|ZP_05627811.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
gi|317060981|ref|ZP_07925466.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
gi|313686657|gb|EFS23492.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
Length = 419
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 115/350 (32%), Positives = 199/350 (56%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + + +DL + +E+ + + + +A+TP +LI+ +PN P+ +Q I
Sbjct: 25 QVRNR-IETLEDLKQFANLSEEESEGVVKTLETLRMAITPYYFSLIDLEDPNCPVRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 84 PTVQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + + + YI + ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R
Sbjct: 144 DDS-MPMERIDKCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +QS
Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKRACEMLADAGVPLGNQS 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND ++ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P +++D PGG GK + + + + ++ Y
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHKVILRNFEGVITTYTEPD 371
>gi|257451624|ref|ZP_05616923.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
gi|257466940|ref|ZP_05631251.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
gi|315918082|ref|ZP_07914322.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
gi|317058188|ref|ZP_07922673.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
gi|313683864|gb|EFS20699.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
gi|313691957|gb|EFS28792.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
Length = 419
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 116/350 (33%), Positives = 197/350 (56%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + + DL + E+ + + + +A+TP +LI+ +PN P+ +Q I
Sbjct: 25 QVRNR-IETLDDLKQFANLSDEESEGVVKTLETLRMAITPYYFSLIDLDDPNCPVRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 84 PTIQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + + + YI + ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R
Sbjct: 144 DDS-MPMERIDRCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LANAG+ L +QS
Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKKACEMLANAGVPLGNQS 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND ++ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P +++D PGG GK + + + + ++ Y
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHKVILRNFEGVITTYTEPD 371
>gi|20807210|ref|NP_622381.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
gi|254478895|ref|ZP_05092258.1| KamA family protein [Carboxydibrachium pacificum DSM 12653]
gi|20515713|gb|AAM23985.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
gi|214035161|gb|EEB75872.1| KamA family protein [Carboxydibrachium pacificum DSM 12653]
Length = 417
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 210/349 (60%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ + + ++L + +E+ + I + +A+TP +LI+P++PNDPI ++ +
Sbjct: 24 QIANR-IETVEELKKYLPLSEEEEEAISKALQKLRMAITPYYLSLIDPNDPNDPIRKRAV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL PE+ DP+ ++ SP+ G+ HRYPDR+L+ + C +YCR C RR G +
Sbjct: 83 PTIHELYQAPEDLVDPLYEDVDSPVPGLTHRYPDRVLMLVTDQCSMYCRHCTRRRFAG-E 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ E + YI+ QI +V+ +GGDPL LS RL++++K LR I HV+I+R
Sbjct: 142 TDAPMPMDKIEKQIEYIRNTPQIRDVLISGGDPLTLSDSRLEEIIKRLREIPHVEIIRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
S VP+V P RI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q+
Sbjct: 202 SSVPVVLPMRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSKRACEMLADAGIPLGNQT 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ L+
Sbjct: 261 VLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSFGLSHFRTPVSKGIEIIEGLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG C P +++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 321 SGYCVPTFVVDAPGGGGKIPVGPNYVISQSHDKIVLRNYEGVIVTYVEP 369
>gi|229496618|ref|ZP_04390332.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406]
gi|229316515|gb|EEN82434.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406]
Length = 418
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 211/350 (60%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + DL + E+ + ++E +A+TP +LI+P++PNDP+ +Q +
Sbjct: 24 QVKNR-IETLDDLKKYVTLTPEEEEGVRESLKSLRMAITPYYLSLIDPNDPNDPVRKQSV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL I E++ DP+ ++ SP G+ HRYPDR+L + +C +YCR C RR G Q
Sbjct: 83 PTANELIISEEDQLDPLSEDEDSPTPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-Q 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K + + A+ YI+ ++ +V+ +GGD L++S ++ +L+ LR I HV+I+RF
Sbjct: 142 KDAASPRERIDKAIEYIERTPEVRDVLLSGGDALMVSDSMIEYILQRLRAIDHVEIIRFG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL++ LK+ P+++ H NHP E + E+ A RLANAG+ L +Q+
Sbjct: 202 SRTPVVLPQRITPELVEILKKY-HPIWLNTHFNHPNEITAESKEACERLANAGVPLGNQT 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+
Sbjct: 261 VLLRGINDCTYVMKKLVHELVKIRVRPYYIYVCDLSRGIGHFRTPVSKGIEIIENLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P +++D PGG GK+ + + I + ++ ++ Y +
Sbjct: 321 SGYAVPTFVVDAPGGGGKIPVMPNYIVSQAPNRVVLRNYEGVLTTYTEPA 370
>gi|188586500|ref|YP_001918045.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351187|gb|ACB85457.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 420
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 125/349 (35%), Positives = 205/349 (58%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL ++ +T + L + +E+ + IK+ +A+TP A+L++ +P+ PI R +
Sbjct: 26 QLNNR-ITDVESLKEIINLTEEEEEGIKQTLKTIRMAITPYYASLMDKDDPSCPIRRHAV 84
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ELN + EDP+ +++ SP++GI HRYPDR+L + C +YCR C RR + GS
Sbjct: 85 PSSLELNFSEFDLEDPLSEDSDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRLAGS- 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI+ Q+ +V+ +GGD L++S +RL+ +L L I+HV+I+R
Sbjct: 144 TDKAAPIEVIDKAIDYIKNTPQVRDVLISGGDGLLISDERLEYILNELYKIEHVEIVRIG 203
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI LI LK+ P+++ H NHP E + EA A+++LA+AGI L +QS
Sbjct: 204 TRAPVVLPQRITDNLISILKKY-HPIWLNTHFNHPKEITSEAKEALAKLADAGIPLGNQS 262
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND P + L+ V+ R++PYY++ DL+ G HFR ++ G +I+ SL+
Sbjct: 263 VLLRGINDCPVTMKELVHELVKNRVRPYYIYQCDLSQGIEHFRTSVSAGLEIIESLRGHT 322
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK + + S + ++ ++ Y
Sbjct: 323 SGYAVPTFVVDAPGGGGKTPVMPQYLISQSPDSVVLRNYEGVISKYSEP 371
>gi|313886286|ref|ZP_07820012.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I]
gi|332299776|ref|YP_004441697.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707]
gi|312924231|gb|EFR35014.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I]
gi|332176839|gb|AEE12529.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707]
Length = 421
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 127/349 (36%), Positives = 213/349 (61%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + + L + E+ + ++E +A+TP +LI+P++PNDP+ +Q I
Sbjct: 24 QVRNR-IETLDQLKKYIKLTPEEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQSI 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL++ PE++ DP+ ++ SP+ G+ HRYPDR+L + +C +YCR C RR G Q
Sbjct: 83 PTINELHVSPEDQLDPLSEDEDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-Q 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K + E + YI++ ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R
Sbjct: 142 KDAASPKERIEKCIEYIEQTPEVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL+Q L + P+++ H NHP E + E+ A R+ANAGI L +QS
Sbjct: 202 SRTPVVCPQRITPELVQMLSKY-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND P I+ +L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+
Sbjct: 261 VLLRGINDCPSIMMHLVHELVKMRVRPYYIYVCDLSQGISHFRTPVSKGIEIIEALRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ + + + ++ ++ Y
Sbjct: 321 SGYAVPTFVVDAPGGGGKIPVMPTYVISQSPHRVVLRNYEGVITTYTEP 369
>gi|326391509|ref|ZP_08213042.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
ethanolicus JW 200]
gi|325992438|gb|EGD50897.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
ethanolicus JW 200]
Length = 423
Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 213/351 (60%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + + ++L + +E+ + I + +A+TP +LI+P++PNDPI ++ +
Sbjct: 30 QIRNR-IETVEELKKYLPLTQEEEEAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRAV 88
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL E+ DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Q
Sbjct: 89 PTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG-Q 147
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L E A+ YI + QI +V+ +GGDPL LS RL++++K LR I HV+I+R
Sbjct: 148 TDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRIG 207
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
S P+V PQRI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q+
Sbjct: 208 SSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQT 266
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+
Sbjct: 267 VLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGHT 326
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG C P +++D PGG GK+ + + + + + ++ ++ Y +
Sbjct: 327 SGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTYIEPQN 377
>gi|34540806|ref|NP_905285.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83]
gi|188995030|ref|YP_001929282.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277]
gi|34397120|gb|AAQ66184.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83]
gi|188594710|dbj|BAG33685.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277]
Length = 416
Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 208/351 (59%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ + + L + E+ + +KE +A+TP +LI+P NPN PI +Q I
Sbjct: 24 QVLNR-IETLDQLKKYVTLTAEEEEGVKESLKVLRMAITPYYLSLIDPENPNCPIRKQAI 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL PE++ DP+ ++ SP+ G+ HRYPDR+L + C +YCR C RR G +
Sbjct: 83 PTHQELVRAPEDQVDPLSEDEDSPVPGLTHRYPDRVLFLITDKCSMYCRHCTRRRFAGQK 142
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + + + YI + +V+ +GGD L++S +RL+ +LK LR I HV+I+R
Sbjct: 143 DASSPS-ERIDRCIDYIANTPTVRDVLLSGGDALLVSDERLEYILKRLREIPHVEIVRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI P+L+ LK+ PV++ H NHP E +EEA+ A R+ANAGI L +Q+
Sbjct: 202 SRTPVVLPQRITPQLVDMLKKY-HPVWLNTHFNHPNEVTEEAVEACERMANAGIPLGNQT 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+
Sbjct: 261 VLLRGINDCTHVMKRLVHLLVKMRVRPYYIYVCDLSLGIGHFRTPVSKGIEIIENLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + ++ ++ Y +
Sbjct: 321 SGYAVPTFVVDAPGGGGKIPVMPNYVVSQSPRHVVLRNYEGVITTYTEPEN 371
>gi|226315087|ref|YP_002774983.1| lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599]
gi|226098037|dbj|BAH46479.1| probable lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599]
Length = 454
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 117/349 (33%), Positives = 202/349 (57%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + DL + E+ + ++ + + +TP A+L++P +P+DP+ Q +
Sbjct: 31 QLTH-TIKTVDDLKQVINLTPEEEEGVRISTQTIPLNITPYYAHLMDPDDPSDPVRMQSV 89
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 90 PLSSEMVRTKYDMEDPLHEDTDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 148
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +A + YI+ + ++ +V+ +GGD L+++ + L+ ++ +LR I HV+I+R
Sbjct: 149 IGMGVPKKQLDACIDYIRSRPEVRDVLLSGGDGLLINDRVLEYIISSLRDIPHVEIIRIG 208
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L LK+ PV++ H NHP E + EA A LANAG+ L +Q+
Sbjct: 209 TRAPVVFPQRITENLCNILKKY-HPVWLNTHFNHPKEITPEAKLACEMLANAGVPLGNQA 267
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND + L++ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 VILAGINDCANTMKKLVQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGIEIIEHLRGHT 327
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D P G GK+ + + I + + + ++ YP
Sbjct: 328 SGYAVPTFVVDAPHGGGKIPVSPNYIISQASDKVVLRNFEGVITSYPEP 376
>gi|239617353|ref|YP_002940675.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
gi|239506184|gb|ACR79671.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
Length = 426
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 132/349 (37%), Positives = 211/349 (60%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ +T+ + L I KE+ + IK +A+TP A L++P NP PI RQ +
Sbjct: 24 QVRNR-ITTVEQLKQVINITKEEEEGIKNCLKTLRMAITPYYATLMDPDNPKCPIRRQAV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ++EL + + DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Q
Sbjct: 83 PTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG-Q 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ ++ + A+ YI+E Q+ +V+ +GGD L++ L+ +LK LR I HV+I+R
Sbjct: 142 LDKPRTKREIDKAIEYIRETPQVRDVLLSGGDALLVDDSVLEYILKELRKIPHVEIIRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL++ LK+ P+++ H NHP E + E+ A LANAGI L +QS
Sbjct: 202 SRTPVVLPQRITPELVKMLKKY-HPIWLNTHFNHPKEITPESAKACETLANAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND P I+ L+ V++R++PYY++ DL+ G HFR +I +G I+ SL
Sbjct: 261 VLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIAIMESLIGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG C P +++D PGG GK+++ + + + + ++ ++ Y
Sbjct: 321 SGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYEGVITTYHEP 369
>gi|307265361|ref|ZP_07546918.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
wiegelii Rt8.B1]
gi|306919645|gb|EFN49862.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 423
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 212/351 (60%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + + ++L + +E+ I + +A+TP +LI+P++PNDPI ++ +
Sbjct: 30 QIRNR-IETVEELKKYLPLTQEEEQAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRAV 88
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL E+ DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Q
Sbjct: 89 PTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFSG-Q 147
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L E A+ YI + QI +V+ +GGDPL LS RL++++K LR I HV+I+R
Sbjct: 148 TDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRIG 207
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
S P+V PQRI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q+
Sbjct: 208 SSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQT 266
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+
Sbjct: 267 VLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGHT 326
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG C P +++D PGG GK+ + + + + + ++ ++ Y +
Sbjct: 327 SGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTYIEPQN 377
>gi|73668214|ref|YP_304229.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro]
gi|72395376|gb|AAZ69649.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro]
Length = 414
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 126/353 (35%), Positives = 206/353 (58%), Gaps = 5/353 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q RH+ + + ++L + + + ++IK+ + +A++P A+LI+P +PN PI Q +
Sbjct: 17 QYRHR-IETVEELEKLIKLSEPEKEDIKKALEVFPMAISPYYASLIDPKDPNCPIRMQAV 75
Query: 62 PQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P EL E EDP+ ++ SP + I HRYPDR+L + + C +YCR C R+ VG
Sbjct: 76 PSSAELKKSSWELEDPLCEDRDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRVG 135
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + S K + YI+E S+I +V+ +GGD L++S +RL +L L I HV+I+R
Sbjct: 136 N-REYDYSEKAIREGIEYIREHSEIRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIVR 194
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
SRVP+ PQRI PEL + L++ V++ H NHP E + EA A+ LA AG+ L +
Sbjct: 195 LGSRVPVTLPQRITPELCEILEKYPS-VWLNTHFNHPKEITPEAKKAMRMLAKAGVPLGN 253
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND P I+ L ++++ +PYYL+ DL+ G HFR + G +I+ L+
Sbjct: 254 QSVLLRGVNDCPMIIKKLCHELLKIKTRPYYLYQCDLSFGLEHFRTPVSRGIEIIEMLRG 313
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SGL P +++D PGG GK+ + + + + + ++ ++ YP +
Sbjct: 314 HTSGLAVPTFVIDAPGGGGKIPVGPNYLISSSDTGVVLRNYEGVICMYPEPEA 366
>gi|188587476|ref|YP_001919021.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179352163|gb|ACB86433.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 416
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 207/349 (59%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ +T + L + ++ + I++ +A+TP A+L++ +P+ PI RQ +
Sbjct: 22 QLKNR-ITDLESLKEIINLTDKEEEGIQQALKTLRMAITPYYASLMDKDDPSCPIRRQAV 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ELN + EDP+ ++ SP++GI HRYPDR+L + C +YCR C RR + G+
Sbjct: 81 PSSLELNFGDSDLEDPLSEDTDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRIAGT- 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI+ ++ +V+ +GGD LI+S +RL+ +L L I+HV+I+R
Sbjct: 140 TDKAAPKEVVDNAIEYIKNTPRVRDVLISGGDGLIISDERLEYILDQLYKIEHVEIIRIG 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI +L+ LK+ PV++ H NHP E + EA A+++LA+AGI L +QS
Sbjct: 200 TRAPVVLPQRITDDLVSILKKY-HPVWLNTHYNHPKELTSEAQKALAKLADAGIPLGNQS 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND P + NL+ V+ R++PYY++ DL+ G HFR ++ G +IV L+
Sbjct: 259 VLLKGINDCPGTMKNLVHELVKHRVRPYYIYQCDLSQGIEHFRTSVSAGLEIVEHLRGHT 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ + + S + ++ ++ Y
Sbjct: 319 SGFAVPTYVVDAPGGGGKIPVMPQYLISQSPESVILRNYEGVIAKYSEP 367
>gi|237743425|ref|ZP_04573906.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1]
gi|260494967|ref|ZP_05815096.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33]
gi|229433204|gb|EEO43416.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1]
gi|260197410|gb|EEW94928.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33]
Length = 425
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 199/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + DL + E+ + +KE +A+TP +LI+ + PI +Q I
Sbjct: 25 QVKNR-IEKLDDLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 84 PTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI + Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R
Sbjct: 144 DDA-MPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+
Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQT 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK + + + + ++ Y +
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTYTEPEN 372
>gi|34763498|ref|ZP_00144440.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|237741285|ref|ZP_04571766.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13]
gi|294784507|ref|ZP_06749796.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27]
gi|27886827|gb|EAA23958.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|229430817|gb|EEO41029.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13]
gi|294487723|gb|EFG35082.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27]
Length = 425
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 201/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q I
Sbjct: 25 QVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 84 PTIQEIHQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R
Sbjct: 144 DDA-MPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+
Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQT 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK + + G + + ++ Y +
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTYTEPEN 372
>gi|256846428|ref|ZP_05551885.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2]
gi|256718197|gb|EEU31753.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2]
Length = 425
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 201/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q I
Sbjct: 25 QVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 84 PTIQEIHQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R
Sbjct: 144 DDA-MPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+
Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQT 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK + + G + + ++ Y +
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTYTEPEN 372
>gi|256026982|ref|ZP_05440816.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
gi|289764966|ref|ZP_06524344.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
gi|289716521|gb|EFD80533.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
Length = 425
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 198/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + DL + E+ + +KE +A+TP +LI+ + PI +Q I
Sbjct: 25 QVKNR-IEKLDDLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E+ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 84 PTIQEIYQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI + Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R
Sbjct: 144 DDA-MPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+
Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQT 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK + + + + ++ Y +
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTYTEPEN 372
>gi|294500786|ref|YP_003564486.1| KamA family protein [Bacillus megaterium QM B1551]
gi|294350723|gb|ADE71052.1| KamA family protein [Bacillus megaterium QM B1551]
Length = 470
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + ++ + + +TP A+L+NP +P P+ Q +
Sbjct: 32 QLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PVGKELHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI + ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L L++ PV++ H N E +EE A L +AG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + I + + ++ YP S
Sbjct: 329 SGYAVPTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379
>gi|150392234|ref|YP_001322283.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
gi|149952096|gb|ABR50624.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
Length = 414
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 210/351 (59%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + +DL + ++ + I+E + +TP A+L++ + N P+ Q +
Sbjct: 24 QVKNR-IATVEDLKKVIDLTSQEEEAIEECLQTLRMGITPYYASLMDKEDSNCPVRMQAV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL++ + +DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Q
Sbjct: 83 PIMSELSMGSADMDDPLHEDVDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQQ 142
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +AA+ YI + QI +V+ +GGD L+ S +RL+ ++ LR I+HV+I+R
Sbjct: 143 -DSGMPLDRIDAAIDYIAKTPQIRDVLLSGGDCLLASDERLEYIISKLRAIEHVEIIRLG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP+V PQRI P L+ LK+ P+++ H NH E ++E+ AI LANAGI L +QS
Sbjct: 202 SRVPVVMPQRITPSLVNMLKKY-HPIWLNTHFNHSKEITKESKEAIELLANAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND I+ +L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 VLLKGVNDCVHIMRDLVHDMVKMRVRPYYIYQCDLSRGIEHFRTPVAKGIEIIEGLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + N + ++ ++ Y S
Sbjct: 321 SGYAVPTFVVDAPGGGGKIPVMPNYVLSQSNNKVVLRNYEGVITTYTEPES 371
>gi|295706131|ref|YP_003599206.1| KamA family protein [Bacillus megaterium DSM 319]
gi|294803790|gb|ADF40856.1| KamA family protein [Bacillus megaterium DSM 319]
Length = 470
Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + ++ + + +TP A+L+NP +P P+ Q +
Sbjct: 32 QLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PVGKELHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI + ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L L++ PV++ H N E +EE A L +AG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + I + + ++ YP S
Sbjct: 329 SGYAVPTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379
>gi|19705171|ref|NP_602666.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296328274|ref|ZP_06870803.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|19713110|gb|AAL93965.1| Lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296154578|gb|EFG95366.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 425
Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 118/351 (33%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q I
Sbjct: 25 QVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 84 PTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R
Sbjct: 144 DDA-MPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q+
Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQT 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK + + + + ++ Y +
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTYTEPEN 372
>gi|258513921|ref|YP_003190143.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257777626|gb|ACV61520.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 427
Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 205/351 (58%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLR++ ++S +L + + I++ + + +A+TP A+LIN + PI Q I
Sbjct: 22 QLRNRIMSS-DELDQYANLSVYEKASIQKAIDVFPMAITPYYASLINKDDSTCPIRMQCI 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL + +DP+ ++ SP G+ HRYPDR+LL + + C +YCR C R+ VG
Sbjct: 81 PNPKELIKGSGDMDDPLHEDGDSPCPGLTHRYPDRVLLLVTNECSMYCRHCTRKRKVG-D 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
V D A+ YI+ I +V+ +GGDP +LS RL+++++ +R I HVQ++R
Sbjct: 140 NEKVSKDSDIIKAIEYIKAHPDIRDVLLSGGDPFVLSTNRLEQIIRRVREIPHVQVIRIG 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L++ LK+ P++I H NHP EF+EE+ A+++LA+AGI L +Q+
Sbjct: 200 TRTPVVMPQRITDHLVKMLKKY-HPIWINTHFNHPREFTEESARALAKLADAGIPLGNQT 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND I+ L V R++PYYL+ DL+ G HFR + +G +I+ +L
Sbjct: 259 VLLKGINDCAFIIKKLAHLLVSNRVRPYYLYQCDLSRGIEHFRTPVSKGVEIMEALIGHT 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + ++ ++ Y ++
Sbjct: 319 SGFAVPTFVVDAPGGGGKIPVLPNYQLSSTSTKTVLRNYEGVICIYEEPAN 369
>gi|20092773|ref|NP_618848.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A]
gi|19918069|gb|AAM07328.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A]
Length = 419
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 202/352 (57%), Gaps = 5/352 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R++ +T+ ++L + + +IK+ +S+A++P A+LI+P +P PI Q +
Sbjct: 22 QYRNR-ITTVEELEKLIPLSDPEKADIKKALEVFSMAISPYYASLIDPEDPKCPIRMQAV 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P EL E EDP+ ++ SP K I HRYPDR+L + + C +YCR C R+ VG
Sbjct: 81 PLSAELQKSSWELEDPLCEDLDSPSKESCITHRYPDRVLFLISNRCGMYCRHCTRKRRVG 140
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + S K + YI+E ++ +V+ +GGD L++S +RL +L L I HV+I+R
Sbjct: 141 N-REYDYSEKTIREGIEYIREHPEVRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIVR 199
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R P+ PQRI PEL + L + V++ H NHP E + EA A+ LA AGI L +
Sbjct: 200 IGTRAPVTLPQRITPELCEILGKYPS-VWLNTHFNHPKEITSEAKKAMGMLARAGIPLGN 258
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND P I+ L + ++ +PYYL+ DL+ G HFR ++ G +I+ L+
Sbjct: 259 QSVLLRGVNDCPMIIKKLCHELLRIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEMLRG 318
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P +++D PGG GK+ + + + + + ++ ++ YP +
Sbjct: 319 HTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICMYPEPA 370
>gi|294499134|ref|YP_003562834.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551]
gi|294349071|gb|ADE69400.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551]
Length = 469
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + +DL + ++ + +K + + +TP A L++ ++P PI Q +
Sbjct: 32 QLTN-TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDENDPKCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI QI +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L LK+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +I+D PGG GK+ + + I + + + ++ YP +
Sbjct: 329 SGYAVPTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYPEPQN 379
>gi|254303334|ref|ZP_04970692.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323526|gb|EDK88776.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 425
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 116/351 (33%), Positives = 197/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + DL + E+ + + +A+TP +LI+ ++ PI +Q I
Sbjct: 25 QVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPIRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 84 PTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R
Sbjct: 144 DDA-MPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q+
Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQT 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK + + + + ++ Y +
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTYTEPEN 372
>gi|228991284|ref|ZP_04151242.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442]
gi|228997381|ref|ZP_04157001.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17]
gi|229005016|ref|ZP_04162741.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
gi|228756220|gb|EEM05540.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
gi|228762340|gb|EEM11266.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17]
gi|228768508|gb|EEM17113.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442]
Length = 482
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 202/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q +
Sbjct: 42 QLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSV 100
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 101 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 159
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 160 IGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIG 219
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 220 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQA 278
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 279 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 338
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 339 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 389
>gi|262066228|ref|ZP_06025840.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693]
gi|291380084|gb|EFE87602.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693]
Length = 425
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 117/351 (33%), Positives = 198/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + DL + E+ + + +A+TP +LI+ ++ P+ +Q I
Sbjct: 25 QVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPVRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 84 PTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R
Sbjct: 144 DDA-MPMDRIDRAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLREIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI PEL LK+ P+++ H NHP E + EA A LANAG+ L +Q+
Sbjct: 203 TRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLANAGVPLGNQT 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK + + G + + ++ Y +
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTYTEPEN 372
>gi|237739441|ref|ZP_04569922.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31]
gi|229423049|gb|EEO38096.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31]
Length = 425
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 116/351 (33%), Positives = 197/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + DL + E+ + + +A+TP +LI+ ++ PI +Q I
Sbjct: 25 QVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPIRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 84 PTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R
Sbjct: 144 DDA-MPMDRIDRAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q+
Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQT 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK + + + + ++ Y +
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTYTEPEN 372
>gi|295704462|ref|YP_003597537.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319]
gi|294802121|gb|ADF39187.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319]
Length = 469
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + +DL + ++ + +K + + +TP A L++ ++P PI Q +
Sbjct: 32 QLTN-TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDVNDPKCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI QI +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L LK+ PV++ H N E +EE+ A L+NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLSNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +I+D PGG GK+ + + I + + + ++ YP +
Sbjct: 329 SGYAVPTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYPEPQN 379
>gi|21227036|ref|NP_632958.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1]
gi|20905357|gb|AAM30630.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1]
Length = 419
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 122/352 (34%), Positives = 204/352 (57%), Gaps = 5/352 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R++ +T+ ++L L+ + +IK+ + +A++P A+LI+P +P P+ Q +
Sbjct: 22 QYRNR-ITTVEELEKLILLSDTEKRDIKKALEVFPMAISPYYASLIDPDDPECPVRLQAV 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
PQ EL E EDP+ ++ SP + I HRYPDR+L + + C +YCR C R+ VG
Sbjct: 81 PQSAELQKSSWELEDPLCEDQDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRVG 140
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + S K + YI+ ++ +V+ +GGD L++S +RL +L L I HV+I+R
Sbjct: 141 N-REHDYSEKAIREGIEYIRMHHEVRDVLLSGGDALLVSDERLDWLLGELFSIPHVEIVR 199
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R P+ PQRI PEL + L + V++ H NHP E + EA A++ LA AGI L +
Sbjct: 200 LGTRAPVTLPQRITPELCEILGKYPS-VWLNTHFNHPKEITPEAKKAMNMLACAGIPLGN 258
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+ +ND P I+ NL ++++ +PYYL+ DL+ G HFR ++ G +I+ L+
Sbjct: 259 QSVLLRRVNDCPVIIKNLCHELLKIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEMLRG 318
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P +++D PGG GK+ + + + + + ++ ++ YP +
Sbjct: 319 HTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICVYPEPA 370
>gi|193213047|ref|YP_001999000.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum
NCIB 8327]
gi|193086524|gb|ACF11800.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum
NCIB 8327]
Length = 440
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 127/354 (35%), Positives = 201/354 (56%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q+RH ++ + EQ E + ++ TP +LIN + NDP+
Sbjct: 29 QMRH-SIRDLDTFERLLDITLSDEQRKAFGETVQKFPMSTTPYYLSLINTDDMENDPVFL 87
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+ V
Sbjct: 88 QSVPSPLELKIMKGDMADPLHEDEDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRKV 147
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + T+ + +A + YI+ Q+ +V+ +GGDP +LS + L +L LR I+HV+I+
Sbjct: 148 G-DEDTIPNRAAIQAGIDYIRNTPQVRDVLLSGGDPFLLSDEMLDWILTELRAIEHVEII 206
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V PQRI PEL+ L + +PV++ H NHP E ++ A A++RLA+ G+ L
Sbjct: 207 RVGTRTPVVLPQRITPELVAILGKH-QPVWVNTHFNHPREMTQSARNALARLADVGVPLG 265
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 266 NQTVLLSGINDCPRIMKALVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESLI 325
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG C P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 326 GHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379
>gi|189500579|ref|YP_001960049.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
gi|189496020|gb|ACE04568.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
Length = 437
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 125/354 (35%), Positives = 202/354 (57%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q+RH ++ + + ++Q + + + I++TP +LIN + NDP+
Sbjct: 29 QMRH-SIKDLETFEALLDVKLSEKQRKAFGKAAEKFPISITPYYLSLINTEDMENDPVFL 87
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P ELNI+ + DP+ +++ SP + HRYPDR+LL + +VCP+YCR C R+ V
Sbjct: 88 QSVPSPLELNIVKGDMSDPLHEDSDSPAPCVTHRYPDRVLLLVSNVCPMYCRHCTRKRKV 147
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + T+ E + YI+ QI +V+ +GGDP +LS L +L LR I+HV+I+
Sbjct: 148 G-DEDTIPKRSAIEQGIRYIRNNPQIRDVLLSGGDPFLLSDDYLDWILSELRKIEHVEII 206
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V P RI +L+ LK+ +PV++ H NH E ++ A A+ LA+ G+ L
Sbjct: 207 RIGTRTPVVLPCRITSDLVAILKKH-QPVWVNTHFNHSREITQSARNALGMLADGGVPLG 265
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL GIND P I+ L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 266 NQTVLLSGINDCPRIMKALVHKLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESLI 325
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG C P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 326 GHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379
>gi|145220171|ref|YP_001130880.1| L-lysine 2,3-aminomutase [Prosthecochloris vibrioformis DSM 265]
gi|145206335|gb|ABP37378.1| L-lysine 2,3-aminomutase [Chlorobium phaeovibrioides DSM 265]
Length = 441
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 127/354 (35%), Positives = 207/354 (58%), Gaps = 6/354 (1%)
Query: 2 QLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q+R+ + L + + L + EQ + + + + +++TP +LIN + NDP+
Sbjct: 29 QMRNSIRDLKTYESLLG-IKLSHEQREAFTQTAAKFPMSITPYYLSLINTADMENDPVFL 87
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL+ILP + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+ V
Sbjct: 88 QSVPSPRELHILPGDMADPLHEDRDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRKV 147
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + T+ S A + YI++ ++ +V+ +GGDP +LS + L +L LR I HV+I+
Sbjct: 148 G-DQDTIPSRAAISAGIEYIRQTPRVRDVLLSGGDPFLLSDEYLDWILTELRAIPHVEII 206
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V PQRI PEL+ LK+ +PV++ H NHP E ++ + A++ LA+ G+ L
Sbjct: 207 RIGTRTPVVLPQRITPELVAMLKKH-QPVWVNTHFNHPRELTQSSKNALAMLADGGLPLG 265
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 266 NQTVLLSGINDCPRIMKALVHKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESLI 325
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 326 GHTSGFSVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379
>gi|229085246|ref|ZP_04217488.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44]
gi|228697965|gb|EEL50708.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44]
Length = 482
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 201/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q +
Sbjct: 42 QLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSV 100
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 101 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 159
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI + Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 160 IGMGVPKKQLDDAIAYISQTPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIG 219
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 220 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQA 278
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 279 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 338
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 339 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 389
>gi|28210601|ref|NP_781545.1| L-lysine 2,3-aminomutase [Clostridium tetani E88]
gi|28203039|gb|AAO35482.1| L-lysine 2,3-aminomutase [Clostridium tetani E88]
Length = 424
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 116/350 (33%), Positives = 199/350 (56%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ +T+ L + E+ + I + + ++P A LI+P +PNDP+ +Q +
Sbjct: 24 QVKNR-ITTIDQLKKIINLLPEEEEAIDKCLKTLRMGISPYYATLIHPDDPNDPVRKQAV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL+ + DP+ ++ SP+ G+ H YPDR+LL + +C +YCR C RR G
Sbjct: 83 PTLHELSFSEADMFDPLHEDASSPVPGLTHAYPDRVLLLVTDMCSMYCRHCTRRRFAGH- 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + AL YI+ + +V+ +GGD ++S + + +LK LR I HV+I+RF
Sbjct: 142 TDNSMPQNRIDMALDYIRNTPTVRDVLLSGGDGFMISDENIDYILKNLREIPHVEIIRFG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V+P RI L+ LK+ P+++ H NHP E +E +I A +LANAGI + +Q+
Sbjct: 202 TRTPVVNPMRITDNLVNILKKY-HPIWVNTHFNHPNEITEYSIKACEKLANAGIPIGNQT 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND I +L+ V++R++PYYL+ DL+ G HFR + +G +I+ L+
Sbjct: 261 VLLRGINDCVYIQKDLVHKLVKMRVRPYYLYQCDLSQGIEHFRTKVSKGIEIIEGLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P +++D PGG GK+ + + + ++ ++ Y +
Sbjct: 321 SGFAVPTFVVDAPGGGGKIPVMPQYLISQSPTKVVLRNYEGVITTYTEPN 370
>gi|294783510|ref|ZP_06748834.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA]
gi|294480388|gb|EFG28165.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA]
Length = 425
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 117/351 (33%), Positives = 197/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + DL + E+ + + +A+TP +LI+ ++ P+ +Q I
Sbjct: 25 QVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPVRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 84 PTIQEIHQADADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R
Sbjct: 144 DDA-MPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLREIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LANAG+ L +Q+
Sbjct: 203 SRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLANAGVPLGNQT 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK + + + + ++ Y +
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTYTEPEN 372
>gi|152975473|ref|YP_001374990.1| lysine 2,3-aminomutase YodO family protein [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152024225|gb|ABS21995.1| lysine 2,3-aminomutase YodO family protein [Bacillus cytotoxicus
NVH 391-98]
Length = 472
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 202/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDEAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIMKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379
>gi|310780280|ref|YP_003968612.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter
polytropus DSM 2926]
gi|309749603|gb|ADO84264.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter
polytropus DSM 2926]
Length = 716
Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats.
Identities = 126/354 (35%), Positives = 203/354 (57%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
QL+H ++ + L + + + +++ + A TP +LI+ + NDP+ +
Sbjct: 29 QLKH-SIKDIETLESVFDVELDAKDKKSMQKTIEQFPFAATPYYLSLIDIGDYKNDPVYK 87
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EELN+ + DP+ +++ SP+ GI HRYPDR+LL + +VC +YCR C R+ V
Sbjct: 88 QAVPDIEELNLTNCDMSDPLHEDHDSPVPGITHRYPDRVLLLVSNVCSMYCRHCTRKRKV 147
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + + + YI+ ++I +V+ +GGDP +LS L +L ++ I HV+++
Sbjct: 148 GDM-DNIPDKETIMNGIEYIKSHTEIRDVLLSGGDPFLLSDDYLDWILSEVKKIPHVEVI 206
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V PQRI LI LK+ P++I H NHP EF+EE+ +ISRLA+AGI L
Sbjct: 207 RIGTRTPVVLPQRITDNLINVLKKH-HPIWINTHFNHPKEFTEESKKSISRLADAGIPLG 265
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL +ND P+I+ L+ V RI+PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 266 NQSVLLSRVNDCPKIMKKLVHNLVANRIRPYYLYQCDLSEGLSHFRTPVGKGIEIIESLI 325
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + ++ ++ Y +
Sbjct: 326 GHTSGFAIPRYVIDAPGGGGKIPVMPSYLISWSQNKVILRNYEGVITTYREPDN 379
>gi|157692660|ref|YP_001487122.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032]
gi|157681418|gb|ABV62562.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032]
Length = 466
Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 205/349 (58%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + +DL + +E+ + +K + + +TP A+L+NP +P P+ Q +
Sbjct: 32 QLTH-TVKTLEDLEKIVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+ YI+E ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI EL + LK+ PV++ H N E ++EA A RL NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 329 SGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYPEP 377
>gi|194016677|ref|ZP_03055290.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061]
gi|194011283|gb|EDW20852.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061]
Length = 466
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 205/349 (58%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + +DL + +E+ + +K + + +TP A+L+NP +P P+ Q +
Sbjct: 32 QLTH-TVKTLEDLEKVVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+ YI+E ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI EL + LK+ PV++ H N E ++EA A RL NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 329 SGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYPEP 377
>gi|95930512|ref|ZP_01313247.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95133347|gb|EAT15011.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 437
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 127/354 (35%), Positives = 206/354 (58%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q+ K + S D I+ E +I++ + + +++TP +LIN + NDP+ R
Sbjct: 31 QM-SKCIKSVDDFEQLLGIEFEPEYRKKIEQTVDTFPLSITPYYLSLINTDDYANDPVFR 89
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EEL +L + DP+ ++ SP GI HRYPDR+L + ++C +YCR C R+ V
Sbjct: 90 QAFPVPEELQVLDHDMADPLAEDQDSPAPGITHRYPDRVLFHISNICSMYCRHCTRKRKV 149
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + TV ++ EA L YI+ + +V+ +GGDPL+LS L +L L I+HVQ++
Sbjct: 150 G-DQDTVPGREEIEAGLEYIRNNPVVRDVLLSGGDPLMLSDDHLDWILTELDQIEHVQVV 208
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R+P+V P RI +L+ LK+ P+++ H NHP E + + A+ +LA+AGI L
Sbjct: 209 RLGTRMPVVLPYRITDDLVAVLKKH-HPIWVNTHFNHPREMTTSSKEAVRKLADAGIPLG 267
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND P I+ L+ V R++PYYL+ DL+ G +HFR + +G +I+ SL+
Sbjct: 268 NQSVLLAGVNDCPRIMKALVHKLVANRVRPYYLYQCDLSEGLNHFRTPVGKGIEIMESLR 327
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ ++ + + + + ++ ++ Y S
Sbjct: 328 GHTSGFSVPTYVVDAPGGGGKIPLNPNYLVSLSTNKVVLRNYEGVITTYKEPDS 381
>gi|298372919|ref|ZP_06982909.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275823|gb|EFI17374.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058]
Length = 411
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 202/350 (57%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + + L + E+ + +KE +A+TP +LI+ NPN P+ +Q I
Sbjct: 23 QVQNR-IETLEQLKKYIKLTTEEENGVKESLKTLRMAITPYYLSLIDQSNPNCPVRKQAI 81
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G Q
Sbjct: 82 PTHAETHHSAADLLDPLHEDGDSPAPGLTHRYPDRVLLLVTDMCSMYCRHCTRRRFAG-Q 140
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S D A+ YI Q+ +V+ +GGD L++S RL+ ++ LR I HV+I+R
Sbjct: 141 TDSSSSKDDISKAIDYIARTPQVRDVLLSGGDALMISDTRLESIISRLREIPHVEIIRIG 200
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI +L+ LK+ P+++ H NHP E +EE+IAA R+ANAGI L +QS
Sbjct: 201 TRTPVVCPQRITDDLVNMLKKY-HPIWLNTHFNHPQEVTEESIAACERMANAGIPLGNQS 259
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+
Sbjct: 260 VLLRGVNDCVPTMKKLVHQLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIENLRGHT 319
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P +++D PGG GK + + + G + + ++ Y
Sbjct: 320 SGYAVPTFVVDAPGGGGKTPVMPNYVISQGPHKVILRNFEGVITTYTEPD 369
>gi|116748157|ref|YP_844844.1| lysine 2,3-aminomutase YodO family protein [Syntrophobacter
fumaroxidans MPOB]
gi|116697221|gb|ABK16409.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB]
Length = 460
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 121/350 (34%), Positives = 199/350 (56%), Gaps = 2/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLR++ + + L + +++ + +A+TP A+L++ ++P+ P+ R +
Sbjct: 93 QLRNR-IQDREALARIIRLSDDELKAVTSGRGPLPVAITPYYASLLDCNDPSQPVRRCVV 151
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E P E EDP+G+ S L +VHRYPDR+L + C YCR+C R MVG++
Sbjct: 152 PVDREYFHHPCETEDPLGEEKDSQLPNLVHRYPDRVLFLVTGYCSTYCRYCTRSRMVGNR 211
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
++ + A+ YI+ I +V+ +GGDPL L + L+ +L LR I HV+ LR
Sbjct: 212 GTYRFGHREWDRAIEYIERTPTIRDVLLSGGDPLTLPNDHLKWLLSRLRRIPHVEFLRIG 271
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
++VP+V PQR+ L++ LK+ P++++IH HP E + E A +RLA+AGI L SQ+
Sbjct: 272 TKVPVVLPQRVTMGLVRMLKQY-HPLWMSIHFTHPDELTPETAHACTRLADAGIPLGSQT 330
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+ND+ E + L +++R+KPYYL+ D G+SHFR + +G +I+ L+
Sbjct: 331 VLLSGVNDNVETMTRLFHGLLKIRVKPYYLYQCDPIPGSSHFRTPVSKGLEIIRGLRGFT 390
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P Y++D PGG GKV + + + ++ ++ YP +
Sbjct: 391 SGYAVPTYVIDAPGGGGKVPLLPEYVAGRDGDDLLLRNYAGDLYRYPDPA 440
>gi|52080665|ref|YP_079456.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580]
gi|52786038|ref|YP_091867.1| hypothetical protein BLi02294 [Bacillus licheniformis ATCC 14580]
gi|319645375|ref|ZP_07999608.1| KamA protein [Bacillus sp. BT1B_CT2]
gi|52003876|gb|AAU23818.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580]
gi|52348540|gb|AAU41174.1| KamA [Bacillus licheniformis ATCC 14580]
gi|317393184|gb|EFV73978.1| KamA protein [Bacillus sp. BT1B_CT2]
Length = 469
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 204/351 (58%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + +DL + KE+ + ++ + + +TP A+L+NP +P PI Q +
Sbjct: 32 QLTN-TVRTLEDLKKVVNLTKEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PLAEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI++ + +V+ +GGD L+++ + L+ +LK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDQAIGYIRDTPDVRDVLISGGDGLLINDQILEYILKNLRAIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI +L LK+ PV++ H N E ++EA A +L NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDKLCSILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ I + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIAIQPNYLISQSPDKVVLRNFEGVITSYPEPEN 379
>gi|225181511|ref|ZP_03734953.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
gi|225167759|gb|EEG76568.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
Length = 423
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 131/349 (37%), Positives = 202/349 (57%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ LT+ ++L + + + + + +A+TP A L+NP + N PI Q I
Sbjct: 24 QLKNR-LTTVEELRQVVALTEAEERGVASCLDTLRMAITPYYAMLMNPEDSNCPIRLQAI 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL E EDP+ ++ SP G+ HRYPDR+LL + C +YCR C RR M G+
Sbjct: 83 PTATELESGECEAEDPLFEDVDSPAPGLTHRYPDRVLLLITDQCSMYCRHCTRRRMAGT- 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L D + AL YI+ I +V+ +GGD L++S L +L LR I+HV+I+R
Sbjct: 142 NDQALPRSDVDKALDYIRNTPGIRDVLISGGDALLISDDYLDDILGKLRAIEHVEIIRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQR+ PEL LK+ P++I H NHP E ++EA A+S LA+AGI L +QS
Sbjct: 202 TRTPVVLPQRVTPELCNVLKKH-HPLFINTHFNHPTELTDEAKKAVSMLADAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND P + L + + RI+PYYL+ DL+ G HFR ++ +G +I+ L+
Sbjct: 261 VLLRGINDCPYLYKVLAQRLLMNRIRPYYLYQCDLSPGLEHFRTSVAKGIEIIEHLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P +++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 321 SGLAVPTFVVDAPGGGGKIPVSPQYMISMSDEKVILRNYEGVIAAYTEP 369
>gi|317152560|ref|YP_004120608.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316942811|gb|ADU61862.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 437
Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 123/354 (34%), Positives = 198/354 (55%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q+R+ + + D I + ++ + +A+TP +LI+ + NDP+
Sbjct: 30 QVRN-AVKTVDDFERVLGIEFPARKKRVYEQTLGKFPMAVTPYYLSLIDVDDYANDPVFL 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EEL I + DP+ ++ SP+ GI HRYPDR+L + + C +YCR C R+ V
Sbjct: 89 QSFPSPEELKIGRYDMTDPLHEDEDSPVPGITHRYPDRVLFHVSNTCAMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G ++ S + E L YI+ Q+ +V+ +GGDPL+LS ++L +L +R I HV+++
Sbjct: 149 G-DVDSIPSRDNLERGLEYIRNTPQVRDVLLSGGDPLMLSDEKLDWLLTEIRAIDHVEVV 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V P RI EL+ L + P+++ H NHP E + + AI RLA+AGI L
Sbjct: 208 RIGTRTPVVLPYRITDELVSMLAKH-HPLWLNTHFNHPRELTASSRRAIQRLADAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND ++ L ++ RI+PYYL+ DL+ G +HFR I +G +I+ SL+
Sbjct: 267 NQSVLLAGVNDCQRLIRTLNLKLIKNRIRPYYLYQCDLSEGLTHFRTPIGKGIEIIESLR 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + G + ++ ++ Y S
Sbjct: 327 GHTSGFSVPTYVVDAPGGGGKIPVMPNYVVSWGPNKVVLRNYEGVITTYHEPES 380
>gi|282164589|ref|YP_003356974.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE]
gi|282156903|dbj|BAI61991.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE]
Length = 435
Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 120/354 (33%), Positives = 202/354 (57%), Gaps = 6/354 (1%)
Query: 2 QLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q+RH + + S ++L +E+ E+++ H+ + +TP +LI+ + NDP+ +
Sbjct: 30 QMRHAVRDIPSFEELTGV-HFNREERRELEKTIEHFPLNITPYYLSLIDTADMKNDPVYK 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EELN+ + DP+ + SP+ GI HRYPDR+L + +VC +YCR C R+ V
Sbjct: 89 QCFPSPEELNVEKCDMVDPLAEEEDSPVPGITHRYPDRVLFLVSNVCAMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G+ + + + YI++ I +V+ +GGDPL+L L +L L I HV+++
Sbjct: 149 GN-VDYIPDRETILKGIDYIRDNPSIRDVLLSGGDPLMLPDDYLDWILSELDNIPHVEVV 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +RVP+V P RI +L++ LK P++I H NHP E + + A+ +LA+AGI L
Sbjct: 208 RIGTRVPVVLPCRITDDLVEMLKGH-HPLWINTHFNHPKEVTPASREALRKLADAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q VLL G+ND P+I+ L + V+ R++PYY+ DL+ G SHFR ++ +G +I+ +L
Sbjct: 267 NQCVLLAGVNDCPQIMKKLFQKLVQNRVRPYYMFQCDLSEGLSHFRTSVSKGIEIIENLV 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + + ++ ++ Y +
Sbjct: 327 GHTSGFAVPTYVVDAPGGGGKIPVMPNYLISSATNKVVMRNYEGVITTYTEPDA 380
>gi|30020383|ref|NP_832014.1| lysine 2,3-aminomutase [Bacillus cereus ATCC 14579]
gi|206971483|ref|ZP_03232433.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134]
gi|218232653|ref|YP_002366998.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264]
gi|228958567|ref|ZP_04120287.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229044042|ref|ZP_04191731.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676]
gi|229069827|ref|ZP_04203109.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185]
gi|229079468|ref|ZP_04212008.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2]
gi|229109738|ref|ZP_04239324.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15]
gi|229127695|ref|ZP_04256684.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4]
gi|229144892|ref|ZP_04273289.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24]
gi|229150521|ref|ZP_04278737.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550]
gi|229178666|ref|ZP_04306030.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W]
gi|229190380|ref|ZP_04317381.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876]
gi|296502862|ref|YP_003664562.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171]
gi|29895934|gb|AAP09215.1| Lysine 2,3-aminomutase [Bacillus cereus ATCC 14579]
gi|206733468|gb|EDZ50640.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134]
gi|218160610|gb|ACK60602.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264]
gi|228593164|gb|EEK50982.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876]
gi|228604824|gb|EEK62281.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W]
gi|228633014|gb|EEK89627.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550]
gi|228638614|gb|EEK95047.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24]
gi|228655772|gb|EEL11621.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4]
gi|228673779|gb|EEL29037.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15]
gi|228703838|gb|EEL56284.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2]
gi|228713230|gb|EEL65123.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185]
gi|228725323|gb|EEL76591.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676]
gi|228801194|gb|EEM48091.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|296323914|gb|ADH06842.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171]
Length = 473
Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 201/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|311030470|ref|ZP_07708560.1| L-lysine 2,3-aminomutase [Bacillus sp. m3-13]
Length = 473
Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + +DL + E+ + +K + + +TP A+L+NP +P PI Q +
Sbjct: 32 QLTN-TIRTLEDLKQVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISKEIYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI QI + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 150 IGMGVPKKQLDAAIAYIASNDQIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L LK+ PV++ H N E +EE+ A L NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKLACEMLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + I + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIAVQPNYIISQSANKVVLRNFEGVITTYPEPEN 379
>gi|242280776|ref|YP_002992905.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
gi|242123670|gb|ACS81366.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
Length = 437
Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 120/354 (33%), Positives = 203/354 (57%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
+R+ T+ + I + + + + +A+TP +LI+ + NDP+
Sbjct: 30 HVRN-TIRTVSGFEKVLGIKFSDSERKKHEMTLRKFPLAITPYYLSLIDEEDYENDPVFL 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EEL I + DP+ ++ SP+ GI HRYPDR+L + ++C +YCR C R+ V
Sbjct: 89 QSFPSPEELKIERCDMTDPLHEDEDSPVPGITHRYPDRVLFHISNLCSMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + ++ S+ E + YI+ Q+ +V+ +GGDP +LS ++L +L + I+HV+++
Sbjct: 149 G-DQDSIPSTSQLEKGIEYIRNTPQVRDVLLSGGDPFMLSDEKLDWILTKIGEIEHVEVV 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R+P+V P RI +L+ LK+ P++I H NHP E ++ + AI++LA+AGI L
Sbjct: 208 RIGTRMPVVLPYRITDDLVNMLKKH-HPLWINTHFNHPREVTDSSRRAIAKLADAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND P ++ L + V+ R++PYYL+ DL+ G SHFR + +G +I+ SL+
Sbjct: 267 NQSVLLAGVNDCPRLIKTLNQKLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESLR 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + I + ++ ++ Y S
Sbjct: 327 GHTSGFAVPTYVVDAPGGGGKIPVMPNYIVSWATNKVVLRNYEGVITTYTEPDS 380
>gi|253582165|ref|ZP_04859388.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium
ATCC 27725]
gi|251835704|gb|EES64242.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium
ATCC 27725]
Length = 382
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 114/337 (33%), Positives = 194/337 (57%), Gaps = 2/337 (0%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
L + E+ + +K+ +A+TP +L++ ++PN P+ +Q IP +E++ +
Sbjct: 3 LKKYITLSAEEEEGVKKTLETLRMAITPYYFSLMDINDPNCPVRKQAIPSIKEIHKAEAD 62
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G+ + +
Sbjct: 63 LLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGANDDA-MPMDRIDK 121
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
A+ YI + Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R SR P+V PQRI
Sbjct: 122 AIEYIAKTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRIGSRTPVVLPQRIT 181
Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
PEL++ LK+ P+++ H NHP E + E+ A +ANAGI L +QSVLL+GIND +
Sbjct: 182 PELVEMLKKY-HPIWLNTHFNHPKEVTPESKKACELMANAGIPLGNQSVLLRGINDCVHV 240
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D
Sbjct: 241 MKRLVHDLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDA 300
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
PGG GK + + + + ++ Y
Sbjct: 301 PGGGGKTPVMPQYVISQAPHKVVLRNFEGVITTYTEP 337
>gi|229161268|ref|ZP_04289255.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803]
gi|228622364|gb|EEK79203.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803]
Length = 473
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 201/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK+LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKSLREIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|182413733|ref|YP_001818799.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1]
gi|177840947|gb|ACB75199.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1]
Length = 403
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 132/351 (37%), Positives = 214/351 (60%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ LTS +L + E+ ++ S+A+TP NLI+ +PN PI +Q I
Sbjct: 31 QLKNR-LTSVAELERYMTLTPEEKAGCLFANHKLSLAITPYFFNLIDREDPNCPIRKQVI 89
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ E+ + EE+ D +G++ HSP+ G+VHRYPDR+L + C YCR+C R +V +
Sbjct: 90 PRAGEMQVSAEEQLDSLGEDAHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSNA 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + E L YI+ ++ +V+ +GGDPL+LS ++L+ ++ LR I HV+ +R
Sbjct: 150 QDYNFHP-EYEQGLRYIEAHPEVRDVLLSGGDPLLLSDRKLEHLISRLRAIPHVEFIRIG 208
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+ PQRI PEL + K+ G P++++IH NHP E + E A RL+ AG+ L +QS
Sbjct: 209 SRIPVFLPQRITPELCEVFKKHG-PIWMSIHVNHPKEATAELKQACDRLSFAGVPLGNQS 267
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDD E++ L+ + +R++PYYL+ DL G SHF++ + +G +I+ +L+
Sbjct: 268 VLLKGVNDDAEVMKALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRKGIEIIQALRGHT 327
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GKV I+ ++K+ + + YP KS+
Sbjct: 328 TGYAIPQYVIDAPGGGGKVPINPDYLEKITDEEVVFRNFEGRRFTYPLKST 378
>gi|160902541|ref|YP_001568122.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95]
gi|160360185|gb|ABX31799.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95]
Length = 436
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 122/349 (34%), Positives = 201/349 (57%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLR++ +T + L + E+ IK +A+TP A L++P NP PI RQ +
Sbjct: 27 QLRNR-ITDVEKLRQIINLTPEEEQGIKNTLKTLRMAITPYFATLMDPDNPKCPIRRQAV 85
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL P ++ DP+ ++ SP G+ HRYPDR+L + +C +YCR C RR G Q
Sbjct: 86 PSSKELIKGPWDQIDPLHEDADSPAPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-Q 144
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +A+L YI++ Q+ +V+ +GGD L+ L+ +L L+ I HV+++R
Sbjct: 145 TDSNRKRNEIDASLQYIRDTPQVRDVLLSGGDALMAGIPILEYILSELKKIPHVEVVRIG 204
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+V PQ I L+ LK+ P+++ NHP E + E+ A +LA+AGI L +QS
Sbjct: 205 TRVPVVFPQLITDNLVNVLKKY-HPLWLNTQFNHPKEITPESAEACRKLADAGIPLGNQS 263
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND I+ L+ V++R++PYYL+ DL+ G HFR ++ +G +I+ SL
Sbjct: 264 VLLRGVNDSKYIIMELVHELVKIRVRPYYLYQCDLSQGIEHFRTSVSKGIEIMESLIGHT 323
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK++I + + + + ++ ++ Y
Sbjct: 324 SGFAIPEFVVDAPGGGGKIRIMPNYLISQNKDTVILRNYEGVISTYHEP 372
>gi|47565659|ref|ZP_00236699.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241]
gi|47557295|gb|EAL15623.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241]
Length = 473
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 201/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|30262308|ref|NP_844685.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames]
gi|47527599|ref|YP_018948.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor']
gi|49185154|ref|YP_028406.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne]
gi|49479498|ref|YP_036410.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52143159|ref|YP_083670.1| lysine 2,3-aminomutase [Bacillus cereus E33L]
gi|65319605|ref|ZP_00392564.1| COG1509: Lysine 2,3-aminomutase [Bacillus anthracis str. A2012]
gi|118477725|ref|YP_894876.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam]
gi|165870485|ref|ZP_02215139.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488]
gi|167632881|ref|ZP_02391207.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442]
gi|167639704|ref|ZP_02397974.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193]
gi|170686947|ref|ZP_02878166.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465]
gi|170706603|ref|ZP_02897062.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389]
gi|177649254|ref|ZP_02932256.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174]
gi|190565714|ref|ZP_03018634.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I]
gi|196033856|ref|ZP_03101267.1| L-lysine 2,3-aminomutase [Bacillus cereus W]
gi|196040024|ref|ZP_03107327.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99]
gi|196043261|ref|ZP_03110499.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108]
gi|206974107|ref|ZP_03235025.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97]
gi|217959809|ref|YP_002338361.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187]
gi|218903441|ref|YP_002451275.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820]
gi|222095894|ref|YP_002529951.1| lysine 2,3-aminomutase [Bacillus cereus Q1]
gi|225864277|ref|YP_002749655.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102]
gi|227814883|ref|YP_002814892.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684]
gi|228914904|ref|ZP_04078509.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228927370|ref|ZP_04090427.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228933607|ref|ZP_04096457.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228945921|ref|ZP_04108264.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228985395|ref|ZP_04145554.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229091290|ref|ZP_04222508.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42]
gi|229121855|ref|ZP_04251075.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201]
gi|229139003|ref|ZP_04267580.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26]
gi|229155888|ref|ZP_04283989.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342]
gi|229184527|ref|ZP_04311730.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1]
gi|229196526|ref|ZP_04323270.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293]
gi|229601618|ref|YP_002866645.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248]
gi|254684881|ref|ZP_05148741.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CNEVA-9066]
gi|254722289|ref|ZP_05184077.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A1055]
gi|254737328|ref|ZP_05195032.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Western North
America USA6153]
gi|254743487|ref|ZP_05201172.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Kruger B]
gi|254751644|ref|ZP_05203681.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Vollum]
gi|254760163|ref|ZP_05212187.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Australia 94]
gi|301053835|ref|YP_003792046.1| lysine 2,3-aminomutase [Bacillus anthracis CI]
gi|30256939|gb|AAP26171.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames]
gi|47502747|gb|AAT31423.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor']
gi|49179081|gb|AAT54457.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne]
gi|49331054|gb|AAT61700.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51976628|gb|AAU18178.1| lysine 2,3-aminomutase [Bacillus cereus E33L]
gi|118416950|gb|ABK85369.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam]
gi|164713640|gb|EDR19163.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488]
gi|167512413|gb|EDR87789.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193]
gi|167531693|gb|EDR94358.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442]
gi|170128334|gb|EDS97202.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389]
gi|170668998|gb|EDT19742.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465]
gi|172084328|gb|EDT69386.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174]
gi|190563741|gb|EDV17706.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I]
gi|195993536|gb|EDX57493.1| L-lysine 2,3-aminomutase [Bacillus cereus W]
gi|196025570|gb|EDX64239.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108]
gi|196029283|gb|EDX67887.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99]
gi|206748263|gb|EDZ59652.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97]
gi|217065467|gb|ACJ79717.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187]
gi|218537953|gb|ACK90351.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820]
gi|221239952|gb|ACM12662.1| lysine 2,3-aminomutase [Bacillus cereus Q1]
gi|225789207|gb|ACO29424.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102]
gi|227005066|gb|ACP14809.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684]
gi|228586882|gb|EEK44956.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293]
gi|228598938|gb|EEK56555.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1]
gi|228627495|gb|EEK84221.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342]
gi|228644358|gb|EEL00613.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26]
gi|228661644|gb|EEL17264.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201]
gi|228692056|gb|EEL45797.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42]
gi|228774348|gb|EEM22755.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228813795|gb|EEM60073.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228826067|gb|EEM71850.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228832266|gb|EEM77846.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228844700|gb|EEM89746.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229266026|gb|ACQ47663.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248]
gi|300376004|gb|ADK04908.1| lysine 2,3-aminomutase [Bacillus cereus biovar anthracis str. CI]
gi|324326330|gb|ADY21590.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 473
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 201/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|154248906|ref|YP_001409731.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium
nodosum Rt17-B1]
gi|154152842|gb|ABS60074.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium
nodosum Rt17-B1]
Length = 422
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 122/349 (34%), Positives = 211/349 (60%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + L + E+ + ++ +A+TP A+L++P NP PI RQ +
Sbjct: 25 QIRNR-IMDVDTLKQVINLTPEEEEGVRNALKTLRMAITPYYASLMDPDNPKCPIRRQAV 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL + DP+ ++ SP+ G+ HRYPDR+L+ + +C +YCR C RR G Q
Sbjct: 84 PTAKELFTSQWDMTDPLHEDEDSPVPGLTHRYPDRVLMLVTDMCSMYCRHCTRRRFAG-Q 142
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ ++ +A + Y++E Q+ +V+ +GGD L++ + L+ +LK LR IKHV+I+R
Sbjct: 143 HDRARTKQEIDAMIEYVRETPQVRDVLISGGDGLLVGIEMLEYILKELRKIKHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQ I PEL LK+ P++I H NHP E + E+ A LA+AGI L +QS
Sbjct: 203 TRTPVVLPQMITPELTNMLKKY-HPIWINTHFNHPKEITPESSRACEMLADAGIPLGNQS 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND P I+ L+ V++R++PYY++ DL+ G +HFR ++++G +I+ +L
Sbjct: 262 VLLRGINDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGLTHFRTSVKKGLEIMEALIGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG C P++++D P G GK+++ + + + + + + ++ ++ Y
Sbjct: 322 SGFCVPWFVVDAPAGGGKIRVMPNYVISMSDHTVILRNYEGVIVAYHEP 370
>gi|42781397|ref|NP_978644.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987]
gi|42737319|gb|AAS41252.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987]
Length = 473
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 201/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|291286787|ref|YP_003503603.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
gi|290883947|gb|ADD67647.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 438
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 117/354 (33%), Positives = 204/354 (57%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q RH T+ + +D + I E+ E+K + +A+TP A+LI+ N +DP+ +
Sbjct: 30 QFRH-TIKTVEDFEDVLNISFSPEEKKEMKITLRKFPMAITPYYASLIDIENYKDDPVFK 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q EEL++ E DP+ +++ SP++ + HRYPDR+L + ++C +YCR C R+ V
Sbjct: 89 QSCCSTEELHVESYEMGDPLAEDSDSPVENLTHRYPDRVLFHVSNMCAMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + + + L YI+E ++ +V+ +GGDP +LS ++ +L + I+HV+++
Sbjct: 149 G-DQDHIPAKDSLIKGLEYIREHEEVRDVLLSGGDPFMLSDSAIEWLLDEISSIEHVEVI 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R+P+V P RI +LI L + ++I H NHP E ++ + A+ +L AGI +
Sbjct: 208 RIGTRMPVVLPYRITEDLIDILSKYD-NLWINTHFNHPRELTDSSRQALKKLVKAGIPMG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND P I+ +LM V+ R++PYY++ DL+ G SHFR + +G +I+ SL+
Sbjct: 267 NQTVLLAGVNDCPYIMKSLMHKLVKNRVRPYYIYQCDLSEGLSHFRTPVSKGIEIIESLR 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 327 GHTSGFAVPTYVIDAPGGGGKIPVTPNYVVSYATNKVILRNYEGVICTYKEPDS 380
>gi|218897268|ref|YP_002445679.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842]
gi|228900889|ref|ZP_04065104.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222]
gi|228908066|ref|ZP_04071914.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200]
gi|228939455|ref|ZP_04102043.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228972309|ref|ZP_04132920.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978923|ref|ZP_04139289.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407]
gi|218545608|gb|ACK98002.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842]
gi|228780797|gb|EEM29009.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407]
gi|228787326|gb|EEM35294.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820155|gb|EEM66192.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228851484|gb|EEM96290.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200]
gi|228858815|gb|EEN03260.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222]
gi|326940003|gb|AEA15899.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 473
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|228921012|ref|ZP_04084347.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838558|gb|EEM83864.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 473
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAITYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|229074953|ref|ZP_04207960.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18]
gi|229096796|ref|ZP_04227766.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29]
gi|229102897|ref|ZP_04233591.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28]
gi|229115778|ref|ZP_04245180.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3]
gi|228667661|gb|EEL23101.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3]
gi|228680570|gb|EEL34753.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28]
gi|228686638|gb|EEL40546.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29]
gi|228708181|gb|EEL60347.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18]
Length = 473
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|150400676|ref|YP_001324442.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus
Nankai-3]
gi|150013379|gb|ABR55830.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus
Nankai-3]
Length = 437
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 125/352 (35%), Positives = 199/352 (56%), Gaps = 6/352 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
QL++ ++ IK +++ E++E ++ + +++TP A+LI+ N DPI +
Sbjct: 31 QLKN-SIRDIDTFEEVIGIKFHEDEKAELQEAADVFPLSITPYYASLIDVKNFREDPIFK 89
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q EEL E DP+ ++ SP+ G+ HRYPDRIL + H C VYCR C R+ V
Sbjct: 90 QSFVGVEELITENFEMADPLAEDKDSPVPGLTHRYPDRILFYISHACAVYCRHCTRKRKV 149
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G ++ S K E L YI+ QI +V+ +GGDPL+L L +L L I H++++
Sbjct: 150 G-DTDSIPSKKQIEKGLDYIRNNPQIRDVLLSGGDPLLLPDDYLDWILTELWSIPHIEVI 208
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +RVP+V P RI EL+ LK+ P++I H NH E ++ + A+ +LA+ GI L
Sbjct: 209 RIGTRVPVVLPYRITDELVNMLKKH-HPLWINTHFNHIKEITKSSKNALRKLADVGIPLG 267
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL+G+ND P ++ L + R++PYYL DL+ G SHFR ++ +G +I+ SL
Sbjct: 268 NQSVLLRGVNDCPNVIKKLNQKLAANRVRPYYLFQCDLSEGLSHFRTSVRKGVEIIESLI 327
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ + + + G + ++ ++ Y
Sbjct: 328 GHTSGFAVPRYVVDAPGGGGKIPVMPNYVISWGTDRVILRNYEGVITTYKEP 379
>gi|124485172|ref|YP_001029788.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
gi|124362713|gb|ABN06521.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
Length = 453
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 129/353 (36%), Positives = 201/353 (56%), Gaps = 6/353 (1%)
Query: 2 QLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q+RH + S + I ++ +E++ + I++TP +LI+ + NDPI R
Sbjct: 44 QVRH-AVRSIDMVQQVLGITFDPKEREELQRTVEKFPISITPYYLSLIDTEDYRNDPIFR 102
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EL + E DP+ ++ SP + I HRYPDR+L + + C +YCR C R+ V
Sbjct: 103 QAFPSPAELIVENYELSDPLAEDKDSPCECITHRYPDRVLFLVSNTCAMYCRHCTRKRKV 162
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G K ++ + +AYI+E +QI +V+ +GGDP +LS + L +L L I HV+++
Sbjct: 163 G-DKDSIPDREKILEGIAYIRENTQIRDVLLSGGDPFMLSDESLDWILTELTAIPHVEVI 221
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +RVP+V P RI +L+ LK+ KP++I NHP E + A AA+++L +AGI L
Sbjct: 222 RIGTRVPVVLPFRITNQLVDILKKH-KPIWINTQFNHPKEMTPSAQAAVAKLVDAGIPLG 280
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL IND P I+ L+ V+ RI+PYYL+ DL+ G SHFR I +G +I+ SL
Sbjct: 281 NQSVLLARINDCPVIMKELVHQLVKNRIRPYYLYQCDLSEGISHFRTPIAKGIEIMESLI 340
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P Y++D PGG GK+ + + + + ++ I+ Y +
Sbjct: 341 GHTSGFAVPRYVVDAPGGGGKIPVSPNYLLTWSVNKVVLRNYEGIICTYQEPA 393
>gi|89097814|ref|ZP_01170701.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911]
gi|89087316|gb|EAR66430.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911]
Length = 495
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 203/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + +DL + E+ + +K + + +TP A+L+NP +P P+ Q +
Sbjct: 56 QLTN-TIRNLEDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQSV 114
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 115 PISQEIHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 173
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI+ ++ +V+ +GGD L+++ K L+ +LK LR I HV+I+R
Sbjct: 174 IGMGVPKKQLDDAIAYIRNTPEVRDVLISGGDGLLINDKILEYILKNLREIDHVEIIRIG 233
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L LK+ P+++ H N E +EEA A LA+AG+ + +Q+
Sbjct: 234 TRAPVVFPQRITENLCNILKKY-HPIWLNTHFNTSIEITEEAKKACEMLADAGVPVGNQA 292
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 293 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 352
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 353 SGYAVPTFVVDAPGGGGKIALQPNYLISQSAEKTVLRNFEGVITTYPEPEN 403
>gi|159906176|ref|YP_001549838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C6]
gi|159887669|gb|ABX02606.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C6]
Length = 433
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 128/353 (36%), Positives = 210/353 (59%), Gaps = 6/353 (1%)
Query: 2 QLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIAR 58
QL + ++ L + + + EI++ + +++TP A+LI+ N + DPI +
Sbjct: 31 QLSN-SIKDVDTLEKFLGINLDEGEKREIQKAIEVFPMSITPYYASLIDTENLDKDPIYK 89
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q + +EL + E EDP+ +++ SP+ GI HRYPDR+L + C +YCR C R+ V
Sbjct: 90 QSVASSKELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPSCAMYCRHCTRKRKV 149
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
S+K + S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV+++
Sbjct: 150 -SEKSSNPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELI 208
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SRVP+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+NAGI L
Sbjct: 209 RIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVELTKESKVALDKLSNAGIPLG 267
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 268 NQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESLI 327
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P Y++D PGG GK+ + + I G+ + ++ I+ Y S
Sbjct: 328 GHTTGFAVPRYVVDAPGGGGKIPVMPNYIVSWGSDRVILRNYEGIITTYVEPS 380
>gi|319651187|ref|ZP_08005318.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2]
gi|317397116|gb|EFV77823.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2]
Length = 476
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 201/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + ++ + ++ + + +TP A+L+NP +P PI Q +
Sbjct: 32 QLTN-TIRTVDDLKKVINLTPDEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISKEIYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA++YI+ Q+ +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDAAISYIRSAPQVRDVLISGGDGLLINDNILEYILKNLREIDHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L LK+ PV++ H N E +E++ A LANAG+ + +QS
Sbjct: 210 TRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEDSKRACEMLANAGVPVGNQS 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKISLQPNYLISQSADKVVLRNFEGVITTYPEPEN 379
>gi|294101198|ref|YP_003553056.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium
colombiense DSM 12261]
gi|293616178|gb|ADE56332.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium
colombiense DSM 12261]
Length = 433
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 130/350 (37%), Positives = 206/350 (58%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ +T A+ L + K ++ IK N +A+TP A+LIN ++P+ PI +Q I
Sbjct: 29 QMANR-ITEAKHLEQVVDLTKSELAMIKRSLNVLRMAITPYFASLINRNDPSCPIRKQCI 87
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E I+ ++ DP+ + SP+ G+ HRYPDR LL + C +YCR C RR G Q
Sbjct: 88 PTLQETLIVQSDQLDPLHEEVDSPVPGLTHRYPDRCLLLVTDQCSMYCRHCTRRRFAG-Q 146
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S K+ EA + YI++ I +V+ +GGDPL LS R++ +L+ +R I HV+I+R
Sbjct: 147 TDLPRSEKEIEACIDYIRKTPVIRDVLISGGDPLTLSDDRIEGILREIRAIPHVEIIRIG 206
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+V P RI L LK+ P+++ + NHP E + E+ A +LANAGI L +QS
Sbjct: 207 TRVPVVMPMRITDNLCSMLKKY-HPLWMNLQFNHPREITPESADACQKLANAGIPLGNQS 265
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND P I L + +++R++PYY++ DL+ G HFR +I +G +I+ L+
Sbjct: 266 VLLKGINDCPYIFRELNQQLLKIRVRPYYIYQCDLSQGIEHFRTSIGKGVEIMEFLRGHT 325
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P +++D PGG GK+ + + + + + + ++ Y
Sbjct: 326 SGLAVPTFVVDAPGGGGKIPVMPNYVVSRSDRKTVLRNFEGVLTVYTEPD 375
>gi|228952639|ref|ZP_04114715.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228807105|gb|EEM53648.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 473
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 201/351 (57%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR + HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREVPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|157363352|ref|YP_001470119.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae
TMO]
gi|157313956|gb|ABV33055.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae
TMO]
Length = 419
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 132/351 (37%), Positives = 214/351 (60%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLR++ + + L + ++ + ++ +A+TP A L++P NP PI Q I
Sbjct: 24 QLRNR-IMNLDVLQEVVNLTDQEREGVRHSLKFLRMAITPYYATLMDPENPRCPIRMQAI 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +ELNI EE DP+ ++ SP+KG+ HRYPDR+LL + C +YCR C RR G +
Sbjct: 83 PTAKELNISQEEMIDPLHEDVDSPVKGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG-E 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ LS + +A+ YI++ +I +V+ +GGDPL LS ++L+ ++ +R I+HV+I+R
Sbjct: 142 TDSPLSDELLNSAIDYIKQNKRIRDVLLSGGDPLTLSTEKLENIISRIREIEHVEIIRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+V P RI EL LK+ P+++ H NHP E + ++ A+S LA+AGI L +QS
Sbjct: 202 TRVPVVLPMRITEELTSMLKKY-HPIWLNTHFNHPKEITPQSRRALSMLADAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND P+I+ L+ V+ R++PYY++ DL+ G SHFR T+ +G +I+ L+
Sbjct: 261 VLLRGINDCPQIMKKLVHELVKNRVRPYYIYQCDLSRGLSHFRTTVAKGIEIIEYLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ ++ + +G G + ++ + Y +
Sbjct: 321 SGFAVPTYVIDAPGGGGKIPVEPQYLISMGEGKVVLRNYEGGIFVYHEPRN 371
>gi|228965278|ref|ZP_04126372.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228794512|gb|EEM42024.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 451
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|205373143|ref|ZP_03225947.1| lysine 2,3-aminomutase [Bacillus coahuilensis m4-4]
Length = 468
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 118/349 (33%), Positives = 204/349 (58%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A L+N ++P PI Q +
Sbjct: 32 QLTN-TIRTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNKNDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PLGQEIHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI++ I +V+ +GGD L+++ + L+ ++K+LR I H++I+R
Sbjct: 150 IGMGVPKKQIDRAIQYIKDNDGIRDVLLSGGDALLINDQVLEYIIKSLREIPHIEIIRLG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI +L+ LK+ PV++ H N E ++EA A +L NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDKLVGILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+
Sbjct: 269 VILAGINDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ + + + G+ + + ++ YP
Sbjct: 329 SGYAVPAFVVDAPGGGGKITLQPNYLLAQGSKHVVLRNFEGVITTYPEP 377
>gi|217076542|ref|YP_002334258.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B]
gi|217036395|gb|ACJ74917.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B]
Length = 423
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 130/349 (37%), Positives = 207/349 (59%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ +T L + E+ + I+ +A+TP A+L++P NP PI RQ +
Sbjct: 24 QIRNR-ITDVDTLKQVINLTPEEENGIRNSLKTLRMAITPYYASLMDPDNPKCPIRRQAV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL + P + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Q
Sbjct: 83 PTIKELEVKPWDMVDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAG-Q 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ ++ +AA+ YI+E Q+ +V+ +GGD L+ L+ +LK LR IKHV+I+R
Sbjct: 142 HDRARTKQEIDAAIEYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQ + EL LK+ P+++ H NHP E + E+ A LA+AGI L +QS
Sbjct: 202 SRAPVVIPQIVTKELTDMLKKY-HPIWLNTHFNHPKEITPESSRACEMLADAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND P I+ L+ V++R++PYYL+ DL+ G SHFR +I G +I+ SL
Sbjct: 261 VLLRGVNDSPYIMMELVHQLVKIRVRPYYLYQCDLSQGISHFRTSIGTGLRIIESLIGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG C P Y++D P G GK+++ + + + + ++ ++ Y
Sbjct: 321 SGFCVPTYVVDAPAGGGKIRLMPEYLISYSDKTAILRNYEGVIVAYHEP 369
>gi|258404824|ref|YP_003197566.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium
retbaense DSM 5692]
gi|257797051|gb|ACV67988.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium
retbaense DSM 5692]
Length = 440
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 121/353 (34%), Positives = 203/353 (57%), Gaps = 6/353 (1%)
Query: 2 QLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
QLRH +++ + I E+ + + + +++TP +LI+ + NDP+ +
Sbjct: 30 QLRH-SISDLATVEKLLDIEFDPEKRKQYAKTMEIFPMSVTPYYLSLIDTEDYENDPVFK 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q IP +EL+I + +DP+ ++ SP GI HRYPDR+L + + C +YCR C R+ V
Sbjct: 89 QAIPLPDELDIAVHDMKDPLSEDEDSPAPGITHRYPDRVLFHVSNTCSMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G V D +A L YI+ Q+ +V+ +GGDP +L ++ +L LR I+HV+++
Sbjct: 149 G-DSDFVPCRDDLQAGLDYIRNTPQVRDVLLSGGDPFMLPDHQIDWLLGQLRSIEHVEVI 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR+P+V P RI L+ LK+ P+++ H NHP E ++ + A+++LA+AGI L
Sbjct: 208 RIGSRMPVVLPYRITDNLVSILKKH-HPLWLNTHFNHPRELTQSSRKALAKLADAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND P ++ L+ V+ R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 267 NQTVLLAGVNDCPRLMKTLIHKLVQNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESLI 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P Y++D PGG GK+ + + I G + ++ ++ Y
Sbjct: 327 GHTSGFAVPTYVIDAPGGGGKIPVMPNYIVSWGTNKVILRNYEGVITTYTEPD 379
>gi|296329460|ref|ZP_06871947.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674784|ref|YP_003866456.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153342|gb|EFG94204.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413028|gb|ADM38147.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 471
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 118/351 (33%), Positives = 207/351 (58%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q +
Sbjct: 32 QLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 150 IGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI +L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDQLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKIILRNFEGVITSYPEPEN 379
>gi|321311619|ref|YP_004203906.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5]
gi|320017893|gb|ADV92879.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5]
Length = 471
Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 118/351 (33%), Positives = 206/351 (58%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q +
Sbjct: 32 QLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 150 IGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379
>gi|311068654|ref|YP_003973577.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942]
gi|310869171|gb|ADP32646.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942]
Length = 472
Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 121/349 (34%), Positives = 205/349 (58%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + +L + +E+ + ++ + + +TP A+L+NP NP PI Q +
Sbjct: 32 QLTH-TVRTLDELKKVIHLTEEEEEGVRISTKTIPLNITPYYASLMNPDNPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 150 IGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEP 377
>gi|16079027|ref|NP_389850.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
gi|221309872|ref|ZP_03591719.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
gi|221314195|ref|ZP_03596000.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221319118|ref|ZP_03600412.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323391|ref|ZP_03604685.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. SMY]
gi|4033499|sp|O34676|KAMA_BACSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName:
Full=KAM
gi|2415401|gb|AAB72069.1| YodO [Bacillus subtilis]
gi|2634361|emb|CAB13860.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
Length = 471
Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 118/351 (33%), Positives = 206/351 (58%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q +
Sbjct: 32 QLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 150 IGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379
>gi|150402033|ref|YP_001329327.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
gi|150033063|gb|ABR65176.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
Length = 433
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 129/354 (36%), Positives = 211/354 (59%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIAR 58
QL + ++ L N I E+ EI++ + +++TP A+LI+ N + DPI +
Sbjct: 31 QLSN-SIKDVDTLENFLGITLENEEKKEIQKAIEVFPMSITPYYASLIDIKNLDKDPIYK 89
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q + +EL + E EDP+ ++ SP+ GI HRYPDR+L + C +YCR C R+ V
Sbjct: 90 QSVASSKELILENFEMEDPLSEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRKV 149
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
S+K + S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV+++
Sbjct: 150 -SEKSSNPSKEEIQKAIDYIRNNDKIRDVLLSGGDPLLLSDEYLDWILSEISSIKHVELI 208
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SRVP+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+++GI L
Sbjct: 209 RIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPLG 267
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 268 NQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESLI 327
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GK+ + + I G+ + ++ I+ Y S+
Sbjct: 328 GHTTGFAVPRYVVDAPGGGGKIPVMPNYIVSWGSDRVILRNYEGIITTYVEPSN 381
>gi|291484572|dbj|BAI85647.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. natto BEST195]
Length = 471
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 118/351 (33%), Positives = 206/351 (58%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q +
Sbjct: 32 QLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 150 IGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVTLRNFEGVITSYPEPEN 379
>gi|51246011|ref|YP_065895.1| L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54]
gi|50877048|emb|CAG36888.1| probable L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54]
Length = 439
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 129/354 (36%), Positives = 208/354 (58%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
QLR+ ++ S + + I ++ +IKE + +++TP +LIN + NDPI
Sbjct: 31 QLRN-SIKSVEQFESLLGIEMDEKYRKKIKETLRKFPLSITPYYLSLINSEDYSNDPIFI 89
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P +EL+I P + EDP+ ++ SP+ I HRYPDR+LL++ + C +YCR C R+ V
Sbjct: 90 QSFPSPKELDISPHDMEDPLAEDKDSPVPNITHRYPDRVLLQVSNTCAMYCRHCTRKRKV 149
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G ++ ++ + YI++ I +V+ +GGDPL+LS L +L LR I HVQ++
Sbjct: 150 G-DVDSIPLKQEILNGIEYIRQTPVIRDVLLSGGDPLMLSDDYLDWILSELRTIPHVQVI 208
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR+P+V P R+ L+ LK+ P+++ H NHP E + A+++LANAGI L
Sbjct: 209 RIGSRMPVVLPYRVTDSLVAMLKKH-HPLWVNTHFNHPREVTASTREALAKLANAGIPLG 267
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND P I+ +L+ VE R++PYYL+ DLA G +HFR + +G +I+ SL+
Sbjct: 268 NQSVLLAGVNDCPRIMKSLVHKLVENRVRPYYLYQCDLAEGLNHFRTPVGKGIEILESLR 327
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ ++ + + + ++ ++ Y S
Sbjct: 328 GHTSGFAVPTYVVDAPGGGGKIPLNPNYLVSFSTNKVILRNYEGVITTYQEPDS 381
>gi|229017613|ref|ZP_04174507.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273]
gi|229023830|ref|ZP_04180315.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272]
gi|228737515|gb|EEL88025.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272]
gi|228743682|gb|EEL93788.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273]
Length = 472
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379
>gi|163940087|ref|YP_001644971.1| lysine 2,3-aminomutase YodO family protein [Bacillus
weihenstephanensis KBAB4]
gi|229011567|ref|ZP_04168753.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048]
gi|229133129|ref|ZP_04261965.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196]
gi|229167131|ref|ZP_04294874.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621]
gi|163862284|gb|ABY43343.1| lysine 2,3-aminomutase YodO family protein [Bacillus
weihenstephanensis KBAB4]
gi|228616365|gb|EEK73447.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621]
gi|228650338|gb|EEL06337.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196]
gi|228749722|gb|EEL99561.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048]
Length = 472
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379
>gi|149179692|ref|ZP_01858197.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1]
gi|148851884|gb|EDL66029.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1]
Length = 468
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 118/351 (33%), Positives = 198/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + ++ + + +TP A L+N + PI Q +
Sbjct: 32 QLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYAWLMNEEDDRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PIGKEIHKTKYDMEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDEAINYIRETPQVRDVLLSGGDGLLINDKILEYVLKNLRDIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L LK+ PV++ H N E +EE+ A L +AG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKKACEMLVDAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYMISQSADKVVLRNFEGVITTYPEPEN 379
>gi|194333635|ref|YP_002015495.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris
aestuarii DSM 271]
gi|194311453|gb|ACF45848.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris
aestuarii DSM 271]
Length = 437
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 124/354 (35%), Positives = 201/354 (56%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q+R+ ++ + +Q + E + +++TP +LIN + NDP+ R
Sbjct: 29 QMRN-SIRDLDTFETLLNITLSPDQRNVFNETVKKFPMSITPYYLSLINTSDMENDPVFR 87
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL+I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+ V
Sbjct: 88 QSVPSHHELDIMKGDMADPLHEDQDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRKV 147
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + T+ + + YI+ I +V+ +GGDP +L L +L+ LR I+HV+I+
Sbjct: 148 G-DQDTIPTKTSISKGIDYIRSNPAIRDVLLSGGDPFLLPDDYLDWILEELRKIEHVEII 206
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V P RI PEL+Q L++ +PV++ H NH E ++ A A+S LA+ GI L
Sbjct: 207 RIGTRTPVVLPYRITPELVQILRKH-QPVWVNTHFNHSREMTQSARNALSMLADGGIPLG 265
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL GIND P I+ L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 266 NQTVLLSGINDCPRIMKALVHQLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESLI 325
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG C P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 326 GHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379
>gi|171912149|ref|ZP_02927619.1| Lysine 2,3-aminomutase [Verrucomicrobium spinosum DSM 4136]
Length = 406
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 133/351 (37%), Positives = 211/351 (60%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + S L ++ +E+ + N ++A+TP NLI+P +P+ PI RQ I
Sbjct: 35 QLKNR-VNSLAKLEEHLVLSEEERAGVLLSGNKLAMAITPHFFNLIHPTDPDCPIRRQVI 93
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ EE P+E DP G+++H P+ G+VHRYPDR+L + C YCR+C R +V
Sbjct: 94 PRIEETWDDPDEMSDPCGEDSHMPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRVVSGV 153
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L + + EA Y++ +++ +V+ +GGD L+ S +L+ +LK LR I H++ LR
Sbjct: 154 GDQELHT-EFEAVFKYLEAHTEVRDVLLSGGDALLFSDAKLEGILKRLRAIPHIEFLRIG 212
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVPI PQRI PEL L + P+++++H NHP E + E A+ RLAN GI L +QS
Sbjct: 213 SRVPIFLPQRITPELCTMLAKY-HPLWMSVHTNHPREITIEVKEALERLANHGIPLGNQS 271
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+NDDPE++ L+ + R++PYYL+ DL G+SH R ++ +G +I+ SL+
Sbjct: 272 VLLRGVNDDPEVMKALVHKLLMSRVRPYYLYQCDLIQGSSHLRTSVSKGLEIIESLRGHT 331
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P +++D PGG GKV ++ + + I ++ V DYP +
Sbjct: 332 TGYGVPQFVIDAPGGGGKVPVNPEYVLAKDSHHTLIRNYEGKVFDYPEPET 382
>gi|229059963|ref|ZP_04197337.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603]
gi|228719376|gb|EEL70980.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603]
Length = 472
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I H++I+R
Sbjct: 150 IGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHIEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379
>gi|229172992|ref|ZP_04300544.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3]
gi|228610512|gb|EEK67782.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3]
Length = 473
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLKKVINLIPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|288556721|ref|YP_003428656.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4]
gi|288547881|gb|ADC51764.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4]
Length = 478
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 115/351 (32%), Positives = 197/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + ++ + + +TP A+L+NP +P PI Q +
Sbjct: 32 QLTN-TIRTLDDLKQVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PIGEEIYKTKYDMEDPLEEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI+ ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDGAIDYIKNTPEVRDVLISGGDGLLINDTILEYILKNLRAIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L LK+ PV++ H N E +EE+ A L N+G+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKNACEMLVNSGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ L + V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLCQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D P G GK+ + + + + + ++ YP +
Sbjct: 329 SGYSVPTFVVDAPHGGGKITLQPNYMISQSPDKVVLRNFEGVITTYPEPEN 379
>gi|77919002|ref|YP_356817.1| hypothetical protein Pcar_1401 [Pelobacter carbinolicus DSM 2380]
gi|77545085|gb|ABA88647.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 457
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 199/350 (56%), Gaps = 5/350 (1%)
Query: 6 KTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIP 62
+ + + + + + +++TP A+LI+P + NDP+ Q P
Sbjct: 53 HAIQDIDTFERITGIKLDPKFRENVALTLEKFPLSITPYYASLIDPEDYQNDPVFIQSFP 112
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL + P E DP+ ++ SP+ GI HRYPDR+L + ++C +YCR C R+ VG +
Sbjct: 113 SPHELEVDPREMADPLAEDKDSPVPGITHRYPDRVLFHVSNLCAMYCRHCTRKRKVG-DQ 171
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++ ++ + L YI E QI +V+ +GGDPL+LS + L +L LR I HVQ++R +
Sbjct: 172 DSIPGREEIKQGLEYIAENPQIRDVLLSGGDPLMLSDEYLDWILTALRNIPHVQVIRIGT 231
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V P RI +L+ L++ PV++ H NHP E + A AA+ +LA+AGI L +Q+V
Sbjct: 232 RMPVVLPYRITDDLVDMLRKH-HPVWVNTHFNHPRELTSSARAALRKLADAGIPLGNQTV 290
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL G+ND P I+ LM V+ R++PYYL+ DL+ G HFR + +G +I+ SL S
Sbjct: 291 LLAGVNDCPRIIKELMHRLVDNRVRPYYLYQCDLSEGLMHFRTPVGKGIEIMESLIGHTS 350
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
G P Y++D PGG GK+ ++ + + + + ++ ++ Y S
Sbjct: 351 GFAIPTYVVDAPGGGGKIPLNPNYLVSLSTNKVILRNYEGVITTYQEPHS 400
>gi|160879786|ref|YP_001558754.1| lysine 2,3-aminomutase YodO family protein [Clostridium
phytofermentans ISDg]
gi|160428452|gb|ABX42015.1| lysine 2,3-aminomutase YodO family protein [Clostridium
phytofermentans ISDg]
Length = 393
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 135/349 (38%), Positives = 221/349 (63%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R++ +T+ +L + + +++ EI + + +A+TP A+L++P + N PI Q +
Sbjct: 22 QFRNR-ITTVAELTESIDLTEQEKQEITQCLGKFRMAITPYYASLMDPTDRNCPIRMQAV 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ILP E DP+ + SP+ GIVHRYPDR+L + H C +YCR C RR +VG +
Sbjct: 81 PSNLENRILPCEMADPLNEEGESPVPGIVHRYPDRVLFLVTHQCSMYCRHCTRRRLVG-E 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ V+S K+ + A+ YI+ K +I +V+ +GGDPL +S ++L+ +LK LR I+HV+I+R
Sbjct: 140 EDMVISDKEIDTAVEYIRSKEEIRDVLISGGDPLTMSDEKLEHILKKLRSIEHVEIIRIG 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+V P RI EL L+ +P++I H NHP E +++++ A +RL +AGI L +QS
Sbjct: 200 TRVPVVLPMRITLELTNMLRNY-EPIWINTHFNHPKEITKDSMDACARLVDAGIPLGNQS 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND +I+ +L+ V+ RI+PYYL+ DL+ G HFR +E G +++ L+ I
Sbjct: 259 VLLRGINDSTDIMKDLLLKLVKNRIRPYYLYQCDLSQGLGHFRTRVETGIEMIHHLQGYI 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ ++ I + + + ++ ++ YP
Sbjct: 319 SGYAIPKFVIDAPGGGGKIPVNPEYIISIDDNEVVMRNYKGDLYTYPQP 367
>gi|126178166|ref|YP_001046131.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus
marisnigri JR1]
gi|125860960|gb|ABN56149.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1]
Length = 437
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 119/354 (33%), Positives = 193/354 (54%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
+RH +T + K++ E++E ++ + + +TP +LI+ + NDPI
Sbjct: 30 HVRH-AITEISTFERLLGVSFGKDERRELEETASRFPLRITPYYLSLIDAKDLWNDPIFM 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EL + P++ EDP+ ++ P I HRYPDR+L + +VC +YCR C R+ V
Sbjct: 89 QCFPSPAELQVEPDDMEDPLAEDADHPAPCITHRYPDRVLFLVSNVCAMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G ++ S + +L YI+E I +V+ +GGDP +L RL +L L I+HV+++
Sbjct: 149 G-DVDSIPSEAEVIESLDYIRENPGIRDVLLSGGDPFMLPDDRLDWILTELDDIEHVEVV 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V P RI EL L P+++ H NHP E + + A++RLA+AGI L
Sbjct: 208 RIGTRTPVVLPYRITEELCAMLARH-HPLWVNTHFNHPAEITASSQKALARLADAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND I+ L+ V R++PYYL+ DL+ G +HFR + +G +I+ +L
Sbjct: 267 NQTVLLAGVNDCSRIMKTLVHKLVRNRVRPYYLYQCDLSEGLAHFRTPVSKGIEIIENLI 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + + ++ Y S
Sbjct: 327 GHTSGFAVPTYVIDAPGGGGKIPVMPQYLISWSTNRVVLRNFEGVITTYREPDS 380
>gi|150399966|ref|YP_001323733.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
gi|150012669|gb|ABR55121.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
Length = 433
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 124/354 (35%), Positives = 210/354 (59%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q+ + ++ S L N I + EI++ + +++TP A+LI+ N DPI +
Sbjct: 31 QISN-SIKSLDMLENVLEIKFPDNERKEIQKAIEVFPMSITPYYASLIDISNLKKDPIYK 89
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q + K+EL + E EDP+ ++ SP+ GI HRYPDR+L + C +YCR C R+ V
Sbjct: 90 QSVASKKELIMEDFEMEDPLAEDKDSPVIGITHRYPDRVLFYVNPNCAMYCRHCTRKRKV 149
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
S+ + S ++ + A+ YI+E ++ +V+ +GGDPL+LS L +L + I+HV+++
Sbjct: 150 -SESESNPSKEEIQKAIDYIKEHPEVRDVLLSGGDPLLLSDDYLDWILSEISSIEHVELI 208
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SRVP+V PQRI L+ LK+ P+++ H NH E ++ ++ A+ +L+NAGI +
Sbjct: 209 RIGSRVPVVLPQRITDNLVNILKKY-HPIWVNTHFNHVVEITDTSVEALDKLSNAGIPIG 267
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR +I +G +I+ SL
Sbjct: 268 NQTVLLSGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSISKGLEIIESLI 327
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GK+ + + + G+ + ++ ++ Y S+
Sbjct: 328 GHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGVITTYKEPSN 381
>gi|150020100|ref|YP_001305454.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
gi|149792621|gb|ABR30069.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
Length = 423
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 131/349 (37%), Positives = 209/349 (59%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ +T+ L + KE+ + I++ +A+TP A+L++P NP PI RQ +
Sbjct: 24 QIRNR-ITNVDTLKKVINLTKEEEEGIRQSLKTLRMAITPYYASLMDPDNPKCPIRRQAV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL + P + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Q
Sbjct: 83 PTVKELEVKPWDMIDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAG-Q 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +AA+ YI+E Q+ +V+ +GGD L+ L+ +LK LR IKHV+I+R
Sbjct: 142 HDRTRTKSEIDAAIDYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQ + EL LK+ P++I + NHP E + E+ A LA+AGI L +QS
Sbjct: 202 TRAPVVIPQIVTKELTNMLKKY-HPIWINMQFNHPKEITSESSKACEMLADAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND P I+ L+ V++R++PYY++ DL+ G SHFR +I G KI+ SL
Sbjct: 261 VLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGISHFRTSIGTGLKIMESLIGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG C P Y++D P G GK+++ + N + + ++ ++ Y
Sbjct: 321 SGFCVPTYVVDAPAGGGKIRLMPQYLISYSNNTAILRNYEGVIVAYHEP 369
>gi|15614818|ref|NP_243121.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125]
gi|10174874|dbj|BAB05974.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125]
Length = 468
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 201/350 (57%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + DL + +E+ + ++ + + +TP A+L+NP +P PI Q +
Sbjct: 31 QLTH-TIRTIDDLKQVINLTEEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSV 89
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 90 PISKEIEKTKYDMEDPLAEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 148
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+ YI + + +V+ +GGD L+++ + L+ +LK LR I HV+I+R
Sbjct: 149 IGMGVPKKQMDAAIDYIAQTPAVRDVLLSGGDGLLINDQILEYILKNLRAIPHVEIIRIG 208
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L LK+ PV++ H N E ++EA A +L +AG+ + +Q+
Sbjct: 209 TRAPVVFPQRITDHLCSILKKY-HPVWLNTHFNTSLEITKEAKEACEKLVDAGVPVGNQA 267
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V +R++PYY++ DL+ G SHFR I +G +I+ +L+
Sbjct: 268 VILAGINDSTHIMKKLMHDLVAIRVRPYYVYQCDLSEGISHFRAPISKGIEIMEALRGHT 327
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P +++D PGG GKV + + I + + ++ YP
Sbjct: 328 SGYAVPTFVVDAPGGGGKVTLQPNYILSQSPSKTVLRNFEGVISTYPEPD 377
>gi|154686384|ref|YP_001421545.1| hypothetical protein RBAM_019520 [Bacillus amyloliquefaciens FZB42]
gi|154352235|gb|ABS74314.1| KamA [Bacillus amyloliquefaciens FZB42]
Length = 473
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 206/351 (58%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q +
Sbjct: 32 QLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 150 IGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L + LK+ PV++ H N E +EE++AA +L NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIELTEESVAACEKLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P +++D PGG GK+ + + + I + ++ YP +
Sbjct: 329 TGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379
>gi|169828773|ref|YP_001698931.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41]
gi|168993261|gb|ACA40801.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41]
Length = 462
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 200/348 (57%), Gaps = 3/348 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + +E+ + +K + +TP A+L+NP + PI Q +
Sbjct: 33 QLTN-TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQSV 91
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ + EDP+ ++ SP+ GI HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 92 PLSAEIMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 150
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI+ +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R
Sbjct: 151 VGMAVPKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRIG 210
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI EL LK+ PV++ H N E ++EA A +L NAG+ + +QS
Sbjct: 211 TRAPVVFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQS 269
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ L+ V++R++PYY++ DL+ G SHFR I +G +I+ SL+
Sbjct: 270 VILTGINDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGHT 329
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SG P +++D P G GK+ + + I + ++ ++ YP
Sbjct: 330 SGYAVPTFVVDAPNGGGKIALQPNYIISQSPEKVVLRNYEGVISSYPE 377
>gi|325281770|ref|YP_004254312.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
gi|324313579|gb|ADY34132.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
Length = 416
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 207/350 (59%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + L + ++ + I+E +A+TP +LI+P NP PI +Q +
Sbjct: 23 QVKNR-IETLDQLKKYIRLTPDEEEGIRESLKTLRMAITPYYLSLIDPDNPYCPIRKQSV 81
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL+ P + EDP+ ++ SP+ G+ HRYPDR+L + +C +YCR C RR G
Sbjct: 82 PTIEELHRSPADLEDPLHEDGDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAGH- 140
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + YI Q+ +V+ +GGD L++S +RL+ ++K LR I HV+I+R
Sbjct: 141 HDCATPLERIDKCIEYIANTPQVRDVLLSGGDALLVSDERLEYIIKRLRGIPHVEIIRIG 200
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL+ L++ P+++ H NHP E +EE+ AA +RLA+AGI L +QS
Sbjct: 201 SRTPVVLPQRITPELVNMLRKY-HPIWLNTHFNHPNEITEESAAACARLADAGIPLGNQS 259
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+
Sbjct: 260 VLLRGINDCTHVMKKLVHELVKIRVRPYYIYICDLSVGIGHFRTPVSKGIEIIENLRGHT 319
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P +++D PGG GK+ + + G + + +V Y +
Sbjct: 320 SGYAVPTFVVDAPGGGGKIPVMPTYLISQGPNRVVLRNFEGVVTTYTEPT 369
>gi|328553134|gb|AEB23626.1| L-lysine 2,3-aminomutase [Bacillus amyloliquefaciens TA208]
gi|328912092|gb|AEB63688.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens LL3]
Length = 473
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 205/351 (58%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q +
Sbjct: 32 QLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 150 IGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L Q LK+ PV++ H N E +EE++ A +L NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P +++D PGG GK+ + + + I + ++ YP +
Sbjct: 329 TGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379
>gi|126652300|ref|ZP_01724476.1| KamA [Bacillus sp. B14905]
gi|126590875|gb|EAZ84988.1| KamA [Bacillus sp. B14905]
Length = 462
Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 200/348 (57%), Gaps = 3/348 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + +E+ + +K + +TP A+L+NP + PI Q +
Sbjct: 33 QLTN-TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQSV 91
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ + EDP+ ++ SP+ GI HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 92 PLSAEIMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 150
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI+ +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R
Sbjct: 151 VGMAVPKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRIG 210
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI EL LK+ PV++ H N E ++EA A +L NAG+ + +QS
Sbjct: 211 TRAPVVFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQS 269
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ L+ V++R++PYY++ DL+ G SHFR I +G +I+ SL+
Sbjct: 270 VILTGINDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGHT 329
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SG P +++D P G GK+ + + I + ++ ++ YP
Sbjct: 330 SGYAVPTFVVDAPNGGGKIALQPNYILSQSPEKVVLRNYEGVISSYPE 377
>gi|2529467|gb|AAB81159.1| YokS [Bacillus subtilis subsp. subtilis str. 168]
Length = 471
Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats.
Identities = 117/351 (33%), Positives = 205/351 (58%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q +
Sbjct: 32 QLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE++ + EDP+ ++ S + G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PLSEEMHKTKYDLEDPLHEDEDSRVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 150 IGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379
>gi|229030019|ref|ZP_04186084.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271]
gi|228731280|gb|EEL82197.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271]
Length = 478
Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +
Sbjct: 32 QLTN-TIKTLDDLKKVINLIPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 150 IGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+
Sbjct: 210 TRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 329 SGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|308173939|ref|YP_003920644.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7]
gi|307606803|emb|CBI43174.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7]
Length = 473
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 205/351 (58%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q +
Sbjct: 32 QLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQSV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 91 PLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-Q 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 150 IGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRIG 209
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R PIV PQRI L Q LK+ PV++ H N E +EE++ A +L NAG+ + +Q+
Sbjct: 210 TRAPIVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQA 268
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 269 VILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHT 328
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P +++D PGG GK+ + + + I + ++ YP +
Sbjct: 329 TGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379
>gi|134045706|ref|YP_001097192.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
gi|132663331|gb|ABO34977.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
Length = 433
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 125/353 (35%), Positives = 210/353 (59%), Gaps = 6/353 (1%)
Query: 2 QLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIAR 58
QL + ++ L + K + EI++ + +++TP A+LI+ N + DPI +
Sbjct: 31 QLSN-SIKDVDTLEKFLGINLDKHEKKEIQKAIEVFPMSITPYYASLIDTKNLDKDPIYK 89
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q + +EL + E EDP+ +++ SP+ GI HRYPDR+L + C +YCR C R+ V
Sbjct: 90 QSVASSKELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPNCAMYCRHCTRKRKV 149
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
S+K + S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV+++
Sbjct: 150 -SEKSSNPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELI 208
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SRVP+V PQRI L+ LK+ P++I H NHP E ++ + A+ +L+++GI L
Sbjct: 209 RIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVEITKASKVALDKLSDSGIPLG 267
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR ++ +G +I+ SL
Sbjct: 268 NQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESLI 327
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P Y++D PGG GK+ + + + G+ + ++ I+ Y S
Sbjct: 328 GHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITTYVEPS 380
>gi|332971462|gb|EGK10416.1| L-lysine 2,3-aminomutase [Desmospora sp. 8437]
Length = 435
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 198/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H T+ DL +K+ ++ + + +TP A ++ +P+ PI Q +
Sbjct: 25 QLTH-TIRKLDDLKQVINLKENEVGGVGISHQTIPLNITPYYALQMDTEDPSCPIRMQSV 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q
Sbjct: 84 PLSTELEQTKYDMEDPLLEDTDSPVPGLTHRYPDRVLFLITNQCSMYCRYCTRRRFSG-Q 142
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + K +A + YI+ Q+ +V+ +GGD L+++ + ++ +LK LR I HV+I+R
Sbjct: 143 IGMGVPKKQMDACIDYIRSNPQVRDVLLSGGDGLLVNDRIIEYLLKNLREIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI +L LK+ PV++ H NHP E + EA A LA+AG+ L +Q+
Sbjct: 203 TRAPVVFPQRITEDLCNILKKY-HPVWLNTHFNHPKEITPEAKRACEMLADAGVPLGNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+L GIND P I+ L V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VILAGINDCPHIMKKLNHELVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEYLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + + ++ YP +
Sbjct: 322 SGYAVPTFVVDAPGGGGKIPVAPNYVISQSSQKTVLRNFEGVITSYPEPRN 372
>gi|326203071|ref|ZP_08192937.1| lysine 2,3-aminomutase YodO family protein [Clostridium
papyrosolvens DSM 2782]
gi|325986717|gb|EGD47547.1| lysine 2,3-aminomutase YodO family protein [Clostridium
papyrosolvens DSM 2782]
Length = 425
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 130/349 (37%), Positives = 199/349 (57%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL ++ +T+ L + E+I I++ +A+TP L+NP +P PI +Q +
Sbjct: 25 QLANR-ITTITQLEQVVNLTVEEIRGIEKCLKKLRMAITPYYVTLMNPEDPACPIRKQAV 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I + DP+ + SP+ G+ HRYPDR LL + C +YCR C RR G+
Sbjct: 84 PTINETYISTCDSSDPLHEGIDSPVNGLTHRYPDRALLLVTDQCSMYCRHCTRRRFAGND 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
LS + A+ YI+ QI +VI +GGD L +S++RL+ +LK+L+ I HV+++R
Sbjct: 144 DKE-LSITNVNKAIEYIKNTKQIRDVILSGGDALCISNERLEYILKSLKAINHVEVIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+V PQRI PEL LK+ P++I NHP E + EAI A L++AGI L +QS
Sbjct: 203 TRVPVVMPQRITPELCNMLKKY-HPLWINTQFNHPNELTPEAIKACEMLSDAGIPLGNQS 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL IND P I+ NL++ V+ R++PYYL+ DL+ G HFR + G +I+ L+
Sbjct: 262 VLLSNINDCPYIMKNLVQGLVKSRVRPYYLYQCDLSEGIEHFRTPVTVGVEIIEMLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ ++ + N + + ++ Y
Sbjct: 322 SGFAVPTFVIDAPGGGGKIPVNPQYLLSQSNDKVILRNFEGVICSYTEP 370
>gi|91772337|ref|YP_565029.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
gi|91711352|gb|ABE51279.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
Length = 435
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 124/354 (35%), Positives = 199/354 (56%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
QL+H ++ + I + +++KE + +++TP +LI+ + NDPI
Sbjct: 30 QLKH-SIRDIETFERLLGINFEPPEKEKLKETLEKFPLSITPYYLSLIDSDDFRNDPIFL 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EEL I +E EDP+ ++ SP++GI HRYPDR+L + +VC +YCR C R+ V
Sbjct: 89 QSFPSPEELIISADELEDPLSEDTDSPVEGITHRYPDRVLFHISNVCSMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + + + YI+ QI +V+ +GGDPL+LS L +L + I HV+++
Sbjct: 149 G-DIDYIPEKEKILEGIEYIRNTPQIRDVLLSGGDPLMLSDDFLDWILTEINSIPHVEVI 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR+P+V P RI EL+ LK+ P+++ H NHP E + + A+ +LA+AGI L
Sbjct: 208 RIGSRMPVVLPYRITDELVDVLKKH-HPIWLNTHFNHPREMTFSSRQALKKLADAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND I+ L+ V+ R++PYYL+ DL+ G SHFR I +G +I+ +L
Sbjct: 267 NQTVLLAGVNDCQRIIKKLVHKLVQNRVRPYYLYQCDLSEGLSHFRTPIGKGIEIMENLI 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D P G GK+ + + I + ++ ++ Y S
Sbjct: 327 GHTSGFSVPTYVIDAPHGGGKIPVMPNYIISWSTNRVILRNYEGVITSYKEPES 380
>gi|223940704|ref|ZP_03632543.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514]
gi|223890631|gb|EEF57153.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514]
Length = 412
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 129/351 (36%), Positives = 205/351 (58%), Gaps = 4/351 (1%)
Query: 2 QLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +TS + L + E+ ++ ++A+TP NLI+P + N PI Q
Sbjct: 47 QLKNR-ITSLEQLQKLMPTLTPEEHAGTVLANSKLALAITPYFFNLIDPADENCPIRTQV 105
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+ +E + E +DP G+++HSP+ G+VHRYPDR+L + C YCR+C R +V +
Sbjct: 106 IPKVQETHTASWEMDDPCGEDSHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 165
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G + E + YI++ + +V+ +GGDPL+LS +L+ +L LR I HV+ LR
Sbjct: 166 AAGYDFHP-EFEKQIEYIRKTPTVRDVLLSGGDPLLLSDDKLEYLLSQLRAIPHVEFLRI 224
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R+PI PQRI P L LK+ P++I+IH NHP E + E A+ RLA AGI L +Q
Sbjct: 225 GTRIPIFLPQRITPALCAMLKKY-HPLFISIHTNHPRELTTEVREALGRLAEAGIPLGNQ 283
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+ +NDD + L++ + R+KPYYL+ DL AG++H R ++ +G +I+ L+
Sbjct: 284 SVLLRHVNDDLTTMRALVQKLLMCRVKPYYLYQCDLIAGSAHLRSSVRKGLEIMEGLRGH 343
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P Y++D PGG GKV ++ + I + + +YP +
Sbjct: 344 TTGYAIPQYVIDAPGGGGKVPVNPEYVLSRNADRVVIRNFEGKIFEYPEAA 394
>gi|45358424|ref|NP_987981.1| lysine 2,3-aminomutase [Methanococcus maripaludis S2]
gi|44921182|emb|CAF30417.1| Lysine 2,3-aminomutase [Methanococcus maripaludis S2]
Length = 433
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 127/353 (35%), Positives = 213/353 (60%), Gaps = 6/353 (1%)
Query: 2 QLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIAR 58
QL + ++ L N I +++ EI++ + + +++TP A+LI+ N DPI +
Sbjct: 31 QLSN-SIKDVDTLENFLGITFDEKEKTEIQKAIDVFPMSITPYYASLIDIKNLGKDPIYK 89
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q + +EL + E EDP+ ++ SP+ GI HRYPDR+L + C +YCR C R+ V
Sbjct: 90 QSVASSKELILENFEMEDPLSEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRKV 149
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
S+K + S ++ + A+ YI+ ++I +V+ +GGDPL+LS + L +L + IKHV+++
Sbjct: 150 -SEKSSNPSKEEIQKAIDYIKNNNKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELI 208
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SRVP+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+++GI L
Sbjct: 209 RIGSRVPVVLPQRITDNLVNVLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPLG 267
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR ++ +G +I+ SL
Sbjct: 268 NQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESLI 327
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P Y++D PGG GK+ + + + G+ + ++ I+ Y S
Sbjct: 328 GHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITSYVEPS 380
>gi|218961635|ref|YP_001741410.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas
acidaminovorans]
gi|167730292|emb|CAO81204.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas
acidaminovorans]
Length = 415
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 209/349 (59%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ +T+ L ++ E+ K+ + + +A+TP +LI+ NP DPI Q I
Sbjct: 22 QIKNR-ITTHAQLSKYIELQPEEEAVFKDKAFSFRMAITPHYLSLIDHSNPYDPIRLQAI 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ E +I P + DP+ ++ +P+ G+ HRYPDR+LL L C +YCR C RR G +
Sbjct: 81 PRIAESHISPSDMADPLSEDADAPVPGMTHRYPDRVLLLLTDQCAMYCRHCTRRRKAG-E 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ ++ E AL YI+E ++ +VI +GGDPL LS +RL +L L I+H++I+R
Sbjct: 140 HDAPMPKENVEKALEYIKEHKEVRDVILSGGDPLTLSDERLDDILNRLSKIEHIEIVRLG 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQR L+ L++ K V++ H NHP E E++ A++++A GI + +QS
Sbjct: 200 TRTPVVLPQRFTDSLLNILQKY-KFVWLNTHYNHPNELCEDSCKALAKIAETGIPMGNQS 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND+ +++ L+ V+ R++PYY++ DL+ G SHFR I +G +I+ SL+
Sbjct: 259 VLLKGVNDNVDVMKALVHKLVKNRVRPYYIYQCDLSEGISHFRTPIAKGIEIMESLRGHT 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGLC P Y++D PGG GK+ + + + G + ++ + Y
Sbjct: 319 SGLCVPTYVVDAPGGGGKIPVMPNYVISQMPGRVILRNYEGFITAYTEP 367
>gi|294055535|ref|YP_003549193.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita
akajimensis DSM 45221]
gi|293614868|gb|ADE55023.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita
akajimensis DSM 45221]
Length = 397
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 129/347 (37%), Positives = 209/347 (60%), Gaps = 3/347 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ +T + L + ++ + ++A+TP NLINP +PNDPI RQ I
Sbjct: 31 QLKNR-ITRLEQLEQYLDLSPDERAGCLFANKKLALAITPYFFNLINPKDPNDPIRRQVI 89
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ E I P+E DP+G+ P+ GIVHRYPDR+L + C YCR+C R +V +
Sbjct: 90 PRAAESQIAPDEMLDPVGEEGTKPVDGIVHRYPDRVLFLVTDRCAAYCRYCTRSRLVSNA 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + E+ L YI++ S+I +V+ +GGDPL+LS K+L +L LR I HV+ +R
Sbjct: 150 QDYNFHP-EFESGLEYIRQHSEIRDVLLSGGDPLLLSDKKLDYLLGELRKIPHVEFIRIG 208
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+ PQRI P+L ++ G P++++IH NHP E S E AA RL+ AG+ + +QS
Sbjct: 209 SRIPVFLPQRITPQLCDIFRKHG-PIWLSIHVNHPSECSLELKAACERLSYAGVPIGNQS 267
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+N+D ++ +L+ + +R++PYYL+ DL G++H R EG +I+ L+
Sbjct: 268 VLLKGVNNDAGVMKSLIHRLLMMRVRPYYLYQCDLITGSAHLRTDPREGIEIIRQLRGHT 327
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GK+ ++ ++ + + + + ++YP
Sbjct: 328 SGYSIPQFVIDAPGGGGKIPLNPDYVEDISETTLILRNFQGERYEYP 374
>gi|254445491|ref|ZP_05058967.1| KamA family protein [Verrucomicrobiae bacterium DG1235]
gi|198259799|gb|EDY84107.1| KamA family protein [Verrucomicrobiae bacterium DG1235]
Length = 398
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 129/350 (36%), Positives = 214/350 (61%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ +T+ + L + E+ + ++A+TP NLI+ +PN PI +Q I
Sbjct: 31 QLKNR-ITTLEQLEQHMELTPEERAGCAHANTKLAMAITPYFFNLIDREDPNCPIRKQVI 89
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+++E+ + EE DP+G++ HSP+ G+VHRYPDR+L + C YCR+C R +V +
Sbjct: 90 PREDEMTVGQEEMLDPVGEDGHSPVPGLVHRYPDRVLFLVTDRCAAYCRYCTRSRLVSNA 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + E L YI+E ++ +V+ +GGDPL+LS K+L +L LR I+HV+ +R
Sbjct: 150 QDYNFHP-EFEQGLKYIEEHPEVRDVLLSGGDPLLLSDKKLDYLLGRLRAIEHVEFIRIG 208
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+ PQRI PEL + K+ G P++++IH NHP E ++ A RL+ AG+ L +QS
Sbjct: 209 SRIPVFLPQRITPELCEIFKKHG-PIWMSIHTNHPKECTQTLKDACERLSFAGVPLGNQS 267
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +NDD E++ L+ V +R++PYY++ DL G++H R + +G +I+ L+
Sbjct: 268 VLLKDVNDDLEVMKALVHRLVRMRVRPYYIYQCDLITGSAHLRANVCKGIEIMKGLRGHT 327
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P +++D PGG GKV I+ I K+ + + + ++ YP K+
Sbjct: 328 TGYSVPQFVIDAPGGGGKVPINPQYITKIDDEAIHFKNFEGKLYRYPLKT 377
>gi|197121711|ref|YP_002133662.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
gi|196171560|gb|ACG72533.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
Length = 415
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 125/349 (35%), Positives = 193/349 (55%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R + + + L + E+ + + + + +TP A L++P +P PI Q +
Sbjct: 70 QQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSV 128
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ELNIL + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V
Sbjct: 129 PTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSDP 188
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + E +LAYI + ++I +V+ +GGDPL LS RL +L LR I HV+I R
Sbjct: 189 T-SAAAKRQIEESLAYIAQHTEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRLG 247
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q
Sbjct: 248 TRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQM 306
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDDP ++ L + +RI+PYY++ DLA G SHFR +E G +I+ +L+
Sbjct: 307 VLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHT 366
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P +++D P G GK+ ++ + + + + +Y
Sbjct: 367 SGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGKQFEYVEP 415
>gi|73748139|ref|YP_307378.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
gi|73659855|emb|CAI82462.1| L-lysine 2,3-aminomutase homologe, probable frameshift
[Dehalococcoides sp. CBDB1]
Length = 708
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 122/343 (35%), Positives = 197/343 (57%), Gaps = 4/343 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
+ LT+ + L E+ +++ + +++TP +LI+ N NDP+ Q +P
Sbjct: 26 RDLTTVEKLLGV-KFSAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVFIQSVPSA 84
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG
Sbjct: 85 AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVG-DIDK 143
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ++R +RV
Sbjct: 144 NLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 203
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L +Q+VLL
Sbjct: 204 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPLGNQTVLL 262
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L SG
Sbjct: 263 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 322
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y++D P G GK+ I + + + + ++ I+ Y
Sbjct: 323 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAY 365
>gi|51891173|ref|YP_073864.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863]
gi|51854862|dbj|BAD39020.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863]
Length = 448
Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats.
Identities = 128/347 (36%), Positives = 213/347 (61%), Gaps = 5/347 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ H+ +T+ + L + +E+ I++ + + + +TP A LI+P +P+ P+ Q +
Sbjct: 30 QVSHR-ITNLEQLKQVVNLTEEEEAAIRDSQHLFRLGITPHYATLIDPDDPHCPMRLQAV 88
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ EL E DP+ ++ SP+ GI HRYPDR+L + H C +YCR C RR +VG Q
Sbjct: 89 PKYAELAWADYEMGDPLHEDVDSPVPGITHRYPDRVLFLITHECSLYCRHCTRRRIVGDQ 148
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ +S+ + A+AYI+ +I +V+ +GGDPL + +RL+ V+K LR I HV+I+R
Sbjct: 149 E--AMSTAMLDQAIAYIRAHPEIRDVLISGGDPLAVPDRRLEYVIKKLRAIPHVEIIRIG 206
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQ 240
+R+P+V PQRI PEL+ L++ P+++ H NHP+E +A A+ RLA+AGI +Q
Sbjct: 207 TRMPVVLPQRITPELVNMLRQY-HPIWLNTHFNHPFEVQHPKAREAMERLADAGIPTGNQ 265
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKG+ND ++ L+ V++R +PYY+++ DL+ G SHFR ++ +G I+ +L+
Sbjct: 266 SVLLKGVNDCAVVMRRLVHELVKVRCRPYYIYNCDLSEGLSHFRTSVAKGVAIIEALRGH 325
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK+ + + +G + + + Y
Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVMPQYLISQSDGRVILRNFEGKISIY 372
>gi|57234982|ref|YP_180969.1| GNAT family L-lysine 2,3-aminomutase/acetyltransferase
[Dehalococcoides ethenogenes 195]
gi|57225430|gb|AAW40487.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
[Dehalococcoides ethenogenes 195]
Length = 708
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 125/346 (36%), Positives = 198/346 (57%), Gaps = 5/346 (1%)
Query: 5 HKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFI 61
T+ + + E+ +++ ++ +++TP +LI+P N NDP+ Q +
Sbjct: 22 SHTIKDLATVEKLLGVKFSVEKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVFIQSV 81
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG
Sbjct: 82 PSAAELNFSCHDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVG-D 140
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
LS D L YI+ Q+ +V+ +GGDPL+LS L+ +L L+ I HVQ++R
Sbjct: 141 VDKTLSRDDLVKGLEYIKNTPQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQVIRIG 200
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+V PQRI P L++ +K+ PV++ H NHP E + +I A+ LA+AGI L +Q+
Sbjct: 201 TRVPVVLPQRITPHLVKIIKKY-HPVWVNTHFNHPREITATSIRALRLLADAGIPLGNQT 259
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L
Sbjct: 260 VLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHT 319
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D P G GK+ I + + + + ++ I+ Y
Sbjct: 320 SGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAY 365
>gi|220916508|ref|YP_002491812.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954362|gb|ACL64746.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 415
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 125/349 (35%), Positives = 193/349 (55%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R + + + L + E+ + + + + +TP A L++P +P PI Q +
Sbjct: 70 QQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSV 128
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ELNIL + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V
Sbjct: 129 PTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSDP 188
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + E +LAYI + ++I +V+ +GGDPL LS RL +L LR I HV+I R
Sbjct: 189 T-SAAAKRQIEESLAYIAQHTEIRDVVISGGDPLSLSDDRLDHILGRLRAIPHVEIFRLG 247
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q
Sbjct: 248 TRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQM 306
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDDP ++ L + +RI+PYY++ DLA G SHFR +E G +I+ +L+
Sbjct: 307 VLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHT 366
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P +++D P G GK+ ++ + + + + +Y
Sbjct: 367 SGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGKQFEYVEP 415
>gi|256828026|ref|YP_003156754.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
gi|256577202|gb|ACU88338.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
Length = 437
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 120/353 (33%), Positives = 204/353 (57%), Gaps = 6/353 (1%)
Query: 2 QLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
+R+ ++ S + + I +++ ++ + + +A+TP +LI+P + NDP+
Sbjct: 30 HVRN-SIKSIEGVERLLGIEFTEKERKALRNTTEKFPMAITPYYLSLIDPSDYRNDPVFM 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P +EL I + DP+ ++ SP+ G+ HRYPDR+LL + + C +YCR C R+ V
Sbjct: 89 QAFPSTDELRIESHDMSDPLHEDEDSPVPGLTHRYPDRVLLHVSNTCAMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + ++ S +D + YI+ Q+ +V+ +GGDP +LS L +L + I+HV+++
Sbjct: 149 G-DRDSIPSREDLRQGIEYIRNTPQVRDVLLSGGDPFLLSDDMLDWLLTEIGGIEHVEVV 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V P RI EL++ LK+ P++I H NHP E + + A+++LANAGI L
Sbjct: 208 RIGTRTPVVLPYRITDELVEMLKKH-HPLWINTHFNHPAEITASSKQALAKLANAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND P ++ L V R++PYYL+ DL+ G +HFR I +G +I+ SL+
Sbjct: 267 NQSVLLAGVNDCPRLIKVLNHKLVRNRVRPYYLYQCDLSEGLTHFRTPIGKGIEILESLR 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P Y++D PGG GK+ + + I + ++ ++ Y +
Sbjct: 327 GHTSGFSIPTYVVDAPGGGGKIPLMPNYIISWTANKVVLRNYEGVITTYHEPA 379
>gi|147668784|ref|YP_001213602.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
gi|146269732|gb|ABQ16724.1| beta-lysine acetyltransferase / L-lysine 2,3-aminomutase
[Dehalococcoides sp. BAV1]
Length = 730
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 122/343 (35%), Positives = 197/343 (57%), Gaps = 4/343 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
+ LT+ + L E+ +++ + +++TP +LI+ N NDP+ Q +P
Sbjct: 48 RDLTTVEKLLGV-KFSAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVFIQSVPSA 106
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG
Sbjct: 107 AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVG-DIDK 165
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ++R +RV
Sbjct: 166 NLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 225
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L +Q+VLL
Sbjct: 226 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITATSSRALGMLADAGIPLGNQTVLL 284
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L SG
Sbjct: 285 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 344
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y++D P G GK+ I + + + + ++ I+ Y
Sbjct: 345 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAY 387
>gi|270307638|ref|YP_003329696.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family
[Dehalococcoides sp. VS]
gi|270153530|gb|ACZ61368.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family
[Dehalococcoides sp. VS]
Length = 730
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 126/346 (36%), Positives = 198/346 (57%), Gaps = 5/346 (1%)
Query: 5 HKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFI 61
T+ + + E+ +++ ++ +++TP +LI+P N NDP+ Q +
Sbjct: 44 SHTIKDLATVEKLLGVKFSAEKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVFIQSV 103
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG
Sbjct: 104 PSAAELNFSCHDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVG-D 162
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
LS D L YI+ Q+ +V+ +GGDPL+LS L+ +L L+ I HVQ++R
Sbjct: 163 VDKTLSRDDLVKGLEYIKNTPQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQVIRIG 222
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+V PQRI P L++ +K+ PV+I H NHP E + +I A+ LA+AGI L +Q+
Sbjct: 223 TRVPVVLPQRITPHLVKIIKKY-HPVWINTHFNHPREITATSIRALRLLADAGIPLGNQT 281
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L
Sbjct: 282 VLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHT 341
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D P G GK+ I + + + + ++ I+ Y
Sbjct: 342 SGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAY 387
>gi|289432216|ref|YP_003462089.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
gi|288945936|gb|ADC73633.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
Length = 730
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 122/343 (35%), Positives = 197/343 (57%), Gaps = 4/343 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
+ LT+ + L E+ +++ + +++TP +LI+ N NDP+ Q +P
Sbjct: 48 RDLTTVEKLLGV-KFSAEKRRSLEDTILKFPMSITPYYFSLIDRKNYENDPVFIQSVPSA 106
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG
Sbjct: 107 AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVG-DIDK 165
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ++R +RV
Sbjct: 166 NLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 225
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L +Q+VLL
Sbjct: 226 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPLGNQTVLL 284
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L SG
Sbjct: 285 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 344
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y++D P G GK+ I + + + + ++ I+ Y
Sbjct: 345 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAY 387
>gi|309389800|gb|ADO77680.1| L-lysine 2,3-aminomutase [Halanaerobium praevalens DSM 2228]
Length = 419
Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 118/349 (33%), Positives = 209/349 (59%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ +T +++L + + +EI+E+ + + +TP A L++ + N P+ Q +
Sbjct: 29 QVKNR-VTDSEELAKLINLDDGEKEEIEEVLEKFRMGITPYYATLMDADDHNCPVRMQAV 87
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ++ + EDP+ ++ SP+ GI HRYPDR+L + C +YCR C RR G Q
Sbjct: 88 PDIMETHLSGSDMEDPLHEDGDSPVDGITHRYPDRVLFLITDQCSMYCRHCTRRRFAG-Q 146
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + + L Y++ Q+ +V+ +GGD L++S +L+ ++K L I HV+++R
Sbjct: 147 NDSGVPMERIDKCLEYVRNTPQVRDVLLSGGDCLLISDDKLEYIIKELSEIDHVEVIRLG 206
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI +L+ LK+ P+++ H NHP E ++EA A ++LANAGI L +QS
Sbjct: 207 SRTPVVMPQRITDDLVNMLKKY-HPIWLNTHFNHPKEITKEAAEACAKLANAGIPLGNQS 265
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VL++GIND E++ +L++ V++R++PYY++ DL+ G HFR + +G +I+ SL+
Sbjct: 266 VLMRGINDSSEVMMDLVQKLVQIRVRPYYIYQCDLSMGIEHFRTKVSKGLEIMESLRGHT 325
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG C P Y++D PGG GK + + + + ++ ++ Y
Sbjct: 326 SGYCVPTYVIDAPGGGGKTPVMPQYLISMSPTKVVLRNYEGVITTYTEP 374
>gi|312881010|ref|ZP_07740810.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260]
gi|310784301|gb|EFQ24699.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260]
Length = 422
Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 199/350 (56%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ +T+ + L + + EI+E +A+TP A+LI+P +P DP+ RQ +
Sbjct: 24 QVANR-ITTVEVLRRVIPLSDPEAREIQESLGALRMAITPYYASLIDPKDPEDPVRRQAV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ++ + DP+ ++ SP+ G+ HRYPDR +L L C +YCR C RR G +
Sbjct: 83 PSILETHVAETDLRDPLHEDVDSPVPGLTHRYPDRGILLLTDQCSMYCRHCTRRRKAG-E 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S AAL YI+ +V+FTGGDP ++ L VL + I HV+I+RF
Sbjct: 142 TDHAYSRDRIAAALDYIRRTPTFRDVLFTGGDPFLVDDGTLDWVLTEVGSIPHVEIVRFG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI +L LK PV++ H NHP E + ++ AA ++LANAGI L +QS
Sbjct: 202 TRTPVVMPQRITDDLCALLKRH-HPVWVNTHFNHPREITPQSRAACAKLANAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND P + L + + LR++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 VLLKGVNDCPYVFRELNQQLLTLRVRPYYIYQCDLSQGIEHFRTPVAKGLEIMEYLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG+ P +I+D PGG GK+ + + + + + + ++ + Y +
Sbjct: 321 SGMAVPTFIVDAPGGGGKIPLLPNYLVSMSDKRVVLRNYEGVFSTYAEPA 370
>gi|225163783|ref|ZP_03726082.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2]
gi|224801613|gb|EEG19910.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2]
Length = 391
Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 134/351 (38%), Positives = 214/351 (60%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLR++ LT +DL + ++ + N S+A+TP NLI+ NP DP+ Q I
Sbjct: 31 QLRNR-LTRLEDLERYMTLTPDERAGVLFAGNKLSLAITPYFFNLIDRDNPADPLRLQVI 89
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ E + EE D +G++ HSP+ G+VHRYPDR+L + C YCR+C R +V +
Sbjct: 90 PRAGESQLHAEEMLDSLGEDEHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSNA 149
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + E L YI+ S++ +V+ +GGDPL+LS ++L +L LR I HV+ +R
Sbjct: 150 QDYNFHP-EYEQGLRYIESHSEVRDVLLSGGDPLLLSDRKLDHLLGRLRAIPHVEFIRIG 208
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+ PQRI PEL + K+ G P++++IH NHP+E +EE AA RL+ AG+ L +QS
Sbjct: 209 SRIPVFMPQRITPELCEVFKKHG-PIWMSIHVNHPHECTEELRAACERLSYAGVPLGNQS 267
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+NDDP+ + L+ + +R++PYYL+ DL G SHF++ + G +I+ +L+
Sbjct: 268 VLLRGVNDDPDTMRALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRRGLEIIKNLRGHT 327
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GKV ++ ++K+ + ++ + YP S+
Sbjct: 328 TGYAIPQYVIDAPGGGGKVPMNPDYVEKITDDEVIFRNYEGHTYRYPLTST 378
>gi|158521904|ref|YP_001529774.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
gi|158510730|gb|ABW67697.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
Length = 454
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 125/349 (35%), Positives = 198/349 (56%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + + L + E++ E+ + +TP +L++ P P+ R +
Sbjct: 91 QLQNR-ICTPTALSRFLDLSLEEMGVFAELKTKLPLGVTPYYMSLLHGSAPGHPLRRTVV 149
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E LP E DP+G+ H+ + G+VHRYPDR+LL + C YCR+C R +VG
Sbjct: 150 PTVHEFFKLPGEENDPLGEEGHTQMPGLVHRYPDRVLLLVSGFCSTYCRYCTRSRLVGR- 208
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S E A+ YI+ I +V+ +GGDPL LS +L +L +R I HV+I+R
Sbjct: 209 GKIYPSRSRLEKAIDYIRNTPTIRDVLLSGGDPLTLSDAKLDWILGRIREIPHVEIIRIG 268
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
++VP V PQR+ PEL++ L++ P+++++H HP E + EA A + LA+AGI L SQ+
Sbjct: 269 TKVPAVLPQRVTPELVRVLRKY-HPLWMSLHFTHPEECTPEAYDACAMLADAGIPLGSQT 327
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGINDD + LM + +R+KPYYL+ D AG+ HFR ++ G +I+ L+
Sbjct: 328 VLLKGINDDVATMKALMHQMMRMRVKPYYLYQCDPVAGSGHFRTSVARGLEIIRGLRGHT 387
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ + + + + + ++ N + YP
Sbjct: 388 SGYAVPTYVIDAPGGGGKIPLLPNYVVSSSDAGVVLENYENRLFTYPNP 436
>gi|302341654|ref|YP_003806183.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii
DSM 2075]
gi|301638267|gb|ADK83589.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii
DSM 2075]
Length = 430
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 129/348 (37%), Positives = 204/348 (58%), Gaps = 3/348 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ LT+ Q L + +E+ + ++ +A+TP +LI+ NP DP+ R +
Sbjct: 76 QVRNR-LTNPQALERFFPLAQEERRAFEAVAGRLPMAITPYYLSLIDRQNPADPLRRAVV 134
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + P E DP+ ++ G+VHRYPDR+LL C YCR+C R +VG
Sbjct: 135 PTWMEAVVSPGESHDPLAEDADMAAPGLVHRYPDRVLLLATGFCSTYCRYCTRSRLVGG- 193
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + E ALAYI+ + +V+ +GGDPL ++ RL+ +L LR ++HV+I+R
Sbjct: 194 GGMHTGKRALERALAYIEATPAVRDVLISGGDPLTMADDRLEWLLSRLRAMRHVEIIRIG 253
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
S+VP V PQR+ P L + LK+ P++I++H HP E + EA A +RLA+AG+ L SQ+
Sbjct: 254 SKVPAVLPQRVTPALTRMLKKY-HPLFISLHFMHPAELTVEAAKACARLADAGVPLGSQT 312
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GINDD + LM+ + LR++PYYL+ D G++HFR + +G +IVA L+
Sbjct: 313 VLLAGINDDVATMRALMQGLLRLRVRPYYLYQCDPICGSAHFRTPVAKGLEIVAGLRGHT 372
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
+G P Y++D PGG GKV + ++ + + + ++ + YP
Sbjct: 373 TGYAVPTYVIDAPGGGGKVALYPESVIGRQDEALLLRNYEGGQYAYPD 420
>gi|224170200|ref|XP_002339353.1| predicted protein [Populus trichocarpa]
gi|222874958|gb|EEF12089.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 123/352 (34%), Positives = 208/352 (59%), Gaps = 6/352 (1%)
Query: 2 QLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
QL+H + + + + L ++ ++ + +++TP +LIN + NDP+ +
Sbjct: 13 QLKHSIQDIDTVETLLG-IRFDPKKRKALEMTVKKFPLSITPYYLSLINTDDHENDPVFK 71
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EL I + DP+ ++ SP+ G+ HRYPDR+LL++ +VC +YCR C R+ V
Sbjct: 72 QAFPCSRELEIEKHDMADPLSEDKDSPVPGVTHRYPDRVLLQVSNVCSMYCRHCTRKRKV 131
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + ++ +D + Y+++ +I +V+ +GGDPL+LS L +L +R I HVQ++
Sbjct: 132 G-DRDSIPGREDILKGIDYVRQHPEIRDVLLSGGDPLMLSDDYLDWILTEVRRIPHVQVI 190
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R+P+V P RI PEL++ LK+ +P+++ H NHP E + A A+ LA+AGI L
Sbjct: 191 RIGTRMPVVLPYRITPELVERLKKH-QPLWLNTHFNHPREINASAKEALRLLADAGIPLG 249
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND I+ +L+ VE R++PYYL+ DLA G SHFR + +G +I+ SL+
Sbjct: 250 NQSVLLAGVNDCQRIMKSLVHKLVENRVRPYYLYQCDLAEGLSHFRTPVGKGIEIMESLR 309
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ ++ + + + + ++ ++ Y
Sbjct: 310 GHTSGFAVPTYVIDAPGGGGKIPMNPNYLISLSTNKVVLRNYEGVITTYQEP 361
>gi|189218034|ref|YP_001938676.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4]
gi|189184892|gb|ACD82077.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4]
Length = 397
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 132/348 (37%), Positives = 203/348 (58%), Gaps = 4/348 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ L S + + + ++ + + +LTP NLI+P NP+ P+ RQ
Sbjct: 30 QLKNR-LNSLEQIEQRLFLIPDERRGLMFAAKEKLAFSLTPYFFNLIDPFNPDCPLRRQV 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+ EEL +P E DP G++ G+VHRYPDR+L + C YCR+C R +V
Sbjct: 89 IPRAEELVSMPYEMMDPCGEDKDMVAPGLVHRYPDRVLFLVTDRCATYCRYCTRSRIVSG 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
L D + Y+++ ++I +V+ +GGDPL+LS RL+K+L+ LR I H++I+R
Sbjct: 149 VGSQKLEIDD-KLTFDYLKKHTEIRDVLISGGDPLLLSDGRLEKILRQLREIAHIEIIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVPI PQRI L + LK P++I IH+NHP E + EA A+ +LA+ GI L +Q
Sbjct: 208 GTRVPIFLPQRITESLCKVLKAY-HPLWINIHSNHPKELTLEAKTALEKLADTGIPLGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGINDDP+ + L+ V R++PYYL+ DL GT HFR+ I G +I+ L+
Sbjct: 267 SVLLKGINDDPQTMLELVNKLVRCRVRPYYLYQCDLIQGTHHFRVPIRRGLEIMQKLRGF 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+G P Y++D PGG GK+ ++ + + ++ ++ YP
Sbjct: 327 TTGFAVPQYVVDGPGGGGKIPLNPDYVMGYYEDKVLLRNYEGKIYSYP 374
>gi|85860656|ref|YP_462858.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
gi|85723747|gb|ABC78690.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
Length = 486
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 125/354 (35%), Positives = 205/354 (57%), Gaps = 6/354 (1%)
Query: 2 QLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
QLRH K L + + L + + + + K I + +++TP +LI+ + NDP+ +
Sbjct: 81 QLRHCIKDLDTFETLLD-IRLPETLRRQFKLIVEKFPMSITPYYLSLIDTEDLENDPVFK 139
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EL++ + DP+ ++ SP+ G+ HRYPDR+LL + + C +YCR C R+ V
Sbjct: 140 QSFPAINELDVQSTDMSDPLHEDRDSPVPGLTHRYPDRVLLLISNTCAMYCRHCTRKRRV 199
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + T+ S + + YI++ Q+ +V+ +GGDP +LS L +L L+ I+HV+++
Sbjct: 200 G-DRDTIPSREQIMKGIEYIRDTPQVRDVLLSGGDPFLLSTDYLDWILIELKKIEHVEVI 258
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P V P RI EL++ LK+ P++I H NHP E + + AA+ +LA+AGI L
Sbjct: 259 RIGTRTPAVLPYRITDELVEMLKKH-HPLWINTHFNHPRELTASSRAALRKLADAGIPLG 317
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND P I+ +L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 318 NQSVLLSGVNDCPRIMRSLVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESLI 377
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG C P Y++D P G GK+ + + + + ++ ++ Y S
Sbjct: 378 GHTSGFCVPTYVIDAPAGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 431
>gi|307353610|ref|YP_003894661.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
gi|307156843|gb|ADN36223.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
Length = 437
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 121/354 (34%), Positives = 193/354 (54%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
QL H T+ E+ +E+KE + +A+TP +LI + NDPI
Sbjct: 30 QLSH-TIRDLDTFEKITGITFTNEKYEELKETLEKFPLAITPYYLSLIETEDYENDPIFM 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EL+I+ E+ DP+ ++ SP++GI HRYPDR+L + + C +YCR C R+ V
Sbjct: 89 QSFPSVHELDIIEEDLADPLDEDRDSPVEGITHRYPDRVLFLVSNKCAMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + + YI Q+ +V+ +GGDPL+L L+ +L L I HV+I+
Sbjct: 149 G-DVEYIPDKDQISKGIDYINNNPQVRDVLLSGGDPLLLDDSYLEWILSELTEIPHVEIV 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR+P+V P RI+ L++ L++ P++ NHP E + + A+ +LA+ GI L
Sbjct: 208 RIGSRLPVVLPYRIDSNLVEMLRQY-HPIWFNTQFNHPREITSSSTEALRKLADGGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND P I+ LM V R++PYY++ DL+ G SHFR + +G +I+ SL+
Sbjct: 267 NQSVLLSGVNDCPRIMKTLMHKLVMNRVRPYYMYQCDLSEGLSHFRTPVGKGIEIIESLR 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + + ++ ++ Y +
Sbjct: 327 GHTSGFAVPTYVIDAPGGGGKIPLMPNYLISWSTNKVVLRNYEGVICTYKEPDN 380
>gi|78187430|ref|YP_375473.1| hypothetical protein Plut_1576 [Chlorobium luteolum DSM 273]
gi|78167332|gb|ABB24430.1| L-lysine 2,3-aminomutase [Chlorobium luteolum DSM 273]
Length = 438
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 123/354 (34%), Positives = 201/354 (56%), Gaps = 6/354 (1%)
Query: 2 QLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q+RH +TL++ + L + EQ + + +++TP +LIN + NDP+
Sbjct: 29 QMRHSVRTLSAFESLLG-ITLSDEQRKAFGQTVAKFPMSITPYYLSLINTRDMANDPVFL 87
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+ V
Sbjct: 88 QSVPSPRELEIMTGDMADPLHEDADSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRKV 147
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + T+ + YI+ Q+ +V+ +GGDP +LS L +L L+ I+HV+++
Sbjct: 148 G-DRDTIPGRSAISEGIDYIRRTPQVRDVLLSGGDPFLLSDDYLDWILGELQAIEHVEVI 206
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V PQRI P L+ LK+ +PV++ H NHP E ++ + A++ LA+ G+ L
Sbjct: 207 RIGTRTPVVLPQRITPALVAVLKKH-QPVWVNTHFNHPREITQSSRNALALLADGGLPLG 265
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 266 NQTVLLSGINDCPRIMKALVHKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESLI 325
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 326 GHTSGFSVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379
>gi|118579512|ref|YP_900762.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus
DSM 2379]
gi|118502222|gb|ABK98704.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379]
Length = 440
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 130/352 (36%), Positives = 201/352 (57%), Gaps = 6/352 (1%)
Query: 2 QLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIAR 58
QLRH + I E+ E++E + + +++TP +LI+ N DP+ R
Sbjct: 30 QLRH-AIRDIATFERLLGIKFDAERKRELEETIDKFPLSITPYYLSLIDRTNYAVDPVFR 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P +EL + E EDP+ ++ SP+ GI HRYPDR+L ++ ++C +YCR C R+ V
Sbjct: 89 QAFPSPDELQVTSCEHEDPLHEDADSPVPGITHRYPDRVLFQVSNICSMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G ++ + L YI+ + +V+ +GGDPL+L L +L+ LR I HVQ++
Sbjct: 149 G-DVDSIPGKDEIMLGLEYIRRTPVVRDVLLSGGDPLMLPDSHLDWILRELRAIPHVQVI 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR+P+V P RI P LI+ L P+++ H NHP E + A A+SRLANAGI L
Sbjct: 208 RIGSRMPVVLPYRITPGLIRVLSRY-HPLWLNTHFNHPREITTSAREALSRLANAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND P I+ LM+ VE R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 267 NQTVLLAGVNDCPMIIKTLMQRLVENRVRPYYLYQCDLSEGLSHFRTPVGKGMEIMESLV 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 327 GHTSGFAVPTYVIDAPGGGGKIPVMPNYLITLATNKVVLRNYEGVITTYQEP 378
>gi|153004182|ref|YP_001378507.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
gi|152027755|gb|ABS25523.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
Length = 413
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 125/349 (35%), Positives = 195/349 (55%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R + +T L + ++ + E + + +TP A L++P +P+ PI Q +
Sbjct: 68 QQRER-VTRLDQLEKVIHLTADERRAVIESDAEFHMGITPYYAALMDPDDPSCPIRLQSV 126
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL I P + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V
Sbjct: 127 PTMGELTIAPADLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSDP 186
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + E +LAYI +I +V+ +GGDPL LS +RL +L LR I HV+I R
Sbjct: 187 T-SAAAKRQIEESLAYISAHPEIRDVVISGGDPLSLSDERLDYILGRLRAIPHVEIFRLG 245
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q
Sbjct: 246 TRNLVTLPQRVTDDFVHMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQM 304
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND+PE++ L + +RI+PYY++ DLA G SHFR +E G +I+ L+
Sbjct: 305 VLLKGVNDEPELVKELNHKLLLMRIRPYYIYQCDLAKGISHFRTPVETGIRIIEHLRGHT 364
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P +++D P G GK+ ++ + + + + ++ ++Y
Sbjct: 365 SGLAVPHFVVDAPQGGGKIPVNPNYVVSHEGKRWVLRNYAGKEYEYLEP 413
>gi|86158970|ref|YP_465755.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775481|gb|ABC82318.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 375
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 125/349 (35%), Positives = 192/349 (55%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R + + + L + E+ + + + + +TP A L++P +P PI Q +
Sbjct: 30 QQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSV 88
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ELNIL + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V
Sbjct: 89 PTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSDP 148
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + E +LAYI + +I +V+ +GGDPL LS RL +L LR I HV+I R
Sbjct: 149 T-SAAAKRQIEESLAYIAQHPEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRLG 207
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q
Sbjct: 208 TRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQM 266
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDDP ++ L + +RI+PYY++ DLA G SHFR +E G +I+ +L+
Sbjct: 267 VLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHT 326
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P +++D P G GK+ ++ + + + + +Y
Sbjct: 327 SGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGERFEYVEP 375
>gi|302340456|ref|YP_003805662.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
gi|301637641|gb|ADK83068.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
Length = 436
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 120/352 (34%), Positives = 202/352 (57%), Gaps = 6/352 (1%)
Query: 2 QLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
QL+H ++++S + L K++ E++ + +++TP +LI + NDPI
Sbjct: 30 QLKHSIRSISSFETLTG-IQFDKDKRQELEATVAQFPLSITPYYLSLIEKDDYQNDPIFL 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q EL + EREDP+ ++ SP++G+ HRYPDR+L + ++C +YCR C R+ V
Sbjct: 89 QSFADPRELVVQKWEREDPLHEDKDSPVEGLTHRYPDRVLFHVSNICSMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G ++ + + YI+ + +V+ +GGDPL+L L +L LR I+HV+I+
Sbjct: 149 G-DVDSIPNKNQIRKGIDYIRNTPSVRDVLLSGGDPLMLDDDYLDWILTELRRIEHVEIV 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR+P+V P R+ +L+ LK+ PV++ H NHP E + + A+++LA+AGI L
Sbjct: 208 RIGSRMPVVLPYRVTDDLVLMLKKH-HPVWLNTHFNHPRELTHASRTALAKLADAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND P ++ L++ V R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 267 NQSVLLAGVNDCPRLMKTLVQKLVYSRVRPYYLYQCDLSEGLTHFRTPVGKGIEILESLI 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ I + + + ++ ++ Y
Sbjct: 327 GHTSGFSVPTYVIDAPGGGGKIPIMPNYLLSWSPNKVVLRNYEGVITTYREP 378
>gi|289524159|ref|ZP_06441013.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502815|gb|EFD23979.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 442
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL ++ +T L + E+ + + +A+TP A L++P++ N PI Q +
Sbjct: 24 QLVNR-ITDIDTLSRVIALTPEEKKALNDDLLELRMAITPYYATLMDPNDINCPIRMQAV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E N E+ DP+ ++ ++P+ G VHRYPDR +L + C +YCRFC RR G +
Sbjct: 83 PTSAERNTAEEDFHDPLAEDRYAPVPGFVHRYPDRGILLVTDQCSMYCRFCTRRRFAG-E 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S ++ +AA+ YI+ + +++ TGGDPL + + L+ +L +LR I HV+I+R
Sbjct: 142 IDRPKSREEIQAAIDYIERTPVLRDILVTGGDPLTMEDENLEWLLTSLRRIPHVEIIRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP V PQRI L+ LK+ P++I +H NHP E + + A++ LANAGI L +QS
Sbjct: 202 TRVPAVMPQRITNSLVTMLKKF-HPLWINVHFNHPKEITPHSARALNMLANAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND P I L + R++PYY++ DL+ G SHFR ++ +G +I+ L+
Sbjct: 261 VLLRGINDCPYIFKELFHKLLVNRVRPYYIYQCDLSRGISHFRTSVGKGIEIIEFLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G+ P +++D PGG GK+ + + + G + + + Y +
Sbjct: 321 TGMAVPTFVIDAPGGGGKIPVMPNYVLAQGERRIVLRNFEGTITVYTEPEN 371
>gi|270307988|ref|YP_003330046.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS]
gi|270153880|gb|ACZ61718.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS]
Length = 439
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 129/349 (36%), Positives = 195/349 (55%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q +++ +TS ++ + E+ ++ +S + ++ TP +LI+ N NDP+ Q +
Sbjct: 60 QFKNR-VTSVAEIARFFHLSAEEYRDMDSVSAVFPLSATPYYLSLIDFDNVNDPVKLQLM 118
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL DP+G+ + S + G+VHRYPDR+++ L +CPV CR C R+
Sbjct: 119 PDTAELCFDAYCCSDPLGEEHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-KN 177
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 178 GGWVHTQAEIDAMLAYIRQNPVIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIG 237
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI+ EL L + G +++ H NHP E +EE+ A RL AG+ + +QS
Sbjct: 238 TRYPVVLPQRIDDELCNMLSKYG-TIWLNTHYNHPNEITEESRRACDRLVRAGVPVNNQS 296
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND I +L + +++PYYL D GT HF TIE G I+ L+
Sbjct: 297 VLLKGINDSVAIQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTTIETGVGIIEGLRGYT 356
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P Y++DLPGG GK+ + + Y I ++ + +
Sbjct: 357 SGLAVPNYVIDLPGGGGKITVQPDYVLDKQADEYIIRNYKGDIIRFKNP 405
>gi|224367500|ref|YP_002601663.1| KamA1 [Desulfobacterium autotrophicum HRM2]
gi|223690216|gb|ACN13499.1| KamA1 [Desulfobacterium autotrophicum HRM2]
Length = 436
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 122/354 (34%), Positives = 202/354 (57%), Gaps = 6/354 (1%)
Query: 2 QLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
Q++H K++ + L + EQ +K+ + + +++TP +LIN + +DPI R
Sbjct: 29 QIKHCVKSIDLLESLLE-IKLPFEQRVLLKKTMDKFPMSITPYYLSLINTDDLEHDPIFR 87
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q + EL ++ +DP+ ++ SP+ GI HRYPDR+L + + C +YCR C R+ V
Sbjct: 88 QSVASVRELEFSNDDMKDPLHEDKDSPVPGITHRYPDRVLFLVSNRCAMYCRHCTRKRKV 147
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G ++ ++ A + YI+ +I +V+ +GGDPL+LS L +L L I+HV+++
Sbjct: 148 G-DVDSIPGKQEILAGIDYIRNNPEIRDVLLSGGDPLLLSTSYLDWILTELEKIEHVEVI 206
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V P RI + LK P++I H NHP E + A A+++LANAGI L
Sbjct: 207 RIGTRTPVVLPYRITDAMTNMLKRH-HPIWINTHFNHPREVTASARDALTKLANAGIPLG 265
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND P I+ +L+ V R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 266 NQTVLLAGVNDCPRIMRSLVHKLVLNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESLI 325
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG C P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 326 GHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVILRNYEGVITTYKEPLS 379
>gi|78355236|ref|YP_386685.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78217641|gb|ABB36990.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 454
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 118/354 (33%), Positives = 199/354 (56%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
+R+ ++ + + + E+ K + + +++TP +LI+ + +DP+
Sbjct: 30 HVRN-SIRTVEAAEKILGVTFSDEKRALYKRTLDKFPMSITPYYFSLIDQEDYESDPVFM 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P ELN+ P + DP+ ++ SP GI HRYPDR+L + ++C +YCR C R+ V
Sbjct: 89 QAFPDIRELNVSPHDMADPLHEDEDSPAPGITHRYPDRVLFHVSNLCSMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + +V + + YI+ I +V+ +GGDPL+LS +RL +L +R I HV+I+
Sbjct: 149 G-DRDSVPDRGQLKQGIEYIRRTPAIRDVLLSGGDPLMLSDERLDWLLGEIRSIPHVEII 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR+P+V P RI L+ LK+ P+++ H NHP E + + A++R+A+AGI L
Sbjct: 208 RIGSRMPVVLPYRITDGLLAVLKKH-HPLWLNTHFNHPRELTRTSRRALARMADAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL +ND P + L + V+ R++PYY++ DL+ G SHFR + +G +I+ SL
Sbjct: 267 NQSVLLADVNDCPRLFRTLNQKLVQNRVRPYYMYQCDLSEGLSHFRTPVGKGIEIIESLV 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG+ P Y++D PGG GK+ + + G + ++ ++ Y S
Sbjct: 327 GHTSGMAVPTYVIDAPGGGGKIPMMPNYAISQGVNKVVLRNYEGVITTYTEPDS 380
>gi|52549348|gb|AAU83197.1| lysine 23-aminomutase [uncultured archaeon GZfos27A8]
Length = 437
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 117/354 (33%), Positives = 196/354 (55%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
QL H + + +E+ +++ + +++TP +LI+ + NDPI
Sbjct: 30 QLSH-AIRDIDTFEDITCIKFDEEEKQVYEKVLEKFPLSITPYYLSLIDYDDYKNDPIFI 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EL I + +D + ++ SP+ GI HRYPDR+L + ++C +YCR C R+ V
Sbjct: 89 QAFPDPRELVISKYDIKDSLAEDKDSPVPGITHRYPDRVLFLISNICSMYCRHCTRKRRV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G ++ + + + YI+ +I +V+ +GGDPL+LS L +L L+ I HV+++
Sbjct: 149 G-DVDSIPNRSEILKGIEYIKNTPEIRDVLLSGGDPLMLSDSYLDWILTELQTIPHVEVI 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +RVP V P RI +L+ LK+ P++I NHP E + + A+ LA+AGI L
Sbjct: 208 RIGTRVPAVLPYRITDDLVNMLKKH-HPLWINTQFNHPREVTTSSREALRMLADAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND P ++ L++ V+ R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 267 NQSVLLAGVNDCPILMKRLVQRLVQNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESLI 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK++I + + + ++ ++ Y S
Sbjct: 327 GHTSGFAVPSYVIDAPGGGGKIRIMPNYLISWSTNKVILRNYEGVITSYKEPDS 380
>gi|332702266|ref|ZP_08422354.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay]
gi|332552415|gb|EGJ49459.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay]
Length = 447
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 121/353 (34%), Positives = 202/353 (57%), Gaps = 6/353 (1%)
Query: 2 QLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
+RH + + S + L + E + + +++TP +LI+ + NDP+ R
Sbjct: 30 HIRHTIRDIESFETLTG-IRFEPEDRAGYERTLEKFPLSITPYYLSLIDTADYANDPVFR 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P EL+I P + DP+ ++ SP GI HRYPDR+L + ++C +YCR C R+ V
Sbjct: 89 QAFPSVRELDIGPHDMADPLHEDEDSPAPGITHRYPDRVLFHVSNLCAMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G +G + E LAYI+ ++ +V+ +GGDPL+L + L +L LR I+HV+++
Sbjct: 149 G-DEGHIPRRAQMEQGLAYIRSAPRVRDVLLSGGDPLMLPDETLDWLLWNLRKIEHVEVV 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR+P+V P R+ +L+ +++ PV++ H NHP E + A A+++LA+AGI L
Sbjct: 208 RIGSRMPVVLPYRVTDDLMSIIRKH-HPVWLNTHFNHPREVTRSAREALAKLADAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND P I+ +L+ V R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 267 NQSVLLAGVNDCPRIMRSLLHKLVRNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESLV 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG +P Y++D PGG GK+ + + + + ++ ++ Y
Sbjct: 327 GHTSGFARPTYVIDAPGGGGKIPVTPNYVISWATNKVVLRNYEGVITTYAEPD 379
>gi|283781148|ref|YP_003371903.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
gi|283439601|gb|ADB18043.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
Length = 436
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 204/350 (58%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R++ + + Q ++ ++ + + + + +TP +L++ + N P+ R +
Sbjct: 89 QSRNR-IRTLQQFEKMLVLSSDERQALVDGGSMLPVGITPYYMSLLDREDANQPLRRTVV 147
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E P E +DP+G++ HSP G+VHRYPDR+LL L C YCR+C R +VG
Sbjct: 148 PVTGEFLRTPGEADDPLGEDGHSPTPGLVHRYPDRVLLLALDFCSTYCRYCTRSRVVGH- 206
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + E A YI++ I +V+ +GGDPL LS +L +L LR I H++ +R
Sbjct: 207 GEIMPSEQRLEKAFEYIRQTPTIRDVLISGGDPLALSEDKLDWILGRLRSIPHLEFVRIG 266
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+++P V PQRI P+LI+ K+ P++++IH HP E + EA A +RLA+AGI L SQ+
Sbjct: 267 TKMPAVLPQRITPQLIRVFKKYS-PLWMSIHFLHPDECTPEANQACARLADAGIPLGSQT 325
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + + +L+ + +R++PYY++ D +G++HFR ++ +G +I+ L+
Sbjct: 326 VLLKGVNDRVDTMKDLVHRLLMMRVRPYYIYQCDPISGSAHFRTSVSKGLEIIEGLRGHT 385
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P Y++D PGG GK+ + + + + ++ V+ YP +
Sbjct: 386 TGYAVPTYVIDAPGGGGKIPLQPNYVVGRDGNDLLLRNYEGQVYRYPDPT 435
>gi|320334582|ref|YP_004171293.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211]
gi|319755871|gb|ADV67628.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211]
Length = 473
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 194/349 (55%), Gaps = 4/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + S ++L + + + + +TP A+L++P +P P+ RQ I
Sbjct: 38 QLKNR-INSVEELEEVLRLTDSERQG-ASADGIFRLDITPYFASLMDPEDPTCPVRRQVI 95
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG
Sbjct: 96 PTHHELENFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGDP 155
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T + + L Y++ Q+ +V+ +GGDPL L+ K L +L LR I H++I+R
Sbjct: 156 TET-FKPDEYKLQLEYLRNTPQVRDVLLSGGDPLTLAPKVLGGLLAELRKIPHIEIIRIG 214
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P R+ EL L E PV++ IH NHP E + E A RL AG+ L +Q+
Sbjct: 215 TRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQA 273
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND P I+ LMR V++R++PYY++ DL G H R T+ +G +I+ SL+
Sbjct: 274 VLLRGVNDHPVIMQKLMRELVKIRVRPYYIYQCDLVHGAGHLRTTVAKGLEIMESLRGHT 333
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ + + + G G + + + Y
Sbjct: 334 SGYSIPTYVVDAPGGGGKIPVMPNYVLAQGGGKVILRNFEGYIAAYTEP 382
>gi|289432513|ref|YP_003462386.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
gi|288946233|gb|ADC73930.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
Length = 439
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 127/350 (36%), Positives = 193/350 (55%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q +++ +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q I
Sbjct: 60 QFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLI 118
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+
Sbjct: 119 PDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-KN 177
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 178 GGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIG 237
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +QS
Sbjct: 238 TRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQS 296
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND + L + +++PYYL D GT HF IE G I+ L+
Sbjct: 297 VLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYT 356
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P Y++DLPGG GK+ I + Y I ++ + +
Sbjct: 357 SGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEIIRFKNPG 406
>gi|308272545|emb|CBX29149.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.]
Length = 425
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 128/350 (36%), Positives = 206/350 (58%), Gaps = 2/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + + + L + E+ D IK ++ +++TP A+L++ NP P+ R +
Sbjct: 68 QLKNR-IQNYETLSTILTLSAEETDAIKTNGDNLPLSITPYYASLLDKTNPMHPLRRAVV 126
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P + EL E EDP+G++ SP+ GIVHRYPDR+L + C YCR+C R MVG
Sbjct: 127 PVRAELCRSFGEAEDPLGEDADSPVPGIVHRYPDRVLFLVTDFCSTYCRYCTRSRMVGRS 186
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + E AL YI+ + I +V+ +GGDPL L+ L+ +L L I+H++I+R
Sbjct: 187 SACHGGTSNWEKALNYIEANTGIRDVLLSGGDPLTLNDDALEWLLLRLCRIQHLEIVRIG 246
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
++VP+V PQRI L + LK P++I IH HP E + E A +RLA+AGI L SQ+
Sbjct: 247 TKVPVVLPQRITSRLARMLKRY-HPLWINIHFMHPEEVTPETSTACTRLADAGIPLGSQT 305
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGINDD + + L +++R++PYYL+ D G+ HFR ++++G +I+ L+
Sbjct: 306 VLLKGINDDVDTMKELYHRLLKIRVRPYYLYQCDPIIGSGHFRTSVKKGLEIIKGLRGHT 365
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P +++D PGG GK+ + + + ++ +++ YP S
Sbjct: 366 SGLAVPNFVIDAPGGGGKIPLLPEYVLGRYGDEILLKNYEDLIFRYPDSS 415
>gi|147669246|ref|YP_001214064.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
gi|146270194|gb|ABQ17186.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
Length = 439
Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats.
Identities = 127/350 (36%), Positives = 193/350 (55%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q +++ +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q I
Sbjct: 60 QFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLI 118
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+
Sbjct: 119 PDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-KN 177
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 178 GGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIG 237
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +QS
Sbjct: 238 TRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQS 296
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND + L + +++PYYL D GT HF IE G I+ L+
Sbjct: 297 VLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYT 356
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P Y++DLPGG GK+ I + Y I ++ + +
Sbjct: 357 SGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEIIRFKNPG 406
>gi|307298172|ref|ZP_07577976.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916258|gb|EFN46641.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 422
Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats.
Identities = 121/350 (34%), Positives = 202/350 (57%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ + + L I +E+ + E +++TP A L++P+N PI RQ +
Sbjct: 24 QVANR-VKTVDALRQIIDITEEEAHGVAECLRTLRMSITPYYATLMDPNNQRCPIRRQAV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL I + DP+ ++ SP+ G+ HRYPDR+L + C +YCR C RR G Q
Sbjct: 83 PTDKELKIDKWDMIDPLHEDEDSPVPGLTHRYPDRVLFLITDQCSMYCRHCTRRRFAG-Q 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ K+ + A+ YI+E ++ +V+ +GGD L++ L+ +L LR I HV+I+R
Sbjct: 142 LDRARTRKEIDDAIEYIRETPEVRDVLLSGGDALLVGDDYLEYILNELREIPHVEIIRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQR+ PEL++ +++ PV+I H NHP E + ++ A LA+ GI L +QS
Sbjct: 202 TRTPVVLPQRVTPELVKMIRKY-HPVWINTHFNHPLEITPDSTRACEMLADGGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND P I+ L+ V++R++PYY++ DL+ G HFR +I +G I+ SL
Sbjct: 261 VLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIGIMESLIGNT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGLC P +++D PGG GK+++ + + ++ ++ Y
Sbjct: 321 SGLCVPTFVVDAPGGGGKIRVMPQYNISESDRVVVLRNYEGVITTYHEPD 370
>gi|15807697|ref|NP_285351.1| hypothetical protein DR_A0027 [Deinococcus radiodurans R1]
gi|6460574|gb|AAF12280.1|AE001862_106 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 492
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 200/350 (57%), Gaps = 4/350 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + S ++L + + + + + +TP A+L++P +P P+ RQ I
Sbjct: 50 QLKNR-INSVEELQEVLTLTESEYRG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQVI 107
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EEL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG
Sbjct: 108 PTEEELQPFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGDP 167
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T + + EA L Y++ Q+ +V+ +GGDPL L+ K L ++L LR I+H++I+R
Sbjct: 168 TET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDPLTLAPKVLGRLLSELRKIEHIEIIRIG 226
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P R+ EL L E P+++ IH NHP E + E A RL AG+ L +QS
Sbjct: 227 TRVPVFMPMRVTQELCDTLAEH-HPLWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQS 285
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND P I+ L+R V++R++PYY++ DL G H R T+ +G +I+ SL+
Sbjct: 286 VLLRGVNDHPVIMQKLLRELVKIRVRPYYIYQCDLVHGAGHLRTTVSKGLEIMESLRGHT 345
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P Y++D PGG GK+ + + + + + + Y +
Sbjct: 346 SGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAYSEPT 395
>gi|297568546|ref|YP_003689890.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296924461|gb|ADH85271.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 443
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 125/354 (35%), Positives = 197/354 (55%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
LRH T+ S + E+ E++E + +A+TP +LI+ N DP+ R
Sbjct: 34 HLRH-TIKSIDTVERLLNTTFSPEKRRELEETIARFPMAITPHYFSLIDRENYEEDPVFR 92
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL I E DP+ ++ SP+ GI HRYPDR+L + ++C +YCR C R+ V
Sbjct: 93 QSVPSLSELKIGASEHSDPLAEDQDSPVTGITHRYPDRVLFHVSNLCAMYCRHCTRKRKV 152
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G +V K A L YI++ I +V+ +GGDP +L + +L LR I+HV+++
Sbjct: 153 G-DVDSVPGKKTLAAGLDYIRQTPAIRDVLLSGGDPFLLGDDLIDWLLTELRAIEHVEVI 211
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V PQRI P L++ LK+ P+++ H NHP E + + A++ LA+AGI L
Sbjct: 212 RIGTRTPVVLPQRITPRLVEILKKH-HPLWVNTHFNHPREITSRSRRALAMLADAGIPLG 270
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL G+ND P ++ L+ V R++PYYL+ DL+ G + FR + +G +I+ SL
Sbjct: 271 NQSVLLAGVNDCPRVIKRLVHKLVANRVRPYYLYQCDLSEGLASFRTPVGKGIEIIESLI 330
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + + + ++ Y S
Sbjct: 331 GHTSGFAVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNFEGVITTYKEPDS 384
>gi|73748466|ref|YP_307705.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
gi|73660182|emb|CAI82789.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
Length = 439
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 127/350 (36%), Positives = 193/350 (55%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q +++ +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q I
Sbjct: 60 QFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLI 118
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+
Sbjct: 119 PDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-KN 177
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 178 GGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSISHVEIIRIG 237
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +QS
Sbjct: 238 TRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQS 296
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND + L + +++PYYL D GT HF IE G I+ L+
Sbjct: 297 VLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYT 356
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P Y++DLPGG GK+ I + Y I ++ + +
Sbjct: 357 SGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEIIRFKNPG 406
>gi|94985093|ref|YP_604457.1| hypothetical protein Dgeo_0988 [Deinococcus geothermalis DSM 11300]
gi|94555374|gb|ABF45288.1| Lysine 2,3-aminomutase [Deinococcus geothermalis DSM 11300]
Length = 483
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 121/350 (34%), Positives = 193/350 (55%), Gaps = 4/350 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + S ++L + + + + +TP A+L++P +P P+ RQ I
Sbjct: 42 QLKNR-INSVEELEEVIRLTPSERAG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQVI 99
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG
Sbjct: 100 PTHHELEPFTAMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGDP 159
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T + L Y++ Q+ +V+ +GGDPL L+ K L +L LR I+H++I+R
Sbjct: 160 TET-FKPDEYRLQLEYLRNTPQVRDVLLSGGDPLTLAPKVLAGLLSELRKIEHIEIIRIG 218
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P RI EL L E P+++ IH NHP E + E A RL AG+ L +QS
Sbjct: 219 TRVPVFLPMRITQELCDVLAEH-HPLWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQS 277
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND P I+ L+R V++R++PYY++ DL G H R T+ +G +I+ SL+
Sbjct: 278 VLLRGVNDHPVIMQKLVRELVKIRVRPYYIYQCDLVHGAGHLRTTVAKGLEIMESLRGHT 337
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P Y++D PGG GK+ + + + + + + Y +
Sbjct: 338 SGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAYSEPT 387
>gi|294496089|ref|YP_003542582.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
gi|292667088|gb|ADE36937.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
Length = 437
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 119/354 (33%), Positives = 199/354 (56%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIAR 58
QL+H ++ IK E+ D++K+ + +++TP +LI+ + NDPI
Sbjct: 30 QLKH-SIGDVDTFETLLGIKFKAEEKDKLKQTLEKFPLSVTPYYLSLIDTDDFRNDPIFL 88
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P +EL+I ++ EDP+ ++ SP++GI HRYPDR+L + + C +YCR C R+ V
Sbjct: 89 QAFPSPKELDIDEDDLEDPLSEDEDSPVEGITHRYPDRVLFHISNTCSMYCRHCTRKRKV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G ++ + L YI+ + +V+ +GGDP +L L +L LR I HV+I+
Sbjct: 149 G-DVDSIPTRDAVSEGLEYIRNTPHVRDVLLSGGDPFMLPDAYLDWILTKLREIPHVEII 207
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R+P+V P R+ +L++ LK+ P++I H NHP E + + A+ +LA+AGI L
Sbjct: 208 RIGTRMPVVLPYRVTDDLVEILKKH-HPLWINTHFNHPREVTASSREALRKLADAGIPLG 266
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND I+ +L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ L
Sbjct: 267 NQTVLLSGVNDCHRIMKSLVHKLVQNRVRPYYLYQCDLSEGLSHFRTPVGKGIEIMEHLI 326
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D P G GK+ + + + ++ ++ Y S
Sbjct: 327 GHTSGFAVPTYVIDAPHGGGKIPVMPSYLISWSTNRVILRNYEGVITSYKEPDS 380
>gi|325111083|ref|YP_004272151.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
gi|324971351|gb|ADY62129.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
Length = 457
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 116/351 (33%), Positives = 199/351 (56%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q +++ + S + + + + +++ + +TP +L++P +P P+ + +
Sbjct: 109 QAQNR-VRSLEQFERMLELAPFEREALQQGGTMLPVGVTPYYMSLLDPTDPYQPLRKTVL 167
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E P E +DP+G++ HSP+ G+VHRYPDR+LL L C YCR+C R +VG
Sbjct: 168 PSTAEFVRTPGEADDPLGEDGHSPVPGLVHRYPDRVLLLALDFCSTYCRYCTRSRVVGH- 226
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S E Y+Q Q+ +V+ +GGDPL L ++L +L+ LR I H++ +R
Sbjct: 227 GEIAPSDARLEKIFQYLQNSPQVRDVLISGGDPLALKDEKLAYILRRLREIPHIEFVRIG 286
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+++P V PQRI PEL+ ++ PV++++H HP E + E+ A RLA+AGI L SQ+
Sbjct: 287 TKMPAVLPQRITPELVNAIRPY-HPVWMSLHFLHPDECTPESKQACERLADAGIPLGSQT 345
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND+ E + L + R++PYYL+ D +G++HFR ++ +G +I++ L+
Sbjct: 346 VLLKGVNDNVETMKQLTHKLLMNRVRPYYLYQCDPISGSAHFRTSVAKGLEIISGLRGHT 405
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GK+ + + +G + + + YP +
Sbjct: 406 TGYAVPTYVIDAPGGGGKIPLQPDAVVGREDGHLVLRNFEGKLFRYPDPDA 456
>gi|226355793|ref|YP_002785533.1| L-lysine 2,3-aminomutase [Deinococcus deserti VCD115]
gi|226317783|gb|ACO45779.1| putative L-lysine 2,3-aminomutase [Deinococcus deserti VCD115]
Length = 493
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 196/350 (56%), Gaps = 4/350 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + S +L + + + + +TP A+L++P +P P+ RQ I
Sbjct: 42 QLKNR-INSVAELEEVIRLTDSERQG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQVI 99
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG
Sbjct: 100 PTHHELTPFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGDP 159
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T + + EA L Y++ Q+ +V+ +GGDPL L+ K L ++L LR I+H++I+R
Sbjct: 160 SET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDPLTLAPKVLGRLLAELRKIEHIEIVRIG 218
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P R+ EL L E PV++ IH NHP E + E A RL AG+ L +QS
Sbjct: 219 TRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVNHPREITPEVAEACDRLTRAGVPLGNQS 277
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND P I+ L+R V++R++PYY++ DL G H R T+ +G +I+ SL+
Sbjct: 278 VLLRGINDHPVIMQKLVRELVKIRVRPYYIYQCDLVHGAGHLRTTVSKGLEIMESLRGHT 337
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P Y++D PGG GK+ + + + + + + Y +
Sbjct: 338 SGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAYSEPT 387
>gi|224368437|ref|YP_002602600.1| KamA2 [Desulfobacterium autotrophicum HRM2]
gi|223691153|gb|ACN14436.1| KamA2 [Desulfobacterium autotrophicum HRM2]
Length = 435
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 212/351 (60%), Gaps = 5/351 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ + + + L + +++ + + +++TP +LI+P++P+ P+ + +
Sbjct: 86 QIANR-VRTHERLGRMISLSEDEF--MVNSESQLPLSITPYYLSLISPNDPDQPLRKSVV 142
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + E +DP+G+++ SP+ G+VHRYPDR+L LL C YCR+C R +VG
Sbjct: 143 PTVHEWVKMGCESDDPLGEDHQSPVPGLVHRYPDRVLFLLLDFCSTYCRYCTRSRVVGH- 201
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + E A+ YI + I +V+ +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 202 GGILAGRARWEKAIEYIAKTPTIRDVLLSGGDPLTLSDDRLEWVLSRLRKIPHVEIIRIG 261
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
++V V PQRI P+L++ LK P+++++H HP E + EA A + LA+AGI L SQ+
Sbjct: 262 TKVTTVLPQRITPKLVKMLKRY-HPLWMSLHFTHPDECTPEAYKACTMLADAGIPLGSQT 320
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND+ E +A+LM +++R++PYYL+ D G+ HFR +I++G +I+ L+
Sbjct: 321 VLLKGINDNVETMADLMHQLMKMRVRPYYLYQCDPITGSGHFRTSIDKGLEIIHGLRGFT 380
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + +K+ + +T++ + YP S
Sbjct: 381 SGYAVPTYVVDAPGGGGKIPLMPDYVKEHTRETLVLTNYEDKTFCYPDPVS 431
>gi|57234545|ref|YP_181370.1| radical SAM domain-containing protein [Dehalococcoides ethenogenes
195]
gi|57224993|gb|AAW40050.1| radical SAM domain protein [Dehalococcoides ethenogenes 195]
Length = 439
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 128/350 (36%), Positives = 196/350 (56%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q +++ +TS ++ + E+ +++ +S + ++ TP +L++ N NDP+ Q +
Sbjct: 60 QFKNR-VTSVTEIARFFHLSAEEYRDMEAVSAVFPLSATPYYLSLVDFDNVNDPVKCQLM 118
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ELN DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+
Sbjct: 119 PDTAELNFDTRCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-KN 177
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 178 GGWVHTQAEIDAMLAYIRQHQVIRDVIISGGDPLTLSTPRLESVLSALRSIPHVEIIRIG 237
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI+ EL L + G P+++ H NHP E +EE+ A RL AG+ + +QS
Sbjct: 238 TRYPVVLPQRIDDELCNMLSKYG-PIWLNTHYNHPNEITEESRQACDRLVRAGVPVNNQS 296
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND + +L + +++PYYL D GT HF IE G I+ L+
Sbjct: 297 VLLKGINDSVSVQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYT 356
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P Y++DLPGG GK+ I + Y I ++ + +
Sbjct: 357 SGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGDIIRFKNPG 406
>gi|312126722|ref|YP_003991596.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311776741|gb|ADQ06227.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 409
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 128/345 (37%), Positives = 211/345 (61%), Gaps = 5/345 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ +TSA+ L + + +++ +I+++ Y A++P +LI+P++PN PI RQ +
Sbjct: 64 QLKNR-ITSAKILKDLLNLDEKEAQQIEQVGKIYRFAISPYYLSLIDPNDPNCPIKRQSV 122
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR +G +
Sbjct: 123 PSSLELVE--KGDLDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRFIG-E 179
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 180 TDTHASLDDITDAIEYVAQNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRIG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ PQRI +L+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q
Sbjct: 240 TRAPVTLPQRITKDLVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPLGNQM 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 299 VLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGRT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + G + V +
Sbjct: 359 SGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEVFE 403
>gi|326792528|ref|YP_004310349.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427]
gi|326543292|gb|ADZ85151.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427]
Length = 437
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 119/349 (34%), Positives = 193/349 (55%), Gaps = 6/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIAR 58
Q+++ T+ + + I Q +I+ + +A++P +L++ HN NDPI +
Sbjct: 31 QVKN-TIRKVETVEMILGITFSDSQKFDIERTLAQFPMAISPYYLSLVDIHNYDNDPIFK 89
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P ELNI P + DP+ + SP I HRYPDR+L + +VC +YCR C R+ V
Sbjct: 90 QCFPSVLELNISPCDMSDPLHEEVDSPAPCITHRYPDRVLFHVSNVCGMYCRHCTRKRKV 149
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G ++ S + + YI+ I +V+ +GGDP +LS + +LK + I HV+++
Sbjct: 150 G-DLDSIPSKESLLQGIEYIKNTPVIRDVLLSGGDPFLLSDTMIDWLLKEITAIDHVEVV 208
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+V P RI EL+ LK+ +++ H NH E + EA AA+ +L AGI L
Sbjct: 209 RIGTRTPVVLPFRITDELVSILKKYD-NIWLNTHFNHSREMTTEAGAALKKLKLAGIPLG 267
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLLKGIND I+ +L+ + ++PYYL+ DL+ G HFR I G +I+ +L+
Sbjct: 268 NQSVLLKGINDCTYIMKDLLHKLILNGVRPYYLYQCDLSEGLEHFRTNIGTGIEIMENLR 327
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 328 GHTSGFAIPTYVIDAPGGGGKIPVMPNYLVSWSSNKVVLRNYEGVITTY 376
>gi|312135958|ref|YP_004003296.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
owensensis OL]
gi|311776009|gb|ADQ05496.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
owensensis OL]
Length = 407
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 130/345 (37%), Positives = 212/345 (61%), Gaps = 5/345 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +PN PI +Q +
Sbjct: 64 QLKNR-ITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPNCPIKKQSV 122
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G +
Sbjct: 123 PSSFELIE--KGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG-E 179
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 180 TDTHASLDDITDAIEYVAKNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRIG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ PQ+I EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q
Sbjct: 240 TRAPVTLPQKITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPLGNQM 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+N+D I+ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 299 VLLNGVNNDKYIVRKLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGRT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + G G + V +
Sbjct: 359 SGMAVPTYIINAPKGKGKTPIMPNYLLYFGKGKVVFRNWEGEVFE 403
>gi|134298608|ref|YP_001112104.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
reducens MI-1]
gi|134051308|gb|ABO49279.1| L-lysine 2,3-aminomutase [Desulfotomaculum reducens MI-1]
Length = 406
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 131/351 (37%), Positives = 205/351 (58%), Gaps = 3/351 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ +T+ L + ++ D I + +A+TP A+LI + PI Q +
Sbjct: 24 QISNR-ITNVDKLSQFVHLTPKEKDGIAACLKKFRMAITPYYASLIKSEDRQCPIRMQAV 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL + DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR + G Q
Sbjct: 83 PNPKELVCTRGDMRDPLHEDVDSPVPGLTHRYPDRVLLLVTDCCSMYCRHCTRRRIAG-Q 141
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L + A +YI+ I +V+ +GGDP L+ ++L+ +LK LR IKHV+++RF
Sbjct: 142 NDRSLPKAQLDRAFSYIRSNPTIRDVVISGGDPFTLADEQLEYILKKLRAIKHVEVIRFG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI PEL L++ PV+I H NHP E + + AA++RLA AGI + +QS
Sbjct: 202 TRTPVVLPQRITPELCNMLEKY-HPVWINTHFNHPREITPASSAAVARLAKAGIPVNNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND I+ L++ +++RI+PYYL+ DL+ G HFR ++ G +I+ +L+
Sbjct: 261 VLLKGINDRAHIMKKLVQGLLKIRIRPYYLYQCDLSEGIGHFRTSVSTGIEIMENLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SGL P Y++D PGG GK+ I + + G G + + V+ Y +
Sbjct: 321 SGLAVPTYVIDAPGGGGKIPIGPNYLLSQGQGKTVLRNFEGKVYLYTEPDA 371
>gi|254463955|ref|ZP_05077366.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales
bacterium Y4I]
gi|206684863|gb|EDZ45345.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales
bacterium Y4I]
Length = 360
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 197/350 (56%), Gaps = 3/350 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+R++ + S + L + + + + + +TP A+L+ +P++P+ R IP
Sbjct: 1 MRNR-IRSQEALSRIFDLSDGEQEALARHQGGLPVGITPYYASLMGLDDPDEPLRRTHIP 59
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+E LP E DP+G+++ +P+ G+VHRYPDR+L C YCR+C R MVG
Sbjct: 60 VGQEYLQLPGEAGDPLGEDHDTPVPGLVHRYPDRVLFLATGTCSTYCRYCTRSRMVGQAG 119
Query: 123 GTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G S + AL YI ++ +V+ +GGDPL ++ +L +L LR I HV+ +R
Sbjct: 120 GEYQFSVSQWDRALDYIAAHPEVRDVLLSGGDPLTIADDKLDYLLGRLRAIPHVEFIRLG 179
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+++PIV P R+ +L++ LK P++++IH HP E + EA A RLA+AGI L SQ+
Sbjct: 180 AKMPIVLPMRVTRDLVRMLKRH-HPLWMSIHVTHPAELTPEATEACKRLADAGIPLGSQT 238
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND +IL + + + R++PYYL+ D G++HFR + +G +I+ L+
Sbjct: 239 VLLKGINDSVDILKPMYQALLMRRVRPYYLYQCDPITGSAHFRTPVAKGLEIIEGLRGHT 298
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P +++D PGG GK+ + + + + NI++ YP
Sbjct: 299 TGYAVPQFVIDAPGGGGKIPLLPDYVAGRDGSDLILRNFENILYRYPDPG 348
>gi|255994192|ref|ZP_05427327.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989]
gi|255993860|gb|EEU03949.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989]
Length = 426
Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats.
Identities = 115/349 (32%), Positives = 204/349 (58%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ L +A ++ + +++ +I +I + + + +TP A+L++ ++P P+ Q +
Sbjct: 34 QVANR-LGTADEIAEVINLTEQEKADITKILDGFRVGITPYYASLMDENDPMCPVRMQAV 92
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + + DP+ ++ SP G+ HRYPDR+L + C +YCR C RR + G +
Sbjct: 93 PTILEAHRSEADLLDPLHEDEDSPAPGLTHRYPDRVLFLVTDQCSMYCRHCTRRRLAG-E 151
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S +D +A +AYI++ Q+ +V+ +GGD L++ L+ V+K LR I HV+++R
Sbjct: 152 TDGARSIEDIDACIAYIKKTPQVRDVLLSGGDALLIDDDVLEYVIKNLRDIPHVEVVRIG 211
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL++ L++ PV++ H NH E ++ + AA++ LA+AGI L +QS
Sbjct: 212 SRTPVVCPQRITPELVKMLRKY-HPVWLNTHFNHKREVTDTSRAALALLADAGIPLGNQS 270
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND P + L+ V+ R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 271 VLLRGLNDCPHKMRELVHEMVKNRVRPYYIYQCDLSLGIEHFRTPVSKGIEIIEGLRGHT 330
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK + + + ++ ++ Y
Sbjct: 331 SGYAVPTFVVDAPGGGGKTPVMPQYVISQTPHKVILRNYEGVITTYEEP 379
>gi|20807659|ref|NP_622830.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
gi|20516205|gb|AAM24434.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
Length = 419
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 127/348 (36%), Positives = 197/348 (56%), Gaps = 4/348 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ ++ + L + +E+I+ IK +S Y A++P A+L++P NP PI + I
Sbjct: 71 QIRNR-ISDVETLKKIVNLSEEEIENIKRVSTRYRWAISPYYASLMDPDNPFCPIRMRAI 129
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL DP+ + SP I RYPDR+++ + + C ++CR C RR +G +
Sbjct: 130 PSIKELTD-KYGVPDPMAEEYTSPAPLITRRYPDRLIINVTNQCGMFCRHCQRRRNIG-E 187
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+D EAAL YI+ +I +V+ TGGDPL L +++ +L L I HV+I R
Sbjct: 188 VDYPAKHEDIEAALEYIRNNPEIRDVLITGGDPLTLEDEKIDWILSELDKIPHVEIKRIG 247
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+ P+ PQRI EL + L + P+YI NHP E +EEA A +LA AG+ L +Q+
Sbjct: 248 TAAPVTFPQRITDELCKILTKH-LPLYINTQFNHPKEVTEEAKEACFKLARAGVALGNQA 306
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIN+DP ++ L + + +KPYY+ H GT+HF T+++G +I+ L+
Sbjct: 307 VLLKGINNDPHVMKKLNHELLRIMVKPYYIFHAKSVQGTTHFVTTVQDGLEIMEQLRGYT 366
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SGL P+YI++ P G+GK I + VG I + V +YP
Sbjct: 367 SGLAIPWYIINAPEGHGKTPIVPQYLLMVGKEYVLIRNWEGKVFEYPN 414
>gi|312794434|ref|YP_004027357.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181574|gb|ADQ41744.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 407
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 128/345 (37%), Positives = 210/345 (60%), Gaps = 5/345 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ L SA+ L + +++ +I+E++ Y A++P +LI+P +PN PI +Q +
Sbjct: 64 QLKNRVL-SAKTLKELLNLDEKETQQIEEVAKAYRFAISPYYLSLIDPDDPNCPIKKQSV 122
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G +
Sbjct: 123 PSSLELIE--KGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG-E 179
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 180 TDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRIG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q
Sbjct: 240 TRAPVTLPQRITKELVDMLKKYP-PIYINTHFNHPREITKESKRACEMLADSGIPLGNQM 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ +L+ +
Sbjct: 299 VLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIENLRGRT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + G G + + +
Sbjct: 359 SGMAVPTYIINAPKGKGKTPIMPSYLLYFGKGKVVFRNWEGEMFE 403
>gi|222530236|ref|YP_002574118.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
bescii DSM 6725]
gi|222457083|gb|ACM61345.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
bescii DSM 6725]
Length = 407
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 124/345 (35%), Positives = 211/345 (61%), Gaps = 5/345 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + SA+ L + + +++ +I+++ Y A++P +LI+P++PN PI +Q +
Sbjct: 64 QLKNR-IASAKILKDLLNLDEKEAQQIEQVGKIYRFAISPYYLSLIDPNDPNCPIKKQSV 122
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G +
Sbjct: 123 PSSLELIE--KGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG-E 179
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 180 TDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLEWILRSLRQIPHVEIIRIG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ PQRI EL+ LK+ P+YI H NHP E ++++ A L++AG+ L +Q
Sbjct: 240 TRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKDSKRACEMLSDAGVPLGNQM 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 299 VLLNGVNNDMYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGRT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + G + + +
Sbjct: 359 SGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEMFE 403
>gi|312621465|ref|YP_004023078.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312201932|gb|ADQ45259.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 407
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 127/345 (36%), Positives = 209/345 (60%), Gaps = 5/345 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ +S + L + +++ ++I+E++ Y A++P +LI+P NPN PI +Q +
Sbjct: 64 QLKNRVASS-KILKELLNLDEKEAEQIEEVAKSYRFAISPYYLSLIDPDNPNCPIKKQSV 122
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL + DP+ + + SP K I RYPDR+++K+ ++C ++CRFC RR ++G +
Sbjct: 123 PSSFELIE--KGELDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLIG-E 179
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T S D A+ Y+ + I +V+ TGGD L+LS + L +L++LR I HV+I+R
Sbjct: 180 TDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLDWILRSLRQIPHVEIIRIG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A L++AG+ L +Q
Sbjct: 240 TRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLSDAGVPLGNQM 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 299 VLLNGVNNDKYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGRT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + G + + +
Sbjct: 359 SGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEMFE 403
>gi|146295299|ref|YP_001179070.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408875|gb|ABP65879.1| glutamate 2,3-aminomutase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 407
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 129/345 (37%), Positives = 211/345 (61%), Gaps = 5/345 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +P+ PI +Q +
Sbjct: 64 QLKNR-ITSAKILKELLNLDEKEAQQIEEVAKIYRFAISPYYLSLIDPSDPHCPIKKQSV 122
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL + DP+ + + SP K I RYPDR+++K+ ++C ++CRFC RR ++G +
Sbjct: 123 PSSFELIE--KGELDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLIG-E 179
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 180 TDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRIG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ PQRI EL+ LK+ P+Y+ H NHP E ++E+ A LA+ GI L +Q
Sbjct: 240 TRAPVTLPQRITKELVDMLKKY-HPIYVNTHFNHPREITKESKRACEMLADGGIPLGNQM 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 299 VLLNGVNNDKYVVRRLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGRT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + G G + V +
Sbjct: 359 SGMAIPTYIINAPKGKGKTPIMPNYLLYFGKGKVVFRNWEGEVFE 403
>gi|268315713|ref|YP_003289432.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus
DSM 4252]
gi|262333247|gb|ACY47044.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus
DSM 4252]
Length = 396
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 127/349 (36%), Positives = 197/349 (56%), Gaps = 5/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+RH+ + +A++L + E+ I+ + +TP A+L++P +PN PI RQ +
Sbjct: 19 QMRHR-IHTAEELSRWIRLTDEERRAIEATRGVFRWNITPYYASLMDPEDPNCPIRRQVV 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ EEL DP+ + HSP+K ++H Y DR+ + C +YCR+C R+ MVG
Sbjct: 78 PRLEELAPDLIGVMDPLEEVAHSPVKNLIHNYRDRVAFCVTSECAIYCRYCLRKRMVG-D 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
++ + +AA+ YI +I +V+ TGGDPL LS L +L LR I HV+I+R
Sbjct: 137 AAFMMRKAELQAAIDYIAAHPEIRDVLLTGGDPLTLSETHLAWILDQLRAIPHVEIIRIG 196
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+P+ P RI PEL + L+ P++I H NHP E + +A AI RL AGI + +Q+
Sbjct: 197 TRMPVKLPYRITPELCRLLERY-HPLWINTHFNHPKELTPDAAEAIDRLLRAGIPVGNQT 255
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GINDD + L V +R++PYYL+ L GT+HFR IE+G I+ +L+ +
Sbjct: 256 VLLRGINDDVATMKALCEGLVRMRVRPYYLYQAQLIGGTAHFRTPIEKGMAIMRALQGRT 315
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+G P Y+LD P YGKV +D ++ + ++ P
Sbjct: 316 TGFAIPKYVLDTP--YGKVPLDGSYVRGRAGDYVIVETPRGVLWAEPNP 362
>gi|169830385|ref|YP_001716367.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169637229|gb|ACA58735.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 420
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 132/349 (37%), Positives = 205/349 (58%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL ++ +T+ +L N + E+ ++ +A+TP A+L++P NP DPI +Q +
Sbjct: 25 QLANR-VTTVDELRNLINLTPEEEQGVRRCLETLRMAITPYYASLMDPDNPEDPIRKQAV 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL E DP+ + SP+ GI HRYPDR+LL L C +YCR C RR + G
Sbjct: 84 PLAAELQFGLAESRDPLAEEVDSPVPGITHRYPDRVLLLLTDQCAMYCRHCTRRRLAGK- 142
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L +AAL YI++ + I +V+ +GGD L+L+ RL +L++LR I HV+I+R
Sbjct: 143 TDRALPPARIKAALEYIRKTTAIRDVLLSGGDSLLLAEDRLGGILESLRAIDHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQRI PEL L+ PVY+ +H NHP E + EA A LA+AG+ L +Q+
Sbjct: 203 TRTPVVLPQRITPELCALLRRF-HPVYVNMHFNHPKEVTPEAAEACRMLADAGLPLANQT 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND P ++ +LM + + +R++PYYL+ DL+ G HFR T+ +G +I+ L+
Sbjct: 262 VLLRGVNDCPYVIKDLMHSLLRIRVRPYYLYQCDLSPGLEHFRTTVAQGIEIIELLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P Y++D PGG GK+ + + + ++ ++ Y
Sbjct: 322 SGLAVPTYVVDAPGGGGKIPVAPQYMISQSERMVILRNYEGVITAYTEP 370
>gi|312877848|ref|ZP_07737796.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795395|gb|EFR11776.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 407
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 129/345 (37%), Positives = 209/345 (60%), Gaps = 5/345 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ L SA+ L + +++ +I+E++ Y A++P LI+P +PN PI +Q +
Sbjct: 64 QLKNRVL-SAKTLKELLNLNEKETQQIEEVAKVYRFAISPYYLLLIDPDDPNCPIKKQSV 122
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G +
Sbjct: 123 PSSFELIE--KGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG-E 179
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 180 TDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRIG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q
Sbjct: 240 TRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLADSGIPLGNQM 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 299 VLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGRT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + G G + + +
Sbjct: 359 SGMAVPTYIINAPKGKGKTPIMPSYLLYFGKGKVVFRNWEGEMFE 403
>gi|260893262|ref|YP_003239359.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4]
gi|260865403|gb|ACX52509.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4]
Length = 427
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 195/348 (56%), Gaps = 5/348 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
L+++ +TS + L + +E+ + I+++ Y A++P +L+ +P+ PI RQ +
Sbjct: 75 HLKNR-ITSVEVLEKLIPLTQEEKEAIRQVERVYRWAVSPYYLSLMG-EDPSCPIRRQAL 132
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL DP+ + SP GI RYPDR+++ + + C +YCR C RR +G +
Sbjct: 133 PSAAELED-EVGSLDPMAEEWTSPAPGITRRYPDRLIINVTNRCAMYCRHCQRRRNIG-E 190
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + E AL YI++ +I +V+ TGGD L+LS L +L L I HV+I R
Sbjct: 191 VDRDRTRWELEEALEYIRQNKEIRDVLLTGGDALLLSDSVLDWLLTELDRIPHVEIKRIG 250
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ PQRI L + L + P+Y+ NHP E ++EA AA RLA AG++L +Q+
Sbjct: 251 TRVPVTLPQRITDNLCRILAKHP-PIYLNTQFNHPREITKEAKAACDRLAEAGVVLGNQA 309
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+N+ P I+ L + +++R++PYYL L GT+HF IEEG +I+ L+
Sbjct: 310 VLLRGVNNHPFIMRKLNQELLKIRVRPYYLFQAKLVKGTTHFVTPIEEGIEIMEYLRGYT 369
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SGL P YI++ P G GK+ I + + + N + YP
Sbjct: 370 SGLAVPTYIINAPQGLGKIPILPQYLLAIDEDHVVLRTWENKIVRYPN 417
>gi|262197122|ref|YP_003268331.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
gi|262080469|gb|ACY16438.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
Length = 419
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 125/349 (35%), Positives = 196/349 (56%), Gaps = 4/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R+ LT+A++ + E+ + + + + TP A+L++P + PI +Q I
Sbjct: 39 QARN-MLTTAEEFARVVELSDEERAALVDTAPMFRTGATPYYASLMDPARADCPIRKQAI 97
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P + EL+ PEE DP+G+++ SP +VH+YPDR+LL +L C +YCR C RR +VG
Sbjct: 98 PSRRELDFAPEELRDPLGEDSQSPAPCVVHKYPDRVLLLVLDRCAIYCRHCNRRRLVG-- 155
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ D +A + YI QI +V+ +GGDPL+LS+ RL +L LR I+HV+I+R
Sbjct: 156 GDAPPARDDIDAGIDYIARTPQIRDVLLSGGDPLLLSNARLAHILGRLRAIEHVEIIRIG 215
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+P+V P RI+ EL L+ P+YI H NHP E + EA AA RL ++GI + +Q+
Sbjct: 216 TRLPVVLPMRIDDELCATLRRF-HPLYINTHFNHPKEITSEARAACERLVDSGIPVGNQA 274
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+N + LMR + +R++PYYL D GT H R ++ ++ L+
Sbjct: 275 VLLRGVNSSVRCIRALMRALLRMRVRPYYLFQGDTVLGTDHMRTPVDAAIALMEGLRGWT 334
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG+ P ++D PGG GK+ + + + + V YP
Sbjct: 335 SGMAIPHMVIDAPGGGGKLPFGPEYVLERHPDHVLVRTYRGRVVRYPEP 383
>gi|241206810|ref|YP_002977906.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240860700|gb|ACS58367.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 350
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 199/346 (57%), Positives = 259/346 (74%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L+ ++E++ Y++ALTP I+ LI+ +P+DPIARQF+P
Sbjct: 5 KPIKSVDDLVKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + AA YI+ +IWEVI TGGDPL+LS +RL ++++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMRAAFDYIRGHEEIWEVILTGGDPLVLSPRRLGEIMEALAGIAHVKIIRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANH E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIGALKASGKTVYVALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IV +L+ +ISGLC
Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVEALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I ++ G+G Y +TD+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYSVTDYRGGEHSYPPAD 350
>gi|89896773|ref|YP_520260.1| hypothetical protein DSY4027 [Desulfitobacterium hafniense Y51]
gi|219667394|ref|YP_002457829.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium
hafniense DCB-2]
gi|89336221|dbj|BAE85816.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219537654|gb|ACL19393.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium
hafniense DCB-2]
Length = 413
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 133/348 (38%), Positives = 198/348 (56%), Gaps = 4/348 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + A++L + +Q EI E+ Y A++P +LI+ +P DPI Q +
Sbjct: 69 QLKNR-IQDAENLSTLLPLTPKQRHEINEVGKAYRWAVSPYYLSLIDKDDPQDPIRLQSL 127
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE+ E DP+G+ SP I RYPDR+++ + ++C +YCR C RR +G +
Sbjct: 128 PSVEEILDDSGE-ADPMGEEYTSPAPCITRRYPDRLIINVTNLCAMYCRHCQRRRNIG-E 185
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + EAAL YI+ +I +V+ TGGD L+LS + L +L L IKHV+I R
Sbjct: 186 IDLHETRANLEAALDYIRSNPEIRDVLVTGGDALLLSDQMLDWLLGELHEIKHVEIKRIG 245
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P RI EL L++ P+YI NHP E +EE A RL AG+IL +Q+
Sbjct: 246 TRVPVTLPMRITDELCAILEKYP-PLYINTQFNHPQEVTEETKKAADRLIKAGVILGNQA 304
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND PEI+ L + +++R++PYY+ H GTSHF I++G +I+ +L+
Sbjct: 305 VLLKGINDQPEIMKRLNQELLKIRVRPYYIFHAKNVKGTSHFIPRIQDGLRIMENLRGYT 364
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SGL P YI++ PGG GK I + + + I V YP
Sbjct: 365 SGLAIPTYIINAPGGGGKTPILPQYLISLNDEEAVIRTWEGKVVHYPN 412
>gi|78358081|ref|YP_389530.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220486|gb|ABB39835.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 527
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 199/350 (56%), Gaps = 4/350 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q ++ +TS L + +E+ +A+TP A +PHNP P+ R +
Sbjct: 157 QYANR-ITSLGVLGTMLGLSEEE-AGAGTGLAALPLAVTPYYAAQFDPHNPAHPLRRTMV 214
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE ++ P E DP+G+++HSP+ G+VHRYPDR+L C YCR+C R VG
Sbjct: 215 PTVEEWSLNPGESADPLGEDSHSPVPGLVHRYPDRVLFLATDSCSAYCRYCTRSRRVGKP 274
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + AA+ YI+ ++ +V+ +GGDPL ++ L +L LR I HV+ +R
Sbjct: 275 CAGSASRRRWPAAIEYIENHPEVRDVLISGGDPLTMTDSALNHLLSQLRRIPHVEFIRIG 334
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
++ PIV PQRI P L++ L+ P++++IH HP E + EA A++RLA+ GI L SQ+
Sbjct: 335 TKAPIVMPQRITPALVRMLRRY-HPLFMSIHCTHPDELTPEASQALNRLADGGIPLGSQT 393
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND+ + LM+ ++ R++PYYL+H D G++HFR I +G +I+ ++
Sbjct: 394 VLLKGINDNVPTMTALMQGLLKNRVRPYYLYHCDPVQGSAHFRTPIYKGVEIIRGMRGFT 453
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD-YPPK 350
+G P Y++D PGG GK+ + ++ + ++ ++ Y P
Sbjct: 454 TGYAVPTYVVDAPGGGGKIPLMPDYVQGYDGEELVMRNYEGGLYRSYDPA 503
>gi|325972392|ref|YP_004248583.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
gi|324027630|gb|ADY14389.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
Length = 421
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 203/347 (58%), Gaps = 4/347 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H+ +T+ DL + + + +K + ++TP +LI+P++P + R I
Sbjct: 71 QLFHR-ITTYADLCRFLTPTESEREALKSADTLFPFSVTPYYLSLIDPNDPTSALRRTVI 129
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + E DP+ + + + ++G+VHRYPDR+L C YCR+C R MVG
Sbjct: 130 PSIEESYVGKGESADPLAEEHTTAVQGLVHRYPDRVLFLTTSFCSTYCRYCTRSRMVGGH 189
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ K E A+ YI+E +++ +V+ +GGDPL LS + + +L + I HV+++R
Sbjct: 190 TEAL--QKHWEGAINYIKEHTEVRDVVISGGDPLTLSDEMIDYLLDQVTSIDHVEMVRIG 247
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
++VP+V PQRIN L+ L++ KP+Y++IHA HP E ++E++ A + LA++G++L SQ+
Sbjct: 248 TKVPMVMPQRINESLLAILRKY-KPIYMSIHATHPDELTKESVRACNALADSGVVLGSQT 306
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND +L +L + R+KPYYL D +G+ HFR T+++G+ ++ L+
Sbjct: 307 VLLKGVNDSVSVLTDLFHKLLRARVKPYYLFQCDPISGSEHFRTTVDKGKALMQGLRGFT 366
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P Y++D PGG GKV I + + ++ V YP
Sbjct: 367 SGYAIPQYVIDTPGGGGKVPILPQYEVGQDDEHLYLRNYEGKVFTYP 413
>gi|209885154|ref|YP_002289011.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans
OM5]
gi|209873350|gb|ACI93146.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans
OM5]
Length = 357
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 177/347 (51%), Positives = 240/347 (69%), Gaps = 3/347 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L NL+ ++ + ++ ++ Y+IA+TP +A LI+P++PNDPIARQ++P +E
Sbjct: 11 TLRQPAELAAHNLVSQDALQGLEAVAKRYAIAITPAVAELIDPNDPNDPIARQYVPSPQE 70
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L ER DPIGD HSP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L
Sbjct: 71 LQSETIERVDPIGDRAHSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKETAL 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S A+ YI+ +IWEVI TGGDPL+LS +RL+++ L I HV+I+RFH+RVPI
Sbjct: 131 SDAAYTKAIDYIRTHPEIWEVILTGGDPLMLSARRLKEITADLAAIPHVRIVRFHTRVPI 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP+R+ E+ L+ ++A+HANHP E + A AA +RL + GI L+SQSVLL+G
Sbjct: 191 ADPERVTDEVADALRHPDVTTWVAVHANHPRELTPTARAACARLIDRGIPLVSQSVLLRG 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L LMR FVE RIKPYYLHH DLA GT+H R ++EEG+ ++ L+ +SGLCQ
Sbjct: 251 VNDTVETLTALMRAFVECRIKPYYLHHGDLAPGTAHLRTSLEEGEALMRKLRGYVSGLCQ 310
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350
P Y+LD+PGG+GK+ + + G G + D+ VH YPP+
Sbjct: 311 PDYVLDIPGGFGKIPVGPVYLSPEGAGPTQRRRLLDYCGEVHVYPPE 357
>gi|298571349|gb|ADI87692.1| L-lysine 2,3-aminomutase [uncultured Nitrospirae bacterium MY2-3C]
Length = 419
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 117/350 (33%), Positives = 186/350 (53%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + +L S Q L ++ ++ +E++ Y +TP +LI+ NPNDPI RQ I
Sbjct: 36 QLSN-SLRSVQALGELLNLQPHEVARYQELTRRYHYRITPYYLSLIDFTNPNDPIRRQGI 94
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL+ DP+ + S + G+VHRYPDR L + C +YCR C R+ M +
Sbjct: 95 PDLSELDFQRVGYSDPLEEEEDSQVPGLVHRYPDRALAIVTSKCAMYCRHCTRKRMWH-E 153
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + A + YI+ + I EVI +GGDPL ++ + L L LR I +++LR
Sbjct: 154 GESFRSRDELTAMIDYIRGEVGIREVIVSGGDPLTMNLQLLDWFLGELRAIPRLEVLRIG 213
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+P+V P I EL+Q L P+++ NHP E + +I A R+ AGI + +QS
Sbjct: 214 TRLPVVLPMAITDELVQMLARHR-PLWLNTQFNHPNELTPASIEACDRILRAGIPVSNQS 272
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND E++ +L + ++PYYL D +G HFR +I +G +I+ ++
Sbjct: 273 VLLRGVNDSVEVMKDLCHALQRVMVRPYYLFQCDPVSGAEHFRTSIWKGIEIIEMMRGHT 332
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
GLC P +++D PGG GKV + + + ++ + Y
Sbjct: 333 GGLCIPTFVVDAPGGGGKVPLQPFYLLSTSEDEVLLRNYEGSIIRYYNPG 382
>gi|302392039|ref|YP_003827859.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501]
gi|302204116|gb|ADL12794.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501]
Length = 401
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 131/349 (37%), Positives = 207/349 (59%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL++ ++T+A +L I +Q +EIKE + + +++TP A+LI+ + PI Q +
Sbjct: 23 QLKN-SITTADELQQYFDIDDQQAEEIKEAAKIFPMSITPYYASLIDFDDELCPIKLQAV 81
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
PQKEEL E EDP+ + SP+ G+ HRYPDR+LL + + C ++CR C R+ VG
Sbjct: 82 PQKEELEEYEYEMEDPLHEEEDSPVPGLTHRYPDRVLLMVTNYCSMFCRHCTRKRKVG-D 140
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T +A + YI+ Q+ +V+ +GGDPL+L +L+K++ L+ I HV+I+R
Sbjct: 141 GNTQDDFDQIQAGIEYIKNNPQVRDVLLSGGDPLLLDLDKLEKIIARLKEIPHVEIVRLG 200
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP+V PQRI+ ELI LK+ P++I H NH E + + A+++LA+ G L +Q+
Sbjct: 201 SRVPVVLPQRIDDELIARLKKYS-PLWINTHFNHKKEITSRSKKALAKLADNGFPLGNQT 259
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+ IND P ++ +LM V R++PYYL+ DL+ G HFR +I G +I+ SL
Sbjct: 260 VLLRNINDSPAVMEDLMHKLVANRVRPYYLYQCDLSRGIEHFRTSISTGIEIIESLIGHT 319
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ I + + + + ++ + Y
Sbjct: 320 SGFAVPRYVVDAPGGGGKIPISPNYVISSSSQKTILRNYEGDIVAYREP 368
>gi|310822787|ref|YP_003955145.1| l-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|309395859|gb|ADO73318.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
Length = 411
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 118/349 (33%), Positives = 187/349 (53%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q RH + S L + ++ ++E + + + ++P +LI+P +P P+ Q I
Sbjct: 48 QQRH-AVRSLAQLERYVPLTPQERAGVQETAALFRVGISPYYLSLIDPEHPFCPVRMQSI 106
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EE I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR +
Sbjct: 107 PVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRR-ITKG 165
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
LS +AYI+ ++ +V+ +GGDP ILS RL+++L L I HV+++R
Sbjct: 166 GEAELSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRIG 225
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P R+ L L+ PVY+ H NHP E + EA A RL + G+ + +Q+
Sbjct: 226 TRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQA 284
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VL++ +N D I+ L + +R++PYYLH D+A G H R I +G +I+ ++
Sbjct: 285 VLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGHT 344
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+GL P +DLPGG GKV + + + G ++ + YP
Sbjct: 345 TGLAVPHLAVDLPGGGGKVTLQPDYVVERGEHETVFRNYKGERYVYPEP 393
>gi|296133315|ref|YP_003640562.1| lysine 2,3-aminomutase YodO family protein [Thermincola sp. JR]
gi|296031893|gb|ADG82661.1| lysine 2,3-aminomutase YodO family protein [Thermincola potens JR]
Length = 448
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 117/349 (33%), Positives = 190/349 (54%), Gaps = 4/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
++++ + + L + ++I++IK++ + A++P A+L++ +P+ P+ Q I
Sbjct: 91 HMKNR-IRDVEVLAQIIDLTDKEIEDIKKVGQKFRWAISPYYASLMSERDPSCPVRLQAI 149
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL ++DP+G+ SP I RYPDR+++ + + C +YCR C RR +G +
Sbjct: 150 PSILELLDQS-GKDDPMGEEFTSPAPCITRRYPDRLIINVTNQCAMYCRHCQRRRNIG-E 207
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ +AA+ YI+ +I +V+ TGGD L+LS+ L +L L I HV+I R
Sbjct: 208 VDRNKPRSEIKAAIEYIRANPEIRDVLITGGDALLLSNSELDWILTQLDSIPHVEIKRIG 267
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQRI P+L + L++ P+YI NHP E + A +L AG +L +Q+
Sbjct: 268 TRTLVSMPQRITPQLCEILEKHP-PLYINTQFNHPKEITPAVAEACDKLIKAGAVLGNQA 326
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GIN++ ++ L +++RI+PYY+ H GTSHF +EEG KI+ L+
Sbjct: 327 VLLNGINNNVHVMKKLNHELLKVRIRPYYIFHAKTVTGTSHFITKVEEGIKIMEKLRGYT 386
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P YI++ P GYGK + + G I V YP K
Sbjct: 387 SGLAVPTYIINAPKGYGKTPMLPEYLISSGEDEIVIRTWEKKVISYPNK 435
>gi|108761049|ref|YP_632864.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
gi|108464929|gb|ABF90114.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
Length = 410
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 115/349 (32%), Positives = 183/349 (52%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q RH + + L + + ++E S + I ++P +LI+P +P P+ Q I
Sbjct: 40 QQRH-AVRGLEQLERYVPLTSNERAGVQETSALFRIGISPYYLSLIDPEHPFCPVRMQSI 98
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P + E I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR +
Sbjct: 99 PVRAEARIRPGELADPLGEDKTRPEECIVHKYPDRVLFLALDTCSVYCRHCTRRR-ITQG 157
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
LS + + Y++ ++ +V+ +GGDP +LS RL+++L L I HV+++R
Sbjct: 158 GVAELSKEQLRRGVDYVRSHPEVRDVLISGGDPFMLSDSRLEELLAPLSEIPHVEMIRIG 217
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P R+ L + L+ PV++ H NHP E + EA A RL + G+ + +Q+
Sbjct: 218 TRVPVCLPMRVTDALAKTLRRYA-PVFVVTHFNHPKEVTPEAREACERLVDHGVPVENQA 276
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VL++ +N D I+ L + R++PYYLH D+A G H R I +G +I+ L+
Sbjct: 277 VLMRQLNSDARIIKELSHLLLRSRVRPYYLHQMDVAEGCEHLRTPIAKGLEIIQQLRGYT 336
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+GL P +DLPGG GKV + + G ++ YP
Sbjct: 337 TGLAVPHLAVDLPGGGGKVTLQPDYAVEYGAQETVFRNYKGERFTYPEP 385
>gi|299133809|ref|ZP_07027003.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2]
gi|298591645|gb|EFI51846.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2]
Length = 357
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 179/348 (51%), Positives = 243/348 (69%), Gaps = 4/348 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L + L+ +E + ++ ++ Y+IA+TP +A LI+P++PNDPIARQ++P +E
Sbjct: 10 TLRRPAELADQKLVSREALPALEAVAARYAIAITPAVAALIDPNDPNDPIARQYVPSTQE 69
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L I P ER DPIGDN SP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K + L
Sbjct: 70 LQIEPVERVDPIGDNARSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKDSAL 129
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S A+ YI+ +IWEVI TGGDPL+LS +RL++++ L I HV+I+RFH+RVP+
Sbjct: 130 SDHAYAKAIDYIRTHPEIWEVILTGGDPLMLSTRRLKEIVNDLAAIPHVKIIRFHTRVPV 189
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP R+ E+ + L ++A+HANHP E + EA AA +RL + GI ++SQSVLL+G
Sbjct: 190 ADPARMTDEVAEALHHPDVTTWVALHANHPRELTAEARAACARLIDRGIPMVSQSVLLRG 249
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L LMR FVE RIKPYYLHH DLA GTSH R T+EEG+ ++ L+ +SGLCQ
Sbjct: 250 VNDTAETLTALMRAFVECRIKPYYLHHGDLAPGTSHLRTTLEEGEALMRQLRGHVSGLCQ 309
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYC----ITDHHNIVHDYPPK 350
P Y+LD+PGGYGK+ + + + +G + D+ VH YPP
Sbjct: 310 PDYVLDIPGGYGKIPVGPAYLSQQRDGERMQPRRLVDYCGGVHSYPPA 357
>gi|116254324|ref|YP_770162.1| L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258972|emb|CAK10081.1| putative L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 350
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 201/346 (58%), Positives = 260/346 (75%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L+ ++E++ Y++ALTP I+ LI+ +P+DPIARQF+P
Sbjct: 5 KPIKSVDDLMKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI +IWEVI TGGDPL+LS +RL ++++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIHSDEEIWEVILTGGDPLVLSSRRLGEIMEALAGITHVKIIRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VYIA+HANH E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYIALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I ++ G+G Y +TD+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYTVTDYRGGEHSYPPAD 350
>gi|83589322|ref|YP_429331.1| L-lysine 2,3-aminomutase [Moorella thermoacetica ATCC 39073]
gi|83572236|gb|ABC18788.1| glutamate 2,3-aminomutase [Moorella thermoacetica ATCC 39073]
Length = 415
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 120/346 (34%), Positives = 188/346 (54%), Gaps = 5/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H+ +TS L + + + + I ++ Y A++P +L+ P P+ PI RQ +
Sbjct: 65 QLTHR-ITSVATLAELIPLTEAEKEAILKVERTYRWAVSPYYLSLMGPE-PDCPIRRQAL 122
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL DP+ + SP I RYPDR+++ + + C +YCR C RR +G +
Sbjct: 123 PSAAELEDN-HGVLDPMDEELTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRRNIG-E 180
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S ++ E AL YI++ +I +V+ TGGD L+LS + +L L I HV+I R
Sbjct: 181 VDRSRSRRELEQALQYIRQNEEIRDVLITGGDALMLSDAMIDWLLTELDNIPHVEIKRLG 240
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ PQRI PEL + L + P+Y+ NHP E + A A RL AG++L +Q+
Sbjct: 241 TRVPVTMPQRITPELCRVLAKHP-PIYLNTQFNHPREVTAAAKEACDRLVQAGVVLGNQA 299
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+N+ P ++ L + +++R++PYY+ H GT+HF +IEEG +I+ L+
Sbjct: 300 VLLKGVNNHPFVMRKLNQELLKIRVRPYYIFHAKPVKGTTHFITSIEEGVEIMDKLRGYT 359
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P YI++ P G GK I + + + + Y
Sbjct: 360 SGLAVPTYIINAPHGLGKTPILPQYVIARNDHQVILRTWEKRIIFY 405
>gi|282897351|ref|ZP_06305353.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii
D9]
gi|281198003|gb|EFA72897.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii
D9]
Length = 375
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 127/349 (36%), Positives = 201/349 (57%), Gaps = 4/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+RH+ LT + + E+ + +++A+TP A+L++P + N P+ Q I
Sbjct: 29 QMRHR-LTKLEQFQKLLCLTPEEEQGFIMAVDKFAVAVTPYFASLLDPEDANCPLRLQVI 87
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+KEEL + + DP G++N SP+ GIVHRYPDR+LL L C YCR+C R +V SQ
Sbjct: 88 PRKEELIVSSGDMIDPCGEDNQSPVPGIVHRYPDRVLLLALDSCAAYCRYCTRSRLV-SQ 146
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+A + Y+++ +++ +V+ +GGDPL++S++ L +L LR I H++ +R
Sbjct: 147 GEMTPIKHRLDAMINYLEDHTEVRDVLISGGDPLLMSNQVLDSLLGRLRGISHIEFVRIG 206
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP PQRI PEL++ L++ V++++H H E + E A LA+ GI L Q+
Sbjct: 207 SRVPCFLPQRITPELVKVLRKHR--VWLSVHFCHLRELTLEVAQACDLLADGGIPLGCQT 264
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L NL ++LR++PYYL+ D GTSH R +I+ G +++ L+
Sbjct: 265 VLLKGVNDSEQALKNLFHGLLKLRVRPYYLYQCDPVVGTSHLRTSIQSGLDLISKLRSHT 324
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+G P Y++D PGG GKV I + NG + + + Y
Sbjct: 325 TGYAIPTYVIDAPGGGGKVPIQPETLIGYENGKAIVKNWQDRSFTYLDP 373
>gi|15889814|ref|NP_355495.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58]
gi|15157746|gb|AAK88280.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58]
Length = 363
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 200/349 (57%), Positives = 267/349 (76%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R +T+ + + L A LI+ E ++ ++ ++ Y++A+TP + L++ H+P DPIARQF+P
Sbjct: 12 RFETIKTPEALLEAGLIEAEALEGLRAVTQRYALAITPAVTGLMDSHDPQDPIARQFVPD 71
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EL LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 72 LAELVHLPEERDDPIGDDAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGN 131
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
++S ++ +AA AYI+E IWEVI TGGDPL+LS +RL ++K LR I HV+I+RFH+R
Sbjct: 132 GMMSPEELDAAFAYIKENPAIWEVILTGGDPLVLSPRRLSDLMKRLRDIPHVKIVRFHTR 191
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+VDP RI+ LI+ LK +GK Y+A+HANH E + A A +RL +AGI ++SQ+VL
Sbjct: 192 VPVVDPDRIDAPLIEALKASGKTTYVALHANHARELGDAARNACARLIDAGIAMVSQTVL 251
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
LKGINDDP +LA+LMR+FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+ +SG
Sbjct: 252 LKGINDDPAVLADLMRSFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRGHVSG 311
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
LCQP Y+LD+PGG+GK I + +K +G Y ++D + H YPP +S
Sbjct: 312 LCQPTYVLDIPGGHGKAMIGRNAAEKTRDGCYSVSDFNGNDHIYPPATS 360
>gi|126699870|ref|YP_001088767.1| L-lysine 2,3-aminomutase [Clostridium difficile 630]
gi|254975845|ref|ZP_05272317.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-66c26]
gi|255093232|ref|ZP_05322710.1| L-lysine 2,3-aminomutase [Clostridium difficile CIP 107932]
gi|255307270|ref|ZP_05351441.1| L-lysine 2,3-aminomutase [Clostridium difficile ATCC 43255]
gi|255314974|ref|ZP_05356557.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-76w55]
gi|255517649|ref|ZP_05385325.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-97b34]
gi|255650759|ref|ZP_05397661.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-37x79]
gi|260683845|ref|YP_003215130.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196]
gi|260687505|ref|YP_003218639.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291]
gi|306520670|ref|ZP_07407017.1| lysine 2,3-aminomutase YodO family protein [Clostridium difficile
QCD-32g58]
gi|115251307|emb|CAJ69138.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Clostridium difficile]
gi|260210008|emb|CBA64044.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196]
gi|260213522|emb|CBE05249.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291]
Length = 422
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 116/349 (33%), Positives = 186/349 (53%), Gaps = 4/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL ++ +T L + K++ + IKE+ + A++P +LI+P + DPI I
Sbjct: 63 QLSNR-ITDVDTLSKIITLTKKEKEYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSI 121
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL +E DP+G+ +P I RYPDR+++ + + C +YCR C RR +G Q
Sbjct: 122 PTHIELED-EQEDLDPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIGQQ 180
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + ++ YI+E +I +V+ TGGD L L L+ +L L+ I HV +R
Sbjct: 181 -DSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQRI E LK+ PVYI H NHP E ++E+ A +LANAG+ L +Q+
Sbjct: 240 TRTLVTMPQRITDEFCNMLKKY-HPVYINTHFNHPMEITKESKEACEKLANAGVPLGNQA 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GIN+D ++ L + +++R+KPYY+ GT HF ++++G +I+ L+
Sbjct: 299 VLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG+ P YI++ P G GK + + G + V +
Sbjct: 359 SGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKVIKMEDE 407
>gi|255101396|ref|ZP_05330373.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-63q42]
Length = 422
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 115/349 (32%), Positives = 186/349 (53%), Gaps = 4/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL ++ +T L + K++ + IKE+ + A++P +LI+P + DPI I
Sbjct: 63 QLSNR-ITDVDTLSKIITLTKKEKEYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSI 121
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL +E DP+G+ +P I RYPDR+++ + + C +YCR C RR +G Q
Sbjct: 122 PTHIELED-EQEDLDPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIGQQ 180
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + ++ YI+E +I +V+ TGGD L L L+ +L L+ I HV +R
Sbjct: 181 -DSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQRI E LK+ P+YI H NHP E ++E+ A +LANAG+ L +Q+
Sbjct: 240 TRTLVTMPQRITDEFCNMLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQA 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GIN+D ++ L + +++R+KPYY+ GT HF ++++G +I+ L+
Sbjct: 299 VLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG+ P YI++ P G GK + + G + V +
Sbjct: 359 SGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKVIKMEDE 407
>gi|86359621|ref|YP_471513.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42]
gi|86283723|gb|ABC92786.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42]
Length = 349
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 201/345 (58%), Positives = 257/345 (74%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L ++ ++ Y+I LTP I LI+ +PNDPIARQF+P
Sbjct: 5 KPIKSVDDLVEAGLATPADRAALEAVTARYAITLTPEITRLIDRADPNDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELVVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + EAA YI +IWEVI TGGDPL+LS +RL++++K L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMEAAFDYIGSHQEIWEVILTGGDPLVLSPRRLREIMKALANISHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTMEARAACARLVDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GINDDP ILA+LM+ FVE R+KPYYLHHPDLA GT HFRLTIEEGQ+IVA+L+ +ISGLC
Sbjct: 245 GINDDPAILADLMKAFVENRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVAALRGQISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
QP YILD+PGG+GK + ++ G+G Y ++D+ H YPP
Sbjct: 305 QPTYILDIPGGHGKAVVSGSTVQATGDGCYSVSDYRGGEHSYPPA 349
>gi|222087704|ref|YP_002546241.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84]
gi|221725152|gb|ACM28308.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84]
Length = 350
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 200/346 (57%), Positives = 263/346 (76%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + + DL A LI + ++ ++ Y+IALTP +A LI+ +P DPIARQF+P
Sbjct: 5 RPIRTVDDLEQAGLIDSAEALSLEVVAERYAIALTPTVARLIDKADPADPIARQFVPDMA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPI D+ +SP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELVVTPEERADPISDHAYSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L +AA AYI++ +IWEVI TGGDPL+LS +RL+++L+ L I+HV+I+RFH+RVP
Sbjct: 125 LDGAALDAAFAYIRDHEEIWEVILTGGDPLVLSPRRLEEMLRQLADIEHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP +I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI+L+SQSVLLK
Sbjct: 185 VVDPLKIDGALIAALKASGKTVYVALHANHPRELTAEARAACARLVDAGIVLVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA+LM+ FVE RIKPYYLHHPDLA GTSHFRLTI EGQ IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLASLMKAFVETRIKPYYLHHPDLAPGTSHFRLTIAEGQAIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I ++++G G Y ++D+ H YPP+
Sbjct: 305 QPTYILDIPGGHGKADIGKSAVRELGEGCYSVSDYRGGEHLYPPEG 350
>gi|255656236|ref|ZP_05401645.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-23m63]
gi|296450329|ref|ZP_06892088.1| lysine 2,3-aminomutase [Clostridium difficile NAP08]
gi|296878741|ref|ZP_06902744.1| lysine 2,3-aminomutase [Clostridium difficile NAP07]
gi|296260822|gb|EFH07658.1| lysine 2,3-aminomutase [Clostridium difficile NAP08]
gi|296430248|gb|EFH16092.1| lysine 2,3-aminomutase [Clostridium difficile NAP07]
Length = 422
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 115/349 (32%), Positives = 186/349 (53%), Gaps = 4/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL ++ +T L + K++ + IKE+ + A++P +LI+P + DPI I
Sbjct: 63 QLSNR-ITDVDTLSKIITLTKKEKEHIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSI 121
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL +E DP+G+ +P I RYPDR+++ + + C +YCR C RR +G Q
Sbjct: 122 PTYIELED-EQEDLDPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIGQQ 180
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + ++ YI+E +I +V+ TGGD L L L+ +L L+ I HV +R
Sbjct: 181 -DSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQRI E LK+ P+YI H NHP E ++E+ A +LANAG+ L +Q+
Sbjct: 240 TRTLVTMPQRITDEFCNMLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQA 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GIN+D ++ L + +++R+KPYY+ GT HF ++++G +I+ L+
Sbjct: 299 VLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG+ P YI++ P G GK + + G + V +
Sbjct: 359 SGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKVIKMEDE 407
>gi|39935581|ref|NP_947857.1| hypothetical protein RPA2515 [Rhodopseudomonas palustris CGA009]
gi|39649434|emb|CAE27956.1| putative L-lysine 2,3-aminomutase [Rhodopseudomonas palustris
CGA009]
Length = 363
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 179/349 (51%), Positives = 244/349 (69%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP EE
Sbjct: 14 TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPSAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L
Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLAEIMAELAAIEHVKIVRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P+L++ L+ GK ++A+HANHP E + +A AA +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTGDARAACARIVDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ
Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK + + + + Y + D+ VH YPP S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGRDSRYRVADYCGEVHLYPPLS 362
>gi|78045085|ref|YP_361273.1| putative L-lysine 2,3-aminomutase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77997200|gb|ABB16099.1| putative L-lysine 2,3-aminomutase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 411
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 121/348 (34%), Positives = 202/348 (58%), Gaps = 4/348 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ +T+ + L + + + E++E+S Y A++P +LI+P +P+ I +Q I
Sbjct: 67 QLKNR-ITTPEVLRKILPLSDQVLWELEEVSKVYRFAISPYYLSLIDPDDPDCGIKKQSI 125
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ E DP+ + SP+ + RYPDR+++ + ++C +YCR C RR +G +
Sbjct: 126 PSILEVLDDTGE-LDPMNEAGTSPVAAVTRRYPDRLIINVTNMCGMYCRHCQRRRNIG-E 183
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + AL YI+E +I +V+ TGGD L+LS L +LK L I HV+I R
Sbjct: 184 VDRKTPREQIKEALLYIREHKEIRDVLITGGDALLLSDLELDWILKELSEIPHVEIKRIG 243
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ PQR+ L++ LK+ P+YI NHP E + EA A+ +L AG++L +Q+
Sbjct: 244 TRVPVTLPQRVTDNLVKILKKYP-PIYINTQFNHPREVTPEAKKAVDKLIEAGVVLGNQA 302
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND+P I+ L +++R++PYY+ GT HF IE+G +I+ SL+
Sbjct: 303 VLLKGVNDNPVIMEKLNHELLKIRVRPYYIFQAKRVRGTMHFVPKIEDGLRIMESLRGYT 362
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SGL P+YI++ PGG+GK+ + + ++ + + + YP
Sbjct: 363 SGLAVPYYIVNAPGGFGKIPLLPQYLIELSEEEAVLRNWEGRIIRYPN 410
>gi|300088094|ref|YP_003758616.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527827|gb|ADJ26295.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 431
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 198/349 (56%), Gaps = 4/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q RH+ +T+ ++L + + IK ++ + +A+TP +LINP + DPI RQ +
Sbjct: 52 QFRHR-ITTVEELSRYLPLSVRERTRIKLVTAEFPMAITPYYLSLINPADAKDPIRRQAV 110
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL REDP+ +++HS + G+VHRYPDR L+ L +CP+ CR C R+
Sbjct: 111 PSVHEL-TGEAGREDPLEEHSHSVVPGLVHRYPDRALMVLTDICPMLCRHCTRKREWRK- 168
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G V +S +A + YI Q+ ++I +GGDPL LS +RL++VL LR I HV+I+R
Sbjct: 169 GGWVQNSTRVKAMVDYIGRTPQVRDIIISGGDPLTLSTRRLEEVLAALRAIPHVEIIRIG 228
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+P+V PQRI+ EL + L + P+++ H NHP E + EA AA RL AG+ + +QS
Sbjct: 229 TRLPVVLPQRIDVELCRMLSKYS-PIWVNTHFNHPGEITPEAAAACDRLLRAGVQVNNQS 287
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND NL + + ++PYYL D GT H +E G +I+ ++
Sbjct: 288 VLLRGVNDTVATQLNLCHSLLRAMVRPYYLFQCDQVRGTEHLWTPVETGLRIIEGMRGHT 347
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P Y++DLP G GK+ + + + + ++ + +
Sbjct: 348 SGLAIPNYVIDLPDGRGKIPLSPNYVISHTKHELTVRNYEGHISHFANP 396
>gi|300863800|ref|ZP_07108726.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506]
gi|300338201|emb|CBN53872.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506]
Length = 384
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 121/349 (34%), Positives = 201/349 (57%), Gaps = 4/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+RH+ L+ + + + + +++A+TP A+L++P +P P+ Q +
Sbjct: 39 QMRHR-LSKLEHFQGLLKLTAAEQRGLSIAPEKFAVAVTPHFASLLDPEDPLCPLRLQVV 97
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P++EEL I + DP ++ SP+ G+VHRYPDR+LL L C YCR+C R +V SQ
Sbjct: 98 PKEEELTIDRADMVDPCSEDEDSPVPGLVHRYPDRVLLLALDTCAAYCRYCTRSRLV-SQ 156
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
++ +A +AY++E +++ +V+ +GGDPL++S + L +L+ LR I H++ +R
Sbjct: 157 GEMYPVTRRIDAIIAYLEEHTEVRDVLISGGDPLLMSDEPLDNLLRRLRAIPHIEFVRIG 216
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP PQRI PEL+ L++ V++++H H E + E A LA+ GI L SQ+
Sbjct: 217 SRVPSFLPQRITPELVAVLRKHR--VWLSLHFCHLRELTPEVAQACDLLADGGIPLGSQT 274
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L +L ++LR++PYYL+ D GT+H R +++ G +++ L+
Sbjct: 275 VLLKGVNDSEQALKDLFHGLLKLRVRPYYLYQCDPVIGTAHLRTSVQTGIDLISKLRGHT 334
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+G P Y++D PGG GKV I + NG + + + Y
Sbjct: 335 TGYAVPTYVIDAPGGGGKVPIQADTLIAYENGKTTVRNWEGKTYTYLDP 383
>gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040742|gb|ACT57538.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus
str. psy62]
Length = 352
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 352/352 (100%), Positives = 352/352 (100%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF
Sbjct: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS
Sbjct: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF
Sbjct: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ
Sbjct: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK
Sbjct: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS
Sbjct: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
>gi|217976642|ref|YP_002360789.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris
BL2]
gi|217502018|gb|ACK49427.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris
BL2]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 192/348 (55%), Positives = 249/348 (71%), Gaps = 1/348 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
LR KTL SA DL A L + EI+ + Y IA+TP IA LI+ PNDPIARQF+P
Sbjct: 13 LRAKTLRSADDLVEAGLASARRRAEIESVGETYPIAVTPAIAALIDRDAPNDPIARQFVP 72
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL+ PE+ DPIGD +SP++G+VHRYPDR+LLKLL VCPVYCRFCFRR+MVG K
Sbjct: 73 DIAELSPRPEDLADPIGDEAYSPVEGVVHRYPDRVLLKLLLVCPVYCRFCFRRDMVGPGK 132
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
LS + +AALAYI +IWEVI TGGDP LS +RL ++++ L I+HV+I+R H+
Sbjct: 133 SAHLSPEALDAALAYIAADPRIWEVILTGGDPFALSPRRLAEIMERLAAIEHVRIVRVHT 192
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP VDP I+ LI LK++GK +Y+A+HANHP E + EA AA +RL +AGI ++SQSV
Sbjct: 193 RVPCVDPDAIDAALIAALKKSGKTIYVALHANHPRELTSEARAACARLIDAGIPMVSQSV 252
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL G+NDD E L+ LMR FVE R+KPYYLHH DLA G +HFR+ IE+G++++ L+ ++S
Sbjct: 253 LLAGVNDDVETLSALMRGFVEARVKPYYLHHLDLAPGVAHFRVDIEKGRELMQQLRGRLS 312
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVG-NGSYCITDHHNIVHDYPP 349
GLCQP Y+LD+PGG+GK I I+ G NG + + D+ H YPP
Sbjct: 313 GLCQPAYMLDVPGGHGKSPIGPDFIEPAGANGVFRVRDYQGATHLYPP 360
>gi|209965785|ref|YP_002298700.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW]
gi|209959251|gb|ACI99887.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW]
Length = 353
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 174/343 (50%), Positives = 235/343 (68%), Gaps = 2/343 (0%)
Query: 6 KTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+TL S L +A L+ + ++ ++ ++ +++A+TP +A L++P +P DP+ARQF+P
Sbjct: 10 RTLRSPGALADAGLLPDDGRLPALEAVARRFAVAVTPAVAELVDPTDPADPVARQFLPDP 69
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL PEE DPIGD SP+KGIVHRY DR+LLK +H CPVYCRFCFRREMVG
Sbjct: 70 AELETRPEELADPIGDAPFSPVKGIVHRYRDRVLLKPVHTCPVYCRFCFRREMVGP-GAE 128
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L D +AAL YI + +IWEVI TGGDPLILS +RL +++ L I HV I+R HSRV
Sbjct: 129 TLDGADLDAALDYIAARPEIWEVILTGGDPLILSPRRLAEIVARLDAIPHVGIVRLHSRV 188
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+VDP+R+ EL+ L+ ++ +HANH E +EEA AAI+RL +AGI +LSQSVLL
Sbjct: 189 PVVDPERVTAELVAALRGRRLTTWVMLHANHWKELTEEARAAIARLVDAGIPMLSQSVLL 248
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KG+NDD E LA R V R+KP+YLH DLA GT+HFR T+ EGQ ++ +L+ +SGL
Sbjct: 249 KGVNDDVETLARTFRALVAARVKPHYLHQGDLAKGTAHFRTTVAEGQALMRALRGDVSGL 308
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
CQP Y+LD+PGG+GKV + + + G G + +TD H Y
Sbjct: 309 CQPTYVLDIPGGHGKVPLTPTHAEPDGAGGWTVTDPRGGRHPY 351
>gi|218682609|ref|ZP_03530210.1| lysine 2,3-aminomutase YodO family protein [Rhizobium etli CIAT
894]
Length = 350
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 194/346 (56%), Positives = 257/346 (74%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L ++E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPIKSVDDLVTAGLAAPADRAALEEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI+ +IWEVI TGGDPL+LS +RL+++++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIRGHQEIWEVILTGGDPLVLSPRRLREIMEALAEIAHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP +I+ I LK +GK VY+A+HANH E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVDPGKIDDASIAALKASGKTVYVALHANHVGELTAEARAACARLVDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ VE+R+KPYYLHHPDLA GT+HFRLT+EEGQ IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAGVEIRVKPYYLHHPDLAPGTAHFRLTLEEGQSIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGGYGK + ++ G G Y ++D+ H YPP +
Sbjct: 305 QPTYILDIPGGYGKAVVSASAVRARGEGCYSVSDYRGDEHCYPPAN 350
>gi|220921877|ref|YP_002497178.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
nodulans ORS 2060]
gi|219946483|gb|ACL56875.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
nodulans ORS 2060]
Length = 356
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 178/348 (51%), Positives = 244/348 (70%), Gaps = 3/348 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+ +TL L A L+ ++ E++ ++ Y++A+TP +A LI P D I RQF+P
Sbjct: 1 MSRRTLRDPAALAAAGLVPAARLPELERVAARYAVAVTPDMAELI--EAPEDGIGRQFLP 58
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EEL+ P ER DPIGDN H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG +
Sbjct: 59 SAEELDTAPGERADPIGDNAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPKG 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
L + +AALAYI + +IWEV+ TGGDP +L+ +RL+++ L ++HV++LR H+
Sbjct: 119 VGSLGEAELDAALAYIAARPEIWEVVVTGGDPFLLAPRRLERIAAALGGMEHVRVLRLHT 178
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+VDP R++ L+ LK G+ V++A+HANHP EF+ + AA++RL +AGI L+SQSV
Sbjct: 179 RVPVVDPARVDAALVAALKAFGRAVFVALHANHPREFTPASRAALARLVDAGIPLVSQSV 238
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+NDD E L LMR FVE R+KPYYLHH DLA GT HFR + EGQ ++ L+ ++S
Sbjct: 239 LLRGVNDDAETLGLLMRAFVENRVKPYYLHHGDLAPGTGHFRTGLAEGQALMRILRGRVS 298
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
GLCQP Y+LD+PGG+GKV + + G G + +TD H YPP+
Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPGYLAPRGAG-WTVTDPDGREHAYPPE 345
>gi|170738726|ref|YP_001767381.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp.
4-46]
gi|168193000|gb|ACA14947.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp.
4-46]
Length = 356
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 178/349 (51%), Positives = 244/349 (69%), Gaps = 3/349 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+ +TL L A L+ + + ++ +++ Y++A+TP +A+LI P D I RQF+P
Sbjct: 1 MSRRTLRDPASLVEAGLVPRAALPALERVASRYAVAVTPAMADLIET--PEDGIGRQFLP 58
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+ EEL+ P ER DPIGD H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG
Sbjct: 59 RAEELDAAPGERADPIGDAAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPDG 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
LS +AALAY+ + +IWEV+ TGGDP +LS +RL+++ L HV++LR H+
Sbjct: 119 MGALSEAQLDAALAYVAARPEIWEVVVTGGDPFLLSPRRLERIGAALAATDHVRVLRLHT 178
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP V+P+R++ L+ LK G+ V++A+HANHP EF+ A AAI+RL +AGI L+SQSV
Sbjct: 179 RVPAVEPERVDAALVAALKRFGRAVFVALHANHPGEFTPAARAAIARLVDAGIPLVSQSV 238
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+NDDPE LA LMR FVE R+KPYYLHH DLA GT HFR ++ GQ ++ L+ ++S
Sbjct: 239 LLRGVNDDPETLAALMRAFVENRVKPYYLHHGDLAPGTGHFRTSLPVGQALMRGLRGRVS 298
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
GLCQP Y+LD+PGG+GKV + ++ G + +TD H YPP+
Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPAYLEPR-PGGFTVTDPEGRAHAYPPEG 346
>gi|209551368|ref|YP_002283285.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209537124|gb|ACI57059.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 350
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 199/345 (57%), Positives = 259/345 (75%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K L SA DL A L+ ++E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL ILPEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELTILPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI+ +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRRLRDIMEALADIAHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP +++ L+ LK +GK VY+A+HANH E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTIEEGQ+IV+ L+ +ISGLC
Sbjct: 245 GVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
QP YILD+PGGYGK + ++ G+G Y ++D+ H YPP
Sbjct: 305 QPTYILDIPGGYGKTVVSGSTVQARGDGCYSVSDYRGDEHSYPPA 349
>gi|188586383|ref|YP_001917928.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351070|gb|ACB85340.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 412
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 110/348 (31%), Positives = 188/348 (54%), Gaps = 4/348 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ ++ + L + + + EI+++ Y A++P A+L++P +P P+ +Q I
Sbjct: 64 QLQNR-ISDVETLEKILNLTESERQEIEQVGKDYRWAVSPYYASLMDPDDPECPVRKQSI 122
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E+ DP+ + +P + RYPDR+++ + + C +YCR C R+ +G +
Sbjct: 123 PSAQEVKDKA-GVTDPMAEEFTNPAGNVTRRYPDRLIINVTNQCAMYCRHCQRKRNIG-E 180
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
E ++ Y++ ++I +V+ TGGD +LS + L +L LR I HV+I+R
Sbjct: 181 VDKPTPKDVLEESIEYVKNHAEIRDVLLTGGDAFMLSDETLDWLLTELRKIPHVEIIRLG 240
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+ PQRI L L + P+Y+ NHP E + EA A +LA AG+ L +Q+
Sbjct: 241 SRTPVTMPQRITQNLCDILTKH-LPLYVNTQYNHPKELTAEAKKATFKLARAGVGLGNQA 299
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL IN+DP ++ L ++ ++PYY+ H GT+HF +E+G +I+ ++
Sbjct: 300 VLLNTINNDPHVMKTLCHELLKGMVRPYYIFHAKKVKGTTHFNTRVEDGLEILEKMRGYT 359
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SG+ P YI++ P G+GK I + G I N V +YP
Sbjct: 360 SGMAIPSYIINAPDGHGKTPIVPEYMISQGRDKVYIRTWENRVFEYPN 407
>gi|190893895|ref|YP_001980437.1| L-lysine 2,3-aminomutase [Rhizobium etli CIAT 652]
gi|190699174|gb|ACE93259.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CIAT 652]
Length = 350
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 197/346 (56%), Positives = 259/346 (74%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + + DL A L + ++E++ Y+IALTPV+A LI+ +P+DPIARQF+P
Sbjct: 5 KPIKTVDDLLQARLATPDDRAMLEEVAARYAIALTPVMARLIDRADPDDPIARQFVPDPA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + ER DPIGD HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVATGERADPIGDYAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI + +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+R+P
Sbjct: 125 LDAAAMQAAFDYIADHQEIWEVILTGGDPLVLSPRRLRDIMEALAAIAHVKIVRFHTRIP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTGEARAACARLVDAGIAMISQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LMR FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMRAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I I+ G+G Y ++D+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYTVSDYRGGEHSYPPAG 350
>gi|332703220|ref|ZP_08423308.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus
str. Walvis Bay]
gi|332553369|gb|EGJ50413.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus
str. Walvis Bay]
Length = 430
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 123/345 (35%), Positives = 195/345 (56%), Gaps = 3/345 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+ + +TS QDL + + + + +A+TP +L + P++ + R +
Sbjct: 74 QLKSR-ITSYQDLGSMLALSEAEQAA-ANCGAPLPLAITPYYLSLFHDQGPDNGVRRSIV 131
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + P E EDP+G+++HSP+ G+VHRYPDR+L C YCR+C R VG +
Sbjct: 132 PTGFERLVNPGEAEDPLGEDHHSPVPGLVHRYPDRVLFLTTDYCAAYCRYCTRSRRVGKK 191
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + K +AA+ YI + +V+ +GGDPL +S L +L +R I HV+++R
Sbjct: 192 ACSSGNRKHWDAAIDYIARTPSVRDVLLSGGDPLTMSDAALDYLLGRIRAIPHVEVMRIG 251
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
++ P+V PQRI P+L + L+ P+ I++H HP E S E+ A RLA+AGI L SQ+
Sbjct: 252 TKAPMVLPQRITPQLTRVLRRY-HPLMISVHCTHPGELSPESAEAFKRLADAGIPLGSQT 310
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGINDD L +LM ++ R++PYYL+H D GT HFR ++ +G +++ L+
Sbjct: 311 VLLKGINDDVPTLKSLMHGLLKNRVRPYYLYHCDPVQGTGHFRTSVAKGVEMIEGLRGHT 370
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG P +++D PGG GK+ ++ I + +
Sbjct: 371 SGYAIPTFVVDAPGGGGKIPVNPDYIVGQDGDDLVLRNFEKKQFR 415
>gi|325293926|ref|YP_004279790.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3]
gi|325061779|gb|ADY65470.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3]
Length = 354
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 195/346 (56%), Positives = 262/346 (75%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + + L A LIK E +++++ ++ Y++A+T +A+L++ +P DPIARQF+P E
Sbjct: 6 TIKTPEALVEAGLIKTEALEDVRAVTQRYALAITSTMADLMDSRDPQDPIARQFVPDLVE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q ++
Sbjct: 66 LVHLPEERDDPIGDSAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGNGMM 125
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S ++ +AA YI+ IWEVI TGGDPL+LS +RL ++ L+ + HV+I+RFH+RVP+
Sbjct: 126 SPEELDAAFDYIKANPAIWEVILTGGDPLVLSARRLSDLMTRLKDVPHVKIVRFHTRVPV 185
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
VDP+RI+ LI+ LK +GK Y+A+HANH E + A +A +RL +AGI ++SQ+VLLKG
Sbjct: 186 VDPERIDGPLIESLKASGKTTYVALHANHARELGQAARSACARLIDAGIAMVSQTVLLKG 245
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD ILA LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+ +SGLCQ
Sbjct: 246 INDDSAILAELMRAFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRGHVSGLCQ 305
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P Y+LD+PGG+GK I + +K +G Y I+D + H YPP +S
Sbjct: 306 PTYVLDIPGGHGKATIGPNAAEKTRDGCYSISDFNGNDHIYPPPAS 351
>gi|218674354|ref|ZP_03524023.1| L-lysine 2,3-aminomutase protein [Rhizobium etli GR56]
Length = 350
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 197/346 (56%), Positives = 256/346 (73%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K L S DL A L + E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPLKSVDDLLQAGLATLGDRAMLDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVAPEERADPIGDHTHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + + A YI +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+R+P
Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRIP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIDALKASGKTVYVALHANHPSELTSEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I I+ G+G Y ++D+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYSVSDYRGGEHFYPPAG 350
>gi|86750071|ref|YP_486567.1| hypothetical protein RPB_2954 [Rhodopseudomonas palustris HaA2]
gi|86573099|gb|ABD07656.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris HaA2]
Length = 363
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 185/349 (53%), Positives = 250/349 (71%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L E D++++++ Y+IA+TP +A LI+P++P+DPIARQ+IP+ +E
Sbjct: 14 TLRQPSELIAQGLAPAESRDDLEQVAARYAIAVTPDVAALIDPNDPHDPIARQYIPRADE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L LP ER+DPIGD H+P++GIVHR+ DR+LLKL+HVC VYCRFCFRRE +G K L
Sbjct: 74 LVTLPIERDDPIGDGAHAPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRRETIGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +R+ +++ L I HV+I+RFH+RVP+
Sbjct: 134 SREATAAALDYIRAHPEIWEVIFTGGDPLMLSPRRMAEIMAELATIAHVKIIRFHTRVPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI PEL++ L+ GK ++A+HANHP E + A AA + L +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPELVRALQTPGKTTWVALHANHPRELTAAARAACAMLIDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT+H R TI EGQ ++ +L+ ++SGLCQ
Sbjct: 254 VNDDSETLEALMRGFVECRIKPYYLHHGDLAPGTAHLRTTIAEGQALMRALRGRVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK I + + + Y + D+ VH YPP S
Sbjct: 314 PEYVLDIPGGYGKAPIGPNYLTGEDGTVADSRYRVRDYCGDVHLYPPGS 362
>gi|291286722|ref|YP_003503538.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
gi|290883882|gb|ADD67582.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 393
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 115/349 (32%), Positives = 198/349 (56%), Gaps = 4/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + L S +D+ + + + + S A+TP A+L+ + D + R I
Sbjct: 47 QLAN-ILRSREDVEKIVKLSESEACAFETCSG-LPFAVTPYYASLLTGTSSCDAVRRTVI 104
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ E +DP+G+++ SP+ G+VHRYPDR+L + C YCR+C R +G
Sbjct: 105 PTHMEMIKGRGEADDPLGEDSCSPVDGLVHRYPDRVLFLVTEHCSTYCRYCTRSRKMGEI 164
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + A+ YI+ Q+ +V+ +GGDPL+L ++ +L++L I+HV+++R
Sbjct: 165 HSGNI-KERWQKAIDYIKATPQVRDVLISGGDPLVLPDASIKWLLESLSAIEHVEMIRIG 223
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
++ P+V PQRI LI+ LK + +P++++IH HP E + E + A + LA+AGI L SQ+
Sbjct: 224 TKAPVVLPQRITKSLIKILK-SVRPLFMSIHFTHPDELTAETVQACNMLADAGIPLGSQT 282
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L L +++R++PYYL+ D +G+ HFR +E G ++ L+
Sbjct: 283 VLLKGVNDSVDTLKGLYHGLLKVRVRPYYLYQCDPISGSGHFRTKVETGLNMIKGLRGHT 342
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+G P Y++D PGG GK+ + + G + ++ + YP +
Sbjct: 343 TGYAIPNYVIDAPGGGGKIPLIPDYFQGKSEGQIMLKNYQGNTYLYPDE 391
>gi|297569348|ref|YP_003690692.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296925263|gb|ADH86073.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 360
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 134/350 (38%), Positives = 202/350 (57%), Gaps = 9/350 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L ++T Q L + + +K ++ Y + + P +LIN P DPI RQ +
Sbjct: 18 RLLAASITCPQALADRFGLDP---APLKAVTARYPLRINPYYLSLINQ--PGDPIWRQAV 72
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL DP+G+ ++SP+ G+VH+Y DR LL + C +YCRFC R+ VG++
Sbjct: 73 PDVRELEDT-VCPADPLGEEDYSPVPGLVHKYRDRALLLVTGQCAMYCRFCTRKRKVGTR 131
Query: 122 KGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ S+ +AALAY+++ I +V+ +GGDPL+L RL +L LR I+H++I+R
Sbjct: 132 EMAAAGSAAQLDAALAYLEQTPAIHDVLISGGDPLLLPDGRLIPLLTRLRRIRHLEIIRL 191
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SRVP PQR+ +L LK+ P++I H NHP E + EA A RLA+AGI L +Q
Sbjct: 192 GSRVPCTLPQRVTLKLAAALKKF-HPLFINTHFNHPREITPEAARACQRLADAGIPLGNQ 250
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+NDD + LMR +++R+KPYYL DL+ GT HFR +E+G I+ L
Sbjct: 251 TVLLKGVNDDAATIRELMRGLLKIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGH 310
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P + LD P G GK+ + ++ +G+ T++ + YP
Sbjct: 311 TSGLATPTFALDAPEGRGKIPLTPDYLQSLGD-KLIFTNYQGLPCQYPNP 359
>gi|206603974|gb|EDZ40454.1| Lysine 2,3-aminomutase [Leptospirillum sp. Group II '5-way CG']
Length = 383
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 122/322 (37%), Positives = 193/322 (59%), Gaps = 6/322 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
E+ + + + +LI +P PI RQ IP EE+ DP+G+++ SP+ I
Sbjct: 33 EVEKTFPVRINAYYRSLI--TDPEGPIGRQVIPDPEEVLDFDS-PVDPLGEDSDSPVPAI 89
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
VHRYPDR+L + + CP+YCR+C R+ M+G+ +G V++ + E + YI+ ++ +VI
Sbjct: 90 VHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEG-VVTRSEVEEGIEYIRTHPEVRDVIL 148
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+L L+ +L LR I H++I+R SRVP PQR+ PEL LK+ P+++
Sbjct: 149 SGGDPLMLKDDYLEFILSGLRKIPHLEIIRIGSRVPSSLPQRVTPELCAMLKKY-HPLFM 207
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
+H NHP E + E+ A + LA+AGI L Q+VL+KG+ND+ IL L + + +R+KPY
Sbjct: 208 NLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKLLTIRVKPY 267
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID-THNIK 328
YL+ DL G +HFR + G +I+ L+ SG+ P +++D PGG GKV I +
Sbjct: 268 YLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVPILPPDYLV 327
Query: 329 KVGNGSYCITDHHNIVHDYPPK 350
+ +G + ++ V+ YP
Sbjct: 328 SMEDGDVVLRNYEGNVYTYPDA 349
>gi|302872649|ref|YP_003841285.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575508|gb|ADL43299.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 406
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 128/345 (37%), Positives = 211/345 (61%), Gaps = 5/345 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +P+ PI +Q +
Sbjct: 64 QLKN-MITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPSCPIKKQSV 122
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G +
Sbjct: 123 PSSLELIE--KGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG-E 179
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 180 TDTHASLDDITDAIEYVAKNPHIRDVLITGGDALLLSDEILEWILRSLRQIPHVEIIRIG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A L++AG+ L +Q
Sbjct: 240 TRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLSDAGVPLGNQM 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+N+D I+ L + +++R+KPYY+ HP GTSHF + IEEG +I+ SL+ +
Sbjct: 299 VLLNGVNNDKYIVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVAIEEGIEIIESLRGRT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + VG + + V +
Sbjct: 359 SGMAVPTYIVNAPKGKGKTPILPNYLLYVGKDKVVLRNWEGEVFE 403
>gi|227824114|ref|YP_002828087.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii
NGR234]
gi|227343116|gb|ACP27334.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii
NGR234]
Length = 350
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 210/347 (60%), Positives = 266/347 (76%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
H+ L +A DL A LI + I +++ Y+IA++PV+ANLI+ +P DPI+RQF+P
Sbjct: 4 HRPLRTAGDLVEAGLIDASAEEAIARVASRYAIAISPVVANLIDRTDPQDPISRQFVPDA 63
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL + PEER DPIGD HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 64 AELTLTPEERADPIGDGAHSPVSGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLG 123
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L+ + +AA+AYI E +IWEVI TGGDPL+LS +RLQ++L+ L I HV+++RFH+RV
Sbjct: 124 TLTPSELDAAIAYISEHPEIWEVILTGGDPLVLSPRRLQEILERLDAIAHVKVVRFHTRV 183
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V+P RI+ +LI LK +GK Y+A+HANHP E + EA AA +RL +AGI+++SQSVLL
Sbjct: 184 PVVEPHRIDADLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLL 243
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KG+NDDPE+LA LMR FVE RIKPYYLHHPDLA GTSHFRLTIE+GQ +VASL+ ++SGL
Sbjct: 244 KGVNDDPEVLAELMRAFVETRIKPYYLHHPDLAPGTSHFRLTIEKGQALVASLRGRVSGL 303
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
CQP YILD+PGG+GK I I+ G G Y +TD H H YPPKS
Sbjct: 304 CQPTYILDIPGGHGKAVISASAIEAEGGGCYTVTDFHGNEHAYPPKS 350
>gi|170749147|ref|YP_001755407.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
radiotolerans JCM 2831]
gi|170655669|gb|ACB24724.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
radiotolerans JCM 2831]
Length = 347
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 1/347 (0%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
++ L SA DL +A LI + D + + Y++++TP +A LI+P +P+DPI RQF+P+
Sbjct: 2 NRALRSADDLLSAGLISGAEADALGAVLARYAVSVTPDMAELIDPQDPDDPIGRQFVPRV 61
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E PEER DPIGD H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRREMVG
Sbjct: 62 AEAVATPEERADPIGDAAHAPVTGIVHRYPDRVLLKPLHVCPVYCRFCFRREMVGPDGLG 121
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L+ + +AALAYI + +IWEV+ TGGDP LS +RL + + L I HV+++R H+RV
Sbjct: 122 TLTDAELDAALAYIAQDPRIWEVVLTGGDPFALSPRRLGVIAERLAAIAHVRVMRVHTRV 181
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P ++ L++ LK G+ V++A+HANHP EF+ A AA +RL +AGI L+ QSVLL
Sbjct: 182 PVVKPDLVSDALVRALKRFGRAVFVAVHANHPREFTAAASAACARLVDAGIPLVGQSVLL 241
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND+ L LMRT VE RIKPYYLHH DLA GT+H R + EGQ ++ +L+ ++SGL
Sbjct: 242 RGVNDEAATLEALMRTLVENRIKPYYLHHGDLAPGTAHLRTDVAEGQALMRALRGRLSGL 301
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GKV I ++ +G +TD H YPPK+
Sbjct: 302 AQPTYVLDIPGGHGKVPIGPGYLRDTPDG-VRVTDPGGQDHAYPPKA 347
>gi|258513920|ref|YP_003190142.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257777625|gb|ACV61519.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 432
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 201/346 (58%), Gaps = 5/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ H+ + + L + + +E+ +I+++ + +++P A+LI P + NDP+ Q +
Sbjct: 75 QISHR-INDVELLSSLIQLSEERCAQIRKVGLKFRWSVSPYYASLIVPDSLNDPVMLQSV 133
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL++ DP+ + SP I RYPDR+++ + + C +YCR C RR +G
Sbjct: 134 PSIKELDVS--GYADPMAEELTSPAPCITRRYPDRLIINVTNKCAMYCRHCQRRRGIG-D 190
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ +D AAL YI++ +I +V+ TGGD L+LS K++ +L L IKHV+I R
Sbjct: 191 VDRHQTHQDLLAALDYIRKNKEIRDVLITGGDALLLSDKKIDWLLSELDSIKHVEIKRLG 250
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQRI PEL + LK+ PVYI NHP E + E+ A L +AG++L +Q+
Sbjct: 251 TRTIVTLPQRITPELCEVLKQHP-PVYINTQFNHPQEITPESKLACDMLVSAGVVLGNQA 309
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIN++P ++ L + +++R++PYY+ H GT HF ++ EG +I+ L+
Sbjct: 310 VLLKGINNNPHVMKKLNQELLKIRVRPYYIFHAKQVIGTRHFITSVNEGIEIMEKLRGYT 369
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P YI++ P GYGK+ I + + N S + + N DY
Sbjct: 370 SGLAVPTYIINAPNGYGKIPILPKYLLGIDNSSVRLRNWENRQIDY 415
>gi|116332642|ref|YP_802359.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116127509|gb|ABJ77601.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 370
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 129/346 (37%), Positives = 193/346 (55%), Gaps = 4/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + L + +++ + S + ++TP NL + +PN PI Q +
Sbjct: 25 QIQNR-IKTQTQLSEHIELTEKETLSFEACSEFFEFSVTPYYLNLADTKDPNCPIRLQIV 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P + EL ER+DP+ + H P+KG+ HRYPDR L L HVC VYCRFC R+ V
Sbjct: 84 PHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSKS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T ++ + AL Y + +I EVI +GGDPL LS ++L +L L+ I H+ +R H
Sbjct: 144 VHT-PGKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRIH 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQ 240
SR P+ P RI+ L K+ P+Y+ H NHP E + IS L G +I+L+Q
Sbjct: 203 SRYPVTLPMRIDSSLCSVFKKH-FPIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLNQ 261
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND E L L + IKPYYLH D G+ FR+ IE G +I+ ++ +
Sbjct: 262 SVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRGR 321
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
ISGL P Y++DL GG GKV + T + + SY ++ + +++
Sbjct: 322 ISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYIFRNYQDELYE 367
>gi|116329760|ref|YP_799479.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116122653|gb|ABJ80546.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 370
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 129/346 (37%), Positives = 194/346 (56%), Gaps = 4/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + L + +++ + S + ++TP NL + +PN PI Q +
Sbjct: 25 QIQNR-IKTQTQLSEHIELTEKETLSFEACSEFFEFSVTPYYLNLADTKDPNCPIRLQIV 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P + EL ER+DP+ + H P+KG+ HRYPDR L L HVC VYCRFC R+ V
Sbjct: 84 PHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSKS 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T ++ + AL Y + +I EVI +GGDPL LS ++L +L L+ I H+ +R H
Sbjct: 144 VHT-PGKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRIH 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQ 240
SR P+ P RI+ L K+ P+Y+ H NHP E + IS L G +I+L+Q
Sbjct: 203 SRYPVTLPMRIDSSLCSVFKKH-FPIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLNQ 261
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND E L L + IKPYYLH D G+ FR+ IE G +I+ ++ +
Sbjct: 262 SVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRGR 321
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
ISGL P Y++DL GG GKV + T + + SY + ++ + +++
Sbjct: 322 ISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYILRNYQDELYE 367
>gi|218461424|ref|ZP_03501515.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Kim 5]
Length = 350
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 195/346 (56%), Positives = 256/346 (73%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K L + DL A L+ + E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPLKNVDDLLQAGLVLPGHRAILDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + + A YI +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDLALIAALKASGKTVYVALHANHPRELTSEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I ++ G+G Y ++D+ H YP
Sbjct: 305 QPAYILDIPGGHGKAVISESVVRATGDGCYSVSDYRGGEHSYPTAG 350
>gi|192291173|ref|YP_001991778.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris TIE-1]
gi|192284922|gb|ACF01303.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris TIE-1]
Length = 363
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 180/349 (51%), Positives = 246/349 (70%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP+ EE
Sbjct: 14 TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPRAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L
Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P+L++ L+ GK ++A+HANHP E +E A AA +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTEAARAACARIIDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ
Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK + + + + Y + D+ VH YPP+S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGADSRYRVADYCGEVHLYPPQS 362
>gi|240139757|ref|YP_002964234.1| putative aminomutase, putative kamA and yjeK-like protein
[Methylobacterium extorquens AM1]
gi|240009731|gb|ACS40957.1| putative aminomutase, putative kamA and yjeK-like protein
[Methylobacterium extorquens AM1]
Length = 353
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 176/345 (51%), Positives = 236/345 (68%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + ++ ++ Y++++T +A LI+ ++P+DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDTHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI +IWEV+ TGGDP LS +RL + L I HV++LRFH+RVP+
Sbjct: 124 SEVELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITDALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + + S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDA-ADESWRVTDPSGAVHAYPPES 347
>gi|154247831|ref|YP_001418789.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter
autotrophicus Py2]
gi|154161916|gb|ABS69132.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter
autotrophicus Py2]
Length = 362
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 172/344 (50%), Positives = 233/344 (67%), Gaps = 1/344 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL S DL A L D + ++ Y++A+TP + + I+ +P DPIARQF+P E
Sbjct: 19 TLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAIDRTDPADPIARQFVPHPAE 78
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + PEE DPIGD HSP+ GIVHRY DR LLK++ VC VYCRFCFRREMVG L
Sbjct: 79 LEVRPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVYCRFCFRREMVGPGAAATL 138
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + E A AY+ +IWEVI TGGDP +LS +R+ +V+ L I HV+I+RFH+RVPI
Sbjct: 139 SPEALERAFAYLSAHPEIWEVILTGGDPFMLSPRRMGEVMARLAAIAHVKIVRFHTRVPI 198
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P+R++ LI LK G Y+A+H NH E + +A +A++R+A+AGI LLSQSVLL+G
Sbjct: 199 AAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALARMADAGIPLLSQSVLLRG 258
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LA L R+ VE R+KPYYLHHPDLA GT+HFRL I GQ+++ +L+ ++SG+
Sbjct: 259 VNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIARGQELMRALRGRLSGIAL 318
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
P Y+LD+PGG GKV + +I G ++D+ VH YPP+
Sbjct: 319 PTYVLDIPGGAGKVPLTPGHIAPAGT-RLAVSDNCGGVHLYPPE 361
>gi|124514855|gb|EAY56366.1| Lysine 2,3-aminomutase [Leptospirillum rubarum]
Length = 383
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 122/323 (37%), Positives = 194/323 (60%), Gaps = 6/323 (1%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
+E+ + I + +LI +P PI RQ IP EE+ DP+G+++ SP+
Sbjct: 32 REVEKTFPIRINAYYRSLI--TDPEGPIGRQVIPDPEEVLDFDS-PVDPLGEDSDSPVPA 88
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
IVHRYPDR+L + + CP+YCR+C R+ M+G+ +G V++ + E + YI+ ++ +VI
Sbjct: 89 IVHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEG-VVTRGEVEEGIEYIRTHPEVRDVI 147
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+GGDPL+L L+ +L LR I H++++R SRVP PQR+ PEL LK+ P++
Sbjct: 148 LSGGDPLMLKDDYLEFILSGLRKIPHLEVIRIGSRVPSSLPQRVTPELCAMLKKY-HPLF 206
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ +H NHP E + E+ A + LA+AGI L Q+VL+KG+ND+ IL L + + +R+KP
Sbjct: 207 MNLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKLLTIRVKP 266
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID-THNI 327
YYL+ DL G +HFR + G +I+ L+ SG+ P +++D PGG GKV I +
Sbjct: 267 YYLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVPILPPDYL 326
Query: 328 KKVGNGSYCITDHHNIVHDYPPK 350
+ +G + ++ V+ YP
Sbjct: 327 VSMEDGDVVLRNYEGNVYTYPDA 349
>gi|163852420|ref|YP_001640463.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
extorquens PA1]
gi|163664025|gb|ABY31392.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
extorquens PA1]
Length = 353
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 175/345 (50%), Positives = 234/345 (67%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + ++ ++ Y++++T +A LI+ +P+DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAAALPTLERVAARYAVSVTADMAELIDASDPDDPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDAHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + A YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAVAYRYIAAHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARGAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + G S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAAGE-SWRVTDPSGAVHAYPPES 347
>gi|218531178|ref|YP_002421994.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
chloromethanicum CM4]
gi|218523481|gb|ACK84066.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
chloromethanicum CM4]
Length = 353
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 174/345 (50%), Positives = 236/345 (68%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + ++ ++ Y++++T +A LI+ ++P+DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + GIVHRY DR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDAHEAVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AAI++L +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT H R + +GQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + G S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPSYLDAAGE-SWRVTDPSGAVHAYPPES 347
>gi|24217359|ref|NP_714842.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
gi|24202437|gb|AAN51857.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
Length = 365
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 131/346 (37%), Positives = 193/346 (55%), Gaps = 4/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + L + +++I + S + ++TP L +P +PN PI Q +
Sbjct: 20 QIQNR-IKTRTHLSEFLELSEKEILSFEACSQFFEFSVTPYYLGLADPKDPNCPIRLQIV 78
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EEL E++DP+ + P+KG+ HRYPDR L L HVC VYCRFC R+ V
Sbjct: 79 PHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSKS 138
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T +D + AL Y +I EVI +GGDPL LS +L +LK L+ I H+ +R H
Sbjct: 139 SHT-PGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRIH 197
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQ 240
SR P+ P RI+ L LK P+YI H NHP E + IS L G ++L+Q
Sbjct: 198 SRYPVTLPMRIDSSLCAVLKRH-FPIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLNQ 256
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKGIND E L L + IKPYYLH D G+ FR+ IE+G +I+ ++ +
Sbjct: 257 GVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRGR 316
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
ISGL P Y++DL GG GKV + T + + + SY ++ + +++
Sbjct: 317 ISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYRDELYE 362
>gi|256829555|ref|YP_003158283.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
gi|256578731|gb|ACU89867.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
Length = 411
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 191/348 (54%), Gaps = 9/348 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+H+ +TS Q + + ++ A TP + + + + R +
Sbjct: 61 QLKHR-VTSVQAMAGILGVDA---PVFEKSRRRLPAAATPYYLWVASRS---EALRRCIL 113
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E +LP E DP+G+ HSP+ GIVHRYPDR+L + C YCR+C R +VG
Sbjct: 114 PDVRETQVLPFETSDPLGEEGHSPVPGIVHRYPDRVLFLVTEFCSTYCRYCTRSRLVGK- 172
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + + AL YI++ ++ +V+ +GGDPL L +++ +L LR I HV+I+R
Sbjct: 173 AGHRSDMRSWQVALDYIRQHDEVRDVLLSGGDPLTLPAMKIEWLLSQLRAIPHVEIVRIG 232
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
S+VP V PQRI P L++ L+ P++I++H HP E + + A +RLA+ GI L SQ+
Sbjct: 233 SKVPAVLPQRITPNLVRMLRRY-HPLFISLHFTHPDEITPDTALACNRLADGGIPLGSQT 291
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+NDD E + LM V R++PYY++ D G+SHFR ++ G I+ L+
Sbjct: 292 VLLSGVNDDVETMKRLMHGLVRNRVRPYYMYQCDPIPGSSHFRTPVDTGLSIIQGLRGHT 351
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SG C P Y++D PGG GKV + + + ++ + + YP
Sbjct: 352 SGYCIPTYVIDAPGGGGKVPLQPGYFQGRDEQGVVLRNYEDRIFHYPD 399
>gi|15964028|ref|NP_384381.1| hypothetical protein SMc00355 [Sinorhizobium meliloti 1021]
gi|307301174|ref|ZP_07580936.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
BL225C]
gi|307321075|ref|ZP_07600480.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
gi|15073204|emb|CAC41712.1| Lysine 2,3-aminomutase [Sinorhizobium meliloti 1021]
gi|306893247|gb|EFN24028.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
gi|306903630|gb|EFN34217.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
BL225C]
Length = 350
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 199/346 (57%), Positives = 264/346 (76%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + +A++L +A L+ +EQ + I +++ Y++A++P IA L++ +PNDPIARQF+P
Sbjct: 5 RAIRTARELADAGLVGREQEEAISRVASRYAVAISPTIARLVDRDDPNDPIARQFVPDMA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL ++PEER DPIGD HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG +
Sbjct: 65 ELTLMPEERADPIGDGAHSPVAGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ + +AALAYI + +IWEVI TGGDPL+LS +RL ++ L I HV+++RFH+RVP
Sbjct: 125 LTPAELDAALAYIAGRPEIWEVILTGGDPLVLSPRRLGDIMVRLAEIDHVKVVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V+P R++ LI LK +GK Y+A+HANHP E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVEPDRVDAGLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LMR FVE RIKPYYLHHPDLA GT HFRL+IEEGQ +VASL+ ++SGLC
Sbjct: 245 GVNDDPDVLAALMRAFVETRIKPYYLHHPDLAPGTGHFRLSIEEGQALVASLRGRVSGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK + I+ G G Y +TD HDYPPK
Sbjct: 305 QPAYILDIPGGHGKAVVSAGAIEAEGGGCYTVTDFRGNRHDYPPKG 350
>gi|27379499|ref|NP_771028.1| hypothetical protein blr4388 [Bradyrhizobium japonicum USDA 110]
gi|27352651|dbj|BAC49653.1| blr4388 [Bradyrhizobium japonicum USDA 110]
Length = 364
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 171/357 (47%), Positives = 240/357 (67%), Gaps = 11/357 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL +L +L + ++ ++ Y++A+TP + LI+ +P+DPIARQF+P
Sbjct: 8 RTLREPAELVAEHLAPAAALPALERVAARYAVAITPALVELIDTSDPDDPIARQFVPTAA 67
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + P E DPIGD+ HSP+ GIVHRYPDR+L KL+HVC VYCRFCFRREMVG K
Sbjct: 68 ELEMQPGESADPIGDHPHSPVPGIVHRYPDRVLFKLVHVCAVYCRFCFRREMVGPGKDNA 127
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS AA+ YI+ +IWEVI TGGDPL+LS +R+ +++ L I HV+I+R H+RVP
Sbjct: 128 LSDSAYRAAVDYIRAHDEIWEVILTGGDPLMLSPRRMSEIMADLAGIDHVKIIRLHTRVP 187
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP R++ E++ LK AG ++A+HANH E +E A AA +RL +AGI ++SQSVLL+
Sbjct: 188 VADPARVSDEMVAALKVAGATTWVALHANHARELTEGARAACARLVDAGIPMVSQSVLLR 247
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ L++LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ+++ L+ ++SGLC
Sbjct: 248 GVNDNVTALSDLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQELMRQLRGRVSGLC 307
Query: 306 QPFYILDLPGGYGKVKIDTHNI-----------KKVGNGSYCITDHHNIVHDYPPKS 351
QP Y++D+PGG GK + + + + Y I D+ VH YPP++
Sbjct: 308 QPDYVIDIPGGAGKSPVGPNYVLAAQNTAPDAREAATETRYRIVDYCGDVHLYPPET 364
>gi|163782523|ref|ZP_02177520.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882096|gb|EDP75603.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1]
Length = 378
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 212/347 (61%), Gaps = 4/347 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + S ++L + +E+++ I+ Y +A+TP +L++P + DPI Q I
Sbjct: 29 QIRNR-IKSLEELQRYVRLTEEEVEGIRLTQGLYPLAITPYYLSLMDPDDTEDPIRLQAI 87
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P++ E++ + +P + G+ HRYPDR+L+ + C VYCR C R+ + ++
Sbjct: 88 PRRIEVDEEAQSAGEPDALREEGDIPGLTHRYPDRVLMSVTTFCAVYCRHCMRKRIF-AE 146
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ ++ + L+YI+E ++ +V+ +GG+PL LS+++++ +LK LR IKHV+I+RF
Sbjct: 147 GERARTKEEIDRMLSYIREHEEVRDVLISGGEPLSLSNEKIEYILKGLREIKHVEIVRFG 206
Query: 182 SRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R+P++ PQR + EL+ L++ P++I H NHP E +E A A+ RL GI + +Q
Sbjct: 207 TRLPVLAPQRFFDEELLSILEKYS-PIWINTHFNHPKEVTELAEEAVDRLLRHGIPVNNQ 265
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+ND+PEI+ +L R + +++KP YL H D G HFR T+++G +I+ L+ K
Sbjct: 266 TVLLKGVNDNPEIMLSLFRKLLRIKVKPQYLFHCDPIRGAVHFRTTVDKGLEIMRFLRGK 325
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
ISG+ P Y +DLPGG GKV + + + S+ + +Y
Sbjct: 326 ISGMGIPTYAVDLPGGKGKVPLQPNYVVGREGNSFLFESFTGELVEY 372
>gi|320161902|ref|YP_004175127.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1]
gi|319995756|dbj|BAJ64527.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1]
Length = 446
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 122/349 (34%), Positives = 197/349 (56%), Gaps = 4/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL H+ L S +D + + + + + + +TP +LINP +P+DPI +Q I
Sbjct: 29 QLSHR-LNSVEDFEQVLRLTESERKAL-TTQGLFRVDITPYFVSLINPDDPDDPIRKQVI 86
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ EE+ ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG
Sbjct: 87 PRAEEIVPFTGMMEDSLAEDRHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVG-D 145
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + E + Y++ Q+ +V+ +GGDPL L+ K L+++L LR I+H++I+R
Sbjct: 146 PSATFSRAEFEMQIEYLKRTPQVRDVLLSGGDPLTLAPKLLEELLSRLREIEHIEIIRIG 205
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP+ PQRI E + + PV++ IH NHP E ++E A RL AG+ L +QS
Sbjct: 206 SRVPVFLPQRITQEFCDMVSKY-HPVWMNIHVNHPNEITQELADACDRLTRAGVPLGNQS 264
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+ND + L++ V +R++PYYL+ DL G HFR + +G +I+ L+
Sbjct: 265 VLLAGVNDCVHVQRKLVQDLVRIRVRPYYLYQCDLVEGAGHFRTPVAKGIEIIEGLRGHT 324
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ + + + + + + ++ + Y
Sbjct: 325 SGYAVPTYVVDAPGGGGKIPVMPNYLISMSDHKIILRNYEGYITTYEEP 373
>gi|45655809|ref|YP_003618.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45602780|gb|AAS72255.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 365
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 131/346 (37%), Positives = 193/346 (55%), Gaps = 4/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + L + +++I + S + ++TP L P +PN PI Q +
Sbjct: 20 QIQNR-IKTRTHLSEFLELSEKEILSFEACSQFFEFSVTPYYLGLAAPKDPNCPIRLQIV 78
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EEL E++DP+ + P+KG+ HRYPDR+L L HVC VYCRFC R+ V
Sbjct: 79 PHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRVLWYLSHVCAVYCRFCTRKRKVSKS 138
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T +D + AL Y +I EVI +GGDPL LS +L +LK L+ I H+ +R H
Sbjct: 139 SHT-PGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRIH 197
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQ 240
SR P+ P RI+ L LK P+YI H NHP E + IS L G ++L+Q
Sbjct: 198 SRYPVTLPMRIDSSLCAVLKRH-FPIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLNQ 256
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKGIND E L L + IKPYYLH D G+ FR+ IE+G +I+ ++ +
Sbjct: 257 GVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRGR 316
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
ISGL P Y++DL GG GKV + T + + + SY ++ + +++
Sbjct: 317 ISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYQDELYE 362
>gi|83814229|ref|YP_445259.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM
13855]
gi|83755623|gb|ABC43736.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM
13855]
Length = 401
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 117/349 (33%), Positives = 191/349 (54%), Gaps = 5/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + SA+ L ++ IK + + +TP A+L+ P +P+ P+ RQ +
Sbjct: 22 QMQNR-IHSAEALRKWIRPTDDERAAIKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQAV 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + DP+ + H P+K ++H Y DR+ + C +YCR+C R+ MVG
Sbjct: 81 PTMDEFGPDIVDELDPLDETGHEPVKNLIHNYEDRVAFCVTAECAIYCRYCLRKRMVG-D 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + +AA+ YI +I +V+ TGGDPL + L+ +L LR I HV+++RF
Sbjct: 140 AEYFMRTDEHQAAIDYIAAHDEIRDVLLTGGDPLTFNEANLEWLLSRLRAIDHVELIRFG 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+ P RI +L L + P++I H NHP E + +A AAI RL +AGI + +Q+
Sbjct: 200 SRMPVKLPYRITDDLCDLLAQY-HPLWINTHFNHPKECTGDAAAAIGRLKDAGIPVGNQT 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+NDDP+ + L V +R++PYYL+ + GT H R IE G I+ L+ +
Sbjct: 259 VLLRGVNDDPDTMKALNEGLVRMRVRPYYLYQAQIIGGTGHLRTPIEVGMHIMRQLRGRT 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y+LD P GKV ++ +K + + + P
Sbjct: 319 SGFAIPDYVLDTPH--GKVPLNRSYVKGRAGDHVLMESYDGTLWAEPNP 365
>gi|188582434|ref|YP_001925879.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi
BJ001]
gi|179345932|gb|ACB81344.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi
BJ001]
Length = 353
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 173/343 (50%), Positives = 240/343 (69%), Gaps = 1/343 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L S L A L+ E + ++ ++ Y++++T +A LI+ +P+DPIARQF+P+ EE
Sbjct: 4 ALKSTTALARAGLLPAEALPALERVAARYAVSVTADMAELIDRDDPHDPIARQFVPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ EER DPIGD+ H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG L
Sbjct: 64 IETRVEERADPIGDDAHAPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPAGHGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI + +IWEV+ TGGDP LS +RL ++ TL I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAFRYIADHPEIWEVVVTGGDPFALSPRRLGEIATTLGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ +++ LK+ V++A+HANHP EF+ A AAI+RL +AG+ ++SQSVLL+G
Sbjct: 184 VEPARVDADVVAALKKFPGAVFVALHANHPREFTPAARAAIARLVDAGLPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ L+ ++SGL Q
Sbjct: 244 VNDDAATLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRHLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
P Y+LD+PGG+GKV + +++ +G++ +TD VH YPP
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLEE-SDGAWQVTDPSGAVHPYPP 345
>gi|251773208|gb|EES53760.1| Lysine 2,3-aminomutase [Leptospirillum ferrodiazotrophum]
Length = 411
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 128/325 (39%), Positives = 200/325 (61%), Gaps = 6/325 (1%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
+++ Y I + +LI +P DPI Q IP E EDP+G++ SP+
Sbjct: 32 EKVEGLYPIRINDYYRSLI--SDPQDPIGLQVIPDPAEWMDADS-PEDPLGEDADSPVPA 88
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
IVHRYPDR+L + + CP+YCR+C R+ +VG +G V+S ++ + YI+E ++ +VI
Sbjct: 89 IVHRYPDRVLFLVTNQCPIYCRYCTRKRLVGKPEG-VVSREEIRQGIDYIREHPEVRDVI 147
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+GGDPL+L + L+++L LR I+H++I+R +RVP PQR+ PEL + L P+Y
Sbjct: 148 LSGGDPLMLKDEVLEEILTGLRSIEHLEIIRIGTRVPSALPQRVTPELCRMLSRF-HPLY 206
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ +H NHP E + E+ A LA+AGI L Q+VL+KGINDD E+L L + +++R+KP
Sbjct: 207 MNLHFNHPREITPESSEACRLLADAGIPLGCQTVLMKGINDDAEVLGTLFKGLLKIRVKP 266
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-HNI 327
YYL+ DL G +HFR +E+G I+ +L+ ISG+ P +++D PGG GK+ + +
Sbjct: 267 YYLYQADLTRGANHFRTPVEKGISIMKALQGNISGMAIPHFVIDAPGGGGKIPVLADDYL 326
Query: 328 KKVGNGSYCITDHHNIVHDYPPKSS 352
NG + ++ N ++ YP SS
Sbjct: 327 LGRENGQVLLKNYENKIYSYPDVSS 351
>gi|254562169|ref|YP_003069264.1| aminomutase [Methylobacterium extorquens DM4]
gi|254269447|emb|CAX25413.1| putative aminomutase, putative homologue kamA and yjeK
[Methylobacterium extorquens DM4]
Length = 353
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 174/345 (50%), Positives = 235/345 (68%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + + ++ ++ Y++++T +A LI+ +P DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAQALPALERVAARYAVSVTADMAELIDASDPADPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + G+VHRYPDR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDAHEAVSGVVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDVAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + + S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDA-ADESWRVTDPSGAVHAYPPES 347
>gi|288817647|ref|YP_003431994.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6]
gi|288787046|dbj|BAI68793.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6]
gi|308751245|gb|ADO44728.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobacter
thermophilus TK-6]
Length = 367
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 203/346 (58%), Gaps = 2/346 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ L + +D+ + E+++ I+ Y +A+TP +LI P +PNDPI Q I
Sbjct: 19 QIKNR-LKTREDIQKYIKLLPEEVEGIERTKGIYPLAITPHYFSLIEPEDPNDPIRLQCI 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P++EE++ + +P + G+ HRY DR+LL + C VYCR C R+ + +Q
Sbjct: 78 PRREEVDENAQRLGEPDPFREEGQVPGLTHRYRDRVLLSVTTFCAVYCRHCMRKRIF-AQ 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S+++ + YI+E +I +V+ +GG+PL LS+++L+ +L LR IKHV+I+RF
Sbjct: 137 GERSRSTEELRKMIEYIKEHEEIRDVLISGGEPLSLSYEKLEYLLSQLRKIKHVEIIRFG 196
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+ ++ PQR + + E P++I H NHP E +EEA A+ RL GI + +Q+
Sbjct: 197 TRLLVLAPQRFFDNKLLDILEKYSPIWINTHFNHPKEITEEAEEAVERLLRRGIPINNQT 256
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND+P+ + L R + +++KP YL H D G HFR +I++G +I+ L+ +I
Sbjct: 257 VLLKGVNDNPQTMLELFRGLLRIKVKPQYLFHCDPVKGAVHFRTSIDKGLEIMEYLRGRI 316
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG+ P Y +DLPGG GKV + + I + V +Y
Sbjct: 317 SGMGIPTYAVDLPGGKGKVPLMPNYIINREGDKFTFRSPFGDVVEY 362
>gi|300022957|ref|YP_003755568.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524778|gb|ADJ23247.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium
denitrificans ATCC 51888]
Length = 356
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 175/343 (51%), Positives = 235/343 (68%), Gaps = 1/343 (0%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ LTS DL A L D + + Y+I++TP +A+LI+P++P DPIARQF+P
Sbjct: 5 PRKLTSVDDLIAAELAPASARDALNNVGARYAISVTPAVADLIDPNDPADPIARQFVPDA 64
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL ER DPIGD SP G+VHRYPDR+LLK+ VCPVYCRFCFRREMVG G
Sbjct: 65 RELETHAAERADPIGDRIKSPAPGVVHRYPDRVLLKIASVCPVYCRFCFRREMVGPANGE 124
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS+ D AA+AYI+ +WEVI TGGDPL+LS +R+++V + L I HV+ILR+H+RV
Sbjct: 125 TLSADDLAAAVAYIRATPAVWEVILTGGDPLVLSPRRIREVTEMLSAIPHVKILRWHTRV 184
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+VDP R+ ELI LK K V++ +H NH E + A A+++L +AGI L+SQ+VLL
Sbjct: 185 PVVDPDRVTDELIAALKATHKTVFVGLHTNHARELTGSARTAVAKLVDAGIPLVSQTVLL 244
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KG+NDD + L +LMRT VELR+KPYYLHH DLA GT+HFR TI +GQ ++ L++++SGL
Sbjct: 245 KGVNDDADTLEDLMRTLVELRVKPYYLHHGDLAPGTAHFRTTIAKGQAVMRELRKRLSGL 304
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LDLPG +GKV ++ +G + D ++ H Y
Sbjct: 305 ALPTYVLDLPGAHGKVPLE-SYASLESSGRTRLRDAYDQEHIY 346
>gi|162455543|ref|YP_001617910.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
gi|161166125|emb|CAN97430.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
Length = 411
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 129/354 (36%), Positives = 195/354 (55%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNPNDPIARQF 60
QLRH L+SA +L+ A + E++ + I +TP +L + +P PI RQ
Sbjct: 59 QLRH-ALSSADELHGALSLTPEELAGARRAEKAGLPIRVTPYYLSLCDNADPACPIRRQC 117
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E +P + DP+G+ H +V RYPDR LL C VYCRFC R MVG
Sbjct: 118 VPLADESAEVPGDLVDPLGEVAHEVAPHLVQRYPDRALLLATDRCAVYCRFCTRSRMVG- 176
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G ++ + A+AY++ ++ +VI +GGDPL +S R+ +++ LR I+ V+ +R
Sbjct: 177 DGGGAVALERLAPAMAYLEAHPEVRDVIVSGGDPLAVSTDRVVRLIARLRQIQSVETIRL 236
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ PQRI EL++ LK P+++ H NHP E + A A RLA+ G +++Q
Sbjct: 237 ATRVPVTLPQRITAELVRALKPY-HPLWVMTHFNHPKELTPAAERACKRLADHGFPVMNQ 295
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GINDD LA L R V R++PYYL D GT+H R + G ++ L+ +
Sbjct: 296 TVLLRGINDDATTLATLFRGLVRWRVRPYYLLQMDPVRGTAHLRTPLATGVSLMEQLQGR 355
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY--PPKSS 352
++G+ P I+D PGG GKV I + G + H + +Y PP S
Sbjct: 356 LTGIALPKLIVDTPGGMGKVPIGPEYVVDRRPGRTVLRTHRGVEVEYVDPPAGS 409
>gi|169831230|ref|YP_001717212.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638074|gb|ACA59580.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 419
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 4/348 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R + +T+ + L + ++ I +I ++S Y A++P A ++ PI Q +
Sbjct: 74 QMRKR-ITTVEVLARFMELNRDDIHDIDKVSRQYRWAVSPYYAAVMAVGGVKGPIWAQAV 132
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ DP+ + SP+ GI RYPDR+++ + + C +YCR C RR +G +
Sbjct: 133 PSTAEITDA-RGTTDPMAERLTSPVPGITRRYPDRLIINVTNQCAMYCRHCQRRRNIG-E 190
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ EAAL YI+E +I +V+ TGGD L+LS L +L L I HV+I R
Sbjct: 191 VDRHQPRRVLEAALQYIRENPEIRDVLITGGDALLLSDTVLDWLLGELHSIPHVEIKRLG 250
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQRI L L+ P+YI NHP E + EA+ A RL AG++L +Q+
Sbjct: 251 TRALVTLPQRITAGLCAVLERYP-PIYINSQFNHPLEVTPEAVQACDRLVRAGVVLGNQA 309
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIN+DP ++ L + R++PYY+ H GTSHF +EEG I+ L+
Sbjct: 310 VLLKGINNDPHVMKKLNHELLRARVRPYYIFHAKPVRGTSHFITPVEEGLAIMEQLRGYT 369
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SGL P YI++ PGGYGK + + + + N V YP
Sbjct: 370 SGLAVPTYIINAPGGYGKTPVTPSYVVDHNDQRLVLRTWENRVLPYPN 417
>gi|295691014|ref|YP_003594707.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC
21756]
gi|295432917|gb|ADG12089.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC
21756]
Length = 346
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 178/346 (51%), Positives = 238/346 (68%), Gaps = 5/346 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
KTL + L A LI E++ ++ ++ Y++A+TP +A LI+ +PNDPIARQF+P E
Sbjct: 5 KTLRDVRSLAEAGLIPSERLAALEAVAARYAVAVTPAMAELIDTADPNDPIARQFVPAPE 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P E DPIGD+ HSP+ GI+HRYPDR+LLK H C VYCRFCFRREMVG + +
Sbjct: 65 ELVASPGEDGDPIGDSIHSPVDGIIHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ +AA AYI + QIWEVI TGGDP +LS +RL ++ L I+HV+++RFH+RVP
Sbjct: 125 LTPAQLDAAFAYIAARPQIWEVIVTGGDPFVLSSRRLAALIDRLEAIEHVKVVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
VDP + +L+ LK + K VY+A+HANH E + A AA + L +AGI ++SQ+VLLK
Sbjct: 185 AVDPALVTDDLVAALKRSTKAVYVALHANHARELTPAARAACAHLVDAGIAMVSQTVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDPE L+ LMR FVE RIKPYYLHH DLA GT+H R TIE+GQ I+ +L+ +SGL
Sbjct: 245 GVNDDPETLSALMRAFVETRIKPYYLHHGDLAPGTAHLRTTIEDGQAIMRALRGTLSGLA 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GK + + G + D + H YPP +
Sbjct: 305 QPTYVLDIPGGHGKAPVGPSYLSAGG-----VEDPNGRRHAYPPAA 345
>gi|150398662|ref|YP_001329129.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae
WSM419]
gi|150030177|gb|ABR62294.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae
WSM419]
Length = 350
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 195/346 (56%), Positives = 264/346 (76%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+T+ + +DL A LI +E+ + I ++ Y++A++P I+ L++ +P+DPIARQF+P
Sbjct: 5 RTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFVPDMA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL ++PEER DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG +
Sbjct: 65 ELAVMPEERADPIGDSTHSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ + + A+AYI +IWEVI TGGDPL+LS +RL ++++ L I+HV+++RFH+RVP
Sbjct: 125 LTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRRLGEIMERLAKIEHVKVVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V+P R++ LI LK +GK Y+A+HANHP E + A AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP+ILA LMR FVE R+KPYYLHHPDLA GTSHFRL+IEEGQ +VASL+ ++SGLC
Sbjct: 245 GVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRVSGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK + +I+ G G Y +TD H YPPK
Sbjct: 305 QPAYILDIPGGHGKSVVSASSIEAEGGGCYTVTDFRGNRHAYPPKG 350
>gi|307322539|ref|ZP_07601885.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
gi|306891821|gb|EFN22661.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
Length = 377
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 121/360 (33%), Positives = 189/360 (52%), Gaps = 17/360 (4%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++T+ ++L + E+ + ++S Y +TP +LIN + NDP+ Q +
Sbjct: 18 QLAN-SVTTIEELKLYVNVSPEEEEAFHQVSERYGFRVTPYYLSLINKEDRNDPVRLQAV 76
Query: 62 PQKEELNI------------LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
P EL + E+P+ + + IVHRYPDR+L L + C YC
Sbjct: 77 PDIRELQDLFHVEQLPSFHRSAVDSENPLWKEGRTDVGCIVHRYPDRVLFHLTNFCATYC 136
Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
R C R+ G Q + +AYI E+ +I +V+ +GGDPL L +L+ VL L
Sbjct: 137 RHCSRKVHAG-QGSIATDRTQIDEGIAYIAERPEIRDVLLSGGDPLTLPDSKLEYVLSRL 195
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
R + HVQI+R +R P+ PQRI E + +K+ P++I H NHP E + EA AI R
Sbjct: 196 RQLPHVQIIRIGTRTPVTMPQRITSEFCRMVKKY-HPIWINTHFNHPNEITPEAKTAIER 254
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ + +QSVLLKGIND E++ L+ + R++PYYL+H DL G HFR +I+
Sbjct: 255 LLEAGVPVGNQSVLLKGINDTVEVMKELVHQLLIARVRPYYLYHADLVRGAEHFRTSIDV 314
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
G I+ +L+ +G P Y++ P GK ++ + + G G + ++ P
Sbjct: 315 GMHIIENLRGHTTGFAVPQYVICTP--LGKTPLNPNYVIATGPGYIVLRNYEWRTWRDPD 372
>gi|310778246|ref|YP_003966579.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926]
gi|309747569|gb|ADO82231.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926]
Length = 418
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 122/346 (35%), Positives = 188/346 (54%), Gaps = 4/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL ++ ++ + L + +++ +EIK + Y A++P A LI+P N D I +
Sbjct: 65 QLINR-ISDIETLSLIVNLTEKEKEEIKNVGATYRWAISPYYAALIDPENKYDSIRLLSV 123
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E PE DP+G+ +P I RYPDR+++ + C +YCR C RR +G +
Sbjct: 124 PTGSE-AAHPEGEVDPMGEEFTNPAGSITRRYPDRLIINTTNECAMYCRHCQRRRNIG-E 181
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
T S ++ YI+ +I +V+ TGGD L LS KRL+ +LK L+ I HV +R
Sbjct: 182 TDTHKSDAVIMESIDYIRNNPEIRDVLLTGGDVLCLSDKRLEWILKELKSIPHVDYIRLG 241
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQRI EL+ LK+ +P+YI H NHP E + E A +LAN GI L +Q+
Sbjct: 242 TRTLVTMPQRITDELVDMLKKY-QPIYINTHFNHPKEITPEVKEACDKLANGGISLGNQA 300
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GIN+D ++ L +++R++PYY+ H GT HF ++++G +I+ L+
Sbjct: 301 VLLNGINNDKYVMRLLNHEMLKIRVRPYYIFHAKHVKGTLHFNTSVDDGIEIMEYLRGYT 360
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG+ P YI++ P G GK I + S I +V DY
Sbjct: 361 SGMAIPTYIINAPKGQGKTPIMPQYLLSRSKNSVKIRTWEGVVIDY 406
>gi|289548297|ref|YP_003473285.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM
14484]
gi|289181914|gb|ADC89158.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM
14484]
Length = 367
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 198/346 (57%), Gaps = 2/346 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + +L + E+ + I+ Y +A+TP +LI+PH+P DPI Q I
Sbjct: 19 QIQNR-IKTIHELTRYIKLLPEEEEGIRRTQGLYPMAITPYYLSLIDPHDPQDPIRLQAI 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ E + + + + + HRYPDR+L+++ C VYCR C R+ + SQ
Sbjct: 78 PRAIETDPYVQSYGEEDALREEGQIPHMTHRYPDRVLVRVTTFCAVYCRHCMRKRIF-SQ 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
++ ++ + + YI+ + +V+ +GGDPL LS+++L+ +L LR I HV+I+R
Sbjct: 137 GERSITKEEIDTIIQYIEAHPSVRDVLLSGGDPLSLSYEKLEYILSRLRRIPHVEIIRIG 196
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+P++ PQR E + L E P++I H NHP E + A A+ L GI + +Q+
Sbjct: 197 TRLPVLAPQRFFDEKLLKLLERYSPIWINTHFNHPKEITPYAAEAVENLLRHGIPVNNQT 256
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDDP+++ LMR+ + +++KP YL H D G HFR ++E+G +I+ L+ KI
Sbjct: 257 VLLKGVNDDPQVMLELMRSLLRIKVKPQYLFHCDPIKGAIHFRTSLEKGLEIMDFLRGKI 316
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG+ P Y +DLPGG GKV + + + Y + +Y
Sbjct: 317 SGMGIPTYAVDLPGGKGKVPLLPSYLVRKEGNRYTFRSFTGELVEY 362
>gi|15605944|ref|NP_213321.1| hypothetical protein aq_454 [Aquifex aeolicus VF5]
gi|4033489|sp|O66761|Y454_AQUAE RecName: Full=Uncharacterized KamA family protein aq_454
gi|2983117|gb|AAC06722.1| hypothetical protein aq_454 [Aquifex aeolicus VF5]
Length = 370
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 124/342 (36%), Positives = 201/342 (58%), Gaps = 4/342 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + +++ + E+ + IK Y A+TP +LINP +P DPI Q I
Sbjct: 19 QIQNR-IKTLKEIKKYLKLLPEEEEGIKRTQGLYPFAITPYYLSLINPEDPKDPIRLQAI 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ E++ + +P + G+ HRYPDR+LL + C VYCR C R+ + SQ
Sbjct: 78 PRVVEVDEKVQSAGEPDALKEEGDIPGLTHRYPDRVLLNVTTFCAVYCRHCMRKRIF-SQ 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ ++ + + YI+ +I +V+ +GG+PL LS ++L+ +L LR IKHV+I+RF
Sbjct: 137 GERARTKEEIDTMIDYIKRHEEIRDVLISGGEPLSLSLEKLEYLLSRLREIKHVEIIRFG 196
Query: 182 SRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R+P++ PQR N +L+ L++ P++I H NHP E +E A A+ RL GI + +Q
Sbjct: 197 TRLPVLAPQRFFNDKLLDILEKYS-PIWINTHFNHPNEITEYAEEAVDRLLRRGIPVNNQ 255
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+NDDPE++ L R + +++KP YL H D G HFR TI++G +I+ L+ +
Sbjct: 256 TVLLKGVNDDPEVMLKLFRKLLRIKVKPQYLFHCDPIKGAVHFRTTIDKGLEIMRYLRGR 315
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
+SG P Y +DLPGG GKV + + +KK +
Sbjct: 316 LSGFGIPTYAVDLPGGKGKVPLLPNYVKKRKGNKFWFESFTG 357
>gi|197118777|ref|YP_002139204.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem]
gi|197088137|gb|ACH39408.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem]
Length = 344
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 130/349 (37%), Positives = 201/349 (57%), Gaps = 12/349 (3%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ +TS ++L + Q + Y + +TP LI P DPI RQ +P
Sbjct: 8 LKN-CITSPEELSGLFRL---QGGAFSPVVERYPMRITPYYLGLI--EEPGDPIWRQCVP 61
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL+ L + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG
Sbjct: 62 DPAELDDL-TQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGC-- 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++ + A+AYI +I +V+ +GGDPL+L RL +L L I HV+I+R +
Sbjct: 119 -ASMAPAKVDDAIAYIAGDPRIRDVVLSGGDPLLLPDDRLAAILSALSRIPHVEIVRIGT 177
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R P+ P+RI P L + LK + PVY+ H NHP E + ++ A +RLA+AG+ L +Q+V
Sbjct: 178 RAPVTLPERITPGLTRLLKRS-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTV 236
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDDP+ + +LMR + +R++PYY+H DL GT+HFR + +G ++ +L+ S
Sbjct: 237 LLKGVNDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVGQGISVMQALRGHTS 296
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
GL P Y++DLPGG GKV + + G + T++ +YP
Sbjct: 297 GLAVPHYVIDLPGGKGKVDVLSGRPGS-GGRTLLFTNYLGEEIEYPEPD 344
>gi|182680126|ref|YP_001834272.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182636009|gb|ACB96783.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 356
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 189/349 (54%), Positives = 246/349 (70%), Gaps = 1/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
++R L S DL A LI EQ + E+ ++I LT ++A+LIN ++P DPIARQF+
Sbjct: 8 KMRP-ALRSTTDLVAAGLIPPEQERALAELEKTHAIGLTTIMADLINRNDPLDPIARQFL 66
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + PEE +DPIGD SP++GIVHRYPDR+LLKLLH+CPVYCRFCFRRE VG
Sbjct: 67 PDPREADRRPEELDDPIGDAAFSPVEGIVHRYPDRVLLKLLHICPVYCRFCFRRETVGPG 126
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
LS + +AA AYI IWEVI TGGDPLILS +RL ++L+ L I HV+ILR H
Sbjct: 127 SPMHLSPEALDAAFAYIASTPSIWEVILTGGDPLILSPRRLAELLERLDAIDHVKILRLH 186
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP VDP+RI P+L+ L+ + K VY+A+HANHP E + +A A + +AGI +LSQS
Sbjct: 187 TRVPCVDPERITPDLVALLRGSRKTVYLALHANHPRELTPQARQACAAFIDAGIPMLSQS 246
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+NDD +LA+LMR FVE RIKPYYLHHPDLA GT HFRL+I EGQ ++ L+ +
Sbjct: 247 VLLRGVNDDASVLADLMRAFVETRIKPYYLHHPDLAPGTGHFRLSIAEGQALMRRLRGHL 306
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGLCQP Y+LDLPGG+GK + + + + + D+ ++H YPPK
Sbjct: 307 SGLCQPTYMLDLPGGFGKSPVGPNYLGAENDQGLRVEDYRGMMHAYPPK 355
>gi|147676951|ref|YP_001211166.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI]
gi|146273048|dbj|BAF58797.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI]
Length = 423
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 186/346 (53%), Gaps = 5/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ H+ ++ + L + Q +IK + Y A++P A+L+ +DPI Q +
Sbjct: 76 QMSHR-ISDSGALAELFGFNEMQCAQIKRVGMRYRWAISPYYASLMEGDIEHDPIRLQSV 134
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EELN DP+ + SP + RYPDR+++ + + C +YCR C RR +G +
Sbjct: 135 PSIEELNET--GHPDPMAEELTSPAPCVTRRYPDRLIINVTNKCAMYCRHCQRRRNIG-E 191
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ AAL YI++ +I +V+ TGGD L+LS ++ +L L IKHV+I R
Sbjct: 192 VDRHSPHESLVAALEYIRKNREIRDVLITGGDALLLSDSKIDWLLSELDKIKHVEIKRLG 251
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQRI PEL LK+ P+Y+ NHP E + E+ A LA AG++L +Q+
Sbjct: 252 TRAIVTLPQRITPELCDVLKKHP-PIYVNTQFNHPREVTPESKQACDMLAEAGVVLGNQA 310
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+N+DP ++ L + +++ ++PYY+ H GT HF ++EG I+ L+
Sbjct: 311 VLLKGVNNDPHVMKKLNQELLKIMVRPYYIFHAKPVKGTLHFITAVDEGISIMEKLRGYT 370
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P YI++ P GYGK + + + N V +Y
Sbjct: 371 SGLAVPTYIINAPNGYGKTPVLPCYVLGNNGDKIKLRTWENRVLEY 416
>gi|294507125|ref|YP_003571183.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8]
gi|294343453|emb|CBH24231.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8]
Length = 401
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 116/349 (33%), Positives = 191/349 (54%), Gaps = 5/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + SA+ L ++ IK + + +TP A+L+ P +P+ P+ RQ +
Sbjct: 22 QMQNR-IHSAEALRKWIHPTDDERAAIKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQAV 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + DP+ + H P+K ++H Y DR+ + C +YCR+C R+ MVG
Sbjct: 81 PTMDEFGPDIVDELDPLDETGHEPVKNLIHNYEDRVAFCVTAECAIYCRYCLRKRMVG-D 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + +AA+ YI +I +V+ TGGDPL + L+ +L LR I HV+++RF
Sbjct: 140 AEYFMRTDEHQAAIDYIAAHDEIRDVLLTGGDPLTFNEANLEWLLSRLRAIDHVELIRFG 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+ P RI +L L + P++I H NHP E +++A AAI RL +AGI + +Q+
Sbjct: 200 SRMPVKLPYRITDDLCDLLAQY-HPLWINTHFNHPKECTDDAAAAIGRLKDAGIPVGNQT 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+NDDP+ + L V +R++PYYL+ + GT H R IE G + L+ +
Sbjct: 259 VLLRGVNDDPDTMKALNEGLVRMRVRPYYLYQAQIIGGTGHLRTPIEVGMHTMRQLRGRT 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y+LD P GKV ++ +K + + + P
Sbjct: 319 SGFAIPDYVLDTPH--GKVPLNRSYVKGRAGDHVLMESYDGTLWAEPNP 365
>gi|167644729|ref|YP_001682392.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31]
gi|167347159|gb|ABZ69894.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31]
Length = 347
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 179/346 (51%), Positives = 243/346 (70%), Gaps = 4/346 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L SAQ L A L+ E++ I+ ++ Y++A+TP +A LI+P N +DPIARQFIP +
Sbjct: 5 RPLRSAQALAEAGLVAAERLPAIEAVAARYAVAITPDMAALIDPANESDPIARQFIPSEA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL+ P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG +
Sbjct: 65 ELSENPGEIPDPIGDEAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLAN 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ + +AA AYI S+IWEVI TGGDPL+LS +RL+ + + L I+HV+++RFH+R+P
Sbjct: 125 LTPEKLDAAFAYIAAHSEIWEVIITGGDPLVLSPRRLRDIGERLAGIEHVKVVRFHTRIP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP I E++ LK +GK VY+A+HANH E +E A AA +R+ +AG+ +LSQ+VLLK
Sbjct: 185 VVDPGAITGEMVDALKASGKTVYVALHANHARELTEAARAACARIIDAGVPMLSQTVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GINDDPE L LMR FVE RI+PYYLHH D A GT H R ++E+G+ ++ +++ + SGLC
Sbjct: 245 GINDDPETLGTLMRAFVESRIRPYYLHHGDHAPGTGHLRTSVEDGRALMRAIRGRFSGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+P G+GKV I + G + D + H YPP
Sbjct: 305 QPTYVLDIPDGHGKVPIGPDYLAVEGE----VEDPNGGAHAYPPVG 346
>gi|114566648|ref|YP_753802.1| lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337583|gb|ABI68431.1| L-lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 422
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 190/352 (53%), Gaps = 5/352 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQF 60
Q+R++ + L + + + ++ IK +S A++P +LI+ N PI +Q
Sbjct: 75 QMRNR-INDGNVLASILGLNEFEVQTIKRVSKKVRWAISPYYLSLIDFENYAASPIYKQS 133
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E+ E +DP+G+ SP I RYPDR+++ + + C +YCR C RR G
Sbjct: 134 VPSLHEIIECKGE-DDPMGEEMSSPAPRITRRYPDRLIINVTNQCAMYCRHCQRRRNFG- 191
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + KD EAAL YI+ S+I +V+ TGGD L+LS + L +L L I HV+I R
Sbjct: 192 ETDNHAAHKDLEAALQYIKNNSEIRDVLITGGDALMLSDRTLDWLLGELDAISHVEIKRI 251
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI L LK P+YI N P E + EA A RL AG++L +Q
Sbjct: 252 GTRTPVTLPQRITANLCAVLKRH-TPIYINTQFNSPLEVTPEAKQACDRLIEAGVVLGNQ 310
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIND+ ++ L + +++R++PYYL GT+HF + G I+ L+
Sbjct: 311 AVLLKGINDNVHVMKKLNQELLKIRVRPYYLFQAKEVKGTTHFISPVNTGLDIMKHLRGY 370
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SGL P Y+++ PGGYGK ++ + + I+ +YP +++
Sbjct: 371 TSGLAIPTYVINAPGGYGKTPVNPEYVLDINENEVIISTWQGKTFNYPHRNN 422
>gi|150390499|ref|YP_001320548.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
gi|149950361|gb|ABR48889.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
Length = 422
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 117/348 (33%), Positives = 190/348 (54%), Gaps = 4/348 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL ++ ++ L + ++I++IK++ + +++P LI+ +N PI I
Sbjct: 68 QLSNR-ISDVDTLTKIIKLDDKEIEDIKKVGQEFRWSVSPYYTTLIDDNNKYCPIKLMAI 126
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ + DP+ + +P I RYPDR+++ + + C +YCR C RR +G+
Sbjct: 127 PHGYEIANTKGDT-DPMAEEFTNPAGSITRRYPDRLIINVTNECAMYCRHCQRRRNIGT- 184
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + + ++ YI++ +I +V+ TGGD L LS+ L +L L I V +R
Sbjct: 185 NDLHTSREVLQESIDYIRDNPEIRDVLITGGDALTLSNSMLDWLLGELHAIPSVDYIRLG 244
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR + PQRI +LI LK+ P++I H NHP E +EE+ AA RL+NAGI L +Q+
Sbjct: 245 SRTLVTMPQRITDKLINILKKYP-PIFINTHFNHPMEITEESKAACDRLSNAGIPLGNQA 303
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GIN++ ++ L ++ R++PYY+ H GTSHF ++++G +I+ L+
Sbjct: 304 VLLNGINNNKFVMRLLNHELLKCRVRPYYIFHAKHVIGTSHFNTSVDDGIEIMEYLRGYT 363
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SG+ P YI++ PGG GK I + G+ S I V DYP
Sbjct: 364 SGMAIPTYIINAPGGKGKTPILPQYLISRGSHSIKIRTWDGEVIDYPN 411
>gi|253700443|ref|YP_003021632.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21]
gi|251775293|gb|ACT17874.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21]
Length = 344
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 129/349 (36%), Positives = 198/349 (56%), Gaps = 12/349 (3%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ +TS ++L + Q + + Y + +TP LI DPI RQ +P
Sbjct: 8 LKN-CITSPEELSGLFRL---QGRDFSPVVERYPMRITPYYLGLIEEQ--GDPIWRQCVP 61
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL P + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG
Sbjct: 62 DPAELCD-PSQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGC-- 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++ + A+AYI +I +V+ +GGDPL+L L +L L I HV+I+R S
Sbjct: 119 -ASMAPARVDDAIAYIAGDQRIRDVVLSGGDPLLLPDDCLAGILSALSRIPHVEIVRIGS 177
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+ P+RI P L + LK PVY+ H NHP E + ++ A +RLA+AG+ L +Q+V
Sbjct: 178 RVPVTLPERITPGLARLLKRH-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTV 236
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDDP+ + +LMR + +R++PYY+H DL GT+HFR + +G ++ +L+ S
Sbjct: 237 LLKGVNDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVAQGISVMQALRGHTS 296
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
GL P Y++DLPGG GKV + + + T++ +YP
Sbjct: 297 GLAVPHYVIDLPGGKGKVDVLSGRPGS-DGRNLVFTNYKGEEIEYPEPD 344
>gi|325290800|ref|YP_004266981.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271]
gi|324966201|gb|ADY56980.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271]
Length = 416
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 191/346 (55%), Gaps = 4/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+H+ +T + L + Q EI ++ Y A++P +L + NP DP+ Q +
Sbjct: 72 QLKHR-ITDVETLDGIVGLSAVQKKEISKVGRVYRWAISPYYLSLADFSNPLDPVLMQGL 130
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL E EDP+ + SP I RYPDR+++ + ++C +YCR C RR +G +
Sbjct: 131 PTGMELEDDKGE-EDPMAEALTSPAPCITRRYPDRLIINVTNMCGMYCRHCQRRRNIG-E 188
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +D AALAY++E +I +V+ TGGD L+LS + L +L L I HV+I R
Sbjct: 189 IDSHKNRQDLSAALAYVRENPEIRDVLITGGDALLLSDETLDWLLNELHQIPHVEIKRLG 248
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P RI L+ L + P+Y+ NHP E + EA A+ RL +AG+IL +Q+
Sbjct: 249 TRVPVTLPARITDHLVNILAKYP-PLYLNTQFNHPIEVTLEAKQAVDRLISAGVILGNQA 307
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIN+ P I+ L + +++R++PYY+ H GT HF +I+EG ++ L+
Sbjct: 308 VLLKGINNHPNIMKKLNQELLKIRVRPYYIFHAKNIKGTKHFIPSIQEGLAVMEHLRGYT 367
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P YI++ P G GK+ + + + V Y
Sbjct: 368 SGLAVPTYIINAPKGGGKIPLLPQYLLSLNENKAVFRSWEGNVVHY 413
>gi|228994304|ref|ZP_04154195.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442]
gi|228765454|gb|EEM14117.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442]
Length = 367
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 192/351 (54%), Gaps = 7/351 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q R++ + ++L + E+ IK Y A+TP A+L++ +P+ PI +Q
Sbjct: 12 LQFRNR-IQKIEELKQYINVTPEEEQAIKRCEGIYRWAVTPYYASLMDKDDPSCPIRKQA 70
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP E I DP+GD + IVH+YPDRI++ + CPVYCR C R+
Sbjct: 71 IPSSGEFMINEYSDVDPVGDTKYRVTNRIVHKYPDRIIMLITDQCPVYCRHCTRKYHTTD 130
Query: 121 QKGTVLSSKD---TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
GT + E YI+ +I +V+ TGGDPL S +RL+ +LK LR I HV+I
Sbjct: 131 LDGTYFERSEAEGYEIDFEYIENHPEIRDVLLTGGDPLTYSDRRLESILKRLRSIPHVEI 190
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+RF SR P++ PQRI E + L++ P+++ H NHP E ++E+ A++ L G+ +
Sbjct: 191 IRFGSRYPVLLPQRITKEFCEMLEKY-HPIWLNTHFNHPKEVTKESAHAVNLLLKHGVPV 249
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLLKGINDD + + L++ +++R++PYYL+H D G SHF ++E+G +I+ L
Sbjct: 250 QNQSVLLKGINDDLDTMKQLVQALLKIRVRPYYLYHCDNVTGVSHFMTSLEKGVEIMRGL 309
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+G P YI+ GK+ I + + + + + + P
Sbjct: 310 VGHTTGFATPNYIITTIN--GKIPIPLETVLEHSDEGLILKSYEDKETVIP 358
>gi|222106966|ref|YP_002547757.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4]
gi|221738145|gb|ACM39041.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4]
Length = 349
Score = 381 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 193/342 (56%), Positives = 252/342 (73%), Gaps = 1/342 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
KT+ + ++L L+ E E+ ++ Y+IA+TP + LI+P++P DPIA QF+PQ
Sbjct: 6 KTVKTVRELVETGLVAAETGPELDAVAARYAIAITPAMLALIDPNDPTDPIAAQFVPQAG 65
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P ER DPIGD+ HSP++GIVHRYPDR+LLK++H CPVYCRFCFRREMVG +
Sbjct: 66 ELVHQPVERADPIGDHAHSPVEGIVHRYPDRVLLKVVHSCPVYCRFCFRREMVGPDGDGL 125
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS +AA+ YI++ IWEVIFTGGDPL+LS +RL+ +L+ L I HV+I+RFHSRVP
Sbjct: 126 LSGPALDAAITYIRDHKDIWEVIFTGGDPLVLSPRRLRSILQQLGTIDHVRIIRFHSRVP 185
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP RI+ +LI L+ +GK YIAIHANHP E + +A AA ++L AG LLSQ+VLLK
Sbjct: 186 VADPARIDKDLIDALQASGKTTYIAIHANHPRELTPQARAASAKLLQAGFALLSQTVLLK 245
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD +LA+LMR+FV++RI+PYYLHHPDLA GT HFRL+I EGQ IV++L +SGLC
Sbjct: 246 GVNDDAGVLADLMRSFVDMRIRPYYLHHPDLAPGTGHFRLSIAEGQAIVSALHGHLSGLC 305
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
QP Y+LD+PGG+GK ID I K G+ Y +TD H H Y
Sbjct: 306 QPTYVLDIPGGHGKAPIDASQISKEGD-HYLVTDFHGHHHIY 346
>gi|237755590|ref|ZP_04584206.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692253|gb|EEP61245.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 374
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 122/346 (35%), Positives = 194/346 (56%), Gaps = 6/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ +TS +L IK E+ + +IS + TP +LINP++ NDPI +Q +
Sbjct: 29 QIANR-ITSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQIL 85
Query: 62 PQKEELNILPEE--REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P +E++ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M
Sbjct: 86 PDIKEIDEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMFL 145
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + ++ +A YI+ I EV+ +GGDPL L +K+++ +LK L I H+ ++R
Sbjct: 146 EDERAR-TKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVIR 204
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
SR +V+P R E + L E V++ H NHP E + E A+ + + G +L+
Sbjct: 205 IGSRELVVNPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVLN 264
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKGIND E + NLMR ++++IKPYYL D G HFR +E G +I+ L+
Sbjct: 265 QTVLLKGINDSKETIENLMRDLLKVKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLRG 324
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
++SGL P + +DL GG GKV + + I + ++ N
Sbjct: 325 RLSGLGIPTFAVDLLGGLGKVPVLPNYIIEKNEDYIVFRNYENKTV 370
>gi|222055869|ref|YP_002538231.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32]
gi|221565158|gb|ACM21130.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32]
Length = 347
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 131/341 (38%), Positives = 197/341 (57%), Gaps = 10/341 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + E +I +++ Y + +T LI P D I RQ IP E
Sbjct: 11 CVTAPDELSPLFNLDTE---DIAQVAKRYPMRITRYYLGLIER--PGDAIWRQCIPDPLE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ EDP+ + SP+ G++HRYPDR++ + VC VYCRFC R+ VG + T
Sbjct: 66 FEDQAQ-MEDPLDEELLSPVPGLIHRYPDRVVWLVSSVCAVYCRFCMRKRRVGCTEATET 124
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
++ A LAYI +I +VI +GGDP +L L+++L LR I HV+I+R +R +
Sbjct: 125 GTRQ--AVLAYIANHPEIRDVILSGGDPFLLEDDVLEEILSGLRQIHHVEIIRIGTRTTV 182
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P+RI L + LK+ P+Y+ H NHP E + + A +RLA+AGI L +Q+VLLKG
Sbjct: 183 TLPERITTGLCRMLKKF-HPIYVNTHFNHPKEITAASARACARLADAGIPLGNQTVLLKG 241
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDDP+++ LM+ +++R+KPYYLH DL GT+HFR +I+ G +I+ L+ SGL
Sbjct: 242 INDDPQVMKRLMQLLLKIRVKPYYLHQMDLVRGTAHFRTSIDRGLQIMEGLRGHTSGLAS 301
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P+Y +DL GG GKV + + + + S I + V Y
Sbjct: 302 PYYAIDLEGGKGKVPLLPEYV-RRDDDSLLIRSYRGEVVRY 341
>gi|168699149|ref|ZP_02731426.1| lysine 2,3-aminomutase YodO family protein [Gemmata obscuriglobus
UQM 2246]
Length = 481
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 113/342 (33%), Positives = 192/342 (56%), Gaps = 1/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ S + L E+++ + E+ + Y +A+ P +LI+P +PNDPI Q +P E
Sbjct: 55 SIRSVRQLRTLLSFTPEELEALGELESEYKLAIPPYFFSLIDPEDPNDPIRLQSVPSPLE 114
Query: 67 LNILP-EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E +DP+ + SP+ G+ HRY DR LL C +YCR+C R+ ++ G
Sbjct: 115 AESASGHELDDPLEEEKDSPVPGLTHRYSDRALLVTTPNCTMYCRYCTRKRATLTRGGWE 174
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
S D E + Y++E +I +VI +GGDPL L +L+ L++L+ +KHV ++R +RVP
Sbjct: 175 GVSADDERMIQYVREHREIKDVIVSGGDPLTLPMGKLRYYLESLKAMKHVDVIRVGTRVP 234
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ PQR+ + L + + VY+ H NHP E + EA+ A L AG+ + + +VLLK
Sbjct: 235 VTLPQRLYDPELIDLLGSAEKVYVQTHFNHPREVTPEAVRACKSLLRAGVPINNHTVLLK 294
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD + +L R + +++PYYL H D G HFR ++ +G +I+ L+ +SG+
Sbjct: 295 GVNDDVGTMRSLFRALLRAKVRPYYLFHCDPVTGAGHFRTSVWKGLEIMEGLRGHMSGIG 354
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y++D P G GK+ I + + + + + ++ ++ Y
Sbjct: 355 IPTYVVDGPQGSGKIPILPNYLISMSDDVVVLRNYEGMIVRY 396
>gi|188996732|ref|YP_001930983.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188931799|gb|ACD66429.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 374
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 122/346 (35%), Positives = 192/346 (55%), Gaps = 6/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++T TS +L IK E+ + +IS + TP +LINP++ NDPI +Q +
Sbjct: 29 QIANRT-TSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQIL 85
Query: 62 PQKEELNILPEE--REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P +E++ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M
Sbjct: 86 PDIKEIDEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMFL 145
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + ++ +A YI+ I EV+ +GGDPL L +K+++ +LK L I H+ ++R
Sbjct: 146 EDERAR-TKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVIR 204
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
SR + +P R E + L E V++ H NHP E + E A+ + + G +L+
Sbjct: 205 IGSRELVANPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVLN 264
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKGIND E + NLMR ++ +IKPYYL D G HFR +E G +I+ L+
Sbjct: 265 QTVLLKGINDSKETIENLMRDLLKAKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLRG 324
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
++SGL P + +DL GG GKV + + I + ++ N
Sbjct: 325 RLSGLGIPTFAVDLLGGLGKVPVLPNYIIEKNEDYIVFRNYENKTV 370
>gi|302386645|ref|YP_003822467.1| lysine 2,3-aminomutase YodO family protein [Clostridium
saccharolyticum WM1]
gi|302197273|gb|ADL04844.1| lysine 2,3-aminomutase YodO family protein [Clostridium
saccharolyticum WM1]
Length = 419
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 116/346 (33%), Positives = 191/346 (55%), Gaps = 4/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL HK ++ L + + + IK++ Y A++P +L +PH+ DPI I
Sbjct: 65 QLTHK-ISDINTLSEIIPLNETEKMRIKKVEKKYRWAVSPYYLSLADPHDNYDPIRLLSI 123
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL P DP+G+ +P I RYPDR+++ + + C +YCR C RR +G +
Sbjct: 124 PTHKELED-PCLDLDPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG-E 181
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + ++ YI+E +I +V+ TGGD L LS + L+ ++K L+ I H+ +R
Sbjct: 182 EDVHRSREMILESIEYIRENEEIRDVLITGGDALCLSDEDLEWMIKQLKEISHIDYIRLG 241
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + PQRI +L L++ P+YI H NHP E ++ + AA +LA++GI+L +Q+
Sbjct: 242 TRSLVTMPQRITDQLCSMLRKY-HPIYINTHFNHPIEITKASKAACEKLADSGIVLGNQA 300
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GIN++ I+ L ++ R++PYY+ H GT+HF +IE+G +I+ L+
Sbjct: 301 VLLNGINNNKYIMRVLNHELLKCRVRPYYIFHAKHVQGTAHFNTSIEDGIEIMEYLRGYT 360
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG+ P +I++ P G GK I + I G G + + Y
Sbjct: 361 SGMAIPTFIVNAPKGQGKTPIFPNYIVSRGPGYVQLRTWEGNMVKY 406
>gi|284097493|ref|ZP_06385581.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3]
gi|283830995|gb|EFC35017.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3]
Length = 340
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 134/345 (38%), Positives = 201/345 (58%), Gaps = 10/345 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L T+ + + L A + E++ I + I + P +LI P DPI +Q +
Sbjct: 6 RLVRDTVNTPEKLAAAFDVDLEEMQRIH---KEFPIRINPYYLSLIKE--PGDPIWKQVV 60
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL + EDP+ + + S + + HRYPDR L + ++CP+YCRFC R+ VG
Sbjct: 61 PDPREL--MSTGVEDPLHEEDDSEVPNVTHRYPDRALFYVNYMCPIYCRFCTRKRKVGDP 118
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+S + E LAYIQ +I +VI +GGDPL+L+ K++ ++ LR IKH++I+R
Sbjct: 119 H--SISEDNIETGLAYIQAHPEIRDVIISGGDPLMLTDKKIDMIVGGLRAIKHLEIIRIG 176
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP+ PQRI PEL LK P YI H NHP E + E A LA+AGI L +Q+
Sbjct: 177 SRVPVTLPQRITPELCAILKRH-HPFYINTHFNHPREITPETEKACGMLADAGIPLGNQA 235
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDDP+++ LM+ + +R+KPYY++ DL GT HFR ++ G IVA+L+ I
Sbjct: 236 VLLKGVNDDPDVMVELMKGLLRIRVKPYYIYQADLVVGTDHFRTAVQTGLDIVAALRGHI 295
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SGL P Y++D PGG GK+ + + + + + ++ V+
Sbjct: 296 SGLGVPHYVVDAPGGGGKIALIPNPVVAFDDDEIQLRNYEGGVYS 340
>gi|258516088|ref|YP_003192310.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257779793|gb|ACV63687.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 408
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 193/350 (55%), Gaps = 5/350 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ ++ + L Q+++IK++ Y A++P +L N N PI +QFI
Sbjct: 64 QIKNR-FSNVEQLQKILNTCP-QLEDIKKVERVYRWAVSPYYLSLSAVDNVNCPIRKQFI 121
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL DP+ + N SP K +V RYPDR+++K+ + C +CR C R+ +G Q
Sbjct: 122 PSILELQD-ELGLSDPVDEKNTSPTKAVVRRYPDRLIIKVTNQCASFCRHCQRKRTIGKQ 180
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
SS + E A+ YI++ +I +V+ TGGD L+LS K+L +L L I HV+I R
Sbjct: 181 -DLHTSSGNIEKAVDYIKKNPEIRDVLITGGDALLLSDKKLDWLLTELDNINHVEIKRIG 239
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P RI +L L P+YI NHP E + EA A ++L AG++L +QS
Sbjct: 240 TRVPVTLPMRITEKLCGILGNHP-PLYINTQFNHPLEVTPEAATACNKLIQAGVVLSNQS 298
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK IND+P I+ L + +++R++PYYL H GT HF + G +I+ L+
Sbjct: 299 VLLKEINDNPHIIKKLNQELLKIRVRPYYLFHAMPVKGTRHFSTKLSVGLEIMEKLRGYT 358
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P YI+++ GG GKV I + + + N + + KS
Sbjct: 359 SGLAIPSYIVNVNGGLGKVPIQPQYLFFNEHNEITLRTWENKLVAFIEKS 408
>gi|115380257|ref|ZP_01467275.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|115362736|gb|EAU61953.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
Length = 378
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 116/333 (34%), Positives = 182/333 (54%), Gaps = 3/333 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q RH + S L + ++ ++E + + + ++P +LI+P +P P+ Q I
Sbjct: 48 QQRH-AVRSLAQLERYVPLTPQERAGVQETAALFRVGISPYYLSLIDPEHPFCPVRMQSI 106
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EE I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR +
Sbjct: 107 PVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRR-ITKG 165
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
LS +AYI+ ++ +V+ +GGDP ILS RL+++L L I HV+++R
Sbjct: 166 GEAELSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRIG 225
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P R+ L L+ PVY+ H NHP E + EA A RL + G+ + +Q+
Sbjct: 226 TRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQA 284
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VL++ +N D I+ L + +R++PYYLH D+A G H R I +G +I+ ++
Sbjct: 285 VLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGHT 344
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
+GL P +DLPGG GKV + + + G
Sbjct: 345 TGLAVPHLAVDLPGGGGKVTLQPDYVVERGEHE 377
>gi|297617606|ref|YP_003702765.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus
lipocalidus DSM 12680]
gi|297145443|gb|ADI02200.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus
lipocalidus DSM 12680]
Length = 417
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 115/345 (33%), Positives = 187/345 (54%), Gaps = 5/345 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+R++ + L I + I ++ Y A++P +L+ N+P+ Q +
Sbjct: 72 HMRNR-INDVSVLTKILDISTFESRGITKVGRTYRWAVSPYYLSLVGDDYLNNPVYLQAV 130
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL LP+ DP+ + SP I RYPDR+++ + + C ++CR C RR +G +
Sbjct: 131 PDPREL--LPKGELDPMDEAGTSPAPRITRRYPDRLIINVTNQCAMFCRHCQRRRNIG-E 187
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S +D AAL YI +I +V+ TGGD L+LS + L +L L I HV+I R
Sbjct: 188 IDQHASREDVRAALHYISGNPEIRDVLITGGDALLLSDRTLDWILTELDRIPHVEIKRIG 247
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+P+ PQR+ PEL + + + P+Y+ NHP E + EA A L AG +L +Q+
Sbjct: 248 TRIPVTLPQRVTPELCEVISKHP-PIYVNTQFNHPLEVTPEAKQACDMLVQAGAVLGNQA 306
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND P ++ L + +R++PYY+ HP GTSH ++IE+G +I+ +L+
Sbjct: 307 VLLRGINDCPVVMKKLNHELLRIRVRPYYIFHPKAVRGTSHRWVSIEKGLEIMEALRGHT 366
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SGL P YI++ PGG+GK+ + + K+ + + +
Sbjct: 367 SGLAVPTYIINAPGGFGKIPLMPQYLLKLEPDKAVVRTWEGRIVE 411
>gi|153004183|ref|YP_001378508.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
gi|152027756|gb|ABS25524.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
Length = 385
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 122/349 (34%), Positives = 190/349 (54%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R+ L +A++L + +E+ + + +A+TP A+L++P +P+ PI Q I
Sbjct: 21 QHRN-ALRTAEELGRVVWLGEEERRGLAQALGRTRVAVTPYYASLMDPRHPSCPIRLQAI 79
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E P + DPIG+ H P + IVH+Y DR+L + C VYCR C RR +
Sbjct: 80 PSAREAEEAPGDLRDPIGEEAHRPARAIVHKYRDRVLFLAVDRCSVYCRHCTRRRITFGA 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G E +AY++ ++ +VI +GGDPL+LS +RL +L LR I HVQ+LR
Sbjct: 140 DGG-FDRDAIEEGIAYVRAHREVRDVIVSGGDPLVLSDERLDALLGGLRAIPHVQLLRVA 198
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ P R+ P L L+ P+++ H NHP E + +A AA L + G+ + +QS
Sbjct: 199 TRAPVTCPMRVTPALAALLRRHA-PLFVVTHFNHPAECTPDARAACEALVDHGVPVENQS 257
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+N +L +L + R++PYYLH DLA GT+H R +E G I+ +++ +
Sbjct: 258 VLLRGVNSSARLLTDLNERLLTFRVRPYYLHQGDLAEGTAHLRTPLEAGVAILEAMRGRT 317
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P +DLP G GK+ + G++ + H + YP
Sbjct: 318 SGLAIPHLAVDLPDGGGKITLQPSYQLGREGGAHALRSHRGGRYLYPDP 366
>gi|317154407|ref|YP_004122455.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316944658|gb|ADU63709.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 416
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 118/349 (33%), Positives = 182/349 (52%), Gaps = 7/349 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ L + + +A+TP + + R
Sbjct: 62 QIDNRIL-DVDMVEKILGYS---RAGSMPLGKGLPMAVTPYYLGVAAVAGSA-SLRRCIE 116
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + E EDP+G+ H + GIVHRYPDR+L C YCR+C R +VG
Sbjct: 117 PTIHEFVMDQSEAEDPLGEEGHMVVPGIVHRYPDRVLFLATDYCSTYCRYCTRSRLVGRN 176
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ K ++A+AYI+ I +V+ +GGDPL L RL +L LR I HV+I+R
Sbjct: 177 GRKHDTKK-WKSAIAYIRNTPAIRDVLLSGGDPLTLPDDRLDWLLTELRAIPHVEIIRIG 235
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
++VP V PQRI PEL L++ P++I++H HP E + E + A + LA+AGI L SQ+
Sbjct: 236 TKVPAVLPQRITPELTAMLRKH-HPLFISLHFAHPDELTAETVRACTMLADAGIPLGSQT 294
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDD + LM+ ++ R++PYYL+ D G++HFR +E+G +I+ L+
Sbjct: 295 VLLKGVNDDTNTMKRLMQGLLKARVRPYYLYQCDPIPGSAHFRTRVEKGLEIIQGLRGHT 354
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ + + ++ ++ YP
Sbjct: 355 SGYAVPSYVIDAPGGGGKIPLLPEYYVGRDERGVILRNYEGNIYTYPDP 403
>gi|315122590|ref|YP_004063079.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495992|gb|ADR52591.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 351
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 284/344 (82%), Positives = 318/344 (92%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
LTSAQ LY A LI++EQI+ IKEISNHYSIALTP +ANLI+PHNPNDPIARQFIPQKEE+
Sbjct: 8 LTSAQQLYKAKLIEQEQINTIKEISNHYSIALTPFMANLIDPHNPNDPIARQFIPQKEEM 67
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
NILPEEREDPIGD+NHSPLKGIVHRYPDR+LLKLLH+CPVYCRFCFRREMVGSQKGT+LS
Sbjct: 68 NILPEEREDPIGDSNHSPLKGIVHRYPDRVLLKLLHICPVYCRFCFRREMVGSQKGTILS 127
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+D +AAL+YIQ +IWEVIFTGGDPLILS RL+ VLK L IKHV+ILRFHSRVPIV
Sbjct: 128 PQDIDAALSYIQNHPKIWEVIFTGGDPLILSLNRLKTVLKMLMEIKHVKILRFHSRVPIV 187
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
DPQRI+PE IQCLKE+GKP+YIAIHANHP EFS+E+++AIS+LA+AGIILLSQSVLLKGI
Sbjct: 188 DPQRISPEFIQCLKESGKPIYIAIHANHPREFSQESLSAISKLADAGIILLSQSVLLKGI 247
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDDP+ILA+LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQKIVASLKE ISG+CQP
Sbjct: 248 NDDPKILADLMRIFVESRIKPYYLHHPDLAPGTSHFRLTIEEGQKIVASLKENISGICQP 307
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
FYILD+PGGYGKVKID+HNIKK+ + SY ITDH+NIVH YPP+S
Sbjct: 308 FYILDIPGGYGKVKIDSHNIKKIDDESYLITDHNNIVHHYPPRS 351
>gi|225849905|ref|YP_002730139.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1]
gi|225646470|gb|ACO04656.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1]
Length = 378
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 124/346 (35%), Positives = 193/346 (55%), Gaps = 5/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + S Q+L I K++ + +++S + TP +L+ + DP+ RQ
Sbjct: 29 QLKNR-IKSIQELEKVFSIDKKKKEIFQKVSPVFHFGTTPYYISLVKKPDYTDPVFRQIF 87
Query: 62 PQKEELNI--LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P EE++ DP + SP++GI HRYPDR+L ++ C VYCR C R+
Sbjct: 88 PSFEEIDPDIQNNGSNDPFNEE-RSPVEGITHRYPDRVLFRVTTFCSVYCRHCMRKRNFI 146
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S KD + + YI++ I EV+ +GGDPL L +K+L +L L+ IKHV I+R
Sbjct: 147 -YGERAKSKKDIDIMIEYIRKNRSIREVLISGGDPLTLPNKKLDYILGRLQGIKHVDIIR 205
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
SR P+V+P R E + L E ++I H NHP E ++E A+ + + G +L+
Sbjct: 206 IGSREPVVNPFRFYDENLLELFERYDKLWIVTHFNHPNEITQETKKAVKNILSTGTPVLN 265
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKGINDD I+ LMR+ + ++IKPYYL D G HFR I++G +I+ L+
Sbjct: 266 QTVLLKGINDDKYIIEELMRSLLRVKIKPYYLFFCDPTKGVLHFRTDIKKGIEIMEYLRG 325
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
++SGL P Y +DLP G GKV + I ++ + S ++ +
Sbjct: 326 RLSGLGIPTYAVDLPEGKGKVPLLPEYIVEINDKSTVFRNYEGEIV 371
>gi|158424552|ref|YP_001525844.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571]
gi|158331441|dbj|BAF88926.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571]
Length = 375
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 167/341 (48%), Positives = 228/341 (66%), Gaps = 1/341 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +A DL A L + + + Y++A+TP + ++ + +DPIARQF+P E
Sbjct: 30 TLRTADDLIAAGLAPAAERAVLDAVGARYAVAVTPELVAAMDRTDASDPIARQFVPDVAE 89
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P+E DPIGD+ HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG T L
Sbjct: 90 LRTDPQELVDPIGDDAHSPVPGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETAL 149
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ E AL Y+ ++WEVI TGGDP ++S +R+ V+ L I HV+++RFH+RVPI
Sbjct: 150 TPDMLERALGYVAAHPEVWEVILTGGDPFMVSPRRMADVVGRLAAIPHVKVVRFHTRVPI 209
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P+R++ E+++ LK G Y+A+H NH E + A AA+ RLA+AGI LLSQ+VLLKG
Sbjct: 210 AAPERVSEEMVRALKAPGVAAYVAVHVNHARELGDAATAALGRLADAGIPLLSQTVLLKG 269
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L L R VE R+KPYYLHHPDLA GT HFRL++ EGQ +V +L+ ++SG+ Q
Sbjct: 270 VNDRVETLDALFRALVERRVKPYYLHHPDLAPGTGHFRLSVPEGQALVRALRGRLSGIAQ 329
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LD+PGG GKV + + G G + + D+ +H Y
Sbjct: 330 PTYVLDIPGGAGKVPLTPGYLTPQGAG-WHVADNCGGIHAY 369
>gi|83310383|ref|YP_420647.1| lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1]
gi|82945224|dbj|BAE50088.1| Lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1]
Length = 344
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 169/348 (48%), Positives = 233/348 (66%), Gaps = 6/348 (1%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+TL +AQDL++A LI ++ + ++ Y++ALTP + +LI+P +P DPIARQ++P
Sbjct: 3 SRRTLRTAQDLHDAGLIPS--VEAVAGVAEAYAVALTPAVVDLIDPADPADPIARQYVPS 60
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EEL PEE DPIGD +SP+KG+VHRYPDR+LL L VCPVYCRFCFRR VG
Sbjct: 61 AEELVTTPEELADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVG-DGD 119
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
++ + + ALAY+ + +I EVI TGGDPL+L RL +L + I HV+++R HSR
Sbjct: 120 ATMTEAEIDTALAYVAGRPEIREVILTGGDPLMLPPPRLAALLGRIGAIAHVELIRIHSR 179
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+ DP+R+ P+L + L KPV++A+H NHP+E S A + RLA G+ LLSQ+VL
Sbjct: 180 VPVSDPERVTPDLARVLGGGDKPVWLAVHVNHPHELSPLARGGLERLARTGVPLLSQTVL 239
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
LKG+ND +L L R V R++PYYLHHPDLA GTSHFR TIEEGQ ++ SL+ ++SG
Sbjct: 240 LKGVNDSVSVLDELFRALVRNRVRPYYLHHPDLAPGTSHFRPTIEEGQALMRSLRGRLSG 299
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+ QP Y+LD+PGG GKV + + + D +HDY ++
Sbjct: 300 IAQPTYVLDIPGGAGKVPVGPQY---WDGEAGTVADPGGRLHDYAERA 344
>gi|323701829|ref|ZP_08113499.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
nigrificans DSM 574]
gi|323533133|gb|EGB23002.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
nigrificans DSM 574]
Length = 422
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 121/347 (34%), Positives = 187/347 (53%), Gaps = 4/347 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ + Q L + E ++ I ++ HY A++P L+ PI +Q I
Sbjct: 75 QMANR-IKDVQVLGQLMNLSAEDMNLIDQVGQHYRWAVSPYYLALVIISGLTGPIGKQAI 133
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E+ EDP+G+ SP I RYPDR+++ + + C +YCR C RR +G +
Sbjct: 134 PSIKEIEDHS-GVEDPMGEEFTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRRNIG-E 191
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K +AAL YI+E +I +V+ TGGD L+L K++ +L L I HV+I R
Sbjct: 192 VDVHKPRKVLQAALDYIRENEEIRDVLITGGDALLLPDKQIDWLLTELDRIPHVEIKRIG 251
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ PQRI P L L++ P+YI NHP E + EA A RL AG++L +Q+
Sbjct: 252 TRTPVTMPQRITPTLCAILEKHP-PIYINTQFNHPLEVTPEAKTACDRLVKAGVVLGNQA 310
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK IN+ P+++ L ++ +++R++PYY+ H GT HF ++EEG I+ L+
Sbjct: 311 VLLKDINNHPDVMKRLNQSLLQIRVRPYYIFHAKNVKGTGHFITSVEEGIAIMDQLRGYT 370
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SGL P YI++ P GYGK I + + + V YP
Sbjct: 371 SGLAVPTYIINAPNGYGKTPILPQYVLDRKDNYITLRTWEKRVIRYP 417
>gi|197121712|ref|YP_002133663.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
gi|196171561|gb|ACG72534.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
Length = 402
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 122/352 (34%), Positives = 181/352 (51%), Gaps = 5/352 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q RH LT+A D + + + H +A TP A+L++ +P PI Q +
Sbjct: 21 QQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQVM 79
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S
Sbjct: 80 PSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFSD 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR
Sbjct: 140 DEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRVA 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ +P R+ L P+++ H NHP E + EA A RL + G+ + +QS
Sbjct: 200 TRAPVTNPMRVTDALAAA-LRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQS 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++
Sbjct: 259 VLLRGVNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGHT 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC---ITDHHNIVHDYPPK 350
SGL P +DLPGG GKV + + G + + + YP
Sbjct: 319 SGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370
>gi|85717361|ref|ZP_01048313.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A]
gi|85695836|gb|EAQ33742.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A]
Length = 365
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 181/355 (50%), Positives = 243/355 (68%), Gaps = 10/355 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ +DL L + ++++++ Y+IA+TP +A LI+P +P+DPIARQ++P E
Sbjct: 11 TVRHPEDLIAHGLAPAAALADLEKVAARYAIAITPEVAGLIDPTDPDDPIARQYLPSANE 70
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD+ HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L
Sbjct: 71 LAAQPGERADPIGDHAHSPVDGIVHRYPDRVLLKLIHVCAVYCRFCFRREMVGPAKETAL 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S T AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R H+RVP+
Sbjct: 131 SKSATTAALDYIRAHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
D R+ E++ L+ G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+G
Sbjct: 191 ADSARVTDEMVAGLRTEGAATWLALHANHPRELTAAARAACARIVDAGIPMVSQSVLLRG 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+EEGQ ++ +L+ ++SGLCQ
Sbjct: 251 VNDDAATLETLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEEGQLLMRALRGRVSGLCQ 310
Query: 307 PFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGKV + + + Y ITD+ VH YPP S
Sbjct: 311 PDYVLDIPGGYGKVPVGPDYMSLSDLTYRGGEHRPELRYHITDYCGGVHLYPPVS 365
>gi|148264204|ref|YP_001230910.1| lysine 2,3-aminomutase YodO family protein [Geobacter
uraniireducens Rf4]
gi|146397704|gb|ABQ26337.1| L-lysine 2,3-aminomutase [Geobacter uraniireducens Rf4]
Length = 347
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 137/341 (40%), Positives = 205/341 (60%), Gaps = 8/341 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++TS + L I E + + Y + +TP NLIN P DP+ RQ +P E
Sbjct: 11 SITSPEQLARRFGIDAE---PLLRVVQRYPMRITPYYLNLINE--PGDPLWRQCVPDARE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L ++EDP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG G V
Sbjct: 66 LED-DLQQEDPLREEILSPVPGLIHRYPDRVVWLVSSTCAVYCRFCMRKRQVGC-VGAVT 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
AAL YI + +I +VI +GGDPL+L L+++L LR I H++I+R SRVP+
Sbjct: 124 GKVQISAALDYIASRPEIRDVILSGGDPLLLDDDALEEILARLRQIPHLEIIRIGSRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P+RI L + LK P+YI H NHP E + E+ A +RLA+AGI L +Q+VLLKG
Sbjct: 184 TLPERITTRLCRMLKRY-HPLYINTHFNHPLEITAESATACARLADAGIPLGNQTVLLKG 242
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+P ++ LM+ +++R+KPYY+H DL GT HFR +E+G +I+ SL+ SG+
Sbjct: 243 VNDNPGVMKRLMQLLLKIRVKPYYIHQMDLVKGTGHFRTRVEQGLEIMESLRGHTSGMAS 302
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P+Y++DL GG GKV + +K+VG + ++ + +Y
Sbjct: 303 PYYVIDLEGGKGKVPLLPDYVKRVGGNVLLVRNYRGEMVEY 343
>gi|220916509|ref|YP_002491813.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954363|gb|ACL64747.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 402
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 122/352 (34%), Positives = 182/352 (51%), Gaps = 5/352 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q RH LT+A D + + + H +A TP A+L++ +P PI Q +
Sbjct: 21 QQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQVM 79
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S
Sbjct: 80 PSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFSD 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR
Sbjct: 140 DEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRVA 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ +P R+ L P+++ H NHP E + EA A RL + G+ + +QS
Sbjct: 200 TRAPVTNPMRVTDALAAA-LRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQS 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ +
Sbjct: 259 VLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGRT 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC---ITDHHNIVHDYPPK 350
SGL P +DLPGG GKV + + G + + + YP
Sbjct: 319 SGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370
>gi|134299994|ref|YP_001113490.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
reducens MI-1]
gi|134052694|gb|ABO50665.1| glutamate 2,3-aminomutase [Desulfotomaculum reducens MI-1]
Length = 422
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 115/346 (33%), Positives = 187/346 (54%), Gaps = 4/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ + + + + + + I+++ Y A++P L P+ Q I
Sbjct: 75 QMANR-IKDVKVISQLIDLSPAEKEAIEKVGRQYRWAVSPYYMALAMVSGSGGPVWLQAI 133
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE+ EDP+G+ SP++G+ RYPDR+++ + + C +YCR C RR +G +
Sbjct: 134 PCIEEVKDR-YGVEDPMGEEYTSPVEGVTRRYPDRLIINVTNQCAMYCRHCQRRRNIG-E 191
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S K E AL YI+E +I +V+ TGGD L+LS ++++ +L L I HV+I R
Sbjct: 192 IDVHKSRKVLEGALQYIRENKEIRDVLITGGDALLLSDRQIEWLLTELDNIPHVEIKRLG 251
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ PQRI PEL + L+ P+YI NHP E + EA A L AG++L +Q+
Sbjct: 252 TRTPVTMPQRITPELCKILENHP-PIYINTQFNHPLEVTPEAKKACDMLVKAGVVLGNQA 310
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK IN+ P+++ L ++ + +R++PYY+ H GT HF +++G I+ L+
Sbjct: 311 VLLKNINNQPDVMKRLNQSLLTIRVRPYYIFHAKAVKGTRHFITGVDDGIAIMEQLRGYT 370
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P YI++ P GYGK + I + N + + Y
Sbjct: 371 SGLAVPTYIINAPNGYGKTPVLPQYIIENKNDQVTLRTWEKRIIPY 416
>gi|75675833|ref|YP_318254.1| hypothetical protein Nwi_1641 [Nitrobacter winogradskyi Nb-255]
gi|74420703|gb|ABA04902.1| L-lysine 2,3-aminomutase [Nitrobacter winogradskyi Nb-255]
Length = 366
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 179/354 (50%), Positives = 241/354 (68%), Gaps = 10/354 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +DL L + ++++++ Y+IA+TP +ANLI+P +P+DPIARQ++P +E
Sbjct: 12 TLRRPEDLIAHGLAPAAALADLEKVAARYAIAITPEVANLIDPADPDDPIARQYLPSADE 71
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L ER DPIGD+ SP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L
Sbjct: 72 LAAQAYERADPIGDHARSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETAL 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S T AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R H+RVP+
Sbjct: 132 SKSATAAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP R+ E+ L+ G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+G
Sbjct: 192 ADPARVTDEMAAALRTDGATTWLALHANHPRELTAAARAACARIIDAGIPMVSQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FV+ RIKPYYLHH DLA GT+H R T+E+GQ ++ L+ ++SGLCQ
Sbjct: 252 VNDDAATLEALMRAFVQCRIKPYYLHHGDLAPGTAHLRTTLEQGQALMRELRGRVSGLCQ 311
Query: 307 PFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPK 350
P Y+LD+PGGYGK + + + Y ITD+ VH YPPK
Sbjct: 312 PDYVLDIPGGYGKSPVGPGYMSPSDLISGAGEHRPELHYLITDYCGGVHLYPPK 365
>gi|302875509|ref|YP_003844142.1| lysine 2,3-aminomutase YodO family protein [Clostridium
cellulovorans 743B]
gi|307687963|ref|ZP_07630409.1| lysine 2,3-aminomutase YodO family protein [Clostridium
cellulovorans 743B]
gi|302578366|gb|ADL52378.1| lysine 2,3-aminomutase YodO family protein [Clostridium
cellulovorans 743B]
Length = 424
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 120/349 (34%), Positives = 188/349 (53%), Gaps = 6/349 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ ++ + L + +E+ + IK++ Y ++P A+LI+ N N P+ Q +
Sbjct: 68 QISNR-ISDIKILSKIIKLSEEEAEHIKKVEQKYRWGISPYYASLIDESNSN-PVKLQCV 125
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ELN DP+G+ SP I RYPDR+++ + ++C +CR C RR +G
Sbjct: 126 PTLFELNDE--GTLDPMGEEYTSPAGTITRRYPDRLIINVTNMCASFCRHCQRRRNIG-I 182
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S D E ++ YI+ +I +V+ TGG+PL+LS + +L L IK ++ +R
Sbjct: 183 VDKHQSISDLEESIEYIRNNREIRDVLITGGEPLLLSDGMIDWLLGELFKIKTLEYVRIG 242
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RV PQRI L+ LK+ P+YI NHP E + EA A +LAN GI L +Q+
Sbjct: 243 TRVLATLPQRITANLLSILKKYS-PLYINTQFNHPLEITREAKEACDKLANIGIPLGNQT 301
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GIN+D ++ L + ++ RIKPYY+ H GT+HF +I++G +I+ L+
Sbjct: 302 VLLNGINNDKYVMRLLNQELLKCRIKPYYIFHGKKIMGTTHFNTSIDDGIEIMEYLRGYT 361
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG+ P YI++ P G GK I I G + I + DYP
Sbjct: 362 SGMAIPTYIINAPNGNGKTPILPQYIISRGKNNVKIRTWEGKIFDYPNY 410
>gi|256378515|ref|YP_003102175.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM
43827]
gi|255922818|gb|ACU38329.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM
43827]
Length = 381
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 191/346 (55%), Gaps = 8/346 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+RH+ +T+ L + ++ I + Y ++TP A+L++P +P PI +Q +
Sbjct: 26 HMRHR-VTTLDKLREWVRVSPQEEAAISGTAGKYRWSVTPYYASLMDPDDPLCPIRQQAV 84
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P + EL P+ DP+GD + +VH+YPDR++L + CPVYCR C R+
Sbjct: 85 PAQGELLEFPDAEVDPVGDMFYRKTNRVVHKYPDRVVLLVTETCPVYCRHCTRKFHTTDV 144
Query: 122 KGTVLSSKD---TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+GT + E L YI+E +I +V+ TGGDPL ++L++++ LR I V+I+
Sbjct: 145 EGTYFRDNEGGGYEEDLRYIREHPEIRDVLLTGGDPLSYRDEKLEEIISGLRAIPSVEII 204
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR P++ PQR+ E + L PV++ H NHP E + EA AA+ RL G+ +
Sbjct: 205 RIGSRFPVLLPQRVTDEFCEMLARH-HPVWLNTHFNHPREITPEAAAAVDRLLRHGVPVG 263
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKGINDD + LM + +R++PYYL+H D G SHF ++E+G +I+ L+
Sbjct: 264 NQTVLLKGINDDVPTMRKLMTELLRIRVRPYYLYHCDNVTGVSHFMTSVEKGLEIMEGLQ 323
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
++G P Y+L GK+ I + V +G + ++
Sbjct: 324 GHMTGFGVPQYVLTT--RIGKIPISRPYHEAVEDG-LALRNYRGQT 366
>gi|86158969|ref|YP_465754.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775480|gb|ABC82317.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 402
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 181/352 (51%), Gaps = 5/352 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q RH L +A D + + + H +A TP A+LI+ +P P+ Q +
Sbjct: 21 QQRH-ALATAADFERLFPLTPAERRGFALAAGHTRVAATPYYASLIDRDHPGCPVRLQVM 79
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S
Sbjct: 80 PSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFSD 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR
Sbjct: 140 DEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRVA 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ +P R+ L P+++ H NHP E + EA A RL + G+ + +QS
Sbjct: 200 TRAPVTNPMRVTEALAAA-LRRHAPLFVITHFNHPKECTPEAREACERLVDHGVPVENQS 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ +
Sbjct: 259 VLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGRT 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC---ITDHHNIVHDYPPK 350
SGL P +DLPGG GKV + + G + + + YP
Sbjct: 319 SGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370
>gi|144898375|emb|CAM75239.1| Protein of unknown function DUF160 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 353
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 159/345 (46%), Positives = 226/345 (65%), Gaps = 5/345 (1%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
++L DL A L+ + Q + ++ IA+TP +A+LI+ + DPIARQ++P
Sbjct: 12 SRSLRRVDDLIGAGLVDESQRAALDAVARSSVIAITPAVADLIDAGDAADPIARQYVPNA 71
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL++ EER DPIGD+ SP+KG+VHRYPDR LLK + VCPVYCRFCFRRE VG
Sbjct: 72 AELHVAAEERADPIGDDAFSPVKGVVHRYPDRALLKPILVCPVYCRFCFRREAVG-DADG 130
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS+ + + ALAY+ ++ + E+I TGGDPL+L+ RL ++ + + H+++LRFHSRV
Sbjct: 131 TLSAAELDEALAYLAGQTDLREIIVTGGDPLMLNAARLADLVARIAQLPHIEVLRFHSRV 190
Query: 185 PIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
P+ DP+R++ + LK V++++H NHP E S A A+ RLA+AG+ L+SQSVL
Sbjct: 191 PVADPERVSSAMASALKSTETLAVWVSVHVNHPRELSAIAGKALRRLADAGVPLVSQSVL 250
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
LKG+NDDP +L L R + R++PYYLHHPDL GTSHFR ++ EGQ I+ +L+ ++SG
Sbjct: 251 LKGVNDDPAVLEELFRALIRNRVRPYYLHHPDLTRGTSHFRPSLAEGQAIMRALRGRLSG 310
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+ QP Y+LD+PGG GKV + +TD H YP
Sbjct: 311 IAQPTYVLDIPGGAGKVPVGPDW---WDGERLQVTDWRGRRHPYP 352
>gi|322419288|ref|YP_004198511.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18]
gi|320125675|gb|ADW13235.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18]
Length = 343
Score = 375 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 135/342 (39%), Positives = 207/342 (60%), Gaps = 11/342 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +TS ++L Q ++ + Y + +TP LI P DPI RQ +P E
Sbjct: 10 RCITSPEELSGLFR---SQGADLTCVVRRYPMRITPYYLGLIRE--PGDPIWRQCVPDPE 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
ELN + + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG Q
Sbjct: 65 ELNDV-TQSPDPLDEERLSPVPGLIHRYPDRVVFLVSTACAVYCRFCMRKRGVGCQG--- 120
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+S + ++AYI K QI +VI +GGDPL+LS RL +L LR I HV+I+R +RVP
Sbjct: 121 MSPAPVDQSVAYIASKPQIRDVILSGGDPLLLSDDRLDGILTALRRIPHVEIIRIGTRVP 180
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ P+RI +L + LK +P+Y+ H NHP E +E++ A +RLA+AGI L +QSVLLK
Sbjct: 181 VTLPERITVKLARLLKRH-QPLYLNTHFNHPREITEQSARACARLADAGIQLGNQSVLLK 239
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP+++ LM+ + +R++PYY+H DL GT+HFR + +G ++A+L+ SGL
Sbjct: 240 GVNDDPQVMRELMQRLLAIRVRPYYIHQMDLVQGTAHFRTRVADGVAVMAALRGHTSGLA 299
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y++DLPGG GKV++ + ++++ +Y
Sbjct: 300 VPHYVIDLPGGKGKVEVTSARFSG-DGSRLTVSNYLGEEIEY 340
>gi|23014062|ref|ZP_00053900.1| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum
MS-1]
Length = 343
Score = 374 bits (961), Expect = e-102, Method: Composition-based stats.
Identities = 170/346 (49%), Positives = 231/346 (66%), Gaps = 6/346 (1%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+R TL +AQDL +A LI+ +++++ Y++ LTP + +LI+P +P DPIARQ++P
Sbjct: 4 VRRHTLRTAQDLLDAGLIRDA--AAVEQVARTYAVGLTPAVVDLIDPADPADPIARQYVP 61
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EEL EER DPIGD +SP+KG+VHRYPDR+LL L VCPVYCRFCFRR VG
Sbjct: 62 SPEELTTTAEERADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVG-DG 120
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++ + EAALAY+ + I EVI TGGDPL+L RL +L + I HV+++R HS
Sbjct: 121 EATMTEAEIEAALAYVACRPDIREVILTGGDPLMLPAPRLGALLDRIGAIGHVELIRIHS 180
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+ DP RI P+L L KPV++A+H NHP E S A A +S LA AG+ LLSQ+V
Sbjct: 181 RVPVSDPGRITPDLATVLGGGDKPVWLAVHVNHPREVSPLASAGLSMLARAGVPLLSQTV 240
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+ND ++L +L R + R++PYYLHHPDLA GTSHFR +I+EGQ ++ L+ ++S
Sbjct: 241 LLKGVNDRADVLDDLFRALIRNRVRPYYLHHPDLAPGTSHFRPSIKEGQALMRVLRGRLS 300
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
G+ QP Y+LD+PGG GKV + + D ++ H YP
Sbjct: 301 GIAQPTYVLDIPGGAGKVPVGPGY---WDGEEGVVIDPNDAEHSYP 343
>gi|78223047|ref|YP_384794.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15]
gi|78194302|gb|ABB32069.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15]
Length = 344
Score = 374 bits (961), Expect = e-102, Method: Composition-based stats.
Identities = 118/341 (34%), Positives = 193/341 (56%), Gaps = 10/341 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++T+ ++L I E + + Y + +T LI P D I RQ +P E
Sbjct: 11 SITTPEELAELLDIDPEPLAPL---VRRYPLRITRRYLGLI--GKPGDAIWRQCVPDPCE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ + DP+ + SP+ G++HRYPDR++ + + C VYCRFC R+ VG
Sbjct: 66 LDDD--QLSDPLDEERLSPVPGVIHRYPDRVVWLVSNECAVYCRFCMRKRRVGCPLAGSN 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ A+ YI I +VI +GGDPL+L +RL+ +L LR I HV+++R +R P+
Sbjct: 124 GRSG-DDAVRYIAATPAIRDVILSGGDPLLLDDERLEAILARLRAIPHVEMIRIGTRTPV 182
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P+RI L + LK P+Y+ H NHP E + EA A +RLA+ GI L +Q+VLL G
Sbjct: 183 TLPERITARLCRMLKRY-HPLYVNTHFNHPREITPEATKACARLADTGIPLGNQTVLLAG 241
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+P I+ LM+ + +R++PYY+H DL GT HFR + G I+ +L+ SG+
Sbjct: 242 VNDEPAIMTLLMQRLLAIRVRPYYIHQMDLVRGTGHFRTKVTTGLDIIGALRGHTSGMAT 301
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P++++D GG GK+ + +++ G+ ++ + ++ + +Y
Sbjct: 302 PYFVIDAAGGKGKIPLLPDAVERRGD-TWLLRNYRGEIVEY 341
>gi|16124969|ref|NP_419533.1| L-lysine 2,3-aminomutase [Caulobacter crescentus CB15]
gi|13421941|gb|AAK22701.1| L-lysine 2,3-aminomutase, putative [Caulobacter crescentus CB15]
Length = 345
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 5/346 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL A+ L A L+ E++ ++ ++ Y++A+TP +A LI+P +DPIARQF+P E
Sbjct: 5 QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + +
Sbjct: 65 ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ +AA AYI ++ QIWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+RVP
Sbjct: 125 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
VDP + PEL+ LK + K VY+A+HANH E + A AA +++ +AG+ ++SQ+VLL+
Sbjct: 185 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+PE L LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+ +SGL
Sbjct: 245 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GKV + + + + D V YPP +
Sbjct: 305 QPTYVLDIPGGHGKVPVGPNYLSDGA-----VEDPDGAVRPYPPTA 345
>gi|94270918|ref|ZP_01291853.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93450620|gb|EAT01735.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 365
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 130/349 (37%), Positives = 182/349 (52%), Gaps = 8/349 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L +LTS +L + E ++ + Y + + P +LI P DP+ RQ I
Sbjct: 17 RLLAASLTSPDELAARFDLDPE---PLRAVCRRYPLRINPYYLSLIKQ--PGDPLWRQAI 71
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL ED + + SP+ +VH+YPDR LL C +YCRFC R+ VG
Sbjct: 72 PDPRELTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGG 130
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +AAL Y+ I +V+ +GGDPL+L+ L +L LR I H++I+R
Sbjct: 131 RIVGGRHR-LQAALDYLAATPAIHDVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMG 189
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP PQR+ L LK P+Y+ H NHP E + EA A RLA AGI L +Q+
Sbjct: 190 SRVPCTLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQT 248
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDD + LMR + +R+KPYYL DL+ GT HFR +E+G I+ L
Sbjct: 249 VLLKGVNDDAATIKGLMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHT 308
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P LD PGG GK+ + + + G + +YP
Sbjct: 309 SGLATPTLALDAPGGMGKIPLTPDYHQVLKAGKLTFHSYTGQPGEYPNP 357
>gi|221233690|ref|YP_002516126.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000]
gi|220962862|gb|ACL94218.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000]
Length = 358
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 5/346 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL A+ L A L+ E++ ++ ++ Y++A+TP +A LI+P +DPIARQF+P E
Sbjct: 18 QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 77
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + +
Sbjct: 78 ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 137
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ +AA AYI ++ QIWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+RVP
Sbjct: 138 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 197
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
VDP + PEL+ LK + K VY+A+HANH E + A AA +++ +AG+ ++SQ+VLL+
Sbjct: 198 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 257
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+PE L LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+ +SGL
Sbjct: 258 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 317
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GKV + + + + D V YPP +
Sbjct: 318 QPTYVLDIPGGHGKVPVGPNYLSDGA-----VEDPDGAVRPYPPTA 358
>gi|94263390|ref|ZP_01287204.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93456226|gb|EAT06360.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 365
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 129/349 (36%), Positives = 181/349 (51%), Gaps = 8/349 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L +LTS +L + E ++ + Y + + P +LI P DP+ RQ I
Sbjct: 17 RLLAASLTSPDELAARFDLDPE---PLRAVCRRYPLRINPYYLSLIKQ--PGDPLWRQAI 71
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL ED + + SP+ +VH+YPDR LL C +YCRFC R+ VG
Sbjct: 72 PDPRELTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGG 130
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +AAL Y+ I +V+ +GGDPL+L+ L +L LR I H++I+R
Sbjct: 131 RIVGGRHR-LQAALDYLAATPAIHDVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMG 189
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP PQR+ L LK P+Y+ H NHP E + EA A RLA GI L +Q+
Sbjct: 190 SRVPCTLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAGGIPLGNQT 248
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDD + LMR + +R+KPYYL DL+ GT HFR +E+G I+ L
Sbjct: 249 VLLKGVNDDAATIKELMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHT 308
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P LD PGG GK+ + + + G + +YP
Sbjct: 309 SGLATPTLALDAPGGMGKIPLTPDYHQVLKAGKLTFHSYTGQPGEYPNP 357
>gi|115524934|ref|YP_781845.1| hypothetical protein RPE_2928 [Rhodopseudomonas palustris BisA53]
gi|115518881|gb|ABJ06865.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisA53]
Length = 361
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 178/356 (50%), Positives = 248/356 (69%), Gaps = 6/356 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
+Q++ +TL S +L L EQ+ + E+++ Y++A+T +A+LI+P +PNDPIAR
Sbjct: 5 VQIKPSDRTLRSPAELVARGLAPAEQLAALDEVASRYAVAVTAAVADLIDPADPNDPIAR 64
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q+IP +EL I ER DPIGD HSP+ GIVHR+ DR+L KL+ VC VYCRFCFRREMV
Sbjct: 65 QYIPSAQELVISAAERADPIGDAAHSPVAGIVHRHADRVLFKLVSVCAVYCRFCFRREMV 124
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G K + LS + AA+ YI+ +IWEVI TGGDPL+LS +RL++V+ L I+HV+I+
Sbjct: 125 GPGKDSALSPQAYRAAIDYIRAHGEIWEVILTGGDPLMLSPRRLEEVMADLAAIEHVKIV 184
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
RFH+RVP+ +P RI+ +L+ LK G ++A+HANHP E + A AA +R+ +AGI ++
Sbjct: 185 RFHTRVPVAEPSRISRDLVAALKADGVTTWVALHANHPRELTAAARAACARMVDAGIAMV 244
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
SQSVLL+G+NDD + LA LMR FVE RIKPYYLHH DLA GT+H R T+ EG++++ L+
Sbjct: 245 SQSVLLRGVNDDADTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGRELMRQLR 304
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNI----KKVGNGSYCITDHHNIVHDYPPK 350
++SGLCQP Y+LD+PGG+GK + + V Y + D+ H YPP
Sbjct: 305 GRVSGLCQPDYVLDIPGGFGKAPVGPEYLSPVASSVETQHYRVMDYCGDTHLYPPA 360
>gi|301058169|ref|ZP_07199221.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2]
gi|300447801|gb|EFK11514.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2]
Length = 354
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 132/330 (40%), Positives = 197/330 (59%), Gaps = 6/330 (1%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ +++K + + Y + + P LI NDPI RQ +P EL+ DP+
Sbjct: 27 LPSSHPEKLKRVISRYPMRINPYYLGLIRE--KNDPIYRQSMPDIRELDD-KGAAPDPLN 83
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ HSP++G+ HRYPDR+LL + C VYCRFC R+ VG +++ + E + YI+
Sbjct: 84 EEGHSPVRGLTHRYPDRVLLLVSSECAVYCRFCNRKRKVGRPG--MVTDRSIEEGIDYIR 141
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
++ +V+ +GGDPL+L RL ++L L I HV+I+R +RVP PQRI PEL
Sbjct: 142 AHREVRDVLLSGGDPLLLEDARLGEILSALHAISHVEIIRIGTRVPCTLPQRITPELAGL 201
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
L++ P+Y+ +H NHP E + EA A +RLA+AGI L Q+VLLKG+NDDP ++ LMR
Sbjct: 202 LQKF-HPLYMNVHFNHPLEITAEATLACNRLADAGIPLGCQTVLLKGVNDDPSVMQELMR 260
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ +R+KPYYL H D A GTSHFR ++ G I+ L+ SGLC P + +DL GG GK
Sbjct: 261 KLLIIRVKPYYLFHGDPARGTSHFRTSVSRGLNIIRELQGHTSGLCVPHFAIDLLGGGGK 320
Query: 320 VKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
V + ++ +GS +T++ + +P
Sbjct: 321 VPLLPDYLQGREDGSLLVTNYRGNAYRHPD 350
>gi|94266932|ref|ZP_01290585.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93452384|gb|EAT03003.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 365
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 129/349 (36%), Positives = 183/349 (52%), Gaps = 8/349 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L +LTS +L + E ++ + + Y + + P +LI P DP+ RQ I
Sbjct: 17 RLLAASLTSPDELAACFDLDPE---PLRAVCHRYPLRINPYYLSLI--EQPGDPLWRQAI 71
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL ED + + SP+ +VH+YPDR LL C +YCRFC R+ VG
Sbjct: 72 PDPRELTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGG 130
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +AAL Y+ I +V+ +GGDPL+L+ L +L LR I ++I+R
Sbjct: 131 RIVGGRHR-LQAALDYLAATPAIHDVLLSGGDPLLLTDDELLWLLAELRKIPQLEIIRMG 189
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP PQR+ L LK P+Y+ H NHP E + EA A RLA AGI L +Q+
Sbjct: 190 SRVPCTLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQT 248
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDD + LMR + +R+KPYYL DL+ GT HFR +E+G I+ L
Sbjct: 249 VLLKGVNDDAATIKELMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHT 308
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P LD PGG GK+ + + + G + + +YP
Sbjct: 309 SGLATPTLALDAPGGMGKIPLTPDYHQVLKAGKLTFSSYTGQPGEYPNP 357
>gi|195952479|ref|YP_002120769.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195932091|gb|ACG56791.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 365
Score = 371 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 121/342 (35%), Positives = 193/342 (56%), Gaps = 5/342 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLI-NPHNPNDPIARQF 60
QL+++ +T+ ++L + E+I ++ Y A+TP +L+ NP + DPI Q
Sbjct: 16 QLQNR-ITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLVKNPKDKKDPIRLQI 74
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E++ ++ P N + +KG+ HRY DR L+ + C VYCR C R+ +
Sbjct: 75 VPSPLEIDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCGVYCRHCMRKRIF-K 133
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + YI+ I +V+ +GGDPL L ++RL+ +L L I+H++++R
Sbjct: 134 EGTHAAPKELLDVYFDYIKNHKTIKDVLISGGDPLTLDNERLKYILNNLSSIEHLEVIRI 193
Query: 181 HSRVPIVDPQR-INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
SRVP+ PQR + EL+ L K ++I H NHP E +E+A AI L AG+ + +
Sbjct: 194 GSRVPVTLPQRLYDEELLDILSRYDK-LWINTHFNHPNEITEDAKVAIRNLLKAGVPVNN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKG+NDD E + LMR + +++KP YL H D GT HFR +IE+G +I+ ++
Sbjct: 253 QAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSIEKGLEIMDYMRG 312
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
++SG P Y +DLPGG GKV + KK+ +G Y
Sbjct: 313 RLSGFGIPTYAIDLPGGKGKVPLIPSYFKKLEDGLYEFIAFD 354
>gi|39996853|ref|NP_952804.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA]
gi|39983741|gb|AAR35131.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA]
gi|298505867|gb|ADI84590.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens KN400]
Length = 353
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 125/346 (36%), Positives = 191/346 (55%), Gaps = 10/346 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L +T+A ++ I Q + + Y + +TP L+ P DPI RQ I
Sbjct: 6 RLLADAVTTADEITERFGIDAGQ---LAPVIRRYPMRITPGYLRLV--EAPGDPIWRQCI 60
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL ++ DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG
Sbjct: 61 PDPAELCDD--QQSDPLHEERLSPVPGLIHRYPDRVVWVVSGECAVYCRFCMRKRQVGCM 118
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L YI E I +VI +GGDPL+L +RL+++L L I HV+++R
Sbjct: 119 TSRHC-EDPFGEPLRYIAETPAIRDVILSGGDPLLLDDERLEEILARLAAIPHVEMVRIG 177
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+ P+RI L + LK P+Y+ H NHP E + EA A +RLA+AGI L +QS
Sbjct: 178 TRTPVTLPERITARLCRMLKRY-HPLYVNTHFNHPREITAEAAKACARLADAGIPLGNQS 236
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL +NDDP ++ LM+ + +R++PYY+H DL GT HFR + G +I+ +L+
Sbjct: 237 VLLADVNDDPAVMTRLMQLLLSIRVRPYYIHQMDLVRGTGHFRTPVATGLEILTALRGNT 296
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG+ P Y++D PGG GK+ + I + G+ + + + +Y
Sbjct: 297 SGMATPHYVIDAPGGKGKIPLLPDCISRRGD-LWLLRTYTGETIEY 341
>gi|189913041|ref|YP_001964930.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|189913370|ref|YP_001964599.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|167777717|gb|ABZ96017.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167781438|gb|ABZ99735.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 354
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 121/346 (34%), Positives = 191/346 (55%), Gaps = 4/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ +T DL + E+ D + + + A+TP I+ +P+ PI +Q +
Sbjct: 9 QLQNR-ITQLADLETKITLTTEERDSFAKAYDQFQFAVTPYYLGRIDNKDPHCPIRKQIL 67
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ EL E +DP+ + H P+KG+ HRYPDR + + HVC VYCRFC R+ V +
Sbjct: 68 PRAGELVRKQNETDDPLAEEIHMPVKGVTHRYPDRAIWYISHVCAVYCRFCTRKRKVSTP 127
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ T + + E AL Y + ++++ EVI +GGDPL LS L +L L+ I H+ +R H
Sbjct: 128 EET-PNRSEWEKALDYFRGETKLKEVILSGGDPLTLSDSSLDYLLGELKKIPHLNQIRIH 186
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQ 240
+R P+ P R+ L + P+Y+ H NHP E S+E + R+ G + + +Q
Sbjct: 187 TRHPVTMPMRLTESLNSVFSKY-FPLYMVTHFNHPNEISDETKFYVMRMIKEGHVSIFNQ 245
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL GINDD IL++L + + IKPYYLH D G+S F + +E+G +I L+
Sbjct: 246 SVLLSGINDDANILSDLNYKLISIGIKPYYLHQCDEVFGSSDFVVPLEKGIEIYRKLRGF 305
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P Y+ DL GG GKV + ++K + Y ++ ++
Sbjct: 306 HSGITIPSYVKDLTGGGGKVLLSPDYLQKKTDKGYLFQNYLGDEYE 351
>gi|92117823|ref|YP_577552.1| hypothetical protein Nham_2300 [Nitrobacter hamburgensis X14]
gi|91800717|gb|ABE63092.1| L-lysine 2,3-aminomutase [Nitrobacter hamburgensis X14]
Length = 366
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 180/354 (50%), Positives = 242/354 (68%), Gaps = 10/354 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +DL L + ++ ++ Y+IA+TP +A+LI+P +P+DPIARQ++P +E
Sbjct: 12 TLRQPEDLIAHGLAPAAALPDLARVAARYAIAVTPEVASLIDPDDPDDPIARQYLPSVDE 71
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L
Sbjct: 72 LAAQPGERADPIGDRAHSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETAL 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R HSRVP+
Sbjct: 132 SKSAATAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAGIGHVKIVRIHSRVPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP R++ E++ LK AG ++A+HANHP E + A +A +R+ +AGI ++SQSVLL+G
Sbjct: 192 ADPTRVSDEMVAALKAAGATTWLALHANHPRELTAAARSACARIVDAGIPMVSQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+E+G+ ++ +L+ ++SGLCQ
Sbjct: 252 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEQGRALMRALRGRVSGLCQ 311
Query: 307 PFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPK 350
P Y+LD+PGGYGK + + + Y I D+ VH YPPK
Sbjct: 312 PDYVLDIPGGYGKSPVGPDYLSQSDLTFGEGEHRPESRYRIVDYCGGVHLYPPK 365
>gi|225181359|ref|ZP_03734803.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
gi|225167940|gb|EEG76747.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
Length = 416
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 114/320 (35%), Positives = 180/320 (56%), Gaps = 3/320 (0%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
++++ A TP +L+NP +PN P+ RQ IP EEL P ++DP+G+ SP
Sbjct: 96 VRKVGEKNRWATTPYYLSLMNPDDPNCPVRRQAIPATEELLN-PVGKDDPMGEQYTSPAP 154
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
I RYPDR+++ + + C +YCR C RR +G + + + +D +AAL Y++ +I +V
Sbjct: 155 AITRRYPDRLIINVTNQCGMYCRHCQRRRNIG-EVDRMTAREDLQAALDYVRNHPEIRDV 213
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ TGGD L+L+ + + +L L I HV+I R SR + P R+ EL L++ PV
Sbjct: 214 LLTGGDALMLNEEIIDWLLTELDNIPHVEIKRLGSRTLVTMPMRVTDELCAVLEKHS-PV 272
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
YI H N+P E + A +L AG+ L +Q+VLL G+NDDP ++ L +++ I+
Sbjct: 273 YINTHFNNPAEVTPAVAEATRKLTRAGVSLGNQAVLLAGVNDDPHVMKKLNHMLLQVMIR 332
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
PYY+ H GT+HFR +E G +I+ L+ + SG+ P +I++ P GYGK + +
Sbjct: 333 PYYIFHAKAVTGTAHFRTRVEVGIEIMEHLRGQTSGMAIPTFIVNAPEGYGKTPMLPEYL 392
Query: 328 KKVGNGSYCITDHHNIVHDY 347
G I N V +Y
Sbjct: 393 ISSGRDKIFIRTWENRVFEY 412
>gi|316934333|ref|YP_004109315.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris DX-1]
gi|315602047|gb|ADU44582.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris DX-1]
Length = 363
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 179/349 (51%), Positives = 245/349 (70%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL ++L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP+ EE
Sbjct: 14 TLRHPEELIAEGFAAADGRATLTEVAARYAIAVTPAVAALIDRDDPDDPIARQYIPRAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L
Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P+L+Q L+ K ++A+HANHP EF+ A A +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPTRITPDLVQALRTPSKTTWLALHANHPREFTAAARVACARIIDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDDP+ L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ
Sbjct: 254 VNDDPDTLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGN----GSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK + + + Y + D+ VH YPP+S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLLDADGTDPNSRYRVADYCGEVHLYPPRS 362
>gi|77920113|ref|YP_357928.1| hypothetical protein Pcar_2520 [Pelobacter carbinolicus DSM 2380]
gi|77546196|gb|ABA89758.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 347
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 136/343 (39%), Positives = 201/343 (58%), Gaps = 9/343 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++T+ L + E+ + Y + +TP +LI P D I RQ +P + E
Sbjct: 11 SVTAPAGLAERFGTD---MSELDAVVQRYPMRITPYYLDLIEK--PGDAIWRQCVPDRRE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L +E DP+ + SP+ +VHRYPDR+LL C VYCRFC R+ VG V
Sbjct: 66 LLPC-QEDADPLAEERLSPVPLLVHRYPDRVLLLASGQCAVYCRFCTRKRKVGCAAMGV- 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + + A+ Y+ Q+ +VI +GGDPL+L RL+ +L LR I HV+I+R SRVP+
Sbjct: 124 SDRHLDEAIDYVARTEQVRDVILSGGDPLLLEDDRLEHLLMRLRAIPHVEIIRIGSRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
PQRI EL L+ P+Y+ H NHP E + +A A RLA+AG+ L +Q+VLL+G
Sbjct: 184 TLPQRITEELCAMLRRY-HPLYLNTHFNHPRELTPQAFEACRRLADAGLPLGNQTVLLRG 242
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND P ++ L++ +++R++PYYLHH DLAAGT HFR IE G IVA+L+ ISGL
Sbjct: 243 VNDTPAVMRQLVKGLLKMRVRPYYLHHMDLAAGTGHFRTRIETGLDIVAALRGPISGLAV 302
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
P Y++D PGG GK+ + + K+G+ + + + ++P
Sbjct: 303 PHYVIDSPGGKGKIPLLPEYLVKLGDTAL-LRTPSGEMIEFPN 344
>gi|90424304|ref|YP_532674.1| hypothetical protein RPC_2807 [Rhodopseudomonas palustris BisB18]
gi|90106318|gb|ABD88355.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18]
Length = 368
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 177/349 (50%), Positives = 236/349 (67%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L+ +Q+ + ++ Y++A+T +A LI+P +P+DPIARQ+IP E
Sbjct: 20 TLRQPAELAARGLVAADQLPTLDAVAQRYAVAVTEAVAALIDPTDPDDPIARQYIPSAAE 79
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD H+PL GIVHR+ DR+L KL++VC VYCRFCFRRE VG K L
Sbjct: 80 LVRDPVERADPIGDAAHAPLDGIVHRHTDRVLFKLVNVCAVYCRFCFRRETVGPGKAATL 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AAL YI+ +IWEVI TGGDPL+LS +RL + + L I HV+I+R HSRVP+
Sbjct: 140 SGEAYRAALDYIRAHPEIWEVILTGGDPLMLSPRRLGEAMSDLAAIDHVKIIRIHSRVPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+P RI+ EL+ L+ +G V++A+HANHP E S A AA +R+ +AGI ++SQSVLL+G
Sbjct: 200 AEPSRISRELVGALQVSGATVWMALHANHPRELSAAARAACARIIDAGIPMVSQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD LA LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ L+ ++SGLCQ
Sbjct: 260 VNDDGPTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRQLRGRVSGLCQ 319
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNG----SYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK + + + Y +TD+ H YPP S
Sbjct: 320 PDYVLDIPGGYGKAPVGPNYLTPADEPAADLRYRVTDYCGDAHLYPPTS 368
>gi|146340545|ref|YP_001205593.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278]
gi|146193351|emb|CAL77367.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278]
Length = 364
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 180/358 (50%), Positives = 239/358 (66%), Gaps = 10/358 (2%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R TL SA DL L + ++ ++ Y++A+T +A+LI+ +P+DPIARQF+P
Sbjct: 6 RPTTLRSAADLVAQGLADPGEQATLERVAQRYAVAVTTHLADLIDSDDPDDPIARQFVPS 65
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K
Sbjct: 66 ADELVGAPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
LS AL YI+ +IWEVI TGGDPL+LS +RL +++ L I+HV+I+R H+R
Sbjct: 126 NALSEDAYCGALDYIRAHGEIWEVILTGGDPLMLSPRRLAEIMADLAAIEHVRIIRIHTR 185
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+P+ DP RI P L++ LK G +++A+HANHP E S + AA +RL +AGI L+SQSVL
Sbjct: 186 LPVADPARITPGLVEALKVKGAAIWVALHANHPRELSPDVRAACARLVDAGIPLVSQSVL 245
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ ++SG
Sbjct: 246 LRGVNDDAATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLAEGQALIRALRGRVSG 305
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGN----------GSYCITDHHNIVHDYPPKS 351
LCQP Y+LD+PGGYGK + I + Y + D+ H YPP
Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYITAEESVAQDHAAAAQTRYRVVDYCGEAHLYPPAG 363
>gi|51246056|ref|YP_065940.1| hypothetical protein DP2204 [Desulfotalea psychrophila LSv54]
gi|50877093|emb|CAG36933.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 353
Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 187/348 (53%), Gaps = 13/348 (3%)
Query: 7 TLTSAQDL----YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++TS L + + ++ + + + +LI DPI +Q IP
Sbjct: 11 SITSPSQLHLFKKKHQNLNETIS---NKVIPDFPMRINSYFLSLI--EEVGDPIWKQCIP 65
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E EDP+G+ SP+ +VH+YPDR LL + + C VYCRFC R+ MVG++
Sbjct: 66 DPRE-EEDFICMEDPLGEEALSPVPNLVHKYPDRALLLVTNQCAVYCRFCTRKRMVGTE- 123
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++ ++ +A Y++ I EV+ +GGDPL+L+ ++ +L L+ I + ++R S
Sbjct: 124 RMHITEENLQACYDYLRRTPAIREVLISGGDPLLLADDKIDHILSELQSIPSIDVIRIGS 183
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP P RI PEL+ L++ P+YI H NHP E + EA A + LA+ GI L Q+V
Sbjct: 184 RVPCTLPMRITPELVAILRKY-HPLYINTHFNHPRELTPEAKKACALLADGGIPLGCQTV 242
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+ND+ + L L +++R+KPYYL DL GT+HFR T + G I+ L IS
Sbjct: 243 LLKGVNDNAQTLKELFLGLLKMRVKPYYLFQADLTRGTNHFRTTTKTGIDIMRQLYGHIS 302
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
G+ P LD PGG GK+ + + IK+ G ++ + YP
Sbjct: 303 GMAIPRLALDAPGGKGKIPLSPNYIKESGEN-LIFENYLGEICSYPEA 349
>gi|118580185|ref|YP_901435.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus
DSM 2379]
gi|118502895|gb|ABK99377.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379]
Length = 346
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 120/322 (37%), Positives = 186/322 (57%), Gaps = 6/322 (1%)
Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
E ++ Y ++P A LI D I +Q IP EL+ + DP+ ++ SP
Sbjct: 22 AEFTSVAASYPFRVSPSYAKLIRRE--GDAIWKQCIPDLRELDDA-GQCPDPLAEHLLSP 78
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ G++HRYPDR++L + + CPVYCRFC R+ VG + + ++ + A+ YI I
Sbjct: 79 VPGLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVG-EGDAPMDAQTLKQAMDYIAANPAIR 137
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++I +GGDPL+L L +L+ LR I HV I+R +RVP+ P+R+ PEL LK
Sbjct: 138 DIILSGGDPLMLDDDSLHHILQQLRAIPHVTIIRIGTRVPVTLPERVTPELCTLLKRF-H 196
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P+YI H NHP E + + A LA+AGI L +Q+VLL+G+ND + + +L + LR
Sbjct: 197 PLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVNDSLDTMRSLQTGLLSLR 256
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++PYY+H DL GT+HFR I G +I+ L+ +SG+ P Y++DLP G GKV I
Sbjct: 257 VRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQYVIDLPDGKGKVPILPD 316
Query: 326 NIKKVGNGSYCITDHHNIVHDY 347
++++ G+ + + + Y
Sbjct: 317 DVERQGD-LLILRTYQGEMVRY 337
>gi|298292101|ref|YP_003694040.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM
506]
gi|296928612|gb|ADH89421.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM
506]
Length = 385
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 178/343 (51%), Positives = 241/343 (70%), Gaps = 3/343 (0%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+TL +L A+L+ + + ++ Y++A+TP +A LI+P +P DPIARQF+P
Sbjct: 15 PRTLRRLDELVEASLVAPD--PRLDAVAARYAVAVTPTLAGLIDPADPADPIARQFVPDA 72
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E+ LPEE EDPIGD HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG T
Sbjct: 73 REIETLPEELEDPIGDEAHSPVAGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAET 132
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS + EAALAY+ ++WEV+ TGGDPL+ + +RL +++ L I HV+I+RFH+RV
Sbjct: 133 SLSEEALEAALAYVAAHPEVWEVVVTGGDPLVAAPRRLADLMRRLAAIDHVKIVRFHTRV 192
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
PI P+R+ P L+ L+ AG Y A+HANH E EA AA++RLA+AGI L+ QSVLL
Sbjct: 193 PIASPERVTPALVDSLRAAGLTTYAAVHANHARELGPEARAALARLADAGIALVGQSVLL 252
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
G+NDD + L+ L R VE R+KPYYLHHPDLA GT+HFRLTIE GQ+++ +L+ ++SGL
Sbjct: 253 AGVNDDADTLSALFRALVENRVKPYYLHHPDLAPGTAHFRLTIERGQELMRALRGRVSGL 312
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LD+PGG+GKV + ++ G + +TD+ VH Y
Sbjct: 313 AIPTYVLDIPGGFGKVPVGPGYLEPTPEG-WRVTDYCGGVHAY 354
>gi|29899154|gb|AAP03121.1| arginine aminomutase [Streptomyces griseochromogenes]
Length = 410
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 113/346 (32%), Positives = 183/346 (52%), Gaps = 8/346 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+R + +T+ + I E + Y ++TP A+L++P +P P+ +Q +
Sbjct: 32 HMRKR-ITNLDKAREWIRPTPLEEKAIAETAGKYRWSVTPYYASLMDPDDPGCPVRQQAV 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL DP+GD + +VH+YPDR+++ + CPVYCR C R+
Sbjct: 91 PALGELMEFSGAEVDPVGDMYYRRTNRVVHKYPDRVIMLITEACPVYCRHCTRKFHTTDV 150
Query: 122 KGTVLSS---KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
GT +D L YI + +I +V+ TGGDPL +L++++ LR I V+I+
Sbjct: 151 DGTYFERNEGEDFSEDLRYIADHPEIRDVLLTGGDPLSYRDGKLEEIIAGLRAIPSVEII 210
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR P++ PQR+ PEL + L PV++ H NHP E + E+ AI RL GI +
Sbjct: 211 RIGSRFPVLLPQRVTPELCEMLARY-HPVWLNTHFNHPKEITPESERAIDRLLRHGIPVG 269
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL+GINDD + LM + +R++PYYL+H D G SHF ++E+G +I+ L+
Sbjct: 270 NQTVLLRGINDDLGTMRRLMTELLRIRVRPYYLYHCDNVTGVSHFMTSVEKGWEIMEGLQ 329
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
I+G P Y+L GK+ + ++ +G + ++
Sbjct: 330 GHITGFGVPQYVLTT--RLGKIPMVRPYYRETPDG-LVLRNYRGEE 372
>gi|197106130|ref|YP_002131507.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1]
gi|196479550|gb|ACG79078.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1]
Length = 341
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 170/346 (49%), Positives = 234/346 (67%), Gaps = 8/346 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + +DL A L ++ + ++ Y++A+TP +A L + +ARQF+P
Sbjct: 3 RPLRTPEDLIAAGLAPAAALEGLARVAERYAVAITPDMAGLSET---CEGVARQFVPTAA 59
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL PEER DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG +
Sbjct: 60 ELVQTPEERADPIGDEAHSPVEGIVHRYPDRVLLKANHACAVYCRFCFRREMVGPEGVRP 119
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS +AA+AY+ + +IWEVI TGGDPLILS +RL + L I HV+++RFH+RVP
Sbjct: 120 LSPAALDAAMAYVAARPEIWEVIVTGGDPLILSPRRLADIGARLAGIPHVKVVRFHTRVP 179
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
VDP ++ +++ LK +GK V++A+HANHP E + A+AA +R+ +AGI ++SQ+VLLK
Sbjct: 180 AVDPGKVTAGVVEALKASGKTVWVALHANHPDELTPAALAACARIVDAGIPMVSQTVLLK 239
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GINDDP++L LMR FVE RIKPYYLHH DLA GT HFR T+ EGQ ++ +L+ ++SGL
Sbjct: 240 GINDDPDVLDALMRRFVETRIKPYYLHHGDLAPGTGHFRATLAEGQDLMRALRGRLSGLA 299
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GK + + + D H YPP++
Sbjct: 300 QPTYVLDIPGGHGKAPVGPAYVHGGE-----VEDPQGRRHAYPPEA 340
>gi|158522524|ref|YP_001530394.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
gi|158511350|gb|ABW68317.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
Length = 358
Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats.
Identities = 131/345 (37%), Positives = 196/345 (56%), Gaps = 9/345 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + +DL + + Y +++ P +LI P DP+ RQ +P
Sbjct: 23 RAIADPKDLPDRLKAPP----GAAAVCRAYPMSVNPYYLSLIQ--APGDPLWRQVVPDAR 76
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL+ + +DP+ + SP+ G++HRYPDR+++ + CPV CRFCFR+ + G
Sbjct: 77 ELSGTLTD-DDPLTETAQSPVPGLIHRYPDRVVVLVSGRCPVVCRFCFRKRLAGR-AAAS 134
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ +AA AY++ + EVIF+GGDPL+L +L L+ I HV+ LR H+R P
Sbjct: 135 LTDDQVDAAAAYVRAAPAVREVIFSGGDPLMLEDDKLCAALEKFAAIGHVETLRIHTRTP 194
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ PQRI +L+ LK+ P+Y+ +H NHP E + A AA +RLA+AGI L SQ+VLL
Sbjct: 195 VALPQRITGDLVVLLKKF-LPLYVNVHVNHPREITAPAEAACARLADAGIPLGSQTVLLA 253
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GINDD + LMR + +R++PYYLHHPD+ GT HFR I G ++ SL ++ G+
Sbjct: 254 GINDDAITMEALMRALLRIRVRPYYLHHPDVVKGTGHFRPPINRGLSVMRSLVGRVPGMA 313
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
P Y++DLPGG GKV + + G + ++ V YP K
Sbjct: 314 VPRYVIDLPGGGGKVPLLPDYVVSSETGHLVVKNYQGKVFVYPEK 358
>gi|294675951|ref|YP_003576566.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003]
gi|294474771|gb|ADE84159.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003]
Length = 350
Score = 361 bits (927), Expect = 8e-98, Method: Composition-based stats.
Identities = 159/347 (45%), Positives = 211/347 (60%), Gaps = 5/347 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
LT +DL L+ Q+ ++ +++ + I +TP + I P DP+A QF+P E
Sbjct: 8 ALTRPEDLLAEGLVTPGQMPDLTQVAQDFRIRVTPAMRAAI--TAPADPVAAQFVPSAAE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L PEER DPIGD HSP G+ HRYPDR +L + C VYCRFCFRRE VG + L
Sbjct: 66 LITRPEERADPIGDAVHSPAPGLTHRYPDRAILHITKTCDVYCRFCFRRETVG--ETGPL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
D AL YI + E+I TGGDPL LS +RL+ VL L I H+ LRFHSRVP+
Sbjct: 124 PEPDLAQALEYIAATPALREIILTGGDPLTLSPRRLEDVLTRLSAIPHITTLRFHSRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RI P L+ L+ V++ +H NH E + A AA++RL +AG+ LLSQSVLLKG
Sbjct: 184 VAPERITPALVALLRAQRPAVWVVVHTNHAQELTAPARAALARLVDAGVPLLSQSVLLKG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L +L R + R+KPYYLHH DLA GT HFR TI G+ ++A L+ +SG
Sbjct: 244 VNDSHDALRDLFRALQDCRVKPYYLHHCDLAPGTGHFRTTIAAGRALMAGLRGPLSGAAI 303
Query: 307 PFYILDLPGGYGKVKIDTHNIK-KVGNGSYCITDHHNIVHDYPPKSS 352
P Y+LD+PGG+GKV I ++ G + +TD VHDY +S
Sbjct: 304 PTYVLDIPGGFGKVPITADHVAPGARPGLWRVTDWRGGVHDYADPAS 350
>gi|296448496|ref|ZP_06890376.1| lysine 2,3-aminomutase YodO family protein [Methylosinus
trichosporium OB3b]
gi|296253995|gb|EFH01142.1| lysine 2,3-aminomutase YodO family protein [Methylosinus
trichosporium OB3b]
Length = 376
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 172/346 (49%), Positives = 229/346 (66%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL S DL A L+ E ++ + YS+A+T A L++ +P DPIARQF+P E
Sbjct: 22 TLKSVADLVAAGLVAPEAAPALRAVEARYSVAVTAETAALLDRADPRDPIARQFLPDARE 81
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ LPEE DPIGD+ SP++G+VHRY DR+LLKLL VCP+YCRFCFRRE VG KG L
Sbjct: 82 LDTLPEELADPIGDDAFSPVEGLVHRYSDRVLLKLLSVCPIYCRFCFRRESVGLGKGGSL 141
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S AL YI E+ +I+EVI TGGDPL LS +RL + + LR I HV +LR H+R P
Sbjct: 142 SETALTRALDYIAERPRIFEVILTGGDPLALSARRLGLLAERLREIAHVAVLRIHTRAPT 201
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P + PE + L +GK VY+A+H NH E + A AI+R+ AG+ L+Q+VLL+G
Sbjct: 202 VSPDLVTPERLAALTASGKAVYMALHVNHARELTPRAREAIARIQAAGVATLAQTVLLRG 261
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD + L LMR LR+KPYYLHHPDLA GT+HFRL+IEEG+ + L +ISG+
Sbjct: 262 VNDDADTLETLMRALTALRVKPYYLHHPDLAPGTAHFRLSIEEGRALHGELARRISGIAL 321
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P Y+LD+PGGYGKV + + +I++ G + + D H YP + +
Sbjct: 322 PAYVLDIPGGYGKVPLQSPHIERNPAGDWLVRDRAGRAHAYPGEGA 367
>gi|308273444|emb|CBX30046.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.]
Length = 359
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 130/346 (37%), Positives = 200/346 (57%), Gaps = 11/346 (3%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L ++T ++L + K + I I +Y + + P +LI + N PI +Q +P
Sbjct: 22 LLQNSITKPEELIRILPVDKSK---IDRIIEYYPMRINPYYFSLIK--HKNCPIGKQAVP 76
Query: 63 QKEELNILPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
+E+ + DP+ + SP+ ++HRYP R+L + C +YCRFC R+ VG
Sbjct: 77 DMQEIEDINILSDPDPLCEEIQSPVPNLIHRYPGRVLFMVSAECAMYCRFCMRKRKVGY- 135
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
++ K L YI+ I EV+ +GGDPL+L +++ ++LK LR I H++ILR H
Sbjct: 136 --NSITDKTITMGLEYIKNNKSICEVVISGGDPLLLEDEKIDRILKDLRAIDHIEILRIH 193
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P PQRI +L+ L++ P++I IH NHP E +EEA A S LA+AGI L Q+
Sbjct: 194 SRIPCTLPQRITKDLVDILRQY-HPLFINIHFNHPDEITEEAALACSALADAGIPLGCQT 252
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GIN++ EI+ LM+ + +R+KPYY+H D+ G HF+ T++EG I+ SL
Sbjct: 253 VLLNGINNNAEIMKTLMKKLLMIRVKPYYIHQLDVVRGNHHFKATVKEGLNIMQSLYGY- 311
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGLC P Y++DLPGG GKV + K + S ++ + + +Y
Sbjct: 312 SGLCVPQYMIDLPGGGGKVPLLPQYFKTFSDDSISFINYEDKLFEY 357
>gi|148255402|ref|YP_001239987.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
gi|146407575|gb|ABQ36081.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
Length = 364
Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 179/358 (50%), Positives = 238/358 (66%), Gaps = 10/358 (2%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R TL SA DL L ++ ++ Y++A+T +A+LI+ +P+DPIARQF+P
Sbjct: 6 RPTTLRSAADLVAQGLAAPSDEATLERVAQRYAVAVTTHLADLIDADDPDDPIARQFVPS 65
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K
Sbjct: 66 ADELKAHPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
LS + AALAYI+ +IWEVI TGGDPL+LS +RL++++ L I HV+I+R H+R
Sbjct: 126 NALSEEAYRAALAYIRSHGEIWEVILTGGDPLMLSPRRLKEIMADLAAIDHVRIIRIHTR 185
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+P+ DPQRI L+ LK G ++A+HANHP E + +A +RL +AGI L+SQSVL
Sbjct: 186 LPVADPQRITAALVDALKVQGAATWVALHANHPRELNAAVRSACARLIDAGIPLVSQSVL 245
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+E GQ ++ +L+ ++SG
Sbjct: 246 LRGVNDDVATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLEHGQSLLRALRGRVSG 305
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVG----------NGSYCITDHHNIVHDYPPKS 351
LCQP Y+LD+PGGYGK + + Y + D+ H YPP +
Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYLTAEDFVEQDHAAGTQTRYRVIDYCGEAHLYPPAA 363
>gi|300723094|ref|YP_003712392.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061]
gi|297629609|emb|CBJ90212.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061]
Length = 392
Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 124/357 (34%), Positives = 197/357 (55%), Gaps = 12/357 (3%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR+ + +++DL + + I+ + Y TP A+L++ ++ N PI Q
Sbjct: 18 FQLRN-LIKTSEDLEKWIALTDNEKKAIEAVKGKYLWQSTPYYASLMDKYDANCPIRLQT 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP E+ I DP+GD ++ ++H+YP+RI+L + CPVYCR C R+
Sbjct: 77 IPHLREMKIETNSDNDPVGDTSNLKTARVIHKYPNRIVLLVSDTCPVYCRHCTRKFHTTD 136
Query: 121 QKGTVLSSK---DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
+GT S E AYI+ +I +V+ TGGDPLI K L+ ++K LR IKH+ I
Sbjct: 137 VEGTYFGSDLAASYEEDFAYIESHPEIDDVLLTGGDPLIHYDKFLEVIIKRLRSIKHINI 196
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR P+ PQRI + Q L++ P+++ H NHP E +EEA A RL GI +
Sbjct: 197 IRIGSRYPVFAPQRITEKFCQMLEKY-HPIWVNTHFNHPKEVTEEAATACDRLLRHGIPV 255
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLLKGINDD E + +L++ + +R++PYYL+H D +G SHF T+E+G++I+ ++
Sbjct: 256 QNQSVLLKGINDDVETMRSLLKALLRIRVRPYYLYHCDNVSGVSHFMTTLEKGKEIMDAM 315
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI---VHDY--PP 349
+G P Y++ GK+ ++ + +G ++ V +Y PP
Sbjct: 316 VGFETGFSVPQYVVTT--TLGKLAVNREYVITQEDGRIIGRNYKKESLDVTEYIKPP 370
>gi|302038861|ref|YP_003799183.1| l-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii]
gi|300606925|emb|CBK43258.1| L-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii]
Length = 377
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 128/352 (36%), Positives = 210/352 (59%), Gaps = 10/352 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
++ +++ +DL + + ++I++I Y + +TP + I D I +Q +
Sbjct: 6 RILAQSVVKPKDLADRLGVDPKEIEDI---VGDYPMRITPTVLATIKE--KGDAIWKQVV 60
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P + E+ E +DP+ ++ SP+ +VHRYPDR+LL + + CP+YCRFC R+ +VG
Sbjct: 61 PDRAEMADADAE-DDPLEEDLMSPVPHLVHRYPDRVLLMVTNQCPIYCRFCTRKRLVGKP 119
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L + + A+AY++E ++ +VI +GGDPL+L L+++LK+LR I H++++R
Sbjct: 120 G--FLKKGELDRAIAYLREHQEVRDVILSGGDPLLLPDHLLERILKSLRTIPHLELIRIG 177
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP P+RI P+L +K+ P Y+ +H NHP E + E A LA+AG+ L +Q+
Sbjct: 178 TRVPGSLPERITPKLCDIIKKY-HPFYMNLHFNHPDELTPEVKRACGMLADAGVPLGAQT 236
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDDPEI+ LM + R+KPYYL+ DL GT+HFR ++E G KI+ SL+
Sbjct: 237 VLLKGVNDDPEIMKRLMHQLLLARVKPYYLYQADLTKGTNHFRTSVETGLKIIKSLQGHT 296
Query: 302 SGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG+ P +++D PGG GK+ + + + S + ++ N YP S
Sbjct: 297 SGMGVPHFVIDAPGGGGKIPLLPADYLVNLDEDSAVLRNYENRTFHYPQPGS 348
>gi|114797088|ref|YP_761814.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444]
gi|114737262|gb|ABI75387.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444]
Length = 349
Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats.
Identities = 165/349 (47%), Positives = 235/349 (67%), Gaps = 3/349 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++ T A +L A +I +Q+ + ++ +Y IAL +A LI+ +P DPI Q++P
Sbjct: 1 MKPVTYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVP 60
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EELN P E +DPIGD HSP+ GIVHRYPDR+LLK+ CPVYCRFCFRRE VG +K
Sbjct: 61 SGEELNAQPGEMDDPIGDAAHSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEK 120
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G LS + +AA AYI ++ +I+EVI TGGDP+ILS R + + L I HV+++R+HS
Sbjct: 121 GDALSKAEIDAACAYIADRPEIFEVILTGGDPMILSPARAGALTRRLEAIDHVKVIRWHS 180
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+ P+R+ PE + ++ + K V++A+HANH EF+ EA+AAI RL+ AGI L+SQSV
Sbjct: 181 RVPVAAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSV 240
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+ND E LA+LMR F+ + IKPYYLH D A GTSHFR+ +EEGQ +V L++++S
Sbjct: 241 LLRGVNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELS 300
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
GL P Y+ D+PGG K ++ +I++ + ++ + Y P
Sbjct: 301 GLATPTYVADIPGGVSKAVMNLPDIERR-DDAFVLRGRDGET--YLPPG 346
>gi|288959461|ref|YP_003449802.1| lysine 2,3-aminomutase [Azospirillum sp. B510]
gi|288911769|dbj|BAI73258.1| lysine 2,3-aminomutase [Azospirillum sp. B510]
Length = 345
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 174/343 (50%), Positives = 231/343 (67%), Gaps = 2/343 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHNPNDPIARQFIPQK 64
K L S DL A L+ E D ++ +++ Y++ALTP + L +P DP+ Q++P
Sbjct: 2 KALHSVSDLVAAGLMTAEAGDAVRTVADRYAVALTPYLREALAGRTDPQDPLYAQYVPSP 61
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E + PEEREDPIGD SP+KGIVHRYPDR+LLK LH C VYCRFCFRREMVG G
Sbjct: 62 AEAHSTPEEREDPIGDVARSPVKGIVHRYPDRVLLKPLHACAVYCRFCFRREMVGP-GGE 120
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L++++ +AALAYI++ Q+WEV+ TGGDPL+LS +RL+ +++ L + HV ++R HSR+
Sbjct: 121 ALTAEELDAALAYIRDHEQVWEVVITGGDPLLLSPRRLRGIVQALSAMPHVGVVRLHSRI 180
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P DP R+ PEL++ L +IA+H NH E + AA++RL AGI L+ Q+VLL
Sbjct: 181 PAADPDRLTPELVEALTAPDLATWIAVHINHADELTAPVRAALARLVGAGIPLVGQTVLL 240
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KGIND L L R V R+KPYYLHHPDLAAGTSHFR T+ EG+ +V L+ K+SGL
Sbjct: 241 KGINDSHAALEALFRGMVRNRVKPYYLHHPDLAAGTSHFRPTLAEGRALVTGLRGKLSGL 300
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
CQP Y+LD+PGG+GK I++ G Y +TD VHDY
Sbjct: 301 CQPTYVLDIPGGHGKAPAAPAWIEEEGEERYRVTDFTGRVHDY 343
>gi|296114565|ref|ZP_06833218.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
hansenii ATCC 23769]
gi|295978921|gb|EFG85646.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
hansenii ATCC 23769]
Length = 351
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 145/341 (42%), Positives = 214/341 (62%), Gaps = 4/341 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL + +DL A L+ + ++ +++ Y+ A+ P A LI +P+DPI Q IP
Sbjct: 11 RTLRTVRDLVEAGLVSQAAQPALEAVAHDYATAIPPAFAALI--EHPDDPIGLQVIPDPA 68
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL+ EER DPIGD+ SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G V
Sbjct: 69 ELHTTTEERSDPIGDDALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG-V 127
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L E AL +++ I EVI +GGDP++LS +R+ +++ L + HV +R H+RVP
Sbjct: 128 LDDAALERALDWLRAHPAIGEVILSGGDPMMLSPRRMGHIIRALEAMPHVHTIRIHTRVP 187
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP+R+ +++ L + +++ IHANH E + +A AI R+ I +++QSVLL+
Sbjct: 188 VADPERVTADMMAAL-DTTCSLWMVIHANHARELTPQARKAIRRMQAQAIPVIAQSVLLR 246
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND P+ L +L+R V R+KPYYLH D A GTS FR+ I EGQ+++A+L+ +++GL
Sbjct: 247 GVNDTPQALEDLLRALVAARVKPYYLHQLDPAPGTSRFRVPIAEGQRLLAALRGRVTGLA 306
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
P Y+LD+PGG+GKV I + V + D H
Sbjct: 307 WPTYVLDIPGGHGKVPIGPGYLDTVEGMGMQVRDPQGRPHR 347
>gi|91976978|ref|YP_569637.1| hypothetical protein RPD_2506 [Rhodopseudomonas palustris BisB5]
gi|91683434|gb|ABE39736.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB5]
Length = 363
Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats.
Identities = 183/348 (52%), Positives = 248/348 (71%), Gaps = 4/348 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L + D++++++ Y+IA+TP IA LI+P +P+DPIARQ+IP+ EE
Sbjct: 14 TLRQPAELIAQGLAPADAQDDLEQVAQRYAIAVTPDIAALIDPDDPDDPIARQYIPRAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L LP ER+DPIGD HSP++GIVHR+ DR+LLKL+HVC VYCRFCFRREMVG K L
Sbjct: 74 LATLPIERDDPIGDGAHSPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRREMVGPGKDNSL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S T AAL YI+ +IWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+R+P+
Sbjct: 134 SGDATAAALGYIRAHPEIWEVILTGGDPLMLSPRRLADIMAELATIDHVRIIRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+P RI+ EL++ L+ GK V++A+HANHP E + A AA +R+ +AGI ++SQSVLL G
Sbjct: 194 AEPARISAELVRALRVEGKTVWMALHANHPRELTTAARAACARIIDAGIPMVSQSVLLAG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R ++ EGQ ++ +L+ ++SGLCQ
Sbjct: 254 VNDDAATLEALMRVFVECRIKPYYLHHGDLAPGTAHLRTSLAEGQALMRALRGRVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPK 350
P Y+LD+PGGYGK + + + + Y ++D+ VH YPPK
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLAADDGTAADSRYRVSDYCGDVHLYPPK 361
>gi|329114964|ref|ZP_08243719.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001]
gi|326695407|gb|EGE47093.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001]
Length = 349
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 158/342 (46%), Positives = 217/342 (63%), Gaps = 8/342 (2%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R KTL + DL A L+ +Q + + +++ HY+ A+ P +LI +P+DPI Q +P
Sbjct: 11 RRKTLRTPDDLIAAGLVPPQQHEMLDDVAQHYATAIPPAFLDLI--TSPDDPIGVQVVPS 68
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL I PEER DPIGDN SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G
Sbjct: 69 AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
VL E AL +++ QI EVI TGGDPL+LS +RL ++ L + HV +R HSR
Sbjct: 129 -VLDDAALEQALEWLRTHKQIREVILTGGDPLMLSPRRLGHIVAELSRMPHVTTIRVHSR 187
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+ DP+R+ L+ L E K +++A+H NH E SE A A + R+ GI LL QSVL
Sbjct: 188 VPVADPERVTDALLDAL-ETNKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND + L +L R VE R++PYYLH D A GT+HF + +EEGQ+++A L+ +++G
Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
L P Y+LD+PGGYGKV + ++ + D H
Sbjct: 307 LAWPLYVLDIPGGYGKVPLGPEYVQGPQQ----VKDPKGETH 344
>gi|258541375|ref|YP_003186808.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01]
gi|256632453|dbj|BAH98428.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01]
gi|256635510|dbj|BAI01479.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-03]
gi|256638565|dbj|BAI04527.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-07]
gi|256641619|dbj|BAI07574.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-22]
gi|256644674|dbj|BAI10622.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-26]
gi|256647729|dbj|BAI13670.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-32]
gi|256650782|dbj|BAI16716.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653773|dbj|BAI19700.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-12]
Length = 349
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 158/342 (46%), Positives = 216/342 (63%), Gaps = 8/342 (2%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R KTL + DL A L+ +Q + + +++ HY+ A+ P +LI P+DPI Q +P
Sbjct: 11 RRKTLRTPDDLIAAGLVPPKQHEMLDDVAQHYATAIPPAFLDLI--TAPDDPIGVQVVPS 68
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL I PEER DPIGDN SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G
Sbjct: 69 AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
VL E AL +++ QI EVI TGGDPL+LS +RL ++ L + HV +R HSR
Sbjct: 129 -VLDDAALEQALEWLRTHEQIREVILTGGDPLMLSPRRLGHIVAALSAMPHVTTIRVHSR 187
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+ DP+R+ L+ L E K +++A+H NH E SE A A + R+ GI LL QSVL
Sbjct: 188 VPVADPERVTDALLDAL-ETDKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND + L +L R VE R++PYYLH D A GT+HF + +EEGQ+++A L+ +++G
Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
L P Y+LD+PGGYGKV + ++ + D H
Sbjct: 307 LAWPLYVLDIPGGYGKVPLGPDYVQGPKQ----VKDPKGTTH 344
>gi|119384403|ref|YP_915459.1| lysine 2,3-aminomutase YodO family protein [Paracoccus
denitrificans PD1222]
gi|119374170|gb|ABL69763.1| L-lysine 2,3-aminomutase [Paracoccus denitrificans PD1222]
Length = 366
Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats.
Identities = 159/345 (46%), Positives = 216/345 (62%), Gaps = 4/345 (1%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L + +T+ L A L + + + +++ + I ++P + + P D IA QF+P
Sbjct: 21 LSQRPITTVPALVEAGLADPARAEVLDKVAAEFRIRISPAMREAM--GAPGDGIAAQFVP 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL I PEE DPI D SP G+ HRYPDR++L + C VYCRFCFRRE+VG +
Sbjct: 79 DARELQIRPEELADPISDAAFSPTPGLTHRYPDRVILHVTRTCEVYCRFCFRREVVG--E 136
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
L D AAL Y+ I EVI TGGDP++LS +R+ ++ L I HV I+RFH+
Sbjct: 137 EGTLPEPDLAAALDYVARTPAIHEVILTGGDPMVLSPRRIAALMARLEAIPHVDIVRFHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+V P RI+ ++ L V++ IH NH E + A AA++RLA+AGI LLSQ+V
Sbjct: 197 RVPVVAPSRIDAAMLAALHPRRLAVWVVIHTNHAQELTAGARAALARLADAGIPLLSQTV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+N DPE+LA+L R + R+KPYYLHH DLA GT HFR TI EGQ I+A L+ ++S
Sbjct: 257 LLKGVNADPEVLADLFRALIRNRVKPYYLHHCDLARGTGHFRTTIAEGQAIMAGLRGRLS 316
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
G C P Y+LDLPGG+GKV + ++K+ G G Y I D H+Y
Sbjct: 317 GTCLPTYVLDLPGGHGKVPLGPDHVKETGPGRYLIRDWRGKDHEY 361
>gi|225847898|ref|YP_002728061.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643772|gb|ACN98822.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 374
Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats.
Identities = 116/346 (33%), Positives = 189/346 (54%), Gaps = 6/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ L + +D+ + D K++S Y TP L + N DPI +Q +
Sbjct: 29 QIKNR-LKTLEDIKKI--LPNVNEDVFKKVSQIYHFGTTPYYIFLADRTNLEDPILKQIL 85
Query: 62 PQKEELNILPEE--REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P ++E++ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M
Sbjct: 86 PDEKEIDEKYQEGAFLDPFLEDEKSPVLGLTHRYPDRVLFRATNFCSVYCRHCMRKRMFL 145
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + ++ + YI+ I EV+ +GGDPL L +++++ ++K L I HV I+R
Sbjct: 146 EDERAR-TKQEYDVMFEYIKSNKAIKEVLVSGGDPLTLPNQKIEYIIKNLYEIDHVDIIR 204
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
SR + +P R E + + E V+I H NHP E + E A+ + + G +L+
Sbjct: 205 IGSRELVSNPFRFYDEELLEIFEKYDKVWIVTHFNHPNEITSETKKAVKNILSTGTPVLN 264
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKGINDD + NLMR+ ++++IKPYYL H D G HF+ IE+G +I+ L+
Sbjct: 265 QTVLLKGINDDKYTMENLMRSLLKVKIKPYYLFHCDPTKGVYHFKTGIEKGLEIMEHLRG 324
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
++SGL P + +DL G GKV + + NG Y ++
Sbjct: 325 RVSGLGNPTFAVDLVNGLGKVPLLPEYLISKKNGFYEFKNYQGKTV 370
>gi|85858714|ref|YP_460916.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
gi|85721805|gb|ABC76748.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
Length = 339
Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats.
Identities = 111/331 (33%), Positives = 176/331 (53%), Gaps = 5/331 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + S + L ++ + Y ++TP +LI +P+DPI Q +
Sbjct: 12 QVRNR-IRSGRQLAELLKEAPIAAGSLRAVIRTYPFSITPYYFSLIREGDPDDPIRFQCV 70
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E++ +DP+ ++ P+ G++HRY DR L+ C +YCR C R+
Sbjct: 71 PDPREVSFSLGGVDDPLEESRDMPVPGLIHRYADRCLIMATSKCMMYCRHCNRKRRW--- 127
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K A + Y+ I EVI +GGDPL L K L + L LR I HV++LR
Sbjct: 128 KAGAADRAPLRAMIDYVAATPGIREVIVSGGDPLTLPEKVLDEFLGALRAIPHVEVLRIG 187
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI L++ L++ P++ N P E + E+ A RL +AGI + +QS
Sbjct: 188 SRIPVVLPMRITVPLVRILRKHR-PLWFNTQFNSPREITPESAEACERLVDAGIPVSNQS 246
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGINDD E + L+ + ++PYYL D G HFR+ +G +++ + +
Sbjct: 247 VLLKGINDDYETMRRLLYGLQRISVRPYYLFQCDPVRGADHFRVDFWKGMEMMERISRQT 306
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
SGLC P Y++D+PGG GK+ + T ++ +
Sbjct: 307 SGLCLPRYVIDVPGGKGKMSLQTFSLLADSD 337
>gi|320354450|ref|YP_004195789.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032]
gi|320122952|gb|ADW18498.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032]
Length = 373
Score = 351 bits (902), Expect = 8e-95, Method: Composition-based stats.
Identities = 131/343 (38%), Positives = 190/343 (55%), Gaps = 9/343 (2%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T + L +A I ++ ++ + HY + ++ LI H P+ +Q +P +EL
Sbjct: 37 ITRPEQLAHALAIP---LEPLQAVHAHYPLRISAYYLQLIKQHGL--PLWKQAVPDLKEL 91
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
N DP+ + N SP+ +VH+YPDR L + C +YCRFC R+ VG V++
Sbjct: 92 NDSS-GLVDPLDEENLSPVPCLVHKYPDRALFLVCSECAMYCRFCTRKRKVGKP-DMVIN 149
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ A L Y+ I +V+ +GGDP +L RL+++LK LR I V +R +RVP
Sbjct: 150 DQTIAAGLEYLARTPAITDVLVSGGDPFMLPLSRLEQILKALRAIPSVVTIRIGTRVPCT 209
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P R+ L LK+ P+YI H NHP E + EA A RLA+AGI L Q+VLL+G+
Sbjct: 210 LPSRVTLRLAAMLKKY-HPLYINTHFNHPAEITPEAALACGRLADAGIPLGCQTVLLRGV 268
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND PE + LMR + +R+KPYYL DL GTSHFR TIE G I+ L +SG+ P
Sbjct: 269 NDSPETIKMLMRQLLRIRVKPYYLFQADLTRGTSHFRTTIETGVDIMRQLIGHVSGMAVP 328
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
Y LD PGG GK+ + H I +G + T + ++ YP +
Sbjct: 329 TYALDAPGGGGKIPLTPHYINSLG-KTLEFTTYRHLPCSYPNE 370
>gi|189425162|ref|YP_001952339.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ]
gi|189421421|gb|ACD95819.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ]
Length = 341
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 125/343 (36%), Positives = 193/343 (56%), Gaps = 11/343 (3%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
S +L + + +K +++ Y ++ A LI P+DPI +Q +P EL
Sbjct: 7 SLAELAHRFKFDET---PLKPVADLYPYRISSYYAGLI--TAPHDPIWQQCVPSLLELVD 61
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
+ DP+ + SP+ G++HRYPDR +L + + C YCRFC R+ VG G
Sbjct: 62 TEQH-PDPLDEERLSPVPGLIHRYPDRAVLLVSNRCATYCRFCMRKRRVGCAGG----QP 116
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
AAL YI Q+ ++I +GGDPL+LS L ++L LR I HV+++R SR+P+ P
Sbjct: 117 ALSAALEYIAATPQLRDIILSGGDPLMLSDDELHEILLALRRIPHVEVIRIGSRMPVTAP 176
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
RI P + L E P+Y+ H NHP E + EA A LA+ G+ L +Q+VLLKG+ND
Sbjct: 177 ARITPAFCRMLAEH-HPLYLNTHFNHPQELTSEAAQACRLLASVGVPLGNQTVLLKGVND 235
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D + L+ + L+++PYYLH DL GT+HFR +E G++++ +L+ KISG+ P +
Sbjct: 236 DSPTMQALLTGLLRLQVRPYYLHQMDLVRGTAHFRTPLEHGRQLIGALRGKISGMAIPHF 295
Query: 310 ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
++DLPGG GKV + ++ +VG + + +Y S
Sbjct: 296 VIDLPGGKGKVPVLPDSLTRVGEAVWQVQTSSGETINYFDPVS 338
>gi|332994506|gb|AEF04561.1| lysine 2,3-aminomutase YodO family protein [Alteromonas sp. SN2]
Length = 341
Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 165/317 (52%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ TS + L + + + ++ + + + + A+L+ NPNDP+ Q +P K+E
Sbjct: 23 SFTSPEKLLSFLDLPSKDYEQDSKARRLFPMRVPRHFASLMEKGNPNDPLFLQVMPLKQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+I P +DP+ + + + KG++H+Y R+LL + C V CR+CFRR + +
Sbjct: 83 FSIEPGYTKDPL-EEHDTAGKGLLHKYDSRVLLMVRTGCAVNCRYCFRRHFPYADN--AV 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI I EVIF+GGDPL+ L + K + I H++ LR H+R+P+
Sbjct: 140 NKAQWQEALDYIAGNPAINEVIFSGGDPLMAKDDHLAALAKEIAAIPHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R++ + + +HANH E S + + +L G+ LL+QSVLLK
Sbjct: 200 VLPERLDNAFFDWFTQLPIQKILVLHANHSNEVSPALKSRLEKLRTHGVTLLNQSVLLKD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + + L + + PYYLH D G SHF ++ ++ ++I+ +++ G
Sbjct: 260 VNDSADAVCELSERLFDAGVMPYYLHVLDKVEGASHFYVSDDKARQIMQEAIKRLPGFLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P + ++ GK ID
Sbjct: 320 PKLVREIGAQPGKTPID 336
>gi|162146333|ref|YP_001600792.1| L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus PAl 5]
gi|209543664|ref|YP_002275893.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161784908|emb|CAP54451.1| putative L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531341|gb|ACI51278.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 382
Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats.
Identities = 149/344 (43%), Positives = 203/344 (59%), Gaps = 8/344 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+T+ L A L+ + ++E++ Y+ A+ P A LI P+DPI Q +P
Sbjct: 26 RTVRDVAGLVAAGLVSPGAVPALEEVARQYATAIPPAFAGLITR--PDDPIGLQVVPDAS 83
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I P ER DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G V
Sbjct: 84 ELTIAPHERMDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGPDGG-V 142
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L E AL +++ I EVI TGGDPL+LS +RL +++ L + HV +R HSRVP
Sbjct: 143 LDDAALERALDWLRTHPAIREVILTGGDPLMLSPRRLGAIVRALGDMPHVTTIRIHSRVP 202
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP RI L + E + +++ +HANH EF+ A AA+ R+ I +L QSVLL+
Sbjct: 203 VADPGRITDALADAM-ETDRAMWVVVHANHAREFTPAARAALRRIQARAIPVLGQSVLLR 261
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND L L R VE R+KPYYLH D A GT+ F + I EG++++A L+ +++GL
Sbjct: 262 GVNDSVAALEALFRAMVEARMKPYYLHQLDAAPGTARFHVPIAEGRRLLAGLRGRVTGLA 321
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGN----GSYCITDHHNIVH 345
P Y LD+PGGYGKV + ++ G + D H
Sbjct: 322 WPTYTLDIPGGYGKVPLGPDYLEPEGPAPDGTGLSVRDPAGGRH 365
>gi|156932380|ref|YP_001436296.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894]
gi|156530634|gb|ABU75460.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894]
Length = 342
Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + I E++ ++ +++ + A + NP DP+ RQ + +EE
Sbjct: 23 ITDPDELLHLLNIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + +S + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 83 FVAAPGFTTDPL-EEQNSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ +AAL YI ++ E+IF+GGDPL+ L+ ++ L I H++ LR HSR+PI
Sbjct: 140 NKRNWQAALDYIAAHPELDEIIFSGGDPLMAKDHELEWLVAHLEAIPHIRRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ L E V + H NH E + +++L AG+ LL+QSVLLKG
Sbjct: 200 VIPARITDALVRLLGETRLQVLLVNHINHAQEIDDAFREGMAKLRAAGVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LA L + + PYYLH D G +HF ++ +E + I+ L ++SG
Sbjct: 260 VNDNAATLAALSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSRVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|325970648|ref|YP_004246839.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
gi|324025886|gb|ADY12645.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
Length = 363
Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats.
Identities = 127/350 (36%), Positives = 198/350 (56%), Gaps = 3/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + +TS + L + +++ +++N + + NLI+P++P+DPI RQ +
Sbjct: 4 QQQSTIITSKETLGQYLALAEDEWLFDADLTNTLPLKIPMYFLNLIDPNDPDDPIRRQVV 63
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ +E IL EE+ DP+ + N+S + ++HRY R+ VCP+YCR CFRR G+
Sbjct: 64 PRWQEQRILDEEQLDPLCEVNYSVTERLIHRYQSRVAFLTTDVCPLYCRHCFRRRFTGTF 123
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+G S + E A Y+ + E++FTGGD LS K L+ +++T R + ++R
Sbjct: 124 QG-PASKEQIEKAAEYVAVHPAVKEILFTGGDVFTLSTKALEAMIQTFRDKRPDLVIRLC 182
Query: 182 SRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P P RI+ +LI LK+ P Y+ NH E +E+AI A+ +AGI ++Q
Sbjct: 183 SRMPASYPMRIDADLIAMLKQFNTAPFYLMTQFNHRRELTEQAIQAVRMFVDAGIPAMNQ 242
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+NDD +L L T V RIKPYYL DL +GT+HFR+ ++EG I A L+++
Sbjct: 243 TVLLKGVNDDVCVLEELCNTLVFNRIKPYYLFQGDLVSGTAHFRVPLKEGLAIEAELRKR 302
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN-GSYCITDHHNIVHDYPP 349
+SGL P Y +DLP G GKV + + + G + + YP
Sbjct: 303 LSGLAMPLYAIDLPQGGGKVPLMQGYLSEQSGCGLWSFRTVEGEIRTYPD 352
>gi|218780437|ref|YP_002431755.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
gi|218761821|gb|ACL04287.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
Length = 353
Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 189/347 (54%), Gaps = 10/347 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q + S L I + + + Y + +T +LI N DPIARQ
Sbjct: 14 LQAMADCIISPDGLSRILPID---FQAMGKAAETYPMRITKYFLSLIREQN--DPIARQV 68
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EEL+ DP+ + + SP+ G++HRYP +L ++ + C VYCR C R+ VG
Sbjct: 69 IPSAEELSDASL-SPDPLCEEDQSPVPGLIHRYPHHVLFQVENRCAVYCRHCLRKRKVGG 127
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
K ++++ + YI+ +I EV+ +GGDPL++ +L +L+ LR I HV+ LR
Sbjct: 128 VK--PVTAEALAQGVDYIRSNQEIREVVLSGGDPLVMEDDKLLDLLRRLRAINHVRTLRV 185
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P V PQRI PEL + L + P+Y+ I NHP E + E+ A LA+ G+ L Q
Sbjct: 186 HSRIPGVLPQRITPELAKGLADF-HPLYMNIQFNHPREITPESEEACRILADQGVPLGCQ 244
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+NDD +L LM + +R++PYYLH D G +HF + I G K++ +L+
Sbjct: 245 TVLLKGVNDDEAVLRELMEELLRIRVRPYYLHQLDRVKGAAHFHVPISRGVKLMQALRGS 304
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
I G P Y++DLPGG GK + +I + + + + Y
Sbjct: 305 IPGTAIPHYVVDLPGGGGKAPL-PESIVGREENAILVRNFEGKIFRY 350
>gi|58038709|ref|YP_190673.1| lysine 2,3-aminomutase [Gluconobacter oxydans 621H]
gi|58001123|gb|AAW60017.1| Lysine 2,3-aminomutase [Gluconobacter oxydans 621H]
Length = 356
Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats.
Identities = 145/344 (42%), Positives = 213/344 (61%), Gaps = 6/344 (1%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ TL + DL +A L + ++ + +++A+ P +LI +P+DPIARQ IP
Sbjct: 18 KRHTLRTPSDLIDAGLATEADRATLEAVGERFTMAIPPAFRDLI--THPDDPIARQVIPD 75
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EL LP E DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G
Sbjct: 76 ARELVTLPHEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGP-GG 134
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+LS+ E AL ++++ I E+I TGGDPL+L+ +RL+ ++++L I H++ +R HSR
Sbjct: 135 GLLSNAQLETALDWVRQHPDIREIILTGGDPLMLAPRRLKHIVQSLSGIPHIETIRIHSR 194
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+ DP R+ EL+ + E + +++ IHANH E + A AI + + I +LSQSVL
Sbjct: 195 VPVADPARMTEELLDAM-ETDRAMWLVIHANHASELTPHATKAIRAVLSRAIPVLSQSVL 253
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND E L L+R ++ R+KPYYLHH D AAGT HF + + +GQ ++ L+ +++G
Sbjct: 254 LRGVNDTVESLEALLRALIKARVKPYYLHHLDAAAGTGHFHVPVAQGQALLRQLRGRVTG 313
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
L P Y+LD+P G GKV I + G ++ +
Sbjct: 314 LAWPTYVLDIPSGRGKVPIGPEYLDPASPG--TVSTPDGEACSF 355
>gi|149922522|ref|ZP_01910953.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
gi|149816630|gb|EDM76124.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
Length = 316
Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats.
Identities = 136/311 (43%), Positives = 191/311 (61%), Gaps = 3/311 (0%)
Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
+ + I+ +P+DPI RQ +P EL LP ER DPIGD HSP+ + HRYP R L
Sbjct: 1 MPQSYLDKIDWQDPDDPIRRQAVPSPLELESLPGERPDPIGDAAHSPVPRLTHRYPTRAL 60
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L +VC +YCR CFR+E + + + S E ALAY+ E +++ EVI TGGDPL LS
Sbjct: 61 LYPTYVCSMYCRHCFRKESI-NDEAAGFSMAALEPALAYLAEHTELREVILTGGDPLTLS 119
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPY 217
+L+ + L I+H+ +LR H+RVP+ P R+ P L+ L+ + + V + H NHP
Sbjct: 120 DVQLEALRSRLDAIEHLSLLRVHTRVPVTLPTRVTPGLVAALRGDGSRMVCVVTHFNHPR 179
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDL 276
E ++A+ A RL AG +LL+QSVLL+G+ND+ E+LA L V KPYYLHH DL
Sbjct: 180 ELDDDALTACRRLREAGFMLLNQSVLLRGVNDEVEVLAELFEKLVYRAGAKPYYLHHCDL 239
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
G SHFR +I+ G++++A+L+ +ISGLC P Y+LDLPGG GKV I + +C
Sbjct: 240 TRGVSHFRTSIDRGRELMAALRGRISGLCLPEYVLDLPGGDGKVPIGPSFVHARDGQRWC 299
Query: 337 ITDHHNIVHDY 347
+ +H Y
Sbjct: 300 FSTWAGGLHHY 310
>gi|260599504|ref|YP_003212075.1| kamA family protein YjeK [Cronobacter turicensis z3032]
gi|260218681|emb|CBA34029.1| Uncharacterized kamA family protein yjeK [Cronobacter turicensis
z3032]
Length = 342
Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 101/317 (31%), Positives = 168/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + I E++ ++ +++ + A + NP DP+ RQ + +EE
Sbjct: 23 ITDPDELLHLLNIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTSREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + +S + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 83 FVAAPGFTTDPL-EEQNSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ +AAL YI +++ E+IF+GGDPL+ L+ ++ + I H++ LR HSR+PI
Sbjct: 140 NKRNWQAALDYIAAHAELDEIIFSGGDPLMAKDHELEWLVANIEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ L E V + H NH E + A +++L AG+ LL+QSVLLKG
Sbjct: 200 VIPARITDALVRLLGETRLQVLLVNHINHAQEIDDAFRAGMTKLRAAGVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ L L + + PYYLH D G +HF ++ +E + I+ L ++SG
Sbjct: 260 VNDNAATLTALSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|116751432|ref|YP_848119.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116700496|gb|ABK19684.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB]
Length = 360
Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats.
Identities = 123/341 (36%), Positives = 186/341 (54%), Gaps = 9/341 (2%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+++ Q L + E+ Y LI DP+ RQ +P EL
Sbjct: 11 ISTLQALSRD---PGADGAALSEVVRRYPFRTNEYYQGLIRQT--GDPLWRQVMPDAMEL 65
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ +DP+ + SP+ +VHRYP+R+L + H C ++CRFC R+ S ++
Sbjct: 66 SDDA-GLQDPLAEEALSPVPNLVHRYPNRVLWLVSHECALHCRFCTRKRRWSSP--LPMT 122
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ L YI+E Q+ +V+ +GGDPL+L RL+ +L LR+I HV +LR +RVP
Sbjct: 123 GELLRDGLRYIRENPQVNDVLLSGGDPLLLDPSRLETILGELRHIPHVAVLRIGTRVPCA 182
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+R+ EL L P+++ IH NHP E +EE+ A + LA+AGI L SQ+VLL+ +
Sbjct: 183 LPERVTGELATMLARH-HPLFLNIHFNHPREITEESRRACALLADAGIPLGSQTVLLRDV 241
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDD +L L +T + LR++PYYL DL GT+HFR + G +IVA L+ +ISG+ P
Sbjct: 242 NDDAHVLGELFQTLLGLRVRPYYLMQMDLTRGTAHFRTPLSRGLEIVARLRNRISGMAVP 301
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
++DLPGG GKV + + I+ +G + YP
Sbjct: 302 QLVVDLPGGLGKVPLVPNRIEHIGEDHVVFRSYQGAPCRYP 342
>gi|310816895|ref|YP_003964859.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium
vulgare Y25]
gi|308755630|gb|ADO43559.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium
vulgare Y25]
Length = 343
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 152/343 (44%), Positives = 205/343 (59%), Gaps = 14/343 (4%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
LI ++ ++ + + +TP + I + D + QF+P + ELN+LP E DP
Sbjct: 4 GLISPADAAALRPVTETFRMRITPQMRTAITRAD--DGVGLQFVPDRRELNVLPSELTDP 61
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
IGD HSP KGI HRYPDR++ + VC VYCRFCFRRE+VG VL + D AAL Y
Sbjct: 62 IGDGAHSPTKGITHRYPDRVIFHVTQVCEVYCRFCFRREVVGENG--VLPAGDVAAALDY 119
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
I+ I EVI TGGDPL LS +RL ++ L I HV ++R H+RVP+V P RI PE+I
Sbjct: 120 IRRTPAINEVILTGGDPLSLSPRRLHEITTALAAIPHVGLMRIHTRVPVVAPNRITPEMI 179
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEA----------IAAISRLANAGIILLSQSVLLKGI 247
L G ++ +H NHP EF EA +AA+ L AG+ LLSQSVLL+G+
Sbjct: 180 AALTAPGLQTWLVLHTNHPQEFIPEAGGALEFIPEAVAALDLLRTAGVPLLSQSVLLRGV 239
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND +L +L T + L +KPYYLHH DLA GTSH+R TI G+ ++ +L+ +ISG P
Sbjct: 240 NDSVAVLKSLFTTLLRLGVKPYYLHHCDLARGTSHYRTTIAAGRALMRALRGQISGSALP 299
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
Y+LD+PGG+GKV I +G + +TD + H Y
Sbjct: 300 TYVLDIPGGFGKVPITADYFDGGADGRWQVTDPNGGTHIYHDP 342
>gi|288937552|ref|YP_003441611.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola
At-22]
gi|288892261|gb|ADC60579.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola
At-22]
Length = 342
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 106/323 (32%), Positives = 171/323 (52%), Gaps = 5/323 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + +TS +L + ++ + +E + + + + NPNDP+ RQ
Sbjct: 18 QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ +EE + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 77 LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYA 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR
Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+PIV P RI L + + V + H NH E +E AA++ L AG+ LL+Q
Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAMLRQAGVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E ++I+ L
Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
ISG P ++ G K +D
Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLD 336
>gi|254292405|ref|YP_003058428.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC
49814]
gi|254040936|gb|ACT57731.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC
49814]
Length = 348
Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats.
Identities = 165/344 (47%), Positives = 236/344 (68%), Gaps = 1/344 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
KTL SAQD N + E I +S Y++A+T +A+ + + +DP+ RQF+P +
Sbjct: 3 KTLKSAQDFKNLGITSPEITQNIDTVSTKYAVAMTTELADCVKNPSSDDPVLRQFLPLID 62
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL LPEEREDPIGD ++P++GIVHR+ DR+LLK++ +CPVYCRFCFRREMVG K +
Sbjct: 63 ELTTLPEEREDPIGDWPNTPVEGIVHRHKDRVLLKIVSICPVYCRFCFRREMVGPDKDNM 122
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA+ YI +IWEVI TGGDP++LS +R +++ + L I HV+I+R+H+R+P
Sbjct: 123 LRPEQLDAAIDYIANHPEIWEVILTGGDPMMLSPRRARELTQRLEAIPHVKIIRWHTRMP 182
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ P + E Q +K + K V++A+HANH EFS A A + L +AGI ++SQSVLLK
Sbjct: 183 VAKPDIVTAEYAQAIKSSTKSVFVALHANHANEFSNAAKQACANLIDAGIPMVSQSVLLK 242
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L++LMRTFVE RI+PYYLHHPD A GTSHFR+++EEGQK+V L+ +SGLC
Sbjct: 243 GVNDNLDALSDLMRTFVENRIRPYYLHHPDFAPGTSHFRVSVEEGQKLVQGLRNTLSGLC 302
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
P Y++D+PGG K + +++ +G + YPP
Sbjct: 303 TPTYVVDIPGGVSKAIATPSDAREI-DGQLSLRGQDGQWRAYPP 345
>gi|152973019|ref|YP_001338165.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150957868|gb|ABR79898.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 342
Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats.
Identities = 106/323 (32%), Positives = 170/323 (52%), Gaps = 5/323 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + +TS +L + ++ + +E + + + + NPNDP+ RQ
Sbjct: 18 QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ +EE + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 77 LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYA 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR
Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+PIV P RI L + + V + H NH E E AA++ L AG+ LL+Q
Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAMLRQAGVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E ++I+ L
Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
ISG P ++ G K +D
Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLD 336
>gi|46203355|ref|ZP_00051632.2| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum
MS-1]
Length = 312
Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats.
Identities = 163/309 (52%), Positives = 213/309 (68%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L S L A LI + ++ ++ Y++++T +A LI P P+DPIARQF+P+ EE
Sbjct: 4 ALKSTAALARAGLIDAAVLPVLERVAARYAVSVTADMAELIEPGRPDDPIARQFVPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD+ H P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG + L
Sbjct: 64 LETNPRERADPIGDDVHEPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPEGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + A YI + +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAVAYRYIADHPEIWEVVVTGGDPFALSPRRLAGIAEALAAIPHVRVLRFHTRVPM 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P RI+ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARIDERLVAALKRFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD + L LMR FVE RIKPYYLH DLA GT H R T+ EGQ ++ L+ ++SGL Q
Sbjct: 244 VNDDADTLEALMRGFVENRIKPYYLHQGDLAPGTGHLRTTLPEGQALMRRLRGRLSGLAQ 303
Query: 307 PFYILDLPG 315
P Y+LD+P
Sbjct: 304 PLYVLDIPA 312
>gi|206577764|ref|YP_002240896.1| KamA family protein [Klebsiella pneumoniae 342]
gi|290512290|ref|ZP_06551657.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55]
gi|206566822|gb|ACI08598.1| KamA family protein [Klebsiella pneumoniae 342]
gi|289775285|gb|EFD83286.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55]
Length = 342
Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats.
Identities = 106/323 (32%), Positives = 171/323 (52%), Gaps = 5/323 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + +TS +L + ++ + +E + + + + NPNDP+ RQ
Sbjct: 18 QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ +EE + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 77 LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYA 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR
Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+PIV P RI L + + V + H NH E +E AA++ L AG+ LL+Q
Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAMLRQAGVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E ++I+ L
Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
ISG P ++ G K +D
Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLD 336
>gi|300920832|ref|ZP_07137231.1| KamA family protein [Escherichia coli MS 115-1]
gi|300412197|gb|EFJ95507.1| KamA family protein [Escherichia coli MS 115-1]
Length = 342
Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 168/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLSAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|42524711|ref|NP_970091.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100]
gi|39576921|emb|CAE78150.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100]
Length = 428
Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats.
Identities = 116/346 (33%), Positives = 191/346 (55%), Gaps = 4/346 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLRH +L + D + ++ +++ TP A+L + I + +
Sbjct: 54 QLRH-SLKTQDDFAQHFELSADEKAAFVGGKELFNVRTTPYYASL-AKGDAGQSIRQILM 111
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P + E+ ++ DP+G+ + ++HRY DR+L + +C VYCRFC R+ G +
Sbjct: 112 PHRFEIEEGDQQMLDPLGERQNKAAPRLIHRYSDRVLFLITDICSVYCRFCTRKHFTGQE 171
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +++ E AL+YI+ + I EVI +GGDPL +S K+L +VL LR I+HV+I+R
Sbjct: 172 Q-AFIRNEEYEQALSYIRSHTGIREVILSGGDPLTVSDKQLDRVLGDLRAIEHVEIIRIG 230
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ +L+Q LK+ KPV++ H NHP E + EA+ A+ RL + G+ +++Q
Sbjct: 231 SRMPVVCPMRVTEDLVQILKKH-KPVFLMSHFNHPDELTAEAVEALERLVDNGVPVMNQM 289
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GIN+ P ++ L R + LR+KPYY+ D + GT H R ++E+ +I L +
Sbjct: 290 VLLNGINNHPALVQALNRRLLFLRVKPYYMFQCDPSLGTDHLRTSVEDSLEIQKELWGHL 349
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P LD+P G GK + + + + +Y
Sbjct: 350 SGLAMPNLSLDIPNGGGKTYLVPNFEVGQEGRTRHYVGWDGVKAEY 395
>gi|293417652|ref|ZP_06660274.1| kamA family protein yjeK [Escherichia coli B185]
gi|291430370|gb|EFF03368.1| kamA family protein yjeK [Escherichia coli B185]
Length = 342
Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 168/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|92114650|ref|YP_574578.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043]
gi|91797740|gb|ABE59879.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043]
Length = 356
Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 3/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLR + +L + + + + + + I P +P+DP+ RQ +
Sbjct: 38 QLR-DAVRDPHELCRRLDLDTAWLGGAETGHALFPVRVPHAYLARIRPGDPDDPLLRQVL 96
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + DP+ + H P G++H+Y +R+LL C + CR+CFRR ++
Sbjct: 97 PLDRESEPVAGFVGDPLEEAEHRPRPGLIHKYRNRVLLIASPACAINCRYCFRRHFPYAE 156
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S E L Y+++ + I E IF+GGDPL +RL + + L I H++ LR H
Sbjct: 157 N--SPSRGQWETTLDYLRQDTSINEAIFSGGDPLASPDRRLAWLAERLADIPHLKRLRLH 214
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+P+V P R++ L+ L + +H NHP E A+ RL AG+ LL+QS
Sbjct: 215 TRLPVVIPDRVDSPLLDWLAATRLQTVMVVHINHPNEIDAGVADAMQRLRGAGVTLLNQS 274
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+NDD E LA L E+ I PYYLH D G +HF + E +V +L+ ++
Sbjct: 275 VLLRGVNDDVETLARLSERLFEVGILPYYLHVLDPVEGAAHFDVPDAEAVSLVETLRTQL 334
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
+G P + ++PG K +
Sbjct: 335 AGFLMPRLVREVPGEASKTPL 355
>gi|82779418|ref|YP_405767.1| hypothetical protein SDY_4389 [Shigella dysenteriae Sd197]
gi|81243566|gb|ABB64276.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 342
Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 168/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|15834381|ref|NP_313154.1| hypothetical protein ECs5127 [Escherichia coli O157:H7 str. Sakai]
gi|168747993|ref|ZP_02773015.1| KamA family protein [Escherichia coli O157:H7 str. EC4113]
gi|168755334|ref|ZP_02780341.1| KamA family protein [Escherichia coli O157:H7 str. EC4401]
gi|168761014|ref|ZP_02786021.1| KamA family protein [Escherichia coli O157:H7 str. EC4501]
gi|168766424|ref|ZP_02791431.1| KamA family protein [Escherichia coli O157:H7 str. EC4486]
gi|168774523|ref|ZP_02799530.1| KamA family protein [Escherichia coli O157:H7 str. EC4196]
gi|168780577|ref|ZP_02805584.1| KamA family protein [Escherichia coli O157:H7 str. EC4076]
gi|168784782|ref|ZP_02809789.1| KamA family protein [Escherichia coli O157:H7 str. EC869]
gi|168802345|ref|ZP_02827352.1| KamA family protein [Escherichia coli O157:H7 str. EC508]
gi|195935938|ref|ZP_03081320.1| hypothetical protein EscherichcoliO157_05645 [Escherichia coli
O157:H7 str. EC4024]
gi|208808559|ref|ZP_03250896.1| KamA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208813031|ref|ZP_03254360.1| KamA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208818769|ref|ZP_03259089.1| KamA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209396148|ref|YP_002273691.1| KamA family protein [Escherichia coli O157:H7 str. EC4115]
gi|217325173|ref|ZP_03441257.1| KamA family protein [Escherichia coli O157:H7 str. TW14588]
gi|254796168|ref|YP_003081005.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359]
gi|261225269|ref|ZP_05939550.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK2000]
gi|261255480|ref|ZP_05948013.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK966]
gi|291285561|ref|YP_003502379.1| KamA family protein [Escherichia coli O55:H7 str. CB9615]
gi|13364604|dbj|BAB38550.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187769928|gb|EDU33772.1| KamA family protein [Escherichia coli O157:H7 str. EC4196]
gi|188017568|gb|EDU55690.1| KamA family protein [Escherichia coli O157:H7 str. EC4113]
gi|189001809|gb|EDU70795.1| KamA family protein [Escherichia coli O157:H7 str. EC4076]
gi|189357403|gb|EDU75822.1| KamA family protein [Escherichia coli O157:H7 str. EC4401]
gi|189363903|gb|EDU82322.1| KamA family protein [Escherichia coli O157:H7 str. EC4486]
gi|189368518|gb|EDU86934.1| KamA family protein [Escherichia coli O157:H7 str. EC4501]
gi|189374875|gb|EDU93291.1| KamA family protein [Escherichia coli O157:H7 str. EC869]
gi|189375646|gb|EDU94062.1| KamA family protein [Escherichia coli O157:H7 str. EC508]
gi|208728360|gb|EDZ77961.1| KamA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208734308|gb|EDZ82995.1| KamA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208738892|gb|EDZ86574.1| KamA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209157548|gb|ACI34981.1| KamA family protein [Escherichia coli O157:H7 str. EC4115]
gi|209750478|gb|ACI73546.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750480|gb|ACI73547.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750482|gb|ACI73548.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750484|gb|ACI73549.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750486|gb|ACI73550.1| hypothetical protein ECs5127 [Escherichia coli]
gi|217321394|gb|EEC29818.1| KamA family protein [Escherichia coli O157:H7 str. TW14588]
gi|254595568|gb|ACT74929.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359]
gi|290765434|gb|ADD59395.1| KamA family protein [Escherichia coli O55:H7 str. CB9615]
gi|320190719|gb|EFW65369.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. EC1212]
gi|320638907|gb|EFX08553.1| putative lysine aminomutase [Escherichia coli O157:H7 str. G5101]
gi|320644276|gb|EFX13341.1| putative lysine aminomutase [Escherichia coli O157:H- str. 493-89]
gi|320649594|gb|EFX18118.1| putative lysine aminomutase [Escherichia coli O157:H- str. H 2687]
gi|320654990|gb|EFX22951.1| putative lysine aminomutase [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320660497|gb|EFX27958.1| putative lysine aminomutase [Escherichia coli O55:H7 str. USDA
5905]
gi|320665766|gb|EFX32803.1| putative lysine aminomutase [Escherichia coli O157:H7 str. LSU-61]
gi|326341801|gb|EGD65584.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1125]
gi|326346624|gb|EGD70358.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1044]
Length = 342
Score = 345 bits (885), Expect = 8e-93, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 168/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|157147882|ref|YP_001455201.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895]
gi|157085087|gb|ABV14765.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895]
Length = 342
Score = 344 bits (884), Expect = 8e-93, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I ++ + ++ +++ + + NPNDP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLNIDADEKLLAGRDAKRLFALRVPRSFIARMEKGNPNDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 83 FVTAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L + + + H NH E + A++ L NAG+ LL+QSVLL+G
Sbjct: 200 VIPARITDGLAARFARSSLQILLVNHINHANEIDDTFRQAMTTLRNAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L ++SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARRIMRELLTRVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|331655977|ref|ZP_08356965.1| putative radical SAM domain protein [Escherichia coli M718]
gi|331046331|gb|EGI18421.1| putative radical SAM domain protein [Escherichia coli M718]
Length = 342
Score = 344 bits (884), Expect = 9e-93, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|300940634|ref|ZP_07155196.1| KamA family protein [Escherichia coli MS 21-1]
gi|306815636|ref|ZP_07449785.1| putative lysine aminomutase [Escherichia coli NC101]
gi|331650273|ref|ZP_08351345.1| putative radical SAM domain protein [Escherichia coli M605]
gi|331671299|ref|ZP_08372097.1| putative radical SAM domain protein [Escherichia coli TA280]
gi|281181244|dbj|BAI57574.1| conserved hypothetical protein [Escherichia coli SE15]
gi|300454586|gb|EFK18079.1| KamA family protein [Escherichia coli MS 21-1]
gi|305851298|gb|EFM51753.1| putative lysine aminomutase [Escherichia coli NC101]
gi|330908490|gb|EGH37009.1| lysine 2,3-aminomutase [Escherichia coli AA86]
gi|331040667|gb|EGI12825.1| putative radical SAM domain protein [Escherichia coli M605]
gi|331071144|gb|EGI42501.1| putative radical SAM domain protein [Escherichia coli TA280]
Length = 342
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NPNDP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|301023473|ref|ZP_07187251.1| KamA family protein [Escherichia coli MS 69-1]
gi|300396989|gb|EFJ80527.1| KamA family protein [Escherichia coli MS 69-1]
Length = 342
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NPNDP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|260463114|ref|ZP_05811317.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium
opportunistum WSM2075]
gi|259031235|gb|EEW32508.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium
opportunistum WSM2075]
Length = 366
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 137/344 (39%), Positives = 199/344 (57%), Gaps = 4/344 (1%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ + +DL A + + ++ + + + + +LI+ ++P DPI Q IP
Sbjct: 20 RQGVRHVRDLA-ALPLSPAERQAAQQAATLHKVRVPKTYLDLIDWNDPADPIRAQVIPSP 78
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL E DPI D++ SP+ + HR+ DR+LL + C VYCRFCFR+E + + G
Sbjct: 79 DELVEAEGELGDPIADHDFSPVPRLTHRHGDRVLLFPTYQCAVYCRFCFRKESL-TSIGR 137
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + E ALAYI + S+I EVI TGGDPL LS K L ++ + I HV++LR H+RV
Sbjct: 138 GYTREALEPALAYIADHSEIREVILTGGDPLSLSDKALAEIFMRIEAIPHVRLLRIHTRV 197
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+ P RI P L++ L+ V + H NH E ++ A AA + AG +LL+QSVLL
Sbjct: 198 PVALPSRITPGLVEALQG-RLMVTVVTHFNHAREITDAAEAACRTMRQAGFVLLNQSVLL 256
Query: 245 KGINDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
KG+ND E+L L R L +KPYYLHH DLA G +H R TI +GQ +V +L+ ++SG
Sbjct: 257 KGVNDSVEVLEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALVEALRARLSG 316
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+C P Y+LDLP G GKV + +I+ S+ I V Y
Sbjct: 317 ICNPVYVLDLPEGGGKVPLGPCSIEGRDGESWRIRGQDGAVRGY 360
>gi|26251039|ref|NP_757079.1| hypothetical protein c5231 [Escherichia coli CFT073]
gi|227886810|ref|ZP_04004615.1| lysine 2,3-aminomutase [Escherichia coli 83972]
gi|300975007|ref|ZP_07172811.1| KamA family protein [Escherichia coli MS 45-1]
gi|301047630|ref|ZP_07194695.1| KamA family protein [Escherichia coli MS 185-1]
gi|26111471|gb|AAN83653.1|AE016771_164 Hypothetical protein yjeK [Escherichia coli CFT073]
gi|227836152|gb|EEJ46618.1| lysine 2,3-aminomutase [Escherichia coli 83972]
gi|300300482|gb|EFJ56867.1| KamA family protein [Escherichia coli MS 185-1]
gi|300410421|gb|EFJ93959.1| KamA family protein [Escherichia coli MS 45-1]
gi|307556316|gb|ADN49091.1| hypothetical protein YjeK [Escherichia coli ABU 83972]
gi|315294049|gb|EFU53401.1| KamA family protein [Escherichia coli MS 153-1]
Length = 342
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E+ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDAEEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|229527414|ref|ZP_04416806.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)]
gi|229335046|gb|EEO00531.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)]
Length = 340
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 160/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E I P DP+ + N++ G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLSAEFEIHPGYSHDPLDEQNNTV-PGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVI +GGDPL+ L +++ + I H++ LR
Sbjct: 136 DNKG--SKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVEMFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E+
Sbjct: 254 GVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|218707761|ref|YP_002415280.1| putative lysine aminomutase [Escherichia coli UMN026]
gi|293402777|ref|ZP_06646874.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412]
gi|293407873|ref|ZP_06651713.1| kamA family protein yjeK [Escherichia coli B354]
gi|298378306|ref|ZP_06988190.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302]
gi|300899683|ref|ZP_07117911.1| KamA family protein [Escherichia coli MS 198-1]
gi|331665813|ref|ZP_08366707.1| putative radical SAM domain protein [Escherichia coli TA143]
gi|218434858|emb|CAR15796.1| putative lysine aminomutase [Escherichia coli UMN026]
gi|284924332|emb|CBG37448.1| radical SAM superfamily protein [Escherichia coli 042]
gi|291429692|gb|EFF02706.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412]
gi|291472124|gb|EFF14606.1| kamA family protein yjeK [Escherichia coli B354]
gi|298280640|gb|EFI22141.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302]
gi|300356752|gb|EFJ72622.1| KamA family protein [Escherichia coli MS 198-1]
gi|331056864|gb|EGI28858.1| putative radical SAM domain protein [Escherichia coli TA143]
Length = 342
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NPNDP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVEHFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|146309997|ref|YP_001175071.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638]
gi|145316873|gb|ABP59020.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638]
Length = 342
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 105/317 (33%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+TS +L I E + +E +++ + + NPNDP+ +Q + K+E
Sbjct: 23 ITSPDELLRLLNIDSDENMLAGREAKRLFALRVPRAFVARMEKGNPNDPLLKQVLTSKDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + +S + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVTAPGFSTDPL-EEQNSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENPG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L+ + + + H NH E E +A+ RL NAG+ LL+QSVLL+G
Sbjct: 200 VIPARITDGLVSRFAASPLQILLVNHINHANEIDETFRSAMMRLRNAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LA+L + + PYYLH D G +HF ++ EE ++IV L +SG
Sbjct: 260 VNDNAQTLADLSNALFDASVMPYYLHVLDRVQGAAHFMVSDEEARQIVRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|95931361|ref|ZP_01314073.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95132577|gb|EAT14264.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 345
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 126/325 (38%), Positives = 182/325 (56%), Gaps = 6/325 (1%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
+ ++ Y + +TP LI + DP+ Q IP EL DP+ +
Sbjct: 25 DSHALAQVVERYPMRITPHQFELIRQAD--DPLGCQVIPDPRELLDDSL-LVDPLNEEQL 81
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
SP+ +VHRYP R+LL + C YCRFC R+ VG +S D + YI E +
Sbjct: 82 SPVPHLVHRYPYRVLLLVAGSCFSYCRFCTRKRKVGCSS-MSVSLGDILKGIDYIAEHPE 140
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ EVI +GGDPL +S + L VL L I H+Q++R SR P+V P+RI L L+
Sbjct: 141 VNEVILSGGDPLTMSDRLLDDVLARLSRIPHLQVVRIGSRAPVVMPERITDALCALLRRY 200
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+PVY H NHP E +E + A RL +G+I+ +Q+VLL+G+ND+ E L L T
Sbjct: 201 -QPVYFLTHFNHPREITEATVEACQRLVRSGVIVANQTVLLRGVNDNSETLFKLFHTLYR 259
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
L+I+PYYLH DL GTSHFR +E+G I+ L+ +SGL P YI+DLPGG+GKV +
Sbjct: 260 LQIRPYYLHQMDLTCGTSHFRTRLEDGIAIMDDLRGPLSGLAVPSYIVDLPGGHGKVPVT 319
Query: 324 THNIKKVGNGSYCITDHHNIVHDYP 348
++++G+ + + + DYP
Sbjct: 320 PDYVQRLGDHA-RLRAADGTLVDYP 343
>gi|218702846|ref|YP_002410475.1| putative lysine aminomutase [Escherichia coli IAI39]
gi|218372832|emb|CAR20711.1| putative lysine aminomutase [Escherichia coli IAI39]
Length = 342
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVFTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|91213696|ref|YP_543682.1| hypothetical protein UTI89_C4744 [Escherichia coli UTI89]
gi|110644505|ref|YP_672235.1| hypothetical protein ECP_4390 [Escherichia coli 536]
gi|117626495|ref|YP_859818.1| putative lysine aminomutase [Escherichia coli APEC O1]
gi|191173357|ref|ZP_03034886.1| KamA family protein [Escherichia coli F11]
gi|218561306|ref|YP_002394219.1| lysine aminomutase [Escherichia coli S88]
gi|237703813|ref|ZP_04534294.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|300975204|ref|ZP_07172897.1| KamA family protein [Escherichia coli MS 200-1]
gi|331660724|ref|ZP_08361656.1| putative radical SAM domain protein [Escherichia coli TA206]
gi|91075270|gb|ABE10151.1| Hypothetical protein YjeK [Escherichia coli UTI89]
gi|110346097|gb|ABG72334.1| hypothetical protein YjeK (radical SAM superfamily) [Escherichia
coli 536]
gi|115515619|gb|ABJ03694.1| putative lysine aminomutase [Escherichia coli APEC O1]
gi|190906333|gb|EDV65943.1| KamA family protein [Escherichia coli F11]
gi|218368075|emb|CAR05882.1| putative lysine aminomutase [Escherichia coli S88]
gi|222035919|emb|CAP78664.1| Uncharacterized kamA family protein yjeK [Escherichia coli LF82]
gi|226901725|gb|EEH87984.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294490194|gb|ADE88950.1| KamA family protein [Escherichia coli IHE3034]
gi|300308759|gb|EFJ63279.1| KamA family protein [Escherichia coli MS 200-1]
gi|307629218|gb|ADN73522.1| putative lysine aminomutase [Escherichia coli UM146]
gi|312948798|gb|ADR29625.1| putative lysine aminomutase [Escherichia coli O83:H1 str. NRG 857C]
gi|315288493|gb|EFU47891.1| KamA family protein [Escherichia coli MS 110-3]
gi|315297615|gb|EFU56892.1| KamA family protein [Escherichia coli MS 16-3]
gi|323950784|gb|EGB46662.1| KamA family protein [Escherichia coli H252]
gi|323955577|gb|EGB51340.1| KamA family protein [Escherichia coli H263]
gi|324015063|gb|EGB84282.1| KamA family protein [Escherichia coli MS 60-1]
gi|331051766|gb|EGI23805.1| putative radical SAM domain protein [Escherichia coli TA206]
Length = 342
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NPNDP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|320193527|gb|EFW68164.1| Lysine 2,3-aminomutase [Escherichia coli WV_060327]
Length = 342
Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|309787707|ref|ZP_07682318.1| kamA family protein [Shigella dysenteriae 1617]
gi|308924457|gb|EFP69953.1| kamA family protein [Shigella dysenteriae 1617]
Length = 320
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 99/316 (31%), Positives = 167/316 (52%), Gaps = 4/316 (1%)
Query: 9 TSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 2 TDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEF 61
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ +
Sbjct: 62 AIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG--N 118
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PIV
Sbjct: 119 KRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIV 178
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G+
Sbjct: 179 IPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRGV 238
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG P
Sbjct: 239 NDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVP 298
Query: 308 FYILDLPGGYGKVKID 323
++ G K +D
Sbjct: 299 KLAREIGGEPSKTPLD 314
>gi|194434729|ref|ZP_03066981.1| KamA family protein [Shigella dysenteriae 1012]
gi|194417010|gb|EDX33127.1| KamA family protein [Shigella dysenteriae 1012]
gi|320180662|gb|EFW55589.1| Lysine 2,3-aminomutase [Shigella boydii ATCC 9905]
gi|332083146|gb|EGI88377.1| kamA family protein [Shigella boydii 5216-82]
Length = 342
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 168/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|238750049|ref|ZP_04611552.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC
43380]
gi|238711593|gb|EEQ03808.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC
43380]
Length = 335
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 99/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + + + + + + P NP+DP+ Q
Sbjct: 8 LQQLADVITDPDELLRILFLNEHPDLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 68 VLTAREEFITAPGFTNDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 126
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR
Sbjct: 127 QDNQG--NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDNELSWLLDELESIPHIKRLR 184
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI L Q L E+ V + H NH E ++ ++++L AG+ LL+
Sbjct: 185 IHTRLPVVIPARITAALCQRLSESRLQVLMVTHINHANEIDQDLRDSMAQLKRAGVTLLN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+NDD E+LA L + I PYY+H D G +HF + +E ++++ L
Sbjct: 245 QSVLLRGVNDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 304
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 305 RVSGYLVPRLAREIGGQPSKTPLD 328
>gi|258620467|ref|ZP_05715505.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258587346|gb|EEW12057.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 340
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 99/323 (30%), Positives = 160/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + P DP+ + N + + G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLGAEFEVHPGYSNDPLDEQN-NAIPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR
Sbjct: 136 DNKG--SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+N+ E L T + I PYYLH D G +HF ++ +E ++I+A L E+
Sbjct: 254 GVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQIMAGLIER 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLIPKLTREIGGKPSKTPLD 336
>gi|323189972|gb|EFZ75250.1| kamA family protein [Escherichia coli RN587/1]
gi|324008615|gb|EGB77834.1| KamA family protein [Escherichia coli MS 57-2]
Length = 342
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|153213997|ref|ZP_01949190.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124115567|gb|EAY34387.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 340
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 159/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E I P DP+ + N++ G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLSAEFEIHPGYSHDPLDEQNNTV-PGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVI +GGDPL+ L +++ + I H++ LR
Sbjct: 136 DNKG--SKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND + L T + I PYYLH D G +HF ++ ++ ++I+A L E+
Sbjct: 254 GVLLKGVNDTVDAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|262166674|ref|ZP_06034411.1| lysine 2,3-aminomutase [Vibrio mimicus VM223]
gi|262026390|gb|EEY45058.1| lysine 2,3-aminomutase [Vibrio mimicus VM223]
Length = 340
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 159/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + P DP+ + N + + G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLGAEFEVHPGYSNDPLDEQN-NAIPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR
Sbjct: 136 DNKG--SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+N+ E L T + I PYYLH D G +HF ++ E ++++A L E+
Sbjct: 254 GVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDAEARQLMAGLIER 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGKPSKTPLD 336
>gi|146279243|ref|YP_001169401.1| hypothetical protein Rsph17025_3212 [Rhodobacter sphaeroides ATCC
17025]
gi|145557484|gb|ABP72096.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17025]
Length = 340
Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats.
Identities = 150/346 (43%), Positives = 216/346 (62%), Gaps = 8/346 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L S DL L+ + + + E++ + I +T + + + +ARQF+P +
Sbjct: 3 RALDSLDDLATLGLVDPAE-ERLAEVARAFRIRVT----SQMAAAAADPAVARQFVPTVD 57
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I PEE DPIGD SP+ G+ HRY DR++L + C VYCRFCFRRE+VGS+ +
Sbjct: 58 ELEIRPEELADPIGDEARSPVPGLTHRYTDRVILHVTRTCDVYCRFCFRREVVGSEG--L 115
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS D AAL YI+ + EVI TGGDPL LS +RL+ +++ L I H+ +R HSRVP
Sbjct: 116 LSDADLTAALDYIEATPAVREVILTGGDPLTLSPRRLRGIIERLGQIAHLDQVRIHSRVP 175
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V PQR++ ++I+ L PV+I +H NH E +A AA+ RLA+ G+ LLSQSVLL+
Sbjct: 176 VVAPQRVDEDMIRALLG-PVPVWIVVHVNHAAELRLDARAALGRLADRGVPLLSQSVLLR 234
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND + L L R + LR+KPYYLHH DLA G HFR +I +G+ I+A L+ +I+G+
Sbjct: 235 GVNDSADTLEALFRALLRLRVKPYYLHHCDLARGAGHFRTSIAQGRAIMAELRRRITGIG 294
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + ++ G G + + D VH Y +
Sbjct: 295 LPTYVLDIPGGFGKVPVTPDHVIPDGPGRWQVRDPQGGVHRYEDPA 340
>gi|183179663|ref|ZP_02957874.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|183013074|gb|EDT88374.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 340
Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats.
Identities = 99/323 (30%), Positives = 161/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E I P DP+ + N++ G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLSAEFEIHPGYSHDPLDEQNNTV-PGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR
Sbjct: 136 DNKG--SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVKLFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E+
Sbjct: 254 GVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|262170406|ref|ZP_06038084.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451]
gi|261891482|gb|EEY37468.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451]
Length = 340
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 160/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + P DP+ + N + + G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLGAEFEVHPGYSNDPLDEQN-NAIPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR
Sbjct: 136 DNKG--SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+N+ E L T + I PYYLH D G +HF ++ +E ++++A L E+
Sbjct: 254 GVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQLMAGLIER 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGKPSKTPLD 336
>gi|153825103|ref|ZP_01977770.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149741249|gb|EDM55291.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 340
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 99/323 (30%), Positives = 161/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E I P DP+ + N++ G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLSAEFEIHPGYSHDPLDEQNNTV-PGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR
Sbjct: 136 DNKG--SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E+
Sbjct: 254 GVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|183598065|ref|ZP_02959558.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827]
gi|188022847|gb|EDU60887.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827]
Length = 342
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 97/326 (29%), Positives = 167/326 (51%), Gaps = 4/326 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q + +T+ +L + + + + + + + + + +P DP+ Q
Sbjct: 16 IQQLAEAITNPDELLQILGLESHQASKDGNDARKLFPLRVPRPFISRMKKGDPQDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ K E + P DP+ + N + + ++H+Y +R L+ + C V CR+CFRR
Sbjct: 76 VLTAKAEFDTYPGFSTDPLDEQN-NAIPSLLHKYHNRALMLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + A+ YI+ +++ E+IF+GGDPL+ L ++ L I H++ LR
Sbjct: 135 EDNKG--NKNNWLIAVDYIKNHTELNEIIFSGGDPLMAKDSELDWLIGQLEAIPHIKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P+RI L Q L + V + H NH E + AA+ +L NAG+ LL+
Sbjct: 193 IHSRLPVVIPERITTNLCQRLAHSRLQVIMVTHLNHANEIDDHFKAAMQKLKNAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+N+D + LANL + I PYYLH D G +HF ++ +E + ++ L
Sbjct: 253 QSVLLRGVNNDADTLANLSNALFDAGILPYYLHVLDKVQGAAHFLVSDQEARLLIQQLLG 312
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
K+SG P ++ G K +D +
Sbjct: 313 KVSGYLVPKLAREIGGEPSKTLLDLN 338
>gi|323138167|ref|ZP_08073240.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC
49242]
gi|322396629|gb|EFX99157.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC
49242]
Length = 363
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 170/326 (52%), Positives = 223/326 (68%), Gaps = 2/326 (0%)
Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81
+ ++ + + YS+A+TP +A LI+ +P DPIARQF+P EL LP+E DPIGD+
Sbjct: 36 PGRAQALRGVESQYSVAVTPDMAALIDAADPADPIARQFLPDARELVTLPQELADPIGDD 95
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
HSP G+VHRYPDR+LLKLL VCPVYCRFCFRRE VG KG VLS + T+AAL YI
Sbjct: 96 AHSPAPGLVHRYPDRVLLKLLTVCPVYCRFCFRRETVGRGKGDVLSPEATDAALDYIAGH 155
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
QI+EVI TGGDPL+LS +RL V + L I HV +LR H+R P P + E + L+
Sbjct: 156 RQIFEVILTGGDPLLLSGRRLSAVARRLAKIPHVAVLRVHTRAPTAAPDLVTQERLDALR 215
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E+GK +Y+A+H NH E + A AAI+RL AG LLSQ+VLLKG+NDD + L LMR
Sbjct: 216 ESGKALYVALHVNHSRELTPAARAAIARLHEAGATLLSQTVLLKGVNDDADTLERLMRDL 275
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
V LR+KPYYLHHPDLA GTSHFRL+++ G ++ + L +++G+ P Y+LD+PGG+GK
Sbjct: 276 VALRVKPYYLHHPDLAPGTSHFRLSLDAGLRVHSELTRRVTGVAVPRYVLDIPGGFGKAP 335
Query: 322 IDTHNIKKVGNGSYCITDHHNIVHDY 347
+ + + G G + I D VH Y
Sbjct: 336 V--SDAETDGEGGWRIADRSGRVHLY 359
>gi|323965534|gb|EGB60988.1| KamA family protein [Escherichia coli M863]
gi|327250088|gb|EGE61807.1| kamA family protein [Escherichia coli STEC_7v]
Length = 342
Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|254784867|ref|YP_003072295.1| KamA family protein [Teredinibacter turnerae T7901]
gi|237684557|gb|ACR11821.1| KamA family protein [Teredinibacter turnerae T7901]
Length = 335
Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 102/321 (31%), Positives = 168/321 (52%), Gaps = 3/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL ++ +T DL + + + + + + + + ++ + + P +PNDP+ Q +
Sbjct: 17 QLTNQ-ITKPADLLSRLSLDNQWLPAAERAAALFPLRVSEAFVSRMRPGDPNDPLLLQVL 75
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + P EDP+ + +P G++H+Y R+LL C + CR+CFRR
Sbjct: 76 PLGEEFAVTPGYSEDPLEEEKSNPAPGLIHKYHGRVLLIAAPHCAINCRYCFRRHF--DY 133
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +AALAYI+ + +I EVI +GGDPL+L K+L+ +L + I H+ +R H
Sbjct: 134 RQNTPSRTEWQAALAYIKTRPEIDEVILSGGDPLMLGDKQLRWLLTEIDAIPHITRIRIH 193
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R L++ L + + H NH E + A L AGI LL+Q+
Sbjct: 194 SRLPVVLPDRFTSTLLELLSATRAQMVVVAHCNHSQEIDQSVEAVFEALKQAGITLLNQT 253
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK IND IL L + + + PYYLH D +GT+H+ + + +++ L ++
Sbjct: 254 VLLKNINDSANILIELSKRLFQSGVLPYYLHLLDRVSGTAHYEVDELDARRLREELLAQL 313
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P + + PG K I
Sbjct: 314 PGYLVPTLVKEEPGAPSKTPI 334
>gi|218551416|ref|YP_002385208.1| lysine aminomutase [Escherichia fergusonii ATCC 35469]
gi|218358958|emb|CAQ91618.1| putative lysine aminomutase [Escherichia fergusonii ATCC 35469]
gi|324112256|gb|EGC06234.1| KamA family protein [Escherichia fergusonii B253]
gi|325499684|gb|EGC97543.1| lysine aminomutase [Escherichia fergusonii ECD227]
Length = 342
Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|323975512|gb|EGB70613.1| KamA family protein [Escherichia coli TW10509]
Length = 342
Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|215489493|ref|YP_002331924.1| predicted lysine aminomutase [Escherichia coli O127:H6 str.
E2348/69]
gi|312965822|ref|ZP_07780048.1| kamA family protein [Escherichia coli 2362-75]
gi|215267565|emb|CAS12020.1| predicted lysine aminomutase [Escherichia coli O127:H6 str.
E2348/69]
gi|312289065|gb|EFR16959.1| kamA family protein [Escherichia coli 2362-75]
Length = 342
Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLTGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|194437302|ref|ZP_03069400.1| KamA family protein [Escherichia coli 101-1]
gi|253775226|ref|YP_003038057.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254164078|ref|YP_003047186.1| putative lysine aminomutase [Escherichia coli B str. REL606]
gi|297521176|ref|ZP_06939562.1| predicted lysine aminomutase [Escherichia coli OP50]
gi|300929255|ref|ZP_07144732.1| KamA family protein [Escherichia coli MS 187-1]
gi|194423858|gb|EDX39847.1| KamA family protein [Escherichia coli 101-1]
gi|242379672|emb|CAQ34495.1| lysine 2,3-aminomutase [Escherichia coli BL21(DE3)]
gi|253326270|gb|ACT30872.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975979|gb|ACT41650.1| predicted lysine aminomutase [Escherichia coli B str. REL606]
gi|253980135|gb|ACT45805.1| predicted lysine aminomutase [Escherichia coli BL21(DE3)]
gi|300462790|gb|EFK26283.1| KamA family protein [Escherichia coli MS 187-1]
gi|323960335|gb|EGB55974.1| KamA family protein [Escherichia coli H489]
gi|323970596|gb|EGB65855.1| KamA family protein [Escherichia coli TA007]
Length = 342
Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ L++ + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|332346225|gb|AEE59559.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 342
Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ L++ + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDNVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|218692484|ref|YP_002400696.1| putative lysine aminomutase [Escherichia coli ED1a]
gi|218430048|emb|CAR11037.2| putative lysine aminomutase [Escherichia coli ED1a]
Length = 342
Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NPNDP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRMPRSFIDRMEKGNPNDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|238764091|ref|ZP_04625046.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii
ATCC 33638]
gi|238697762|gb|EEP90524.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii
ATCC 33638]
Length = 335
Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 166/324 (51%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L L+ + + + + + + + + P NP+DP+ Q
Sbjct: 8 LQQLADVITDPDELLRILLLNEHPNLQQGTAARRLFPLRVPRAFVSRMQPGNPSDPLLLQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P +DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 68 VLTAREEFIAAPGFTDDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 126
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL Y+++ ++ E+IF+GGDPL+ L +L + I H++ LR
Sbjct: 127 QDNQG--NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWLLDEIESISHIKRLR 184
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI EL Q L + V + H NH E ++++L AG+ LL+
Sbjct: 185 IHTRLPVVIPARITTELCQRLSNSRLQVVMVTHINHANEIDASFRDSMAQLKQAGVTLLN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+N+D E+LA L + I PYY+H D G +HF + +E ++++ L
Sbjct: 245 QSVLLRGVNNDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLR 304
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 305 RVSGYLVPRLTREVGGQPSKTPLD 328
>gi|16131971|ref|NP_418570.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia
coli str. K-12 substr. MG1655]
gi|89110867|ref|AP_004647.1| predicted lysine aminomutase [Escherichia coli str. K-12 substr.
W3110]
gi|238903254|ref|YP_002929050.1| putative lysine aminomutase [Escherichia coli BW2952]
gi|256025082|ref|ZP_05438947.1| putative lysine aminomutase [Escherichia sp. 4_1_40B]
gi|301027965|ref|ZP_07191250.1| KamA family protein [Escherichia coli MS 196-1]
gi|732002|sp|P39280|YJEK_ECOLI RecName: Full=Uncharacterized KamA family protein YjeK
gi|536990|gb|AAA97045.1| ORF_f342 [Escherichia coli str. K-12 substr. MG1655]
gi|1790589|gb|AAC77106.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia
coli str. K-12 substr. MG1655]
gi|85676898|dbj|BAE78148.1| predicted lysine aminomutase [Escherichia coli str. K12 substr.
W3110]
gi|238862637|gb|ACR64635.1| predicted lysine aminomutase [Escherichia coli BW2952]
gi|260451026|gb|ACX41448.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli DH1]
gi|299878944|gb|EFI87155.1| KamA family protein [Escherichia coli MS 196-1]
gi|315138701|dbj|BAJ45860.1| putative lysine aminomutase [Escherichia coli DH1]
gi|323380464|gb|ADX52732.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli KO11]
gi|323940066|gb|EGB36260.1| KamA family protein [Escherichia coli E482]
Length = 342
Score = 342 bits (878), Expect = 5e-92, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E+ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDAEEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++C + + + H NH E E A+++L G+ LL+QSVLL+
Sbjct: 200 VIPARITEALVECFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|283786829|ref|YP_003366694.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
gi|282950283|emb|CBG89930.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
Length = 342
Score = 342 bits (878), Expect = 5e-92, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + E + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLQLDTDENLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSQQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIAAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYTENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ +AAL YI ++ E+IF+GGDPL+ L+ +L L I HV+ LR HSR+P+
Sbjct: 140 NKRNWQAALDYINAHPELDEIIFSGGDPLMAKDHELEWLLTRLEDIGHVKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL + + + H NH E + A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITGELAARFARSSLQILLVNHINHANEIDGDFREAMAKLRAAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LA+L + + PYYLH D G +HF +T +E ++I+ L ISG
Sbjct: 260 VNDNARTLADLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLISGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K ID
Sbjct: 320 PKLAREIGGEPSKTPID 336
>gi|332140129|ref|YP_004425867.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550151|gb|AEA96869.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
str. 'Deep ecotype']
Length = 341
Score = 342 bits (878), Expect = 5e-92, Method: Composition-based stats.
Identities = 106/317 (33%), Positives = 163/317 (51%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ T L + +E+ + + + + + A+L+ NPNDP+ Q +P +E
Sbjct: 23 SFTDPAKLLQHLGLDEEKYAQHIKARRLFPMRVPRHFADLMEKGNPNDPLFLQVMPLSDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P EDP+ + + + KGI+H+Y R+LL + C V CR+CFRR + +
Sbjct: 83 FLTSPGYSEDPL-EEHDTAGKGILHKYDSRVLLMVRTGCAVNCRYCFRRHFPYADN--AV 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S E L YIQ I EVIF+GGDPL+ L + + I HV+ LR H+R+P+
Sbjct: 140 SKHQWEEVLQYIQAHDNINEVIFSGGDPLMAKDDHLAWLANEIASINHVKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RIN + + +HANH E SE + + L G+ LL+QSVLLKG
Sbjct: 200 VLPERINNAFVNWFTALPIQKVLVLHANHANEMSEALKSRLITLREKGVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E +++L E + PYYLH D G SHF ++ +EG+ I+ +++ G
Sbjct: 260 VNDSGEAISDLSEALFEASVLPYYLHVLDKVQGASHFYVSDDEGRHIMEEAIKRLPGFLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P + ++ G GK ID
Sbjct: 320 PKLVREIGGQPGKTPID 336
>gi|153829470|ref|ZP_01982137.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148875053|gb|EDL73188.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 340
Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 161/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E I P DP+ + N++ G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLSAEFEIHPGYSHDPLDEQNNTV-PGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR
Sbjct: 136 DNKG--SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E+
Sbjct: 254 GVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|307544317|ref|YP_003896796.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581]
gi|307216341|emb|CBV41611.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581]
Length = 572
Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats.
Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 2/316 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ ++L ++K + + + + I P +P+DP+ RQ +P EE
Sbjct: 259 AIRDPRELCRRLGLEKRWWPGAETGHALFEVRVPEAYLARIRPGDPHDPLLRQVLPLDEE 318
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + H+P +G++H+Y R+LL C + CR+CFRR +
Sbjct: 319 SHSTPGFVTDPLEEREHTPRRGLIHKYAGRVLLIASPACAINCRYCFRRHFPYDEN--AP 376
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S L Y++ + I E I +GGDPL + ++L +++ L I H++ LR H+R+P+
Sbjct: 377 SRAQWADTLDYLRGDASIREAILSGGDPLAANDRQLGWLVEQLEAIPHLKRLRIHTRLPV 436
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI+ L+ L + +H NHP E E I A RL +AG+ LL+QSVLL G
Sbjct: 437 VIPDRIDGALLDWLGRTRLQKVVVLHINHPNEIDEAVIDACRRLRDAGVTLLNQSVLLAG 496
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD + L L E + PYYLH D G +HF + + + +V +++ ++ G
Sbjct: 497 INDDVDTLTALSERLFEADVLPYYLHVLDPVDGAAHFEIDDDTARTLVDAMRRELPGFLM 556
Query: 307 PFYILDLPGGYGKVKI 322
P + ++PG K I
Sbjct: 557 PTLVREIPGEASKTPI 572
>gi|229524637|ref|ZP_04414042.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426]
gi|229338218|gb|EEO03235.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426]
Length = 340
Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 161/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E I P DP+ + N++ G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLSAEFEIHPGYSHDPLDEQNNTV-PGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR
Sbjct: 136 DNKG--SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E+
Sbjct: 254 GVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|332304891|ref|YP_004432742.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172220|gb|AEE21474.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 341
Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 161/319 (50%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T L + + + + + + A + NP+DP+ RQ P K+E
Sbjct: 23 AFTDPLALLKYLALDPAKFTDDIAARRLFPMRVPAPFAKRMEKGNPDDPLFRQVFPSKKE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
N P DP+ + ++S G++H+Y R+LL + C V CR+CFRR S L
Sbjct: 83 FNSDPNYLLDPLQEQSNSK-PGVLHKYQSRVLLLVRGGCAVNCRYCFRRHFPYSDN--HL 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + L YI++ S+I EVI++GGDPL+ L + + + I H++ +R H+R+P+
Sbjct: 140 NKQEWQETLDYIRQDSKINEVIYSGGDPLMAKDDFLAWLTEEIAQIDHIKRIRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI PELI+ + + +H NHP E + + +L AG+ LL+Q VLLK
Sbjct: 200 VIPSRITPELIKWFTQTRLKPIMVLHINHPQEIDQSLRDTLQKLTQAGVTLLNQGVLLKD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND + L + + + PYYLH D G HF + + I+A + +++ G
Sbjct: 260 INDSADAQVALSESLFDAGVLPYYLHVMDKVQGAQHFDHEDKIAKDIMAQMIKRLPGFLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P + ++ G GK ID +
Sbjct: 320 PKLVREIGGQPGKTPIDLN 338
>gi|227326240|ref|ZP_03830264.1| hypothetical protein PcarcW_02548 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 335
Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats.
Identities = 104/337 (30%), Positives = 169/337 (50%), Gaps = 4/337 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
MQ +T +L + ++ + + +++ + A + NP+DP+ Q
Sbjct: 1 MQQLADVITDPDELLQLLALNDHAKLRQGSDARRLFALRVPRAFAARMQKGNPDDPLLLQ 60
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 61 VLTAREEFIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 119
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ S++ E+IF+GGDPL+ L ++ L +I H++ LR
Sbjct: 120 QDNQG--NKANWRQALDYIRQHSELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLR 177
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L L + V + H NHP E + +++RL AG+ LL+
Sbjct: 178 IHSRLPVVIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLN 237
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND+ E LA L + I PYYLH D G +HF + E + +V +L +
Sbjct: 238 QSVLLRGVNDNAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALLK 297
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
K+SG P ++ G K +D + +
Sbjct: 298 KVSGYLVPRLAREIGGEASKTPLDLGMKQHQDDAGIV 334
>gi|229513581|ref|ZP_04403045.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21]
gi|254285853|ref|ZP_04960815.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|297581499|ref|ZP_06943422.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|150424035|gb|EDN15974.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|229349458|gb|EEO14414.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21]
gi|297534337|gb|EFH73175.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 340
Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 161/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E I P DP+ + N++ G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLSAEFEIHPGYSHDPLDEQNNTV-PGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR
Sbjct: 136 DNKG--SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E+
Sbjct: 254 GVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|227113817|ref|ZP_03827473.1| hypothetical protein PcarbP_12668 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 335
Score = 341 bits (876), Expect = 8e-92, Method: Composition-based stats.
Identities = 104/339 (30%), Positives = 172/339 (50%), Gaps = 5/339 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
MQ +T +L + ++ + + +++ + A + NP+DP+ Q
Sbjct: 1 MQQLADVITDPDELLQLLALNDHAKLRQGSDARRLFALRVPRAFAARMQKGNPDDPLLLQ 60
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 61 VLTAREEFIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 119
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR
Sbjct: 120 QDNQG--NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLR 177
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L L + V + H NHP E + +++RL AG+ LL+
Sbjct: 178 IHSRLPVVIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLN 237
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND+ E LA L + I PYYLH D G +HF + E + +V +L +
Sbjct: 238 QSVLLRGVNDNAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARILVKALLK 297
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
K+SG P ++ G K +D +K+ + + +
Sbjct: 298 KVSGYLVPRLAREIGGEASKTPLDL-GMKQHQDDAGLLR 335
>gi|183221183|ref|YP_001839179.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911274|ref|YP_001962829.1| lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167775950|gb|ABZ94251.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779605|gb|ABZ97903.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 402
Score = 341 bits (876), Expect = 8e-92, Method: Composition-based stats.
Identities = 115/327 (35%), Positives = 181/327 (55%), Gaps = 7/327 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ +DL ++ + I+ ++ TP +L +P +PN PI R +
Sbjct: 29 QLQNRV--KGEDLARYFVLSDSERVGIQNTIRLL-VSTTPYYLSLSDPSDPNCPIRRMIV 85
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P KEE EE DP+ + SP++G+ H YP+R+LL H C VYCR C R V S
Sbjct: 86 PTKEEAIFSLEESADPLEEERLSPVRGLTHMYPNRVLLFSNHSCSVYCRHCMRGRKV-SS 144
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ D E+A YI+ +I +V+ +GGDPL L+ R++ +LK L I HV+I R
Sbjct: 145 NEERMEKSDLESAFDYIRNHPEIEDVVVSGGDPLNLADLRIEWILKELNQIPHVKICRLG 204
Query: 182 SRVPIVDPQRINPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+R P+ P RI + Q +++ ++ NHP E ++E AI +L G+ +
Sbjct: 205 TRNPVTLPFRITDAICQIIEKYNDDNLSIFCNTQFNHPKECTKETKEAILKLLKVGVSVG 264
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKGINDD E + L + +E+R++ YYL+ P+L G+ FR + G +IV ++
Sbjct: 265 NQAVLLKGINDDEETMLTLHKKLLEMRVRAYYLYDPELIPGSRGFRTPLARGIEIVEYMR 324
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTH 325
KI G+ P ++ DLPGG GK+ I +
Sbjct: 325 GKIGGMGIPQFVNDLPGGGGKITIGAN 351
>gi|327485135|gb|AEA79542.1| Lysine 2,3-aminomutase [Vibrio cholerae LMA3894-4]
Length = 340
Score = 341 bits (876), Expect = 8e-92, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 161/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E I P DP+ + N++ G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLSAEFVIHPGYSHDPLDEQNNTV-PGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR
Sbjct: 136 DNKG--SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E+
Sbjct: 254 GVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|15804738|ref|NP_290779.1| hypothetical protein Z5751 [Escherichia coli O157:H7 EDL933]
gi|12519128|gb|AAG59345.1|AE005648_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 342
Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDP + L +L L I H++ R HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPXMAKDHELDWLLTQLEAIPHIKRXRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|261823176|ref|YP_003261282.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae
WPP163]
gi|261607189|gb|ACX89675.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae
WPP163]
Length = 348
Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + ++ + + +++ + A + +P+DP+ Q
Sbjct: 16 LQQLADVITDPDELLQLLALNDHAKLRQGTDARRLFALRVPRAFAARMQKGDPDDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTAREEFIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR
Sbjct: 135 QDNQG--NKANWRQALDYIRQHPELNEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L L + V + H NHP E + +++RL AG+ LL+
Sbjct: 193 IHSRLPVVIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND E LA L + I PYYLH D G +HF + E + +V +L +
Sbjct: 253 QSVLLRGVNDSAETLAQLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALMK 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
K+SG P ++ G K +D
Sbjct: 313 KVSGYLVPRLAREIGGEASKTPLD 336
>gi|221369244|ref|YP_002520340.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131]
gi|221162296|gb|ACM03267.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131]
Length = 345
Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats.
Identities = 159/350 (45%), Positives = 220/350 (62%), Gaps = 10/350 (2%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFI 61
L + L S +DL +A L + + ++E++ + I LTP + +DP +ARQF+
Sbjct: 5 LMDRALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFV 58
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+
Sbjct: 59 PTLDELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSE 118
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R H
Sbjct: 119 G--ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIH 176
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQS
Sbjct: 177 SRVPVVAPHRIDDNMLRALLG-PIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQS 235
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND E L +L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I
Sbjct: 236 VLLRGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRI 295
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G+ P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 296 TGIGLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPYADPD 345
>gi|330991009|ref|ZP_08314963.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1]
gi|329761830|gb|EGG78320.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1]
Length = 359
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 147/342 (42%), Positives = 216/342 (63%), Gaps = 4/342 (1%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+TL S DL A L+ Q+ +++++ HY+ A+ P A+LI P+DPI RQ IP
Sbjct: 16 SRTLRSVTDLLAAGLVTPAQVPALEDVARHYATAIPPAFADLIET--PDDPIGRQVIPDG 73
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E++ E DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G+
Sbjct: 74 AEIHTDTTEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGP-GGS 132
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
VL E AL +++ + I EV+ TGGDPL+LS +R++ +++ L + H+ +R HSRV
Sbjct: 133 VLDDAALEHALDWLRTHTGIHEVVMTGGDPLMLSARRMRAIMQALEGMDHIHTIRIHSRV 192
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+ DP R++ E+ L+ +++ +H NH E + +A AAI R+ I +L QSVLL
Sbjct: 193 PVADPGRLDDEMADALETTRS-MWLVVHVNHARELTPQARAAIRRVQARAIPVLGQSVLL 251
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND P+ L L+R V RI+PYYLH D A GT+ F + I EGQ+++ASL+ +++G+
Sbjct: 252 RGVNDTPQALEALLRAQVAARIRPYYLHQLDPAPGTARFHVPIREGQRLLASLRGRVTGI 311
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
P Y+LD+PGG+GKV I + + +G+ T +H
Sbjct: 312 AWPTYVLDIPGGHGKVPIAPGYLHEGPDGTLHATAPDGTIHR 353
>gi|157156524|ref|YP_001465646.1| KamA family protein [Escherichia coli E24377A]
gi|157163612|ref|YP_001460930.1| KamA family protein [Escherichia coli HS]
gi|191165672|ref|ZP_03027512.1| KamA family protein [Escherichia coli B7A]
gi|193065734|ref|ZP_03046798.1| KamA family protein [Escherichia coli E22]
gi|194428975|ref|ZP_03061508.1| KamA family protein [Escherichia coli B171]
gi|209921637|ref|YP_002295721.1| hypothetical protein ECSE_4446 [Escherichia coli SE11]
gi|218556701|ref|YP_002389615.1| putative lysine aminomutase [Escherichia coli IAI1]
gi|218697896|ref|YP_002405563.1| putative lysine aminomutase [Escherichia coli 55989]
gi|256019792|ref|ZP_05433657.1| putative lysine aminomutase [Shigella sp. D9]
gi|260846979|ref|YP_003224757.1| putative lysine aminomutase [Escherichia coli O103:H2 str. 12009]
gi|260858300|ref|YP_003232191.1| putative lysine aminomutase [Escherichia coli O26:H11 str. 11368]
gi|260870945|ref|YP_003237347.1| putative lysine aminomutase [Escherichia coli O111:H- str. 11128]
gi|293476459|ref|ZP_06664867.1| kamA family protein yjeK [Escherichia coli B088]
gi|300816554|ref|ZP_07096775.1| KamA family protein [Escherichia coli MS 107-1]
gi|300821239|ref|ZP_07101387.1| KamA family protein [Escherichia coli MS 119-7]
gi|300905975|ref|ZP_07123700.1| KamA family protein [Escherichia coli MS 84-1]
gi|300922447|ref|ZP_07138566.1| KamA family protein [Escherichia coli MS 182-1]
gi|301302564|ref|ZP_07208694.1| KamA family protein [Escherichia coli MS 124-1]
gi|301325908|ref|ZP_07219331.1| KamA family protein [Escherichia coli MS 78-1]
gi|307312017|ref|ZP_07591654.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W]
gi|309796959|ref|ZP_07691359.1| KamA family protein [Escherichia coli MS 145-7]
gi|331671054|ref|ZP_08371887.1| putative radical SAM domain protein [Escherichia coli TA271]
gi|331680279|ref|ZP_08380938.1| putative radical SAM domain protein [Escherichia coli H591]
gi|332280930|ref|ZP_08393343.1| KamA family protein [Shigella sp. D9]
gi|157069292|gb|ABV08547.1| KamA family protein [Escherichia coli HS]
gi|157078554|gb|ABV18262.1| KamA family protein [Escherichia coli E24377A]
gi|190904367|gb|EDV64076.1| KamA family protein [Escherichia coli B7A]
gi|192926603|gb|EDV81233.1| KamA family protein [Escherichia coli E22]
gi|194413028|gb|EDX29317.1| KamA family protein [Escherichia coli B171]
gi|209914896|dbj|BAG79970.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218354628|emb|CAV01600.1| putative lysine aminomutase [Escherichia coli 55989]
gi|218363470|emb|CAR01124.1| putative lysine aminomutase [Escherichia coli IAI1]
gi|257756949|dbj|BAI28451.1| predicted lysine aminomutase [Escherichia coli O26:H11 str. 11368]
gi|257762126|dbj|BAI33623.1| predicted lysine aminomutase [Escherichia coli O103:H2 str. 12009]
gi|257767301|dbj|BAI38796.1| predicted lysine aminomutase [Escherichia coli O111:H- str. 11128]
gi|291320912|gb|EFE60354.1| kamA family protein yjeK [Escherichia coli B088]
gi|300402209|gb|EFJ85747.1| KamA family protein [Escherichia coli MS 84-1]
gi|300421205|gb|EFK04516.1| KamA family protein [Escherichia coli MS 182-1]
gi|300526128|gb|EFK47197.1| KamA family protein [Escherichia coli MS 119-7]
gi|300530784|gb|EFK51846.1| KamA family protein [Escherichia coli MS 107-1]
gi|300842089|gb|EFK69849.1| KamA family protein [Escherichia coli MS 124-1]
gi|300847324|gb|EFK75084.1| KamA family protein [Escherichia coli MS 78-1]
gi|306907824|gb|EFN38325.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W]
gi|308119372|gb|EFO56634.1| KamA family protein [Escherichia coli MS 145-7]
gi|315063463|gb|ADT77790.1| predicted lysine aminomutase [Escherichia coli W]
gi|315255490|gb|EFU35458.1| KamA family protein [Escherichia coli MS 85-1]
gi|320200721|gb|EFW75307.1| Lysine 2,3-aminomutase [Escherichia coli EC4100B]
gi|323156036|gb|EFZ42198.1| kamA family protein [Escherichia coli EPECa14]
gi|323171580|gb|EFZ57226.1| kamA family protein [Escherichia coli LT-68]
gi|323182253|gb|EFZ67663.1| kamA family protein [Escherichia coli 1357]
gi|323946085|gb|EGB42121.1| KamA family protein [Escherichia coli H120]
gi|324019385|gb|EGB88604.1| KamA family protein [Escherichia coli MS 117-3]
gi|324118714|gb|EGC12606.1| KamA family protein [Escherichia coli E1167]
gi|331061643|gb|EGI33569.1| putative radical SAM domain protein [Escherichia coli TA271]
gi|331071742|gb|EGI43078.1| putative radical SAM domain protein [Escherichia coli H591]
gi|332103282|gb|EGJ06628.1| KamA family protein [Shigella sp. D9]
gi|333010296|gb|EGK29729.1| kamA family protein [Shigella flexneri VA-6]
Length = 342
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|170679776|ref|YP_001746542.1| KamA family protein [Escherichia coli SMS-3-5]
gi|170517494|gb|ACB15672.1| KamA family protein [Escherichia coli SMS-3-5]
Length = 342
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NPNDP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQIALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|15642656|ref|NP_232289.1| hypothetical protein VC2661 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590925|ref|ZP_01678247.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121727598|ref|ZP_01680706.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147674649|ref|YP_001218151.1| hypothetical protein VC0395_A2235 [Vibrio cholerae O395]
gi|153819801|ref|ZP_01972468.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821563|ref|ZP_01974230.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227082777|ref|YP_002811328.1| hypothetical protein VCM66_2581 [Vibrio cholerae M66-2]
gi|229507290|ref|ZP_04396795.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286]
gi|229509786|ref|ZP_04399267.1| lysine 2,3-aminomutase [Vibrio cholerae B33]
gi|229516911|ref|ZP_04406357.1| lysine 2,3-aminomutase [Vibrio cholerae RC9]
gi|229606796|ref|YP_002877444.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236]
gi|254225400|ref|ZP_04919011.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254851197|ref|ZP_05240547.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255744377|ref|ZP_05418329.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101]
gi|262158513|ref|ZP_06029628.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1]
gi|262170093|ref|ZP_06037782.1| lysine 2,3-aminomutase [Vibrio cholerae RC27]
gi|298500520|ref|ZP_07010324.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9657254|gb|AAF95802.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547247|gb|EAX57371.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630089|gb|EAX62494.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|125622034|gb|EAZ50357.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126509662|gb|EAZ72256.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126520948|gb|EAZ78171.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146316532|gb|ABQ21071.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227010665|gb|ACP06877.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227014549|gb|ACP10759.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229345974|gb|EEO10946.1| lysine 2,3-aminomutase [Vibrio cholerae RC9]
gi|229353260|gb|EEO18199.1| lysine 2,3-aminomutase [Vibrio cholerae B33]
gi|229354795|gb|EEO19716.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286]
gi|229369451|gb|ACQ59874.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236]
gi|254846902|gb|EET25316.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255737902|gb|EET93295.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101]
gi|262021501|gb|EEY40213.1| lysine 2,3-aminomutase [Vibrio cholerae RC27]
gi|262029674|gb|EEY48323.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1]
gi|297540689|gb|EFH76746.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 340
Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 160/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E I P DP+ + N++ G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLSAEFEIHPGYSHDPLDEQNNTV-PGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR
Sbjct: 136 DNKG--GKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E+
Sbjct: 254 GVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|333012676|gb|EGK32056.1| kamA family protein [Shigella flexneri K-227]
Length = 342
Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGKPSKTPLD 336
>gi|114327751|ref|YP_744908.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1]
gi|114315925|gb|ABI61985.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1]
Length = 362
Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 150/341 (43%), Positives = 209/341 (61%), Gaps = 10/341 (2%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
++L S DL A LI E ++ ++ Y+IA+ P + LI + +DPI Q IP
Sbjct: 24 PRSLRSLADLRRAGLIDDE--APLQAVAAQYAIAIPPAMQALI--TDRHDPIGLQVIPDP 79
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E+ P E DPIGD+ SP+ GIVHRYPDR LLK L +CPVYCRFCFRRE VG G
Sbjct: 80 AEMITAPYENVDPIGDDALSPVPGIVHRYPDRALLKPLLICPVYCRFCFRREHVGPDGG- 138
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
VLS + AL ++ QI EVI TGGDPL+LS +RL ++ L I H+ I+R HSRV
Sbjct: 139 VLSEEQLRIALDWLAGHPQIREVILTGGDPLMLSPRRLSFIINELNNIPHIDIIRIHSRV 198
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+ DP + ++ L E K +++ +H N+ E ++ A +I GI +LSQ+VLL
Sbjct: 199 PVADPALVTQAMLDAL-ETDKAMFLVLHTNNVKELTDLAALSIQSFQRRGIPVLSQTVLL 257
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND E L L R + LR+KPYYLH D A GT+ FR+ +EEG+ I+ +L+ +ISGL
Sbjct: 258 RGVNDSAEALEALYRRILRLRVKPYYLHQLDAAPGTARFRVPVEEGRAILHALRGRISGL 317
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
P Y++D+PGGYGKV +D ++ G+ + D + H
Sbjct: 318 AWPTYVIDIPGGYGKVPVDPDYLESDGS----VRDINGHRH 354
>gi|193067826|ref|ZP_03048792.1| KamA family protein [Escherichia coli E110019]
gi|192958801|gb|EDV89238.1| KamA family protein [Escherichia coli E110019]
Length = 342
Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|74314635|ref|YP_313054.1| hypothetical protein SSON_4330 [Shigella sonnei Ss046]
gi|73858112|gb|AAZ90819.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 342
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DPI RQ + ++E
Sbjct: 23 VTDPGELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPILRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|332560846|ref|ZP_08415164.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N]
gi|332274644|gb|EGJ19960.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N]
Length = 340
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 158/347 (45%), Positives = 219/347 (63%), Gaps = 10/347 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
+ L S +DL +A L + + ++E++ + I LTP + +DP +ARQF+P
Sbjct: 3 RALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+
Sbjct: 57 DELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV
Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL
Sbjct: 175 PVVAPHRIDDNMLRALLG-PIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND E L +L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+
Sbjct: 234 RGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRITGI 293
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 294 GLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPYADPD 340
>gi|189500360|ref|YP_001959830.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
gi|189495801|gb|ACE04349.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
Length = 358
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 119/355 (33%), Positives = 186/355 (52%), Gaps = 14/355 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+++ + S Q L + E+ I+ + +TP A+L++ +PN PI RQ I
Sbjct: 8 QMQN-LVDSVQKLEQYINVTDEERRTIESLDTK--WGVTPYFASLMDKDDPNCPIRRQVI 64
Query: 62 PQKEELNILPEEREDPIGDNNHSPLK----GIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
P +E + N S + I +Y DRI ++ C +YCR CFR+E+
Sbjct: 65 PSMQEKVNEFGMDNYLLWKENRSTEEVRPDSIARQYHDRIAFTVIETCAIYCRHCFRKEL 124
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V Q + D + LA+I E +I +V+ TGGDPL+LS +L +++ LR I HV++
Sbjct: 125 VVDQDLKL--RMDVDEGLAWIAEHPEIRDVLITGGDPLLLSDDKLARLIGRLREIPHVEM 182
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGII 236
+R SR+PIV PQRI L + + K PV+I NHP E +EE A+ L + GI
Sbjct: 183 IRIGSRLPIVLPQRITEGLKKAIGGFHKVPVWINTQCNHPKEITEETAKAVYELMSCGIN 242
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA- 295
+ +Q+VLLKGINDD E L + + +RI+PYY+ + + A G HFR +E+G +++
Sbjct: 243 VGNQAVLLKGINDDVETFRELHQMLLRIRIRPYYVFYCEPAPGIDHFRTPVEKGAELIRD 302
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTH-NIKKVGNGSYCITDHHNIVHDYPP 349
+L+ +GL QP Y+ L GKV + + + Y + +H P
Sbjct: 303 ALRGHTTGLAQPMYV--LATNIGKVPLMPDYYMIDKNDKEYELRNHTGKTTKIPN 355
>gi|126464702|ref|YP_001045815.1| lysine 2,3-aminomutase YodO family protein [Rhodobacter sphaeroides
ATCC 17029]
gi|126106513|gb|ABN79043.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17029]
Length = 345
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 156/350 (44%), Positives = 219/350 (62%), Gaps = 10/350 (2%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFI 61
L + + S +DL +A L + + ++E++ + I LTP + +DP +ARQF+
Sbjct: 5 LMDRAVESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFV 58
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VG++
Sbjct: 59 PTLDELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGNE 118
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R H
Sbjct: 119 G--ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIH 176
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQS
Sbjct: 177 SRVPVVAPHRIDDNMLRALLG-PIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQS 235
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + L L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I
Sbjct: 236 VLLRGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMADLRRRI 295
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G+ P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 296 TGIGLPSYVLDLPGGFGKVPLTHDHLIADGPGRWQVRDPQGGLHPYADPD 345
>gi|323176095|gb|EFZ61687.1| kamA family protein [Escherichia coli 1180]
gi|333011130|gb|EGK30544.1| kamA family protein [Shigella flexneri K-272]
Length = 320
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 96/316 (30%), Positives = 165/316 (52%), Gaps = 4/316 (1%)
Query: 9 TSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 2 TDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEF 61
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ +
Sbjct: 62 VVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG--N 118
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PIV
Sbjct: 119 KRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIV 178
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G+
Sbjct: 179 IPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRGV 238
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG P
Sbjct: 239 NDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVP 298
Query: 308 FYILDLPGGYGKVKID 323
++ G K +D
Sbjct: 299 KLAREIGGEPSKTPLD 314
>gi|261211227|ref|ZP_05925516.1| lysine 2,3-aminomutase [Vibrio sp. RC341]
gi|260839728|gb|EEX66339.1| lysine 2,3-aminomutase [Vibrio sp. RC341]
Length = 340
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 159/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + P DP+ + N + + G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLNAEFEVHPGYSNDPLDEQN-NAIPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR
Sbjct: 136 DNKG--SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + + + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND L T + I PYYLH D G +HF ++ ++ ++I+A L E+
Sbjct: 254 GVLLKGVNDTVAAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|239994935|ref|ZP_04715459.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
ATCC 27126]
Length = 341
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 168/317 (52%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ T L + +E+ + + + + + +L+ NPNDP+ Q +P +E
Sbjct: 23 SFTDPAKLLQHLGLDQEKYAQHIKARRLFPMRVPRHFVDLMEKENPNDPLFLQVMPLSDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P EDP+ D + + KGI+H+Y R+LL + C V CR+CFRR + +
Sbjct: 83 FLTSPGYSEDPL-DEHDTAGKGILHKYDSRVLLMVRTGCAVNCRYCFRRHFPYADN--AV 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S L Y++ ++I EVIF+GGDPL+ + L + + I H++ LR HSR+P+
Sbjct: 140 SKHQWLDVLEYLRSNNKINEVIFSGGDPLMAKDEHLSWLANEITTIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RI+ + ++ + +HANH E SE + + L G+ LL+QSVLLKG
Sbjct: 200 VLPERISHDFVEWFTALPLQKVLVLHANHANEMSETLKSRLKTLRERGVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + +++L T E + PYYLH D G SHF ++ +EG++I+ +++ G
Sbjct: 260 VNDSGDAISDLSETLFEAGVLPYYLHVLDKVQGASHFYVSDDEGREIMEEAIKRLPGFLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P + ++ G GK ID
Sbjct: 320 PKLVREIGGQPGKTPID 336
>gi|170021843|ref|YP_001726797.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC
8739]
gi|169756771|gb|ACA79470.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC
8739]
Length = 342
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 165/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPEDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|188496002|ref|ZP_03003272.1| KamA family protein [Escherichia coli 53638]
gi|254037160|ref|ZP_04871237.1| KamA family protein [Escherichia sp. 1_1_43]
gi|300949103|ref|ZP_07163147.1| KamA family protein [Escherichia coli MS 116-1]
gi|300957803|ref|ZP_07169983.1| KamA family protein [Escherichia coli MS 175-1]
gi|301646590|ref|ZP_07246457.1| KamA family protein [Escherichia coli MS 146-1]
gi|307140841|ref|ZP_07500197.1| hypothetical protein EcolH7_22227 [Escherichia coli H736]
gi|312974047|ref|ZP_07788218.1| kamA family protein [Escherichia coli 1827-70]
gi|331644894|ref|ZP_08346011.1| putative radical SAM domain protein [Escherichia coli H736]
gi|188491201|gb|EDU66304.1| KamA family protein [Escherichia coli 53638]
gi|226840266|gb|EEH72268.1| KamA family protein [Escherichia sp. 1_1_43]
gi|300315484|gb|EFJ65268.1| KamA family protein [Escherichia coli MS 175-1]
gi|300451442|gb|EFK15062.1| KamA family protein [Escherichia coli MS 116-1]
gi|301075207|gb|EFK90013.1| KamA family protein [Escherichia coli MS 146-1]
gi|309704652|emb|CBJ04002.1| radical SAM superfamily protein [Escherichia coli ETEC H10407]
gi|310331581|gb|EFP98837.1| kamA family protein [Escherichia coli 1827-70]
gi|323935461|gb|EGB31799.1| KamA family protein [Escherichia coli E1520]
gi|331035869|gb|EGI08107.1| putative radical SAM domain protein [Escherichia coli H736]
Length = 342
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 165/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|82546608|ref|YP_410555.1| hypothetical protein SBO_4310 [Shigella boydii Sb227]
gi|187731271|ref|YP_001882838.1| KamA family protein [Shigella boydii CDC 3083-94]
gi|81248019|gb|ABB68727.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|187428263|gb|ACD07537.1| KamA family protein [Shigella boydii CDC 3083-94]
gi|320176659|gb|EFW51700.1| Lysine 2,3-aminomutase [Shigella dysenteriae CDC 74-1112]
gi|320187554|gb|EFW62238.1| Lysine 2,3-aminomutase [Shigella flexneri CDC 796-83]
gi|332087151|gb|EGI92285.1| kamA family protein [Shigella boydii 3594-74]
Length = 349
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 163/315 (51%), Gaps = 4/315 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVK 321
P ++ G K
Sbjct: 320 PKLAREIGGEPSKTP 334
>gi|238787518|ref|ZP_04631316.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii
ATCC 33641]
gi|238724305|gb|EEQ15947.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii
ATCC 33641]
Length = 335
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 166/324 (51%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + + + + + + P NP+DP+ Q
Sbjct: 8 LQQLADVITDPDELLRILFLNEHPSLQQGSAARRLFPLRVPRAFVARMQPGNPSDPLLLQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P +DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 68 VLTAREEFIAAPGFTDDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 126
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR
Sbjct: 127 QDNQG--NKANWQQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLVGELESITHIKRLR 184
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI P L Q L ++ V + H NH E ++++L AG+ LL+
Sbjct: 185 IHSRLPVVIPARITPALCQLLGDSRLQVLMVTHINHANEIDSSFRDSMAQLKRAGVTLLN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+N+D ++LA L + I PYY+H D G +HF + +E ++++ L
Sbjct: 245 QSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVNDDEARQLMKGLLS 304
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 305 RVSGYLVPRLAREIGGQPSKTPLD 328
>gi|110835306|ref|YP_694165.1| hypothetical protein ABO_2445 [Alcanivorax borkumensis SK2]
gi|110648417|emb|CAL17893.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 363
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 3/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T +L + E + + + + + + L+ NP+DP+ RQ + +E+
Sbjct: 50 ITDPAELLAMLDLPVESLPDALSAATDFPLRVPRSYVALMERGNPHDPLLRQVLSVADEM 109
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
P DP+ + H+ + G++H+Y R LL + C V+CR+CFRR T LS
Sbjct: 110 VAQPGFSADPLDEAEHTAVPGLLHKYHGRALLVVTGACAVHCRYCFRRHFPYQ---THLS 166
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
K + AL ++ + I EVI +GGDPL LS++RL+++L L I H++ LR HSR P+V
Sbjct: 167 GKRWKQALEWLAARPDINEVILSGGDPLTLSNQRLEQLLDALESIPHLRRLRIHSRTPVV 226
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+R+ L L + +H NHP E S + L +AGI LL+QSVLL G+
Sbjct: 227 IPERLEVGLKALLTWRRWQTVLVLHGNHPREISPALVERCRDLRSAGITLLNQSVLLAGV 286
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + LA L + + PYYLH D G +HF ++ E ++I A+L+ ++ G P
Sbjct: 287 NDRADTLAELSDRLFDAGVMPYYLHQLDAVQGAAHFAVSDEAAREIHAALRARLPGFLVP 346
Query: 308 FYILDLPGGYGKVKI 322
+ PG K +
Sbjct: 347 RLTREEPGEPAKTVL 361
>gi|86147223|ref|ZP_01065538.1| lysine 2;3-aminomutase [Vibrio sp. MED222]
gi|85834938|gb|EAQ53081.1| lysine 2;3-aminomutase [Vibrio sp. MED222]
Length = 340
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L A I + +S+ + + NP+DP+ RQ +
Sbjct: 19 QLSN-AISDPTKLLEALEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE ++ DP+ + + + G++H+Y R L+ + C + CR+CFRR
Sbjct: 78 PLSEEFDVHQGYSADPL-EEQENAIPGLLHKYKSRALMIVKGGCAINCRYCFRRHFPYQD 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L Y+ + +I EVI +GGDPL+ L+ ++ + I HV+ +R H
Sbjct: 137 NKG--SKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ EL Q L V + H NH E + E A +L G LL+Q
Sbjct: 195 SRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+N+ L L + I PYY+H D G +HF ++ EE + L ++
Sbjct: 255 VMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D +
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLN 338
>gi|83591564|ref|YP_425316.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170]
gi|83574478|gb|ABC21029.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170]
Length = 324
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 170/317 (53%), Positives = 219/317 (69%), Gaps = 2/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+L S DL A LI E++ E+ + Y++A+ +A I P+ +ARQF+P E
Sbjct: 6 SLRSLTDLAEAGLIAPERLAELAPVVARYALAIPAGLAQAIAEAGPDSALARQFVPSAAE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L LPEE DPIGD+ HSP+KG+VHRYPDR+LLK +H CPVYCRFCFRRE VG G L
Sbjct: 66 LTTLPEEITDPIGDHAHSPVKGLVHRYPDRVLLKPVHACPVYCRFCFRREHVGP-GGESL 124
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + LAYI + +IWEV+ +GGDP+ILS +RL +L L I H+ LR HSRVP+
Sbjct: 125 SEAEMARVLAYIGDHREIWEVVLSGGDPMILSARRLDALLGALEAIPHIGSLRIHSRVPV 184
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+DP RI P +I L+ + KPV++ IHANHP EF+ A A ++ LA+AG+ LLSQSVLLKG
Sbjct: 185 LDPARITPAVIAALRRS-KPVWLVIHANHPDEFTAAARACVASLADAGVPLLSQSVLLKG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMRTFV RIKPYYLH D+A GT+HFR +++EG+ +VA+L+ SGLCQ
Sbjct: 244 VNDDLATLTRLMRTFVANRIKPYYLHQTDMAPGTAHFRTSLDEGRALVAALRATASGLCQ 303
Query: 307 PFYILDLPGGYGKVKID 323
P Y+LD P G GK ID
Sbjct: 304 PTYVLDAPDGPGKRPID 320
>gi|323166756|gb|EFZ52513.1| kamA family protein [Shigella sonnei 53G]
Length = 320
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 165/316 (52%), Gaps = 4/316 (1%)
Query: 9 TSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
T +L I ++ + + +++ + + + NP+DPI RQ + ++E
Sbjct: 2 TDPGELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPILRQVLTSQDEF 61
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ +
Sbjct: 62 VVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG--N 118
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PIV
Sbjct: 119 KRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIV 178
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G+
Sbjct: 179 IPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRGV 238
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG P
Sbjct: 239 NDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVP 298
Query: 308 FYILDLPGGYGKVKID 323
++ G K +D
Sbjct: 299 KLAREIGGEPSKTPLD 314
>gi|123440740|ref|YP_001004732.1| hypothetical protein YE0356 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087701|emb|CAL10486.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 345
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 164/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + + + + + + P NP+DP+ Q
Sbjct: 16 LQQLADVITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTAREEFIAAPGFTNDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL Y+++ ++ E+IF+GGDPL+ L +L + I H++ LR
Sbjct: 135 QDNQG--NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWLLDEIENISHIKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI EL Q L ++ V + H NH E ++++L AG+ LL+
Sbjct: 193 IHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHANEIDASFRDSMAQLKRAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+NDD E+LA L + I PYY+H D G +HF + +E ++++ L
Sbjct: 253 QSVLLRGVNDDDEVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 313 RVSGYLVPRLAREIGGQPSKTPLD 336
>gi|262401937|ref|ZP_06078502.1| lysine 2,3-aminomutase [Vibrio sp. RC586]
gi|262351909|gb|EEZ01040.1| lysine 2,3-aminomutase [Vibrio sp. RC586]
Length = 340
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 159/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + P DP+ + N + + G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLGAEFEVHPGYSNDPLDEQN-NAIPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPLI L +++ + I H++ LR
Sbjct: 136 DNKG--SKAIWQQSLDYIAQNPQLNEVIFSGGDPLIAKDHELAWLIERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + + + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+N+ E L T + I PYYLH D G +HF ++ +E ++++ L E+
Sbjct: 254 GVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQLMGGLIER 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGKPSKTPLD 336
>gi|330837285|ref|YP_004411926.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides
DSM 17374]
gi|329749188|gb|AEC02544.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides
DSM 17374]
Length = 358
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 115/335 (34%), Positives = 188/335 (56%), Gaps = 4/335 (1%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
++ +++ K+ ++ ++ A+LI P + +DPI RQ +P E+ P E EDP
Sbjct: 24 IVLTEKEQAWEKDGTSP-PFGVSTYYASLITPSDSDDPIRRQILPTSCEMMYSPGESEDP 82
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ + HS ++HRY +R+ + C VYCR CFRR G+Q+G +++D AA Y
Sbjct: 83 LAEEEHSVTSRLIHRYAERVAFLVTDACAVYCRHCFRRRFTGTQRG-PATTEDIIAAARY 141
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
+ ++ E++FTGGD LS++++ ++ R ++ I+R SRVP+V P RI L+
Sbjct: 142 VGAHQEVKEILFTGGDMFTLSNEKIDALIGEFRAVRPDLIIRLCSRVPVVLPSRITDGLM 201
Query: 198 QCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+K+ P ++ + NHP E + ++ A +R +AGI + +QSVLL+G+NDD IL
Sbjct: 202 AVMKKHSSAPFFLMVQFNHPRELTAQSREATARFIDAGIPVFNQSVLLRGVNDDAGILEE 261
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L + RIKPYYL DL GT+H R+ +E+G +V L+ ++SGL P Y +DLP G
Sbjct: 262 LCNGLLAARIKPYYLFQGDLVEGTAHLRVPLEKGLALVKELRRRLSGLAMPVYAVDLPEG 321
Query: 317 YGKVKIDTHNIKKVG-NGSYCITDHHNIVHDYPPK 350
GKV +D+ +K +G++ Y
Sbjct: 322 GGKVPVDSMYLKGRDSDGAWVFETPDGGERRYRDP 356
>gi|157368658|ref|YP_001476647.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans
568]
gi|157320422|gb|ABV39519.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans
568]
Length = 342
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 103/317 (32%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + ++ + +E +++ + + P + NDP+ RQ + EE
Sbjct: 23 ITDPDELLQLLSLNTHPELPQGREARRLFALRVPRSFVARMQPGDANDPLLRQVLTASEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FINAPGFTTDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L I+H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLIGELEAIEHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI PEL + L + V + H NH E E A++++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITPELCRRLSASRLQVLMVTHINHANEIDRELQASMAQLRLAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD + LA L + I PYY+H D G +HF ++ +E + I+ +L KISG
Sbjct: 260 INDDADTLAALSNALFDAGILPYYIHVLDKVQGAAHFMVSDDEARTIMQALLGKISGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLTREVGGKPSKTPLD 336
>gi|50122897|ref|YP_052064.1| hypothetical protein ECA3977 [Pectobacterium atrosepticum SCRI1043]
gi|49613423|emb|CAG76874.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 347
Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + ++ + + +++ + A + NP+DP+ Q
Sbjct: 16 LQQLADVITDPDELLQLLALNDHAKLRQGNDARRLFALRVPRAFAARMQKGNPDDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ + E + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTARAEFIVTPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR
Sbjct: 135 QDNQG--NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L L + V + H NHP E + +++RL +G+ LL+
Sbjct: 193 IHSRLPVVIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRSGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND E LA L + I PYYLH D G +HF + E + +V +L +
Sbjct: 253 QSVLLRGVNDSAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALMK 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
K+SG P ++ G K +D
Sbjct: 313 KVSGYLVPRLAREIGGEASKTPLD 336
>gi|331681166|ref|ZP_08381803.1| putative radical SAM domain protein [Escherichia coli H299]
gi|331081387|gb|EGI52548.1| putative radical SAM domain protein [Escherichia coli H299]
Length = 342
Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 165/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + NP+DP+ RQ + +EE
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 YIVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ L+QSVLL+G
Sbjct: 200 VIPARITDALVERFAHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTQLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFVVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|218708305|ref|YP_002415926.1| hypothetical protein VS_0243 [Vibrio splendidus LGP32]
gi|218321324|emb|CAV17274.1| Hypothetical protein VS_0243 [Vibrio splendidus LGP32]
Length = 340
Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 151/322 (46%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L A I + +S+ + + NP+DP+ RQ +
Sbjct: 19 QLSN-AISDPTKLLEALEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + + G++H+Y R L+ + C + CR+CFRR
Sbjct: 78 PLSEEFEVHQGYSADPL-EEQDNAIPGLLHKYKSRALMIVKGGCAINCRYCFRRHFPYQD 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L Y+ + +I EVI +GGDPL+ L+ ++ + I HV+ +R H
Sbjct: 137 NKG--SKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ EL Q L V + H NH E + E A +L G LL+Q
Sbjct: 195 SRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+N+ L L + I PYY+H D G +HF ++ EE + L ++
Sbjct: 255 VMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLD 336
>gi|229521724|ref|ZP_04411142.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80]
gi|229341318|gb|EEO06322.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80]
Length = 340
Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 161/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPLRLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E I P DP+ + N++ G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLSAEFEIHPGYSHDPLDEQNNTV-PGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR
Sbjct: 136 DNKG--SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEVNLELKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E+
Sbjct: 254 GVLLKGVNDTLDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|91228408|ref|ZP_01262334.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01]
gi|254230273|ref|ZP_04923663.1| lysine 2;3-aminomutase [Vibrio sp. Ex25]
gi|262393005|ref|YP_003284859.1| lysine 2,3-aminomutase [Vibrio sp. Ex25]
gi|269966836|ref|ZP_06180909.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|91188049|gb|EAS74355.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01]
gi|151937210|gb|EDN56078.1| lysine 2;3-aminomutase [Vibrio sp. Ex25]
gi|262336599|gb|ACY50394.1| lysine 2,3-aminomutase [Vibrio sp. Ex25]
gi|269828503|gb|EEZ82764.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 340
Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 161/322 (50%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + P DP+ + + + G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 78 PLSDEFEVHPGYSNDPL-EEQDNEVPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + +I H++ LR H
Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAHIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ EL Q L+ + + + H NH E ++E + +L AG+ LL+Q
Sbjct: 195 SRLPVVIPARVTDELCQLLQASRLQIILVTHINHANEINDEFAEQMFKLKRAGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND E L + I PYYLH D G +H+ ++ EE + I+ L ++
Sbjct: 255 VLLKGVNDSVEAQVALSEALFDAGILPYYLHVLDKVQGAAHYFISDEEAKAIMRGLITRV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLD 336
>gi|237729080|ref|ZP_04559561.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226908809|gb|EEH94727.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 342
Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + I ++ + ++ +++ + + NP+DP+ RQ + +EE
Sbjct: 23 VTDPDELLHLLNIDADEKLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTAQEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVAAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + A+ YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQVAIDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+S L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEGLVERFAHSSLQILLVNHINHANEIDETFRQAMSSLRAAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARRIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|269962491|ref|ZP_06176840.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832787|gb|EEZ86897.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 340
Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 159/322 (49%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEMLEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + L G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 78 PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL L+ + + + H NH E + E A +++L AG+ LL+Q
Sbjct: 195 SRLPVVIPARITDELCHLLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +N+ E L + I PYYLH D G +H+ ++ EE ++I+ + ++
Sbjct: 255 VLLKDVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEAKEIMRGVITRV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLD 336
>gi|283834764|ref|ZP_06354505.1| KamA family protein [Citrobacter youngae ATCC 29220]
gi|291069009|gb|EFE07118.1| KamA family protein [Citrobacter youngae ATCC 29220]
Length = 342
Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 165/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLHLLNLDADEKLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTAQQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVAEPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQVALDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L + + + H NH E E A+ RL AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEGLADRFAHSSLQILLVNHINHANEVDETFRQAMVRLRTAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|258625680|ref|ZP_05720559.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258581918|gb|EEW06788.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 340
Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats.
Identities = 99/323 (30%), Positives = 158/323 (48%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANAISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E P DP+ + N + + G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLGAEFEAHPGYSNDPLDEQN-NAIPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR
Sbjct: 136 DNKG--SKVIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLVERIATIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAINVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+N+ E L T + I PYYLH D G +HF + +E ++I+A L E+
Sbjct: 254 GVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVGDDEARQIMAGLIER 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGKPSKTPLD 336
>gi|296535943|ref|ZP_06898093.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957]
gi|296263737|gb|EFH10212.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957]
Length = 683
Score = 338 bits (868), Expect = 7e-91, Method: Composition-based stats.
Identities = 151/335 (45%), Positives = 205/335 (61%), Gaps = 1/335 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L+ +TL A L A L ++ + Y+IALTP + LI+ +P DPIARQ++
Sbjct: 337 RLKPRTLRDAAALVEAGLAPASAQPALEALQQVYAIALTPAVQALIDRADPADPIARQYV 396
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL LP ER DP D +P+KG+VHRYPDR LLK L CPVYCRFCFRRE+VG
Sbjct: 397 PDPAELVTLPRERSDPTSDAPFTPVKGVVHRYPDRALLKPLLACPVYCRFCFRREVVGPD 456
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G +LS + EAAL + Q+ E I TGGDPL+LS +RL +L L I H+ I+R H
Sbjct: 457 GG-LLSEPELEAALDWFARTPQVREAILTGGDPLMLSPRRLAHILARLSSIPHLDIIRLH 515
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P+R+ L L K +++ +HANH EFS A A++RL AG+ LL QS
Sbjct: 516 TRVPVAAPERVTAALADTLAATDKALFLCVHANHAREFSAGARTALTRLRRAGVALLGQS 575
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA L R + ++KPYYLH D A GT+ F + IE+G+ I+ +L+ +
Sbjct: 576 VLLRGVNDSADALAALFRAMLAAQVKPYYLHQLDRAPGTARFEVPIEQGRAILRALRGTL 635
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
+GL P Y+LDLPGG GK + + G
Sbjct: 636 TGLAWPAYVLDLPGGAGKAPLGPDFARAEGADWLV 670
>gi|238784793|ref|ZP_04628795.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC
43970]
gi|238714306|gb|EEQ06316.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC
43970]
Length = 335
Score = 338 bits (868), Expect = 7e-91, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + + + + + + P +P DP+ Q
Sbjct: 8 LQQLADVITDPDELLRILFLNEHPNLQQGSAARRLFPLRVPRAFVARMQPGDPFDPLLLQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 68 VLTAREEFIAAPGFTNDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 126
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR
Sbjct: 127 QDNQG--NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLLDELESISHIKRLR 184
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI L Q L ++ V + H NH E + ++++L AG+ LL+
Sbjct: 185 IHTRLPVVIPARITAALCQRLSDSRLQVLMVTHINHANEIDQPLRDSMAQLKQAGVTLLN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+N+D E+L L + I PYY+H D G +HF + +E ++++ L
Sbjct: 245 QSVLLRGVNNDAEVLTTLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 304
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 305 RVSGYLVPRLAREIGGQPSKTPLD 328
>gi|30065523|ref|NP_839694.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T]
gi|30043787|gb|AAP19506.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T]
gi|281603612|gb|ADA76596.1| KamA family protein [Shigella flexneri 2002017]
gi|313646382|gb|EFS10844.1| kamA family protein [Shigella flexneri 2a str. 2457T]
gi|332749021|gb|EGJ79444.1| kamA family protein [Shigella flexneri K-671]
gi|332749289|gb|EGJ79710.1| kamA family protein [Shigella flexneri 4343-70]
gi|332761892|gb|EGJ92166.1| kamA family protein [Shigella flexneri 2747-71]
gi|332763192|gb|EGJ93435.1| kamA family protein [Shigella flexneri 2930-71]
gi|333009379|gb|EGK28835.1| kamA family protein [Shigella flexneri K-218]
gi|333011918|gb|EGK31303.1| kamA family protein [Shigella flexneri K-304]
Length = 342
Score = 338 bits (868), Expect = 7e-91, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|168231369|ref|ZP_02656427.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194472138|ref|ZP_03078122.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194458502|gb|EDX47341.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205334318|gb|EDZ21082.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 342
Score = 338 bits (867), Expect = 7e-91, Method: Composition-based stats.
Identities = 103/317 (32%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L +AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|320539691|ref|ZP_08039355.1| putative lysine aminomutase [Serratia symbiotica str. Tucson]
gi|320030303|gb|EFW12318.1| putative lysine aminomutase [Serratia symbiotica str. Tucson]
Length = 342
Score = 338 bits (867), Expect = 8e-91, Method: Composition-based stats.
Identities = 101/317 (31%), Positives = 168/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + ++ + ++ +++ + A + P + NDP+ RQ + KEE
Sbjct: 23 ITNPDELLRLLSLSTHPELSQGRDARRLFALRVPRAFAARMRPGDANDPLLRQVLTAKEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C + CR+CFRR
Sbjct: 83 FINAPGFTTDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELGWLIGELAAIPHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI PEL + L + V + H NH E E AA+++L AG+ LL+QSVL++
Sbjct: 200 VIPARITPELCRWLSASRLQVLMITHINHANEIDRELQAAMAQLRLAGVTLLNQSVLMRR 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD + LA L + I PYY+H D G +HF ++ +E + I+ +L K+SG
Sbjct: 260 INDDADTLAALSNALFDAGILPYYIHMLDKVQGATHFMVSDDEARTIMQALLSKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLTREVGGKPSKTPLD 336
>gi|294495163|ref|YP_003541656.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
gi|292666162|gb|ADE36011.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
Length = 358
Score = 338 bits (867), Expect = 8e-91, Method: Composition-based stats.
Identities = 101/355 (28%), Positives = 191/355 (53%), Gaps = 14/355 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ + S + L + + + + IK + H TP A+L++ +P PI +Q +
Sbjct: 8 QITNQ-INSLEKLEEIINLTESEREAIKTLDTH--WGTTPYFASLMDKDDPECPIRKQVV 64
Query: 62 PQKEELNILPEEREDPIGDNNHSPLK----GIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
P +E + ++ + N + + I +Y DR+ + C +YCR CFR+E+
Sbjct: 65 PSLQESHNKYGMKDYLVWKENRATEEVRPDSIARQYKDRVAFTVFQECGIYCRHCFRKEL 124
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V S + + + + +I++ ++ +V+ TGGDPL+LS ++++ ++++LR I HV++
Sbjct: 125 VVSHDLKL--DFNVDDGIEWIRQHPEVRDVLITGGDPLLLSDEKIEYIIESLRDIPHVEM 182
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGII 236
+R SR+PIV P RI L + L P+++ NHP E +++ A+ L +AG+
Sbjct: 183 IRIGSRLPIVLPHRITDNLKRILGGYHDVPIWLNTQCNHPKEITDKTKRAVYDLVSAGVN 242
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA- 295
+ +Q+VLLKGINDD + + +L + + RI+PYYL + + A G HFR +E+G +++
Sbjct: 243 VGNQAVLLKGINDDVQTIRDLHQKLLTARIRPYYLFYCEPAPGIDHFRTPVEKGAELIRD 302
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTH-NIKKVGNGSYCITDHHNIVHDYPP 349
L+ +GL QP Y+ + GK+ + + Y + +H + + P
Sbjct: 303 GLRGHTTGLAQPMYV--IATNVGKIPLMPDYYMVDKDEEKYVLRNHRGELTEIPN 355
>gi|253690127|ref|YP_003019317.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251756705|gb|ACT14781.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 351
Score = 338 bits (867), Expect = 9e-91, Method: Composition-based stats.
Identities = 102/324 (31%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + ++ + + +++ + A + NP+DP+ Q
Sbjct: 16 LQQLADVITDPDELLQLLALNDHAKLRQGNDARRLFALRVPRAFAARMQKGNPDDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTAREEFTATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR
Sbjct: 135 QDNQG--NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L L + V + H NHP E + A++RL AG+ LL+
Sbjct: 193 IHSRLPVVIPARITDALCDRLSRSSLQVLLVTHINHPQEIDTDLTQAMARLRRAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND + LA L + I PYYLH D G +HF + E + +V +L +
Sbjct: 253 QSVLLRGVNDSADTLAQLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARILVKALLK 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
K+SG P ++ G K +D
Sbjct: 313 KVSGYLVPRLAREIGGEASKTPLD 336
>gi|24115503|ref|NP_710013.1| hypothetical protein SF4302 [Shigella flexneri 2a str. 301]
gi|24054828|gb|AAN45720.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
Length = 342
Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|110808069|ref|YP_691589.1| hypothetical protein SFV_4304 [Shigella flexneri 5 str. 8401]
gi|110617617|gb|ABF06284.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 342
Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 165/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I ++ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 AIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|289809541|ref|ZP_06540170.1| hypothetical protein Salmonellaentericaenterica_35962 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 337
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 18 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 77
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 78 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 134
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 135 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 194
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 195 VIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 254
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 255 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 314
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 315 PRLAREIGGEPSKTPLD 331
>gi|77465239|ref|YP_354742.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1]
gi|77389657|gb|ABA80841.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1]
Length = 340
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 156/347 (44%), Positives = 218/347 (62%), Gaps = 10/347 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
+ L + +DL +A L + + ++E++ + I LTP + +DP +ARQF+P
Sbjct: 3 RALENLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+
Sbjct: 57 DELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV
Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL
Sbjct: 175 PVVAPHRIDDNMLRALLG-PIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND + L L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+
Sbjct: 234 RGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRPTIDEGRALMAELRRRITGI 293
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 294 GLPSYVLDLPGGFGKVPLTYDHLIADGPGRWQVRDPQGGLHPYADPD 340
>gi|270264978|ref|ZP_06193241.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13]
gi|270040912|gb|EFA14013.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13]
Length = 342
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + +E +++ + A + P + NDP+ RQ + EE
Sbjct: 23 ITDPDELLQLLSLNTHPDLPQGREARRLFALRVPRAFAARMRPGDANDPLLRQVLTASEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FINAPGFTTDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLIGELEAIAHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI PEL + L + V + H NH E E A++++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITPELCRRLSASRLQVLMVTHINHANEIDRELQASMAQLRLAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ + LA L + I PYY+H D G +HF ++ +E + I+ +L K+SG
Sbjct: 260 INDNADTLAALSNALFDAGILPYYIHVLDKVQGAAHFMVSDDEARAIMQALLSKVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLTREVGGKPSKTPLD 336
>gi|300715020|ref|YP_003739823.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
gi|299060856|emb|CAX57963.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 342
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 161/317 (50%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + ++ + +++ + A+ + +P DP+ Q I +E
Sbjct: 23 ITDPNELLQLLGLDSHPELTAGSDARRLFALRVPRAFASRMQKGDPQDPLLLQVITASQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FVDAPGYSTDPLDEQS-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI+E+ ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+
Sbjct: 140 NKRNWQQALEYIREQPELDEIIFSGGDPLMAKDSELDWLIGELEQIPHLKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L ++ V + H NH E + A+ L +AG+ LL+QSVLL+
Sbjct: 200 VIPSRITRTLCQRLAQSRLQVLMVTHINHAQEIDDALRDALQLLKSAGVTLLNQSVLLRN 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD LA L + + PYYLH D G +HF ++ ++ + I+ L +SG
Sbjct: 260 INDDATTLATLSNALFDAGVLPYYLHVLDKVQGAAHFYVSDDDARAIMRELLANVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|22124525|ref|NP_667948.1| hypothetical protein y0611 [Yersinia pestis KIM 10]
gi|45440363|ref|NP_991902.1| hypothetical protein YP_0509 [Yersinia pestis biovar Microtus str.
91001]
gi|51594759|ref|YP_068950.1| hypothetical protein YPTB0407 [Yersinia pseudotuberculosis IP
32953]
gi|108809919|ref|YP_653835.1| hypothetical protein YPA_3929 [Yersinia pestis Antiqua]
gi|108813477|ref|YP_649244.1| hypothetical protein YPN_3317 [Yersinia pestis Nepal516]
gi|145600867|ref|YP_001164943.1| hypothetical protein YPDSF_3620 [Yersinia pestis Pestoides F]
gi|150260603|ref|ZP_01917331.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125]
gi|153950672|ref|YP_001402627.1| KamA family iron-sulfur cluster-binding protein [Yersinia
pseudotuberculosis IP 31758]
gi|218927556|ref|YP_002345431.1| hypothetical protein YPO0353 [Yersinia pestis CO92]
gi|229836612|ref|ZP_04456778.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A]
gi|229840221|ref|ZP_04460380.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229842302|ref|ZP_04462457.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229903959|ref|ZP_04519072.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516]
gi|21957321|gb|AAM84199.1|AE013663_5 hypothetical protein y0611 [Yersinia pestis KIM 10]
gi|45435219|gb|AAS60779.1| Lysine 2,3-aminomutase [Yersinia pestis biovar Microtus str. 91001]
gi|51588041|emb|CAH19647.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108777125|gb|ABG19644.1| L-lysine 2,3-aminomutase [Yersinia pestis Nepal516]
gi|108781832|gb|ABG15890.1| L-lysine 2,3-aminomutase [Yersinia pestis Antiqua]
gi|115346167|emb|CAL19035.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145212563|gb|ABP41970.1| L-lysine 2,3-aminomutase [Yersinia pestis Pestoides F]
gi|149290011|gb|EDM40088.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125]
gi|152962167|gb|ABS49628.1| iron-sulfur cluster-binding protein, KamA family [Yersinia
pseudotuberculosis IP 31758]
gi|229679729|gb|EEO75832.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516]
gi|229690612|gb|EEO82666.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229696587|gb|EEO86634.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229706296|gb|EEO92304.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A]
gi|320013781|gb|ADV97352.1| lysine 2,3-aminomutase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 342
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + + + + + + P N +DP+ Q
Sbjct: 16 LQQLADVITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTAREEFITAPGFTHDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR
Sbjct: 135 QDNQG--NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI L Q L + V + H NH E +++RL AG+ LL+
Sbjct: 193 IHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+N+D ++LA L + I PYY+H D G +HF + +E ++++ L
Sbjct: 253 QSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 313 RVSGYLVPRLTREVGGEPSKTPLD 336
>gi|153834930|ref|ZP_01987597.1| lysine 2;3-aminomutase [Vibrio harveyi HY01]
gi|148868610|gb|EDL67696.1| lysine 2;3-aminomutase [Vibrio harveyi HY01]
Length = 340
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 160/322 (49%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEMLEIDPSPWLDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + L G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 78 PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q L+ + + + H NH E + E A +++L AG+ LL+Q+
Sbjct: 195 SRLPVVIPARITDELCQLLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQA 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +N+ E L + I PYYLH D G +H+ ++ EE + I+ + ++
Sbjct: 255 VLLKNVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEAKAIMRGVITQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLD 336
>gi|317493548|ref|ZP_07951969.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918491|gb|EFV39829.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 344
Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats.
Identities = 97/325 (29%), Positives = 163/325 (50%), Gaps = 4/325 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + + +++ + A + +PNDP+ Q
Sbjct: 16 LQQLADVITEPAELLEYLALSDSPEWQKGHDARRLFALRVPYAFARRMKKGDPNDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+ E P DP+ + + + + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VMTSASEFITTPGYSTDPLEEQDDAIAVPGLLHKYINRALLLVKGGCAVNCRYCFRRHFP 135
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + AL YI+++ ++ E+IF+GGDPL+ L +L + I H++ L
Sbjct: 136 YQDNQG--NKANWRQALDYIRQQPELDEIIFSGGDPLMAKDHELAWLLDEIEAIPHIKRL 193
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R HSR+P+V P RI L + ++ + + H NH E E A++RL +AG+ LL
Sbjct: 194 RIHSRLPVVIPARITETLTKRFSQSHLQILLVTHINHANEIDRELCDAMTRLKHAGVTLL 253
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q VLL+G+ND+ + LA L + I PYYLH D G +HF ++ +E + I+ L
Sbjct: 254 NQGVLLRGVNDNADTLAALSNALFDAGIMPYYLHVLDRVQGAAHFMVSDDEARVIMRELM 313
Query: 299 EKISGLCQPFYILDLPGGYGKVKID 323
K+SG P ++ G K ID
Sbjct: 314 TKVSGYMVPKLTREIGGEPSKTPID 338
>gi|162419358|ref|YP_001605297.1| KamA family iron-sulfur cluster-binding protein [Yersinia pestis
Angola]
gi|165926739|ref|ZP_02222571.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165936461|ref|ZP_02225029.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. IP275]
gi|166011849|ref|ZP_02232747.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166214027|ref|ZP_02240062.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167400635|ref|ZP_02306144.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167419290|ref|ZP_02311043.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167423829|ref|ZP_02315582.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|170026033|ref|YP_001722538.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis YPIII]
gi|186893766|ref|YP_001870878.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis PB1/+]
gi|270489053|ref|ZP_06206127.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27]
gi|294502464|ref|YP_003566526.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
Z176003]
gi|162352173|gb|ABX86121.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
Angola]
gi|165915577|gb|EDR34186.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. IP275]
gi|165921362|gb|EDR38586.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165989208|gb|EDR41509.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166204822|gb|EDR49302.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166963284|gb|EDR59305.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167050003|gb|EDR61411.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167057999|gb|EDR67745.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169752567|gb|ACA70085.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis YPIII]
gi|186696792|gb|ACC87421.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis PB1/+]
gi|262360494|gb|ACY57215.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
D106004]
gi|270337557|gb|EFA48334.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27]
gi|294352923|gb|ADE63264.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
Z176003]
Length = 334
Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + + + + + + P N +DP+ Q
Sbjct: 8 LQQLADVITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 68 VLTAREEFITAPGFTHDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 126
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR
Sbjct: 127 QDNQG--NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLR 184
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI L Q L + V + H NH E +++RL AG+ LL+
Sbjct: 185 IHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+N+D ++LA L + I PYY+H D G +HF + +E ++++ L
Sbjct: 245 QSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 304
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 305 RVSGYLVPRLTREVGGEPSKTPLD 328
>gi|16763155|ref|NP_458772.1| hypothetical protein STY4693 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144634|ref|NP_807976.1| hypothetical protein t4385 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213621858|ref|ZP_03374641.1| hypothetical protein SentesTyp_31779 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648405|ref|ZP_03378458.1| hypothetical protein SentesTy_14649 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213865531|ref|ZP_03387650.1| hypothetical protein SentesT_37675 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|25305130|pir||AH1045 conserved hypothetical protein yjeK [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16505463|emb|CAD06813.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140273|gb|AAO71836.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 342
Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|330862365|emb|CBX72524.1| uncharacterized kamA family protein yjeK [Yersinia enterocolitica
W22703]
Length = 328
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 98/324 (30%), Positives = 164/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
MQ +T +L + + + + + + + + P NP+DP+ Q
Sbjct: 1 MQQLADVITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQ 60
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C + CR+CFRR
Sbjct: 61 VLTAREEFIAAPGFTNDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPY 119
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL Y+ + ++ E+IF+GGDPL+ L +L + I H++ LR
Sbjct: 120 QDNQG--NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLLDEIESISHIKRLR 177
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI EL Q L ++ V + H NH E ++++L AG+ LL+
Sbjct: 178 IHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDSMAQLKRAGVTLLN 237
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+NDD E+LA L T + I PYY+H D G +HF + +E ++++ L
Sbjct: 238 QSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 297
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 298 RVSGYLVPRLAREIGGQPSKTPLD 321
>gi|290476545|ref|YP_003469450.1| putative aminomutase [Xenorhabdus bovienii SS-2004]
gi|289175883|emb|CBJ82686.1| putative aminomutase [Xenorhabdus bovienii SS-2004]
Length = 343
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 157/317 (49%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + E E + + + A + +P+DP+ Q + +EE
Sbjct: 23 ITDPDELLQLLSLNTHAMLKEGNEAKRLFPLRVPRAFAARMKKGDPHDPLLLQVLTAQEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FETHPGFSTDPL-EEQHSAVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYEDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKNNWQLALDYIEQHPELDEIIFSGGDPLMAKDHELDWLMTRLESISHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L +++ + + H NH E + L AG+ LL+QSVLL+
Sbjct: 200 VIPDRITLSLCNRFEKSQLQIIMVTHINHANEIDNTFRDKMMWLKQAGVTLLNQSVLLRN 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + LA+L T + I PYY+H D G +HF + EE + I+ L KISG
Sbjct: 260 VNDSADTLADLSNTLFDAGILPYYIHILDKVQGAAHFLVGDEEAKAIMRELLTKISGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PCLAREIGGEPSKTPLD 336
>gi|220934405|ref|YP_002513304.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7]
gi|219995715|gb|ACL72317.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7]
Length = 348
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 167/323 (51%), Gaps = 2/323 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L+ +T + L + + + + + + + + P +PNDP+ RQ +
Sbjct: 28 RLQAAAITDPEVLIRRLGLDPALLPAARRAAELFRLRVPDGYLARMRPGDPNDPLLRQVL 87
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E +P EDP+GD G++H+Y R+LL C V+CR+CFRR
Sbjct: 88 PLDAEYRDVPGFVEDPVGDGAAMVAPGLLHKYRGRVLLVTTGACAVHCRYCFRRHFPY-- 145
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +AAL YI I EVI +GGDPL LS +RL + L I HV+ LR H
Sbjct: 146 GEANPARGEWQAALDYIAGDDSIHEVILSGGDPLSLSDERLSGLAGALGEIPHVRRLRVH 205
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P++ P+R++ +L+ L+ + IHANH E A++RLA AG+ LL+QS
Sbjct: 206 SRQPVILPERVDEDLLAWLRPGRFQTVLVIHANHAREIHWPVREALARLARAGVSLLNQS 265
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+NDD + LA+L T + PYYLH D G SHF++ + ++ L+ ++
Sbjct: 266 VLLRGVNDDVDTLADLSETLSATGVMPYYLHQLDPVRGASHFQVDDDRALRLHHGLRARL 325
Query: 302 SGLCQPFYILDLPGGYGKVKIDT 324
G P + ++PG K +
Sbjct: 326 PGYLVPRLVREIPGQDAKSPLSG 348
>gi|84386955|ref|ZP_00989979.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01]
gi|84378245|gb|EAP95104.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01]
Length = 340
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 152/322 (47%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L A I +++ + + NP+DP+ RQ +
Sbjct: 19 QLSN-AISDPSKLLEALEIDPTPWQAGFAARELFALRVPLSFVERMEKGNPHDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + + G++H+Y +R L+ + C + CR+CFRR
Sbjct: 78 PLNEEFEVHQGYSADPL-EEQENAIPGLLHKYKNRALMIVKGGCAINCRYCFRRHFPYQD 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L Y+ + +I EVI +GGDPL+ L+ ++ + I HV+ +R H
Sbjct: 137 NKG--SKSVWQTSLDYVTQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ EL Q L V + H NH E + E A +L G LL+Q
Sbjct: 195 SRLPVVIPARVTDELCQLLANTRLNVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+N+ L L + + PYY+H D G +HF ++ EE ++ L ++
Sbjct: 255 VMLKGVNNSANSLKELSENLFDAGVLPYYMHVLDKVQGAAHFYISDEEAKRHFKGLISEV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLD 336
>gi|301154946|emb|CBW14409.1| predicted lysine aminomutase [Haemophilus parainfluenzae T3T1]
Length = 340
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 151/318 (47%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L + E E +++ + + NP DP+ Q +
Sbjct: 22 LKN-AISDPKILLKTLNLPVEDFAEDIAARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMT 80
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
++E +DP+ + + + I+H+Y +R+L C V CR+CFRR Q
Sbjct: 81 AQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDQN 140
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ + A+ YI +I EVIF+GGDP++ +L+ L I H+Q LR HS
Sbjct: 141 PG--NKTSWQQAIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERLEKIPHLQRLRIHS 198
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V P+RI E L ++ H NHP E EE A+ +L A + LL+QSV
Sbjct: 199 RLPVVIPERITDEFCDLLLKSPLQTVFVTHINHPNEIDEELALAMQKLVGAKVTLLNQSV 258
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLK +ND+P L L + I PYYLH D G SHF ++ E+ +I L+ S
Sbjct: 259 LLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDEKALQIYKELQALTS 318
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 319 GYLVPKLAREIGGEPNKT 336
>gi|238796052|ref|ZP_04639563.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC
43969]
gi|238719997|gb|EEQ11802.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC
43969]
Length = 335
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 165/324 (50%), Gaps = 5/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+QL +T +L + + + + + + + + P +P+DP+ Q
Sbjct: 9 LQL-ADVITDPDELLRILFLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGDPSDPLLLQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 68 VLTAREEFIAAPGFTNDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 126
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR
Sbjct: 127 QDNQG--NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLLDELESISHIKRLR 184
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI L Q L ++ V + H NH E + ++++L AG+ LL+
Sbjct: 185 IHTRLPVVIPARITAALCQRLGDSRLQVLMVTHINHTNEIDQSLRDSMAQLKQAGVTLLN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+NDD ++LA L + I PYY+H D G +HF + +E ++++ L
Sbjct: 245 QSVLLRGVNDDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 304
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 305 RVSGYLVPRLAREIGGQPSKTPLD 328
>gi|170766549|ref|ZP_02901002.1| KamA family protein [Escherichia albertii TW07627]
gi|170123987|gb|EDS92918.1| KamA family protein [Escherichia albertii TW07627]
gi|315617559|gb|EFU98165.1| kamA family protein [Escherichia coli 3431]
Length = 342
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 165/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLKIDANEKLLAGRSAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 YIAAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWKVALEYVAAHPELDEIIFSGGDPLMAKDHELDWLLTQLETIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLD 336
>gi|262364441|gb|ACY60998.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
D182038]
Length = 334
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + + + + + + P N +DP+ Q
Sbjct: 8 LQQLADVITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 68 VLTAREEFITAPGFTHDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 126
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR
Sbjct: 127 QDNQG--NKANWLKALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLR 184
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI L Q L + V + H NH E +++RL AG+ LL+
Sbjct: 185 IHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+N+D ++LA L + I PYY+H D G +HF + +E ++++ L
Sbjct: 245 QSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 304
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 305 RVSGYLVPRLTREVGGEPSKTPLD 328
>gi|271502194|ref|YP_003335220.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
gi|270345749|gb|ACZ78514.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
Length = 345
Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats.
Identities = 104/324 (32%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + K Q+ +E + + + + A + P + DP+ Q
Sbjct: 16 LQQLADVITDPDELLRLLALDKHPQLTAGREARSLFPLRVPRAFAARMRPGDARDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ K+E P +DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTAKDEFITAPGFSQDPLDEQQ-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ Q+ E+IF+GGDPL+ L +L L I H++ LR
Sbjct: 135 QDNQG--NKANWRQALDYIRQHPQLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI EL Q L ++ V + H NH E + E +++RL AG+ LL+
Sbjct: 193 IHTRLPVVIPARITAELCQRLAQSPLQVVLVTHINHANEINAELTDSMARLRRAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+GIND + L L + I PYYLH D G +HF + +E + +V L
Sbjct: 253 QSVLLRGINDRVDTLVALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDEARTLVRGLMT 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 313 QVSGYLVPNLTREIGGEASKTLLD 336
>gi|161617604|ref|YP_001591569.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553577|ref|ZP_02347326.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|168822537|ref|ZP_02834537.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194444516|ref|YP_002043593.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|200386594|ref|ZP_03213206.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205355095|ref|YP_002228896.1| hypothetical protein SG4176 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207859482|ref|YP_002246133.1| hypothetical protein SEN4103 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|161366968|gb|ABX70736.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403179|gb|ACF63401.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|199603692|gb|EDZ02237.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205274876|emb|CAR39942.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205322004|gb|EDZ09843.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205341061|gb|EDZ27825.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|206711285|emb|CAR35663.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|320088762|emb|CBY98520.1| L-lysine 2,3-aminomutase LAM; KAM [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|326630252|gb|EGE36595.1| hypothetical protein SG9_4262 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 342
Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 170/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|213052305|ref|ZP_03345183.1| hypothetical protein Salmoneentericaenterica_04842 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213428698|ref|ZP_03361448.1| hypothetical protein SentesTyphi_26121 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
Length = 342
Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|168237064|ref|ZP_02662122.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737300|ref|YP_002117279.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194712802|gb|ACF92023.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290014|gb|EDY29373.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 342
Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 170/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSHLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|148976876|ref|ZP_01813531.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3]
gi|145963750|gb|EDK29010.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3]
Length = 340
Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 156/322 (48%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L A I N +++ + + NP+DP+ RQ +
Sbjct: 19 QLSN-AISDPTKLLEALEIDPTPWQAGFAARNLFALRVPLSFVERMEKGNPHDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + + G++H+Y +R L+ + C V CR+CFRR
Sbjct: 78 PLSEEFEVHEGYSADPL-EEQDNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPYQD 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L Y+ + S+I EVI +GGDPL+ ++ ++ + I HV+ +R H
Sbjct: 137 NKG--SKSVWQTSLDYVAQHSEINEVILSGGDPLMAKDSEIEWLIHAIEQIPHVETVRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q L + V + H NH E + E A+ +L +G LL+Q
Sbjct: 195 SRLPVVIPARITDELCQTLSKTRLNVVMVSHINHANEINVELKQALLKLKFSGATLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+N+ L L + I PYY+H D G +HF ++ EE + L ++
Sbjct: 255 VMLKGVNNSANSLKELSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLD 336
>gi|198243525|ref|YP_002218222.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|197938041|gb|ACH75374.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|326626024|gb|EGE32369.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
Length = 342
Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 170/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|156972506|ref|YP_001443413.1| lysine 2;3-aminomutase [Vibrio harveyi ATCC BAA-1116]
gi|156524100|gb|ABU69186.1| hypothetical protein VIBHAR_00138 [Vibrio harveyi ATCC BAA-1116]
Length = 340
Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 159/322 (49%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEMLEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + L G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 78 PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWIKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q L+ + + + H NH E + E A +++L AG+ LL+Q
Sbjct: 195 SRLPVVIPARITDELCQRLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +N+ E L + I PYY+H D G +H+ ++ EE + I+ + ++
Sbjct: 255 VLLKDVNNSIEAQVALNEALFDAGILPYYVHVLDKVQGAAHYFVSDEEAKTIMRGVITRV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLD 336
>gi|197334541|ref|YP_002157135.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11]
gi|197316031|gb|ACH65478.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11]
Length = 340
Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 163/317 (51%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+++ L + I ++ E +++ + + + NP DP+ RQ +P +E
Sbjct: 23 AISNPHQLLSTLGIDSAPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + G++H+Y +R+LL + C V CR+CFRR
Sbjct: 83 FEVHEGYSNDPL-EEQDNDQPGLLHKYKNRVLLIVKGGCAVNCRYCFRRHFPYQDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + ++ YI +I EVIF+GGDPL+ LQ +++ + I H++ LR HSR+P+
Sbjct: 140 SKTVWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIEHIEAIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q K+ + + H NH E ++ I+++ +L A + LL+QSVLLKG
Sbjct: 200 VIPNRITDTLCQLFKKTRLQIILVTHINHANEINQTLISSMKKLKLAHVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + L L + I PYYLH D G +HF ++ E+ ++++ L E +SG
Sbjct: 260 VNDNTDTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDEKAKQLMGELIENVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PTLAREIGGRKSKTPLD 336
>gi|251788023|ref|YP_003002744.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591]
gi|247536644|gb|ACT05265.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591]
Length = 345
Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + Q+ +E + + + A + P + DP+ Q
Sbjct: 16 LQQLADVITDPDELLRLLALDNHPQLTAGREARRLFPLRVPRAFAARMRPGDARDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ ++E P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTAQDEFIATPGFSHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ Q+ E+IF+GGDPL+ L +L L I H++ LR
Sbjct: 135 QDNQG--NKANWRQALDYIRQHPQLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI EL + L ++ V + H NH E E ++RL AG+ LL+
Sbjct: 193 IHTRLPVVIPARITAELCRRLAQSPLRVVLVTHINHANEIDTELADGMARLRQAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND+ LA L + I PYYLH D G +HF + ++ + +V L
Sbjct: 253 QSVLLRGVNDNANTLAALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDDARTLVRELMM 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 313 QVSGYLVPSLAREIGGEASKTLLD 336
>gi|168467049|ref|ZP_02700897.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|195630645|gb|EDX49257.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
Length = 342
Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNALTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|308189049|ref|YP_003933180.1| hypothetical protein Pvag_3613 [Pantoea vagans C9-1]
gi|308059559|gb|ADO11731.1| Uncharacterized kamA family protein [Pantoea vagans C9-1]
Length = 342
Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 169/324 (52%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + ++ E + +++ + + + +DP+ Q
Sbjct: 16 LQQLADVVTEPDELLRILALDQHTELAEGADARRLFALRVPHAFIRRMKKGDAHDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +++E P DP+ + + + + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTRRQEFIDAPGYSTDPLDEQS-NVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + +AAL YI + ++ E+IF+GGDPL+ L ++ L I H++ LR
Sbjct: 135 QDNPG--NKRSWQAALDYIADHPELDEIIFSGGDPLMAKDHELAWLIAALEKIPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI +L Q L E V + H NH E +E A+S L AG+ LL+
Sbjct: 193 IHSRLPVVIPARITDQLCQMLSETRLQVLMVTHINHAQEIDDELREAMSSLKRAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+GIND+ + LA L + I PYYLH D G +HF ++ EE +++V +L
Sbjct: 253 QSVLLRGINDNSQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARQLVRALLS 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 313 QVSGYLVPKLAREIGGEPSKTPLD 336
>gi|318607441|emb|CBY28939.1| lysine 2,3-aminomutase [Yersinia enterocolitica subsp. palearctica
Y11]
Length = 343
Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 164/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + + + + + + P NP+DP+ Q
Sbjct: 16 LQQLADVITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C + CR+CFRR
Sbjct: 76 VLTAREEFIAAPGFTNDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL Y+ + ++ E+IF+GGDPL+ L +L + I H++ LR
Sbjct: 135 QDNQG--NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLLDEIESISHIKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI EL Q L ++ V + H NH E ++++L AG+ LL+
Sbjct: 193 IHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDSMAQLKRAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+NDD E+LA L T + I PYY+H D G +HF + +E ++++ L
Sbjct: 253 QSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 313 RVSGYLVPRLAREIGGQPSKTPLD 336
>gi|224586177|ref|YP_002639976.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224470705|gb|ACN48535.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 342
Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G++LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVMLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|204926922|ref|ZP_03218124.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|204323587|gb|EDZ08782.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|322615499|gb|EFY12419.1| hypothetical protein SEEM315_10044 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618559|gb|EFY15448.1| hypothetical protein SEEM971_10303 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622028|gb|EFY18878.1| hypothetical protein SEEM973_17977 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627100|gb|EFY23892.1| hypothetical protein SEEM974_00362 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631059|gb|EFY27823.1| hypothetical protein SEEM201_05188 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637722|gb|EFY34423.1| hypothetical protein SEEM202_03729 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642386|gb|EFY38990.1| hypothetical protein SEEM954_03902 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645647|gb|EFY42172.1| hypothetical protein SEEM054_18690 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650513|gb|EFY46921.1| hypothetical protein SEEM675_15304 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653465|gb|EFY49795.1| hypothetical protein SEEM965_03844 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659708|gb|EFY55951.1| hypothetical protein SEEM19N_08219 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662081|gb|EFY58297.1| hypothetical protein SEEM801_16251 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322666170|gb|EFY62348.1| hypothetical protein SEEM507_03054 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672590|gb|EFY68701.1| hypothetical protein SEEM877_15409 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676020|gb|EFY72091.1| hypothetical protein SEEM867_14623 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680504|gb|EFY76542.1| hypothetical protein SEEM180_12388 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322684602|gb|EFY80606.1| hypothetical protein SEEM600_17732 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192917|gb|EFZ78143.1| hypothetical protein SEEM581_21258 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197207|gb|EFZ82347.1| hypothetical protein SEEM501_11096 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201676|gb|EFZ86740.1| hypothetical protein SEEM460_21711 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206190|gb|EFZ91152.1| hypothetical protein SEEM020_11145 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323213200|gb|EFZ98002.1| hypothetical protein SEEM6152_12673 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215572|gb|EGA00316.1| hypothetical protein SEEM0077_07868 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323219558|gb|EGA04043.1| hypothetical protein SEEM0047_21028 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323227861|gb|EGA12015.1| hypothetical protein SEEM0055_19496 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229030|gb|EGA13159.1| hypothetical protein SEEM0052_05250 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236358|gb|EGA20434.1| hypothetical protein SEEM3312_18736 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237522|gb|EGA21583.1| hypothetical protein SEEM5258_19717 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241812|gb|EGA25841.1| hypothetical protein SEEM1156_12637 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323248039|gb|EGA31976.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323254629|gb|EGA38440.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258311|gb|EGA41988.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259588|gb|EGA43222.1| hypothetical protein SEEM8284_10232 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265861|gb|EGA49357.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270305|gb|EGA53753.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 342
Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|28899620|ref|NP_799225.1| hypothetical protein VP2846 [Vibrio parahaemolyticus RIMD 2210633]
gi|260364033|ref|ZP_05776761.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030]
gi|260876639|ref|ZP_05888994.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034]
gi|260898079|ref|ZP_05906575.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466]
gi|260902332|ref|ZP_05910727.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037]
gi|28807872|dbj|BAC61109.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308085822|gb|EFO35517.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466]
gi|308093973|gb|EFO43668.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034]
gi|308110956|gb|EFO48496.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037]
gi|308114570|gb|EFO52110.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030]
Length = 340
Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats.
Identities = 97/322 (30%), Positives = 162/322 (50%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + DP+ + + + G++H+Y +R+L+ + C V CR+CFRR +
Sbjct: 78 PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + Y+ EK ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q LK + + + H NH E ++E A+ +L A + LL+Q
Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L+ L + I PYYLH D G +HF + E ++++A L E +
Sbjct: 255 VLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERARQLMAGLLENV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLIPTLTREIGGRKSKTPLD 336
>gi|304396296|ref|ZP_07378177.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB]
gi|304355805|gb|EFM20171.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB]
Length = 327
Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 168/324 (51%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
MQ +T +L + + ++ E + +++ + + + +DP+ Q
Sbjct: 1 MQQLADVVTEPDELLRILALDQHTELAEGADARRLFALRVPHAFIRRMKKGDAHDPLLLQ 60
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +++E P DP+ + + + + G++H+Y +R LL + C V CR+CFRR
Sbjct: 61 VLTRRQEFIDAPGYSTDPLDEQS-NVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 119
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + +AAL YI E ++ E+IF+GGDPL+ L ++ L I H++ LR
Sbjct: 120 QDNPG--NKRSWQAALDYIAEHPELDEIIFSGGDPLMAKDHELAWLIAALEQIPHLKRLR 177
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI +L Q L + V + H NH E E ++ RL AG+ LL+
Sbjct: 178 IHSRLPVVIPARITEQLCQMLSDTRLQVIMVTHINHAQEIDEALRESMIRLKRAGVTLLN 237
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+GIND+ + LA L + I PYYLH D G +HF ++ +E +++V SL
Sbjct: 238 QSVLLRGINDNAQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDDEARQLVRSLLS 297
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 298 QVSGYLVPKLAREIGGEPSKTPLD 321
>gi|62182782|ref|YP_219199.1| hypothetical protein SC4212 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62130415|gb|AAX68118.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322717283|gb|EFZ08854.1| Elongator protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 342
Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWRVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G++LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVMLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|16767582|ref|NP_463197.1| aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167994785|ref|ZP_02575876.1| KamA family protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168244887|ref|ZP_02669819.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194447368|ref|YP_002048381.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197248033|ref|YP_002149252.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197263424|ref|ZP_03163498.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|16422895|gb|AAL23156.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194405672|gb|ACF65891.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197211736|gb|ACH49133.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197241679|gb|EDY24299.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205327405|gb|EDZ14169.1| KamA family protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205336322|gb|EDZ23086.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261249429|emb|CBG27293.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996666|gb|ACY91551.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160825|emb|CBW20356.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915434|dbj|BAJ39408.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321223208|gb|EFX48278.1| Lysine 2,3-aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323132674|gb|ADX20104.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|332991147|gb|AEF10130.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 342
Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 170/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|254509350|ref|ZP_05121438.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16]
gi|219547715|gb|EED24752.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16]
Length = 340
Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 163/323 (50%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + + ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANGISDPAKLLEKLEIDPAKWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E + DP+ + + G++H+Y +R L+ + C V CR+CFRR
Sbjct: 77 LPLSQEFEVHEGYSNDPLQEQG-NETPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQ 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + +L YI+++S++ EVI +GGDPL+ + LQ ++ + I H++ +R
Sbjct: 136 ENKG--NKLVWQQSLDYIRQQSELNEVILSGGDPLMAKDEELQWLINHIADIPHIKRIRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI PEL+ L + V + H NH E + E A+ L AG+ LL+Q
Sbjct: 194 HSRLPVVIPARITPELLAILSGSRLQVIMVTHINHAQEINHELKRAMYDLKQAGVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
V+LKG+ND E L T + I PYY+H D G +HF ++ ++ + I+A L E+
Sbjct: 254 GVMLKGVNDCVEAQVALSETLFDAGILPYYMHVLDKVQGAAHFYISDQQAKAIMAGLLER 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRKSKTPLD 336
>gi|268323654|emb|CBH37242.1| hypothetical protein, radical SAM family [uncultured archaeon]
Length = 515
Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats.
Identities = 117/312 (37%), Positives = 175/312 (56%), Gaps = 9/312 (2%)
Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
+ +++ Y + + P +LI D I +Q +P EL DP+ ++ S
Sbjct: 29 EKDAAKVTRKYPMRINPYYLSLIKE--REDAIWKQSMPDIMELEDEE-GVPDPLHEDKDS 85
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
P+ G+VHRYPDR+LL + + C +YCRFC R+ VG + + + YI+E I
Sbjct: 86 PVSGLVHRYPDRVLLLVSNRCAMYCRFCTRKRKVG-DPFKRIKKEQVLQGIEYIREHEAI 144
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+V+ +GGDPL+L+ + L L+ L+ IKHV +LR +RVP PQRI L+ L+
Sbjct: 145 RDVLISGGDPLLLNDEELAFFLERLKEIKHVDVLRIGTRVPCALPQRITDGLLSLLRRY- 203
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
P+YI H NHP EF+EE+ A S +A+AGI L Q+VLLKG+ND +++ L+R +
Sbjct: 204 HPLYINTHFNHPGEFTEESRRACSMIADAGIPLGDQTVLLKGVNDSVDVMNALIRGLWSM 263
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
R+ PYY++ DL GT HFR ++EG +I LK S L P +++D PGG GK+ I
Sbjct: 264 RVTPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPHFVIDAPGGGGKIPITP 322
Query: 325 H---NIKKVGNG 333
+G
Sbjct: 323 ECRFYDVINEDG 334
Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
I L + P+YI +H HP E +E+ +S ++AG+ L + L++G+NDDP+++
Sbjct: 378 IYELLKQYHPIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPKVIKE 437
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L+ ++LR+KPYYLH + EEG I+ SL+ SG+ P I+
Sbjct: 438 LVHGLLKLRVKPYYLH-----------ADSEEEGLTIINSLRGFTSGMAVPHLIV----- 481
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
K+ I + I + + + ++ + +YP S
Sbjct: 482 GDKI-ICPNYIVEKTSEKIMLKNYQGMTFEYPNYS 515
>gi|320155059|ref|YP_004187438.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O]
gi|319930371|gb|ADV85235.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O]
Length = 340
Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 160/322 (49%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + NPNDP+ RQ +
Sbjct: 19 QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE I P DP+ + + + G++H+Y +R L+ + C + CR+CFRR
Sbjct: 78 PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPYQD 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L YI + S + EVIF+GGDPL+ LQ +++ + I H++ LR H
Sbjct: 137 NKG--SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q L++ V + H NH E + E + + RL G+ LL+Q
Sbjct: 195 SRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND E +L + + PYYLH D G +HF ++ +E + I+ L ++
Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGVLPYYLHVLDKVQGAAHFYVSDQEAKAIMRGLITQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPTLTREIGGRPSKTPLD 336
>gi|37681287|ref|NP_935896.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016]
gi|37200038|dbj|BAC95867.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016]
Length = 340
Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 160/322 (49%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + NPNDP+ RQ +
Sbjct: 19 QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE I P DP+ + + + G++H+Y +R L+ + C + CR+CFRR
Sbjct: 78 PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPYQD 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L YI + S + EVIF+GGDPL+ LQ +++ + I H++ LR H
Sbjct: 137 NKG--SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q L++ V + H NH E + E + + RL G+ LL+Q
Sbjct: 195 SRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND E +L + I PYYLH D G +HF ++ +E + I+ L ++
Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQEAKAIMRGLITQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPTLTREIGGRPSKTPLD 336
>gi|89092066|ref|ZP_01165021.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92]
gi|89083801|gb|EAR63018.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92]
Length = 337
Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats.
Identities = 104/321 (32%), Positives = 168/321 (52%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
L + + L + + +D ++ S+ +S+ + + I P NP DP+ RQ +
Sbjct: 18 HLLSNAIDDPKALLEHLNLPQNLLDGAQKGSDLFSMKVPEPYLSRIEPGNPKDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL + DP+ + + + G++H+Y R+LL L C + CR+CFRR +
Sbjct: 78 PLNDELADVSGFVADPLAEMDANHSDGLIHKYKGRVLLILSGACAINCRYCFRRHFPYQE 137
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L S+ + L Y++ I EVIF+GGDPL S RL+++++ L I H+ LR H
Sbjct: 138 N--RLGSEQWQQVLNYLKSDPTISEVIFSGGDPLATSDNRLERMIRDLEEIPHLSRLRIH 195
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+PIV PQR+ L+Q L+++ + +HANHP E + R+ ++ I +L+Q+
Sbjct: 196 SRLPIVIPQRVTDRLLQILRDSRFSTVMVLHANHPNELDGSTAESAKRMKDSHITVLNQA 255
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND ++L L E I PYYL D G +HF + EE K+ ++ +
Sbjct: 256 VLLKGINDQVDVLQQLSEKLFEQGILPYYLFTLDPVKGAAHFDIPDEEAVKLHQQMQAVL 315
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P ++PG K +
Sbjct: 316 PGYLVPKLAREIPGKTEKTLL 336
>gi|328472254|gb|EGF43124.1| lysine 2,3-aminomutase [Vibrio parahaemolyticus 10329]
Length = 340
Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats.
Identities = 97/322 (30%), Positives = 161/322 (50%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + DP+ + + + G++H+Y +R+L+ + C V CR+CFRR +
Sbjct: 78 PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + Y+ EK ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q LK + + + H NH E ++E A+ +L A + LL+Q
Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L L + I PYYLH D G +HF + E ++++A L E +
Sbjct: 255 VLLKGVNDSVDALIQLSEALFDAGIMPYYLHVLDKVQGAAHFMVDDERARQLMAGLLENV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLIPTLTREIGGRKSKTPLD 336
>gi|307132783|ref|YP_003884799.1| lysine 2,3-aminomutase [Dickeya dadantii 3937]
gi|306530312|gb|ADN00243.1| lysine 2,3-aminomutase [Dickeya dadantii 3937]
Length = 347
Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 166/324 (51%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + Q+ ++ + + + A + P + DP+ Q
Sbjct: 16 LQQLTDVITDPDELLRLLALDTHPQLSAGRDARKLFPLRVPRAFAARMRPGDARDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ ++E + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTAQDEFIVTPGFSHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI+++ Q+ E+IF+GGDPL+ L +L L I H++ LR
Sbjct: 135 QDNQG--NKANWRQALDYIRQQPQLDEIIFSGGDPLMAKDHELDWLLNELEQIPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI EL Q L ++ V + H NH E E +++RL AG+ LL+
Sbjct: 193 IHTRLPVVIPARITAELCQRLAQSSLRVVLVTHINHANEIDAEFTDSMARLRRAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND+ + LA L + I PYYLH D G +HF + +E + ++ L
Sbjct: 253 QSVLLRGVNDNADTLAALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDEARALIRELMT 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 313 QVSGYLVPSLTREIGGEASKTLLD 336
>gi|168263313|ref|ZP_02685286.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|205348035|gb|EDZ34666.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 342
Score = 334 bits (858), Expect = 9e-90, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLLAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|260770856|ref|ZP_05879785.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972]
gi|260614093|gb|EEX39283.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972]
Length = 340
Score = 334 bits (858), Expect = 9e-90, Method: Composition-based stats.
Identities = 93/323 (28%), Positives = 159/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + + ++ + + + NP DP+ RQ
Sbjct: 17 IQQLANGISDPAQLLQQLGIDPQPWQNGFDARKLFAQRVPQSFVDRMEKGNPYDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE ++ P EDP+ + N + + G++H+Y +R L+ + C + CR+CFRR +
Sbjct: 77 LPLSEEFDVHPGYSEDPLDEQN-NAVPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYA 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + ++ E+I +GGDPL+ + L +++ + I HV+ LR
Sbjct: 136 DNKG--SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERIGAISHVKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P R+ EL+ L V + H NH E + ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARVTDELVALLANTRLQVVLVTHINHANEINLALKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
V+LKG+ND L T + I PYY+H D G +HF ++ E + I++ L E+
Sbjct: 254 GVMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSEAKAIMSGLLER 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPTLTREIGGRKSKTPLD 336
>gi|238912798|ref|ZP_04656635.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
Length = 342
Score = 334 bits (858), Expect = 1e-89, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 170/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|260772045|ref|ZP_05880962.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14]
gi|260612912|gb|EEX38114.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14]
Length = 340
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 99/323 (30%), Positives = 157/323 (48%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ + L I + ++ + + NP+DP+ RQ
Sbjct: 17 LQQLANGISDPEQLLTQLAIDPSPWQSGFKARALFAQRVPQSFVERMEKGNPHDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E I P DP+ + N+S G++H+Y +R LL + C + CR+CFRR
Sbjct: 77 LPLSDEFIIHPGYSTDPLEEQNNS-TPGLLHKYRNRCLLIVKGGCAINCRYCFRRHFPYQ 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + +L YI + Q+ EVI +GGDPL+ L +++ + I H++ LR
Sbjct: 136 DNKG--NKLVWQQSLDYIAQHRQLNEVILSGGDPLMAKDHELGWLIEQIAAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL+ E V + H NH E + E ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARITDELVSLCAETRLQVILVTHINHANEINAELSQQLARLRAEKVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKG+ND L + I PYYLH D G +HF ++ E+ + I+A L E+
Sbjct: 254 SVLLKGVNDSVPAQVALSEALFDAGILPYYLHVLDKVQGAAHFYVSDEQARTIIAGLIEQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPKLTREIGGRPSKTPLD 336
>gi|45657183|ref|YP_001269.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600421|gb|AAS69906.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 429
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 109/355 (30%), Positives = 186/355 (52%), Gaps = 10/355 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + +L + + + I+ +++ TP +L +P +PN PI + +
Sbjct: 47 QLQNR-VKGF-ELERYFDLTESEKIGIENTI-RLNVSATPYYISLADPEDPNCPIRKMIL 103
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+++E PEE DP+ + SP+KG+ H YPDR+LL H C VYCR C R V
Sbjct: 104 PREDECIFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 163
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K +L+ +D E YI+ +I +V+ +GGDPL LS ++ +L+ L I+HV+I R
Sbjct: 164 KERMLT-EDLEICFDYIKSHPEITDVVLSGGDPLNLSDSKIDWILERLEKIEHVKICRLG 222
Query: 182 SRVPIVDPQRINPELIQCLKEA---GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+R P+ P R+ +L ++ ++ NH E + EA AI +L AG+ +
Sbjct: 223 TRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQFNHSKECTPEAKEAILKLLKAGVNVG 282
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q VLLK +ND + + L + +ELR++ YY++ P+L G+ FR + +G +I+ ++
Sbjct: 283 NQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIIEFMR 342
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTH-NIKKVGNGSYCITD--HHNIVHDYPPK 350
KI G+ P ++ DLPGG GK+ + + + + H P
Sbjct: 343 GKIGGMGIPQFVNDLPGGGGKITLTPNWYLGFYKPERIHVFKSALRGTYHFSPEP 397
>gi|242237917|ref|YP_002986098.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech703]
gi|242129974|gb|ACS84276.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech703]
Length = 348
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + E + + + A + P +P+DP+ +Q
Sbjct: 16 LQQLADVITDPGELLQLLALSDHPLLSQGHEARKLFPLRVPRAFAARMQPGDPDDPLLKQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
I K E + P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VITSKAEFLLTPGFTNDPLDEQ-RSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ S + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR
Sbjct: 135 QENQG--SKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDGLLTGLEEITHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L L ++ + + H NH E E + RL AG+ LL+
Sbjct: 193 IHSRLPVVIPARITEALSLRLAQSRLQILLVTHINHANEIDAELAQGLHRLRRAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND + LANL + + PYYLH D G +HF + ++ ++ +L
Sbjct: 253 QSVLLRGVNDSADELANLSHALFDAGVMPYYLHVLDKVQGAAHFLVPDDKATALIKTLMT 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P + ++ G K +D
Sbjct: 313 QVSGYLVPRLVREIGGEASKTPLD 336
>gi|59712946|ref|YP_205722.1| lysine aminomutase [Vibrio fischeri ES114]
gi|59481047|gb|AAW86834.1| predicted lysine aminomutase [Vibrio fischeri ES114]
Length = 340
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 163/317 (51%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+++ L + I ++ E +++ + + + NP DP+ RQ +P +E
Sbjct: 23 AISNPHQLLSTLGIDSAPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + G++H+Y +R+LL + C V CR+CFRR
Sbjct: 83 FEVHEGYSNDPL-EEQDNQQLGLLHKYKNRVLLIVKGGCAVNCRYCFRRHFPYQDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + ++ YI +I EVIF+GGDPL+ LQ ++ + I H++ LR HSR+P+
Sbjct: 140 SKTIWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIDHIEAIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q + + + H NH E ++E I+++ +L A + LL+QSVLLKG
Sbjct: 200 VIPNRITDTLCQLFTKTRLQIILVTHINHANEINQELISSMHKLKLAHVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + L L + I PYYLH D G +HF ++ E+ +++++ L E +SG
Sbjct: 260 VNDNADTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDEKAKQLMSELIENVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PTLAREIGGRKSKTPLD 336
>gi|24215400|ref|NP_712881.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
gi|24196517|gb|AAN49899.1|AE011436_14 L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
Length = 416
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 109/355 (30%), Positives = 186/355 (52%), Gaps = 10/355 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + +L + + + I+ +++ TP +L +P +PN PI + +
Sbjct: 34 QLQNR-VKGF-ELERYFDLTESEKIGIENTI-RLNVSATPYYISLADPEDPNCPIRKMIL 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+++E PEE DP+ + SP+KG+ H YPDR+LL H C VYCR C R V
Sbjct: 91 PREDECIFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 150
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K +L+ +D E YI+ +I +V+ +GGDPL LS ++ +L+ L I+HV+I R
Sbjct: 151 KERMLT-EDLEICFDYIKSHPEITDVVLSGGDPLNLSDSKIDWILERLEKIEHVKICRLG 209
Query: 182 SRVPIVDPQRINPELIQCLKEA---GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+R P+ P R+ +L ++ ++ NH E + EA AI +L AG+ +
Sbjct: 210 TRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQFNHSKECTPEAKEAILKLLKAGVNVG 269
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q VLLK +ND + + L + +ELR++ YY++ P+L G+ FR + +G +I+ ++
Sbjct: 270 NQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIIEFMR 329
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTH-NIKKVGNGSYCITD--HHNIVHDYPPK 350
KI G+ P ++ DLPGG GK+ + + + + H P
Sbjct: 330 GKIGGMGIPQFVNDLPGGGGKITLTPNWYLGFYKPERIHVFKSALRGTYHFSPEP 384
>gi|330444985|ref|ZP_08308639.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328493103|dbj|GAA03136.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 340
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 156/317 (49%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L I + +++ + + + NP DP+ RQ +P +E
Sbjct: 23 AISDPFTLLKLLKIDPTPWENGLAARKLFALRVPLSFVDKMEIGNPYDPLLRQILPLAQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R+LL + C V CR+CFRR S
Sbjct: 83 FEVHQGYSVDPL-EEQQNEIPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + +L YI +I EVI +GGDPL+ LQ +++ + I H++ LR HSR+P+
Sbjct: 140 NKRQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLIEHIAAIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L E + H NH E + A+ +L A + LL+Q VLLKG
Sbjct: 200 VIPNRITDALCQILTETRLQTILVTHINHANEIDDALKTAMQKLKQANVTLLNQGVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND L +L T + I+PYYLH D G +HF + E ++++A L K+SG
Sbjct: 260 VNDSVAALTDLSETLFDAGIQPYYLHVLDRVQGAAHFMVDDEIARQLMAGLITKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLTREIGGRASKTPLD 336
>gi|190575198|ref|YP_001973043.1| putative methylase protein [Stenotrophomonas maltophilia K279a]
gi|190013120|emb|CAQ46752.1| putative methylase protein [Stenotrophomonas maltophilia K279a]
Length = 346
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 101/321 (31%), Positives = 157/321 (48%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + L Q L + + + +++ + + +P DP+ RQ +
Sbjct: 28 QLWRQALRDPQALLARLQLDPAALGVSEAAMAQFALRVPEGFVARMRKGDPADPLLRQVL 87
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE+ P D +GD G++ +Y R LL C + CR+CFRR
Sbjct: 88 PIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DY 145
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EVI +GGDPL L+ +L ++ LR I H++ LR H
Sbjct: 146 GAENAAKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDALRAIPHIRRLRIH 205
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+R++ EL+ L P+ I +HANH EF AA++RL G LL+Q+
Sbjct: 206 TRLPIVLPERVDDELVSWLGSLPWPLAIVVHANHANEFDASVDAAMARLRGIGAQLLNQA 265
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + L +L + PYYLH D G +HF + + ++A L ++
Sbjct: 266 VLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTRAKALIAGLTARL 325
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + +LPG K +
Sbjct: 326 SGYLVPKLVRELPGDPSKRPV 346
>gi|319782550|ref|YP_004142026.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317168438|gb|ADV11976.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 370
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 131/341 (38%), Positives = 191/341 (56%), Gaps = 4/341 (1%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ +DL + + + + + ++ + +LI+ ++P DPI Q IP +EL
Sbjct: 27 VRHVRDL-DRLPLSSAERAAAQAAAANHKVRAPKAYLDLIDWNDPADPIRAQVIPSPQEL 85
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
E +DPI D++ SP+ + HR+ DR+LL + C VYCRFCFR+E + + G +
Sbjct: 86 EEAEGELDDPIADHDFSPVPRLTHRHADRVLLFPTYQCAVYCRFCFRKESL-TSIGRGYT 144
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ E ALAYI + +I EVI TGGDPL L K L ++ + I HV++LR H+RVP+
Sbjct: 145 REALEPALAYIADHPEIREVILTGGDPLSLPEKALAEIRARIEAIAHVRLLRIHTRVPVA 204
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI P L+ L+ V I H NH E ++ A L AG +LL+QSVLLKG+
Sbjct: 205 LPSRITPGLVAALQG-RLMVTIVTHFNHAREITQATETACRTLRQAGFVLLNQSVLLKGV 263
Query: 248 NDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
ND E L L R L +KPYYLHH DLA G +H R TI +GQ + +L+ ++SG+C
Sbjct: 264 NDSVEALEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALAEALRARLSGICN 323
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LDLP G GKV I +++ ++ + V Y
Sbjct: 324 PVYVLDLPEGGGKVPIGPCHVEGRDGENWRLRGLDGEVRAY 364
>gi|153838020|ref|ZP_01990687.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810]
gi|149748628|gb|EDM59487.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810]
Length = 340
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 161/322 (50%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + DP+ + + + G++H+Y +R+L+ + C V CR+CFRR +
Sbjct: 78 PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + Y+ EK ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q LK + + + H NH E ++E A+ +L A + LL+Q
Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L+ L + I PYYLH D G +HF + E ++++ L E +
Sbjct: 255 VLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERARQLMVGLLENV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLIPTLTREIGGRKSKTPLD 336
>gi|163802718|ref|ZP_02196608.1| chaperonin GroEL [Vibrio sp. AND4]
gi|159173425|gb|EDP58247.1| chaperonin GroEL [Vibrio sp. AND4]
Length = 340
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 88/324 (27%), Positives = 160/324 (49%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ + L I + +S+ + + NP+DP+ RQ +
Sbjct: 19 QLSN-AISDPRKLLEVLEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + + G++H+Y +R L+ + C + CR+CF R
Sbjct: 78 PLSEEFEVHQGYSADPLDEQG-NAIPGLLHKYKNRALMIVKGGCAINCRYCFSRHFPYQD 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L Y+ + +I EVI +GGDPL+ ++ +++ + +I H++ LR H
Sbjct: 137 NKG--SKSVWQTSLDYVSQHPEINEVILSGGDPLMAKDSEIEWLIQAIEHIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI +L L+ + + + H NH E + E A +++L G+ LL+Q+
Sbjct: 195 SRLPVVIPARITDQLSHLLQASRLQIVLVTHINHADEINAELTAKMAKLKQVGVTLLNQA 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +ND E L + I PYYLH D G +H+ ++ + ++I+ + ++
Sbjct: 255 VLLKDVNDSVEAQVTLNEALFDAGILPYYLHVLDKVQGAAHYFVSDTQAKEIMRGVITRV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D +
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLN 338
>gi|315178899|gb|ADT85813.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
Length = 340
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 92/323 (28%), Positives = 159/323 (49%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + + ++ + + + NP DP+ RQ
Sbjct: 17 IQQLANGISDPAQLLQQLGIDPQPWQNGFDARKLFAQRVPQSFIDRMEKGNPYDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE ++ P EDP+ + N + + G++H+Y +R L+ + C + CR+CFRR +
Sbjct: 77 LPLSEEFDVHPGYSEDPLDEQN-NAVPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYA 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + +L YI + ++ E+I +GGDPL+ + L +++ + I H++ LR
Sbjct: 136 DNKG--SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERIGAISHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P R+ EL+ L V + H NH E + ++RL + LL+Q
Sbjct: 194 HSRLPVVIPARVTDELVALLANTHLQVVLVTHINHANEINLALKQQMARLRAVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
V+LKG+ND L T + I PYY+H D G +HF ++ E + I++ L E+
Sbjct: 254 GVMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSEAKAIMSGLLER 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPTLTREIGGRKSKTPLD 336
>gi|56416128|ref|YP_153203.1| hypothetical protein SPA4150 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197365054|ref|YP_002144691.1| hypothetical protein SSPA3854 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56130385|gb|AAV79891.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096531|emb|CAR62140.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 342
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAVHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLHHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|109896769|ref|YP_660024.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
atlantica T6c]
gi|109699050|gb|ABG38970.1| L-lysine 2,3-aminomutase [Pseudoalteromonas atlantica T6c]
Length = 341
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 90/319 (28%), Positives = 150/319 (47%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ L + + + + + + A I +PND + +Q P ++E
Sbjct: 23 AFSDPVALLKYLDLDPTEFIDDIAARRLFPMRVPLPFAARIKKGDPNDALFKQVFPSEKE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
DP+ + + G++H+Y R+LL + C V CR+CFRR S L
Sbjct: 83 FLTDLNYVLDPLQEQQNEK-PGVLHKYKSRVLLLVRGGCAVNCRYCFRRHFPYSDN--HL 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + L YI++ I EVI++GGDPL+ L + + I H++ +R H+R+P+
Sbjct: 140 NKHEWQETLDYIKQDKNINEVIYSGGDPLMAKDDFLAWLTDEIAEITHIKRIRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI P+LI+ + + +H NHP E + L AG+ LL+Q VLLK
Sbjct: 200 VIPARITPQLIEWFTKTRLKPVMVLHINHPQEIDFALQEVLQELTKAGVTLLNQGVLLKD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND ++ L + + PYYLH D G HF + + I+A + +++ G
Sbjct: 260 INDSADVQVALSERLFDAGVMPYYLHVMDKVQGAQHFDQDDKIAKDIMAKMIKRLPGFLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P + ++ G GK ID +
Sbjct: 320 PKLVREIGGQPGKTPIDLN 338
>gi|238918348|ref|YP_002931862.1| hypothetical protein NT01EI_0386 [Edwardsiella ictaluri 93-146]
gi|238867916|gb|ACR67627.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 342
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 102/324 (31%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T DL + Q E + + + + I +PNDP+ RQ
Sbjct: 16 LQQLADVVTDPADLLAQLGLSDHPQWLAGCEARRLFPLRVPHAFISRIRRGDPNDPLLRQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ E P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VMSDAAEFIETPGFSTDPLAEQ-HSVVPGLLHKYQNRALLLVKGSCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + + A+AY+ E ++ E+IF+GGDPL+ L + L + H++ LR
Sbjct: 135 QENQG--TRANWQRAVAYLCEHPELDEIIFSGGDPLMAKDHELDWLFTQLEQLPHLRRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P R+ L Q + ++ + + H NH E E A+ RL AG+ LL+
Sbjct: 193 IHSRLPVVIPARVTDALCQRMADSRLQMILVTHINHANEIDEALSEAMERLKQAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+GIND+ + LA L E I PYYLH D G +HF + +E ++++ L
Sbjct: 253 QSVLLRGINDNADTLAALSNALFEAGILPYYLHVLDKVQGGAHFMVPDDEARRLMNGLLS 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 313 RVSGYLVPRLTREIGGEPSKTPLD 336
>gi|161505162|ref|YP_001572274.1| hypothetical protein SARI_03299 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160866509|gb|ABX23132.1| hypothetical protein SARI_03299 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 342
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 172/317 (54%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ E++ ++ + +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEANEKLRAGQDARHLFALRVPRAFIARMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+P+
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L G+ LL+QSVLL+G
Sbjct: 200 VIPARITNELVARFDQSRLQILLVNHTNHANEVDEAFCLAMKKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNAKTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMITDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|317046674|ref|YP_004114322.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b]
gi|316948291|gb|ADU67766.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b]
Length = 342
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + ++ E E +++ + + + DP+ Q
Sbjct: 16 LQQLADVVTDPAELLQLLALDRHAELAEGTEARRLFALRVPRAFIQRMKIGDAQDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ ++E N P DP+ + + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTSRQEFNDAPGYSTDPLDEQS-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ ++ +AA+ YI + ++ E+IF+GGDPL+ L +++ L + H++ LR
Sbjct: 135 QDNQG--NKRNWQAAIDYIADHPELDEIIFSGGDPLMAKDHELAWLIEALEKLPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L Q L V + H NH E +E + L AG+ LL+
Sbjct: 193 IHSRLPVVIPARITEGLCQLLANTRLQVLLVSHINHAQEIDDELRYGMQMLKRAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND + LA+L + I PYYLH D G +HF + +E + +V L
Sbjct: 253 QSVLLRGVNDKAQQLADLSNALFDAGILPYYLHVLDKVQGAAHFFVPDDEARALVRELLT 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 313 MVSGYMVPKLAREIGGEPSKTPLD 336
>gi|327396208|dbj|BAK13630.1| lysine 2 3-aminomutase YjeK [Pantoea ananatis AJ13355]
Length = 342
Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 160/324 (49%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + +++ + + + DP+ Q
Sbjct: 16 LQQLADVVTDPHELLQLLALDHHPDLAAGGDARRLFALRVPRAFIRRMKKGDAQDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ ++E P DP+ + N S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTSRQEFVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ ++ +AAL YI ++ E+IF+GGDPL+ L ++ L I H++ LR
Sbjct: 135 QDNQG--NKRNWQAALDYIAAHPELDEIIFSGGDPLMAKDHELAWLIDALGAIPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L Q L E V + H NH E E A+ RL A + LL+
Sbjct: 193 IHSRLPVVIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLRLKRADVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+NDD + LA L + I PYYLH D G +HF ++ EE + ++ SL
Sbjct: 253 QSVLLRGVNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARALMRSLLP 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 313 RVSGYLVPKLAREIGGEPSKTPLD 336
>gi|269137690|ref|YP_003294390.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202]
gi|267983351|gb|ACY83180.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202]
gi|304557746|gb|ADM40410.1| hypothetical protein ETAF_0286 [Edwardsiella tarda FL6-60]
Length = 342
Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T DL + Q E + + + + I +PNDP+ RQ
Sbjct: 16 LQQLADVVTDPADLLAQLGLSDHPQWLAGCEARRLFPLRVPRAFISRIRRGDPNDPLLRQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ E P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VMSDAAEFIETPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + + A+AY+ E ++ E+IF+GGDPL+ L + L + H++ LR
Sbjct: 135 QENQG--TRANWQRAVAYLHEHPELDEIIFSGGDPLMAKDHELDWLFTQLEQLPHLRRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P R+ L Q + ++ + + H NH E E A+ RL AG+ LL+
Sbjct: 193 IHSRLPVVIPARVTDALCQRMADSRLQMVLVTHINHANEIDEALSEAMGRLKQAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND + LA L + I PYYLH D G +HF + +E ++++ L
Sbjct: 253 QSVLLRGVNDSADTLAALSNALFDAGILPYYLHVLDKVQGGAHFMVPDDEARRLMHGLLA 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K ++D
Sbjct: 313 QVSGYLVPRLTREIGGEPSKTQLD 336
>gi|149192243|ref|ZP_01870457.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1]
gi|148833916|gb|EDL50939.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1]
Length = 340
Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ +L I + + + + + + NP DP+ RQ +
Sbjct: 19 QLSN-AISDPYELLKQLEIDATPWENGLTARRLFPMRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + EDP+ + + + G++H+Y +R LL + C V CR+CFRR
Sbjct: 78 PLSQEFEVHNGYSEDPL-EEQDAAVPGLLHKYHNRALLIVKGGCAVNCRYCFRRHFPYED 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + AL YI +I E+I +GGDPL+ L +++ I H++ LR H
Sbjct: 137 NKG--GKANWQVALDYIAAHPEIDEIILSGGDPLMAKDSELAWLVQKAESIHHLKTLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+RI EL Q LK+ + H NH E + E A+++R+ N G LL+Q
Sbjct: 195 SRLPVVIPKRITEELCQLLKQTRLNTILVTHINHANEVNSEFSASMARIKNTGTTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L + I PYYLH D G +HF ++ ++ + I+ L +++
Sbjct: 255 VLLKGVNDSVDAQFELSHALFSVGILPYYLHVLDKVQGAAHFFISDDDAKAIIQGLIKRV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P + G K +D
Sbjct: 315 SGYLVPKLTREEGGRASKTPLD 336
>gi|300724424|ref|YP_003713744.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061]
gi|297630961|emb|CBJ91641.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061]
Length = 342
Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 160/317 (50%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + E + + + A + +P DP+ Q + +EE
Sbjct: 23 ITDPDELLHLLSLNTHSILKEGHGAKRLFPLRVPRSFAARMKKGDPRDPLLLQVLTAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P+ DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FAVTPDFSTDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYEDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YI + +I E+IF+GGDPL+ L ++ + I HV+ LR H+R+P+
Sbjct: 140 NKNNWQLALDYIGQHPEIDEIIFSGGDPLMAKDHELDWLISRIESIPHVKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RI L L ++ V + H NH E E +++RL AG+ LL+QSV L+
Sbjct: 200 VIPERITLALCNRLAQSHLQVIMVTHINHANEIDNEFRGSMTRLKQAGVTLLNQSVFLRD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ E LA+L + I PYY+H D G +HF + EE + I+ L K+SG
Sbjct: 260 INDNAETLADLSNVLFDTGILPYYIHVLDKVQGAAHFLVNDEEAKIIMRELLSKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLTREIGGEPSKTPLD 336
>gi|95930510|ref|ZP_01313245.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95133345|gb|EAT15009.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 365
Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 106/355 (29%), Positives = 179/355 (50%), Gaps = 14/355 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + + + + L + ++ +++ TP A+L++ +P PI +Q I
Sbjct: 15 QLANF-VNTIERLEQYVNLTDDERQILEQNKTT--WGTTPYFASLMDADDPQCPIRKQVI 71
Query: 62 PQKEELNILPEEREDPIGDNN----HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
P E + + N I +Y DR+ + C +YCR CFR+E+
Sbjct: 72 PSSLEQQNTYGMDDYLMWKENRDTEEQRPDSIARQYKDRVAFTVTQTCGIYCRHCFRKEL 131
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V T + + L +I + ++ +V+ TGGDPL+L +++ +++ LR I H+Q+
Sbjct: 132 VVDGDLTF--DFNVDDGLEWISQHPEVRDVLITGGDPLLLPDEKIAYLIERLRAIPHIQM 189
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGII 236
+RF SRVPIV PQRI PEL L K P+++ NHP E +E A+ L G+
Sbjct: 190 IRFGSRVPIVLPQRITPELKNILGGNHKVPIWLNTQCNHPKELTEHTAQAVYDLMTCGVN 249
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA- 295
+ +Q+VLLKGINDD E L + + +RI+PYY+ + + A G HFR +E+G +++
Sbjct: 250 VGNQAVLLKGINDDVETFRELHQKLLRVRIRPYYVFYCEAAPGIDHFRTPVEKGAELIRD 309
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTH-NIKKVGNGSYCITDHHNIVHDYPP 349
+L+ +GL QP Y++ GK+ + I + Y + +H + P
Sbjct: 310 ALRGHTTGLAQPMYVV--ATNIGKIPLMPDYYIVDKDDEQYTLRNHKGQITHLPN 362
>gi|261345001|ref|ZP_05972645.1| KamA family protein [Providencia rustigianii DSM 4541]
gi|282567147|gb|EFB72682.1| KamA family protein [Providencia rustigianii DSM 4541]
Length = 342
Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 97/326 (29%), Positives = 165/326 (50%), Gaps = 4/326 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q + +T+ +L ++ E E + + + + + +P+DP+ Q
Sbjct: 16 IQQLAEAVTNPDELLQILNLEDHLPSREGNEARKLFPLRVPRPFISRMKKGDPSDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ K E +I P DP+ + + + ++H+Y +R L+ + C V CR+CFRR
Sbjct: 76 VLTAKTEFDIHPGFSTDPL-EEQDNEIPSLLHKYHNRALMLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + A+ YI+ S++ E+IF+GGDPL+ L ++ L I H+ LR
Sbjct: 135 EDNKG--NKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQLEDIPHITRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P+RI L + L+++ V + H NH E + A+ +L AG+ LL+
Sbjct: 193 IHSRLPVVIPERITNTLCKRLEQSRLHVIMVTHVNHANEIDDSFTHAMQKLKRAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+ +ND+ LANL E I PYYLH D G +HF ++ E ++++ L
Sbjct: 253 QSVLLRQVNDNVTALANLSNALFEAGILPYYLHVLDKVQGAAHFLVSDNEARELIRELLS 312
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
K+SG P ++ G K +D +
Sbjct: 313 KVSGYLVPKLAREIGGEPSKTLLDLN 338
>gi|27364664|ref|NP_760192.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6]
gi|27360809|gb|AAO09719.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6]
Length = 340
Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 159/322 (49%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + NPNDP+ RQ +
Sbjct: 19 QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE I P DP+ + + + G++H+Y +R L+ + C + CR+CFRR
Sbjct: 78 PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPYQD 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L YI + S + EVIF+GGDPL+ LQ +++ + I H++ LR H
Sbjct: 137 NKG--SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI L Q L++ V + H NH E + E + + RL G+ LL+Q
Sbjct: 195 SRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND E +L + I PYYLH D G +HF ++ +E + I+ L ++
Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQEAKAIMHGLITQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPTLTREIGGRPSKTPLD 336
>gi|90581266|ref|ZP_01237063.1| hypothetical protein VAS14_18921 [Vibrio angustum S14]
gi|90437505|gb|EAS62699.1| hypothetical protein VAS14_18921 [Vibrio angustum S14]
Length = 340
Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 158/317 (49%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L I + +++ + + + NP+DP+ RQ +P ++E
Sbjct: 23 AISDPFQLLKLLKIDPTPWENGLAARKLFALRVPLSFVDKMEIGNPHDPLLRQILPLEQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R+LL + C V CR+CFRR S
Sbjct: 83 FEVHQGYSVDPL-EEQQNDIPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + +LAYI +I EVI +GGDPL+ LQ +++ + I H++ LR HSR+P+
Sbjct: 140 NKHQWQQSLAYIAAHPEINEVILSGGDPLMAKDHELQWLVEHIAAIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L E + H NH E + A+ +L A + LL+Q VLLKG
Sbjct: 200 VIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMQKLKQANVTLLNQGVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND + L +L + I+PYYLH D G +H+ + E ++++A L ++SG
Sbjct: 260 INDSVKTLTDLSEALFDAGIQPYYLHVLDRVQGAAHYMVDDETARQLMAGLITQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLTREIGGRASKTPLD 336
>gi|120555694|ref|YP_960045.1| lysine 2,3-aminomutase YodO family protein [Marinobacter aquaeolei
VT8]
gi|120325543|gb|ABM19858.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8]
Length = 355
Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats.
Identities = 102/323 (31%), Positives = 161/323 (49%), Gaps = 3/323 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNPNDPIARQF 60
Q+ +++T+ + L + E + + I + I NP+DP+ RQ
Sbjct: 32 QILSQSVTTPEQLLERLGLAPEDWFRGAACGHRLFPIRVPEPYLARIEQGNPDDPLLRQV 91
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E I P+ DP+ + + G++ +Y R LL + C + CR+CFRR
Sbjct: 92 LPVAQEAEIHPDFVSDPLEEASAIQTTGLIRKYTSRALLMITGQCAINCRYCFRRHFPYG 151
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
L +D + + +I EVIF+GGDPL ++ + L + + L I H++ LR
Sbjct: 152 DH--RLGPEDRRQVIDSLSASPEINEVIFSGGDPLAVNDRLLSQWAELLGDIPHLRRLRI 209
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V PQR+ LI L + +H NHP E + A RL+ AG+ LL+Q
Sbjct: 210 HSRLPVVIPQRVCDSLIDWLSRTRLQKVLVVHVNHPAEIDQATRQAFRRLSEAGVTLLNQ 269
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SV+LKG+ND L+ L T E + PYYLH D +G HF ++ + +IV + E
Sbjct: 270 SVILKGVNDSSATLSALSETLFEAGVMPYYLHAFDPVSGARHFSVSDTDAIRIVNEMLEN 329
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+ G P + +LPG K +D
Sbjct: 330 LPGFLVPKLVRELPGRASKTPLD 352
>gi|225175029|ref|ZP_03729026.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
gi|225169669|gb|EEG78466.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
Length = 371
Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats.
Identities = 108/355 (30%), Positives = 183/355 (51%), Gaps = 14/355 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ + + + L + +E+ D I+ TP +L++ NP PI RQ I
Sbjct: 7 QMQNQ-VNTLEKLEEYIKVTEEEADAIRNCET--RWGTTPYFVSLMDKENPECPIRRQVI 63
Query: 62 PQKEELNIL---PEEREDPIGDNNHSPLK-GIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
P K E +NH I +Y DRI + + + C +YCR CFR+E+
Sbjct: 64 PSKHENVNEFGIENYLVYKENRDNHEQRPDTIARQYKDRIAMTITNHCGIYCRHCFRKEL 123
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V + + D + L ++++ ++ EV+ TGGDP +L +++ +++ LR + H+++
Sbjct: 124 VVDKSMQL--RFDVDEGLEWVRQHPELREVLITGGDPFLLPDDQIEYIIRKLREVPHIEM 181
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGII 236
+RF SR+PIV PQRI P L + L + K P+++ NH E +E AI L G+
Sbjct: 182 IRFGSRLPIVLPQRITPGLKKVLGQYHKVPIWVNTQCNHAKEITERTAQAIWDLLTCGVN 241
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ +Q+VL+KGINDD L + + +RI+PYY+ + + A G HFR +E+G +++
Sbjct: 242 VGNQAVLMKGINDDEHSFQQLHQKLLSIRIRPYYVFYLEPAPGIDHFRTPVEKGAELIRD 301
Query: 297 -LKEKISGLCQPFYILDLPGGYGKVKIDTH-NIKKVGNGSYCITDHHNIVHDYPP 349
L+ SGL QP Y+ + GKV + IK+ Y + +H P
Sbjct: 302 TLRGHTSGLAQPMYV--IATNIGKVPLMPDYYIKEKNEKEYILQNHRGETTTLPN 354
>gi|268323533|emb|CBH37121.1| putative L-lysine 2,3-aminomutase [uncultured archaeon]
Length = 515
Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats.
Identities = 116/301 (38%), Positives = 174/301 (57%), Gaps = 6/301 (1%)
Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
+ +++ Y + + P +LI D I +Q +P EL DP+ + S
Sbjct: 29 EKDAAKVTRKYPMRINPYYLSLIKE--REDAIWKQSMPDIMELEDEE-GVPDPLHEEKDS 85
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
P+ G+VHRYPDR+LL + + C +YCRFC R+ VG + + + YI+E+ +I
Sbjct: 86 PVSGLVHRYPDRVLLLVSNRCAMYCRFCTRKRRVG-DPFKRIKKEQVLQGIEYIREREEI 144
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+V+ +GGDPL+L+ L L+ L+ IKHV++LR +RVP PQRI L+ L+
Sbjct: 145 RDVLISGGDPLLLNDDELAFFLERLKKIKHVEVLRIGTRVPCALPQRITDALLSLLRRY- 203
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
P+YI H NHP EF+EE+ A S +A+AGI L Q+VLLKG+ND +++ L+R +
Sbjct: 204 HPLYINTHFNHPGEFTEESRKACSMIADAGIPLGDQTVLLKGVNDSVDVMNALIRGLWSM 263
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
R+ PYY++ DL GT HFR ++EG +I LK S L P +++D PGG GK+ I
Sbjct: 264 RVTPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPHFVIDAPGGGGKIPITP 322
Query: 325 H 325
Sbjct: 323 E 323
Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
I L + P+YI +H HP E +E+ +S ++AG+ L + L++G+NDDP ++
Sbjct: 378 IYELLKQYHPIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPRVIKE 437
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L+ ++LR+KPYYLH + EEG I+ SL+ SG+ P I+
Sbjct: 438 LVHGLLKLRVKPYYLH-----------ADSEEEGLTIINSLRGFTSGMAVPHLIV----- 481
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
K+ I ++I + + + ++ + +YP S
Sbjct: 482 GDKI-ICPNHIVEKTSEKIMLKNYQGMTFEYPNYS 515
>gi|291615956|ref|YP_003518698.1| YjeK [Pantoea ananatis LMG 20103]
gi|291150986|gb|ADD75570.1| YjeK [Pantoea ananatis LMG 20103]
Length = 342
Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 160/324 (49%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + +++ + + + DP+ Q
Sbjct: 16 LQQLADVVTDPHELLQLLALDHHPDLAAGGDARRLFALRVPRAFIRRMKKGDAQDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ ++E P DP+ + N S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTSRQEFVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ ++ +AAL YI ++ E+IF+GGDPL+ L ++ L I H++ LR
Sbjct: 135 QDNQG--NKRNWQAALDYITAHPELDEIIFSGGDPLMAKDHELAWLIDALGAIPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L Q L E V + H NH E E A+ RL A + LL+
Sbjct: 193 IHSRLPVVIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLRLKRADVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+NDD + LA L + I PYYLH D G +HF ++ EE + ++ SL
Sbjct: 253 QSVLLRGVNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARALMRSLLP 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 313 RVSGYLVPKLAREIGGEPSKTPLD 336
>gi|325107258|ref|YP_004268326.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
gi|324967526|gb|ADY58304.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
Length = 346
Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 168/321 (52%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + +L + + + + SN + + + N + P P+DP+ RQ +
Sbjct: 28 QQLSRAIRDPAELLERLQLPADLLPAARSASNDFPLLVPESFLNRMQPGEPDDPLLRQIL 87
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ++EL D +GD+ G++ +Y R L+ L C V+CR+CFRR
Sbjct: 88 PVEQELQPKQGFTTDAVGDDAARIAPGLLQKYHGRALMITLGTCAVHCRYCFRRHYPY-- 145
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + + L I ++ + E++ +GGDPL+L+ +RL +++ L I H+Q LR H
Sbjct: 146 HDEPRSREQWQETLNVIADRPDLEEILLSGGDPLVLNDRRLGELIDDLAKIPHLQRLRIH 205
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P R+ + + L++ + +HANHP E + A++ RL+ AG +L+Q+
Sbjct: 206 TRLPIVLPDRVTEQFLSLLQDTRLQPVVVVHANHPAEVVADCAASLKRLSRAGFPVLNQA 265
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + A L R + + PYYLH D G +HF G+ IV +LKE++
Sbjct: 266 VLLRGVNDTVDTQAELCRRLINAGVLPYYLHQLDRIQGAAHFETDAALGKAIVQALKERL 325
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P ++ ++ G K ++
Sbjct: 326 PGYAVPRFVREIAGEPSKTEM 346
>gi|88812696|ref|ZP_01127943.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231]
gi|88790112|gb|EAR21232.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231]
Length = 339
Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats.
Identities = 94/323 (29%), Positives = 163/323 (50%), Gaps = 2/323 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + +L + ++ + + + + + + N DP+ RQ +
Sbjct: 19 QELARAVRDPAELLRLLELPATLLEPARRAARLFPLRVPRSYLARMERGNLEDPLLRQVL 78
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL+ P DP+GD S G++H+Y R+LL C + CR+CFRR +Q
Sbjct: 79 PLTAELDPAPGFVTDPVGDLGASKGAGVLHKYHGRVLLITTGACAINCRYCFRRHFPYAQ 138
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+AL YI +++++ EVI +GGDPL L+ +RL +++ L I H++ LR H
Sbjct: 139 ANAAAG--QWHSALRYIAQRTEVEEVILSGGDPLTLADRRLAQLVTQLVDIPHIRRLRIH 196
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+P+V P R+ EL++ + + +H NH E +A+ RL AG+ +L+Q+
Sbjct: 197 TRLPVVLPARVTDELVEWFAGSRLQPIMVLHTNHANELDATVTSAVKRLREAGVTMLNQT 256
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND+ L L + + I PYYLH D AG HF +T + +++ + ++
Sbjct: 257 VLLRGVNDEAMALTALHQRLFDSGILPYYLHLLDRVAGARHFAITQDRARELHRQMARRL 316
Query: 302 SGLCQPFYILDLPGGYGKVKIDT 324
G P + ++ G GK +
Sbjct: 317 PGYLVPRLVQEIEGAPGKHWLPP 339
>gi|145636539|ref|ZP_01792207.1| thiamin transporter membrane protein [Haemophilus influenzae
PittHH]
gi|145270364|gb|EDK10299.1| thiamin transporter membrane protein [Haemophilus influenzae
PittHH]
Length = 338
Score = 331 bits (850), Expect = 8e-89, Method: Composition-based stats.
Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|268590834|ref|ZP_06125055.1| KamA family protein [Providencia rettgeri DSM 1131]
gi|291313616|gb|EFE54069.1| KamA family protein [Providencia rettgeri DSM 1131]
Length = 342
Score = 331 bits (850), Expect = 9e-89, Method: Composition-based stats.
Identities = 95/326 (29%), Positives = 163/326 (50%), Gaps = 4/326 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q + +T+ +L ++ + E E + + + + + +P DP+ Q
Sbjct: 16 IQQLAEAITNPDELLQILNLENHLLSKEGSEARKLFPLRVPMPFISRMKKGDPLDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ K E +I P DP+ + + + ++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VLTAKAEFDIHPGFSTDPL-EEQDNEIPSLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + A+ YI+ +++ E+IF+GGDPL+ L ++ L I H+Q LR
Sbjct: 135 EDNKG--NKNNWLMAVDYIKNHTELNEIIFSGGDPLMAKDHELDWLISQLEAIPHIQRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P+RI L + L + V + H NH E E A+ +L +G+ LL+
Sbjct: 193 IHTRLPVVIPERITETLCKRLASSRLQVIMVTHVNHANEIDESFTNAMQKLKLSGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+ +ND+ L NL + I PYYLH D G +HF ++ E ++++ L
Sbjct: 253 QSVLLRQVNDNVTALMNLSNALFDTGILPYYLHVLDKVQGAAHFLVSDTEARQLIQQLLS 312
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
K+SG P ++ G K +D +
Sbjct: 313 KVSGYLVPKLAREIGGEPSKTLLDLN 338
>gi|197286378|ref|YP_002152250.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
gi|194683865|emb|CAR45006.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
Length = 342
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 160/319 (50%), Gaps = 4/319 (1%)
Query: 6 KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ ++ +L ++ ++ + + + + + +PNDP+ Q +
Sbjct: 21 QAISDPVELLQLLALEHHAELQRGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAH 80
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E + P DP+ + + + G++H+Y +R LL + C V CR+CFRR
Sbjct: 81 AEFTLTPGFSTDPLDEQQ-NAVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYEDNKG 139
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + + A+ YI+ ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+
Sbjct: 140 --NKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQLEAIPHIKRLRIHSRL 197
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P RI L Q L+++ + +H NH E + A +L NA + LL+Q VLL
Sbjct: 198 PVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDDALREACLKLKNAHVTLLNQGVLL 257
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND+ + LA+L R + I PYYLH D G +HF + E ++I+ SL +SG
Sbjct: 258 RGVNDNAQTLADLSRALFDAGIMPYYLHVLDKVQGAAHFMVPDSEAREIMKSLMSLVSGY 317
Query: 305 CQPFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 318 MVPKLTREIGGEPSKTLLD 336
>gi|238756148|ref|ZP_04617468.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC
29473]
gi|238705622|gb|EEP98019.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC
29473]
Length = 334
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 163/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + ++ + + + + + + DP+ Q
Sbjct: 8 LQQLADVITDPDELLCLLALNEHAELRQGTAARRLFPLRVPRAFVARMRSGDAKDPLLLQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE +P +DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 68 VLTAREEFIAVPGFTDDPLDEQ-RSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 126
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + AL YI + ++ E+IF+GGDPL+ L ++ L I H++ LR
Sbjct: 127 QDNQG--NKANWQQALDYIAQHPELDEIIFSGGDPLMAKDHELDWLITQLENIAHIKRLR 184
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI L Q L ++ V + H NHP E + +++RL AG+ LL+
Sbjct: 185 IHTRLPVVIPARITSTLCQRLLDSRLQVLLVTHINHPNEIDQSLCDSMARLKQAGVTLLN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+ +N+DP++LA L I PYY+H D G +HF + +E + ++ L
Sbjct: 245 QSVLLRDVNNDPDVLAALSHALFNAGILPYYIHVLDKVQGAAHFMVDDDEARLLIKGLLS 304
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 305 RVSGYLVPRLAREIGGEPSKTPLD 328
>gi|325577289|ref|ZP_08147773.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392]
gi|325160871|gb|EGC72992.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392]
Length = 340
Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 98/318 (30%), Positives = 150/318 (47%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L + E E +++ + + NP DP+ Q +
Sbjct: 22 LKN-AISDPKILLKTLNLPVEDFAEDIAARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMT 80
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
++E +DP+ + + + I+H+Y +R+L C V CR+CFRR Q
Sbjct: 81 VQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDQN 140
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ + A+ YI +I EVIF+GGDP++ +L+ L IKH+Q LR HS
Sbjct: 141 PG--NKVSWKQAIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERLEKIKHLQRLRIHS 198
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V P+RI E L + H NHP E E A+ +L A +ILL+QSV
Sbjct: 199 RLPVVIPERITDEFCDLLLNSPLQAVFVTHINHPNEIDEGLAFAMQKLTEAKVILLNQSV 258
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLK +ND+P L L + I PYYLH D G SHF ++ E +I L+ S
Sbjct: 259 LLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDERALQIYRELQALTS 318
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 319 GYLVPKLAREIGGEPNKT 336
>gi|253991228|ref|YP_003042584.1| hypothetical protein PAU_03754 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782678|emb|CAQ85842.1| conserved hypothetical Protein [Photorhabdus asymbiotica]
Length = 342
Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 103/317 (32%), Positives = 165/317 (52%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + ++ + + + + A + +PNDP+ Q I EE
Sbjct: 23 ITDPDELLQLLSLHEHPELTKGSSARRLFPLRVPRAFAARMRASDPNDPLLLQVITAPEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
NI+P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FNIVPGFSADPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYEDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YIQ+ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKHNWQQALNYIQQHPELDEIIFSGGDPLMAKDHELDWLISNLEQISHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L L ++ V + H NH E + ++ L +AGI LL+QSVLL+G
Sbjct: 200 VIPARITTTLCNRLAQSRLQVIMVTHINHENEIDQSLRNSMMLLKHAGITLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N+ P+ILANL + I PYY+H D G +HF ++ EE + I+ L K+SG
Sbjct: 260 VNNHPDILANLSNALFDAGILPYYIHVLDKVQGAAHFMVSDEEARGIIRELLTKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGESSKTPLD 336
>gi|326404849|ref|YP_004284931.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301]
gi|325051711|dbj|BAJ82049.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301]
Length = 325
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 150/321 (46%), Positives = 194/321 (60%), Gaps = 6/321 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +A L A L ++ ++ Y+ A+ +A LI +P DPI QFIP E
Sbjct: 5 TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALI--GDPADPIGLQFIPDPAE 62
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD+ SP+ GIVHRYPDR LLK CPVYCRFCFRRE VG + G VL
Sbjct: 63 LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + EAA ++ + + EVI TGGDPLILS +RL + LR I H+ LR H+RVP+
Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P L+ L + P+++ +HANH EF EA A + L AGI LL QSVLL+G
Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L L T +E +KPYYLH D A GT+ F + I EG+ ++A+L+ ISG
Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPITEGRALIAALRGTISGHAL 300
Query: 307 PFYILDLPGGYGKVKIDTHNI 327
P YILD P GK ++ +
Sbjct: 301 PTYILDSPA--GKTTLEPSPV 319
>gi|284008180|emb|CBA74439.1| radical SAM superfamily protein [Arsenophonus nasoniae]
Length = 340
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 109/324 (33%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q + +T +L + ++ + + + + + NDP+ RQ
Sbjct: 16 LQQLAEAVTDPDELLRLLSLQNNPELRAGSAARALFPLRVPHPFIAKMRIGDANDPLLRQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
I K E N+ P DP+ + +HSP+ G++H+Y DR+LL + C V CR+CFRR
Sbjct: 76 VITLKSEFNLTPTFSADPLNE-HHSPIPGLLHKYQDRVLLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + ++ + AL YIQ +++ EVIF+GGDPL+ L ++ L I H++ LR
Sbjct: 135 EENKG--NKQNWQTALNYIQRHTELNEVIFSGGDPLMAKDHELDWLMSRLETIPHIKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L Q + V + H NH E E A+ +L + LL+
Sbjct: 193 IHSRLPVVIPARITTTLCQRFNISRLQVIMVTHINHANEIDNEFSHAMEQLKQVNVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+GIND+ + LA L E I PYYLH D G +HF +T EE + I+ L
Sbjct: 253 QSVLLRGINDNADSLAKLSNKLFENGILPYYLHLLDKVQGAAHFMVTDEEARIIMKELLT 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
+ISG P ++ G K ID
Sbjct: 313 RISGYLVPRLTREIGGKLSKTPID 336
>gi|319896657|ref|YP_004134850.1| lysine 2,3-aminomutase [Haemophilus influenzae F3031]
gi|317432159|emb|CBY80510.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3031]
Length = 338
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 153/318 (48%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ L A + ++ ++ + + + + + NP DP+ Q +
Sbjct: 20 LKN-AISDPTLLLKALNLPEDDFEQSIAARKLFPLRVPQPFIDKMEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAAPNILHKYQNRLLFMTKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNAMQKLNTVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLRGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|212710982|ref|ZP_03319110.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM
30120]
gi|212686150|gb|EEB45678.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM
30120]
Length = 342
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 97/326 (29%), Positives = 166/326 (50%), Gaps = 4/326 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q + +T+ +L ++ Q E E + + + + + +P DP+ Q
Sbjct: 16 IQQLAEAVTNPDELLQLLNLEDHQPSREGHEARKLFPLRVPHPFISRMKKGDPLDPLLLQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ K E +I P DP+ + + + ++H+Y +R L+ + C V CR+CFRR
Sbjct: 76 VLTAKAEFDIHPGFSTDPL-EEQDNAIPSLLHKYRNRALMLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + A+ YI+ S++ E+IF+GGDPL+ L ++ L I H+ LR
Sbjct: 135 EDNKG--NKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQLEEIPHITRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P+RI L Q L ++ V + H NH E +E A+ +L +G+ LL+
Sbjct: 193 IHSRLPVVIPERITDTLCQRLTQSRLHVIMVTHVNHANEIDDEFAQAMLKLKRSGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+ +ND+ LANL ++ I PYYLH D G +HF ++ E ++++ L
Sbjct: 253 QSVLLRQVNDNVTALANLSNALFDVGILPYYLHVLDKVQGAAHFLVSDLEARQLIRELLS 312
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
++SG P ++ G K +D +
Sbjct: 313 QVSGYLVPKLAREIGGEPSKTLLDLN 338
>gi|148261362|ref|YP_001235489.1| lysine 2,3-aminomutase YodO family protein [Acidiphilium cryptum
JF-5]
gi|146403043|gb|ABQ31570.1| L-lysine 2,3-aminomutase [Acidiphilium cryptum JF-5]
Length = 325
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 150/321 (46%), Positives = 194/321 (60%), Gaps = 6/321 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +A L A L ++ ++ Y+ A+ +A LI +P DPI QFIP E
Sbjct: 5 TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALI--GDPADPIGLQFIPDPAE 62
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD+ SP+ GIVHRYPDR LLK CPVYCRFCFRRE VG + G VL
Sbjct: 63 LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + EAA ++ + + EVI TGGDPLILS +RL + LR I H+ LR H+RVP+
Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P L+ L + P+++ +HANH EF EA A + L AGI LL QSVLL+G
Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L L T +E +KPYYLH D A GT+ F + I EG+ ++A+L+ ISG
Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPIVEGRALIAALRGTISGHAL 300
Query: 307 PFYILDLPGGYGKVKIDTHNI 327
P YILD P GK ++ +
Sbjct: 301 PTYILDSPA--GKTTLEPSPV 319
>gi|148825389|ref|YP_001290142.1| DNA repair protein RecO [Haemophilus influenzae PittEE]
gi|229846415|ref|ZP_04466523.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1]
gi|148715549|gb|ABQ97759.1| DNA repair protein RecO [Haemophilus influenzae PittEE]
gi|229810508|gb|EEP46226.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1]
gi|309972513|gb|ADO95714.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 338
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|327538979|gb|EGF25616.1| KamA family protein [Rhodopirellula baltica WH47]
Length = 381
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 106/319 (33%), Positives = 177/319 (55%), Gaps = 4/319 (1%)
Query: 6 KTLTSAQDLYNANLIKK--EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ + SA +L + D + + + + A + P +PNDP+ RQ +P
Sbjct: 65 RAIRSAGELRRYLNLDPPVGDPDGSDAEDHGFPVFVPLEFAARMKPGDPNDPLLRQVLPL 124
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EE N DP+GD + + G++H+Y R L C ++CR+CFRRE S+
Sbjct: 125 PEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITTGACGIHCRYCFRREFPYSENS 184
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ E AL Y++E I EV+ +GGDPL L+ + K+++ + I HV+ LR+H+R
Sbjct: 185 SR--GDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSVAKLMQQIESIPHVRRLRWHTR 242
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+PIV P R+ I+ ++ + ++ +H NHP E E AA+ RL +AGI +L+Q+VL
Sbjct: 243 MPIVIPSRVTDAWIERMQASRLTSWVVVHCNHPAELDSETGAALMRLVDAGIPVLNQAVL 302
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+NDD ++L +L R ++LR+ PYYLH D G +HF + E G+ +V+ L+ ++ G
Sbjct: 303 LRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAHFEVDQECGRALVSQLESRLPG 362
Query: 304 LCQPFYILDLPGGYGKVKI 322
P ++ + G K ++
Sbjct: 363 FAVPRFVCEQAGQASKTRL 381
>gi|13471862|ref|NP_103429.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
gi|14022606|dbj|BAB49215.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
Length = 367
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 130/344 (37%), Positives = 191/344 (55%), Gaps = 4/344 (1%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ + +DL + + + + + H+ + +LI+ ++P DPI Q IP
Sbjct: 21 RQGVRHVRDL-DRLPLSPVERAAAQAAAAHHKVRAPKAYLDLIDWNDPADPIRAQVIPSP 79
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL E DPI D++ SP+ + HR+ DR+LL + C VYCRFCFR+E + + G
Sbjct: 80 DELEEAEGELGDPIADHDFSPVPRLTHRHTDRVLLFPTYQCAVYCRFCFRKESL-TSIGR 138
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + E ALAYI + +I EVI TGGDPL L K L +++ + I HV++LR H+RV
Sbjct: 139 GYTREALEPALAYIADHPEIREVILTGGDPLSLPDKALAEIVARIEAIPHVRLLRIHTRV 198
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+ P RI L+ L+ V + H NH E + A + AG +LL+QSVLL
Sbjct: 199 PVALPSRITSGLVAALQG-RLMVTVVTHFNHAREITPATEVACRTMRQAGFVLLNQSVLL 257
Query: 245 KGINDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
KG+ND E+L L R L +KPYYLHH DLA G +H R TI +GQ +V +L+ ++SG
Sbjct: 258 KGVNDTVEVLEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALVEALRARLSG 317
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+C P Y+LDLP G GKV + I+ ++ I + Y
Sbjct: 318 ICNPVYVLDLPEGGGKVPLGPCPIEGREGDTWRIRGQDGAMRTY 361
>gi|322831134|ref|YP_004211161.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602]
gi|321166335|gb|ADW72034.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602]
Length = 342
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 160/317 (50%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + ++ +E + + + + P +P DP+ Q + +EE
Sbjct: 23 ITDPDELLTLLALNDNAELQSGREARRLFPLRVPRAFVARMQPGDPQDPLLLQVLTAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FIAAPGFTTDPLDEQ-RSVVPGLLHKYSNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI+ + ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKANWVQALDYIRTRPELDEIIFSGGDPLMAKDHELDWLIGELEGIAHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI Q L+++ V + H NH E + A++++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDVFCQRLEKSRLQVLMVTHINHANEINNALRASMAKLKRHGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND ++LA L + I PYY+H D G +HF + +E + I+ L K+SG
Sbjct: 260 VNDSADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVNDDEARVIMKGLMSKVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLTREIGGEPSKTILD 336
>gi|294634433|ref|ZP_06712969.1| KamA family protein [Edwardsiella tarda ATCC 23685]
gi|291092143|gb|EFE24704.1| KamA family protein [Edwardsiella tarda ATCC 23685]
Length = 342
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T DL + + E + + + + P +P DP+ RQ
Sbjct: 16 LQQLADVVTDPADLLAQLSLADHPEWRAGCEARRLFPLRVPRAFIRRMRPGDPQDPLLRQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ E P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 76 VMSDAAEFIETPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + + AL Y++E ++ E+IF+GGDPL+ L + L + H++ LR
Sbjct: 135 QENQG--TRANWQRALEYLREHPELDEIIFSGGDPLMAKDHELDWLFSQLESLPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P R+ L Q + E+ + + H NH E E AA+ RL AG+ LL+
Sbjct: 193 IHSRLPVVIPARVTETLCQRMAESRLQMLLVTHINHANEIDEALSAAMQRLKQAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND+ + LA L + I PYYLH D G +HF + +E + ++ L
Sbjct: 253 QSVLLRGVNDNADTLAALSNALFDAGILPYYLHVLDRVQGGAHFMVPDDEARVLMHGLLA 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K ++D
Sbjct: 313 RVSGYLVPRLTREIGGEPSKTQLD 336
>gi|209696199|ref|YP_002264129.1| hypothetical protein VSAL_I2793 [Aliivibrio salmonicida LFI1238]
gi|208010152|emb|CAQ80477.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 340
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 157/317 (49%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L + I ++ E +++ + + + NP DP+ RQ +P +E
Sbjct: 23 AISDPHQLLSTLGIDSSPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + G++H+Y +R+LL L C V CR+CFRR
Sbjct: 83 FEVHDGYSTDPLDEQ-DNEQPGLLHKYKNRVLLILKGGCAVNCRYCFRRHFPYEDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ YI ++ EVI +GGDPL+ L+ +++ L + H++ LR HSR+P+
Sbjct: 140 GKSVWQNSINYIAAHPELNEVILSGGDPLMAKDHELEWLIQHLDKVPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L + E V + H NH E S +++L A + LL+QSVLLKG
Sbjct: 200 VIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKMTQLKQANVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND + L NL + I PYYLH D G +HF ++ E+ ++++A L E +SG
Sbjct: 260 INDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSDEKAKELMAELIENVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PTLAREIGGRKSKTPLD 336
>gi|119475089|ref|ZP_01615442.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143]
gi|119451292|gb|EAW32525.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143]
Length = 343
Score = 329 bits (845), Expect = 3e-88, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 170/316 (53%), Gaps = 2/316 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ ++L+N + K ++ + + + + + + + + +DP+ +Q +P +EL
Sbjct: 29 IRDPEELFNLLELDKSKLPDALRGCDDFPLQVPRAFVDRMVKGDWSDPLLQQILPLGQEL 88
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
++ P DP+ + + +P+ G++H+Y R+LL + C + CR+CFRR + S
Sbjct: 89 DLHPGFSNDPLLELSDNPIPGLIHKYHGRVLLIVSGGCAINCRYCFRRHFPYQEN--NPS 146
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
++ + AL YI++ + I EVI +GGDPL + L+ + + I HV+ILR HSR+P+V
Sbjct: 147 QREWQQALDYIRQDNSIKEVILSGGDPLAANDNMLRDLTTRIADIPHVEILRVHSRMPVV 206
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI + L + IH+NHP E I A+ L G+ LL+Q+VLL GI
Sbjct: 207 IPQRITSPSMNWLTNTRLTPVMVIHSNHPNEIDHHVIEALQTLKREGVTLLNQTVLLAGI 266
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND+PE L L + + PYYLH D +G +HF +T ++++ L+ ++ G P
Sbjct: 267 NDNPEALLALSKRLFAAGVLPYYLHMLDKVSGAAHFEVTERRAKELITILRNQLPGYLIP 326
Query: 308 FYILDLPGGYGKVKID 323
+ + G K+ I+
Sbjct: 327 KLVREQSGELSKMPIN 342
>gi|254427978|ref|ZP_05041685.1| KamA family protein [Alcanivorax sp. DG881]
gi|196194147|gb|EDX89106.1| KamA family protein [Alcanivorax sp. DG881]
Length = 335
Score = 329 bits (845), Expect = 3e-88, Method: Composition-based stats.
Identities = 101/315 (32%), Positives = 166/315 (52%), Gaps = 3/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T +L++ + + + + + + + +L+ NP+DP+ RQ + EE
Sbjct: 22 ITDPAELFSQLALTPQDLPASLAAAGDFPLRVPRRYVDLMERGNPDDPLLRQVLSAPEER 81
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ DP+ + +H+ + G++H+Y R LL + C V+CR+CFRR T LS
Sbjct: 82 QVHQGYSADPLDEADHTAVPGLLHKYHGRALLVVTGACAVHCRYCFRRHFPYQ---THLS 138
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
K E AL ++ + I EVI +GGDPL L+++RL+++L L I H++ LR HSR P+V
Sbjct: 139 GKRWEQALEWLAARPDIHEVILSGGDPLTLTNRRLEQLLDALAAIPHLRRLRIHSRTPVV 198
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+R++ L L + +HANHP E S +A +AG+ LL+QSVLL G+
Sbjct: 199 IPERLDAGLKALLTRDRWQTVLVLHANHPREISPALVARCRDWRSAGMTLLNQSVLLAGV 258
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + LA+L + + PYYLH D G +HF + +++ A L+ ++ G P
Sbjct: 259 NDRVDTLADLSDALFDAGVLPYYLHQLDAVQGAAHFAVPDVIARELHADLRARLPGFLVP 318
Query: 308 FYILDLPGGYGKVKI 322
+ PG K +
Sbjct: 319 RLTREEPGEPAKTVL 333
>gi|37527976|ref|NP_931321.1| hypothetical protein plu4131 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787412|emb|CAE16503.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 342
Score = 329 bits (845), Expect = 3e-88, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + K + + + + + + +PNDP+ Q I EE
Sbjct: 23 ITDPDELLQLLSLDKHPTLTKGSGARRLFPLRVPRAFVTRMQVSDPNDPLLLQVITTPEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + S + G++H+Y +R LL + C + CR+CFRR
Sbjct: 83 FTLTPGFSTDPLDEQ-RSAVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPYEDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YIQ+ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKRNWQQALDYIQQHPELDEIIFSGGDPLMAKDHELDWLISNLEKISHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L L ++ V + H NH E + ++ L AGI LL+QSVLL+G
Sbjct: 200 VIPARITTTLCDRLAQSRLQVIMVTHINHANEIDQSLRNSMILLKQAGITLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IN+ + LA+L + I PYY+H D G +HF + EE + ++ L KISG
Sbjct: 260 INNHSDTLADLSNALFDAGILPYYIHVLDKVQGAAHFMVNDEEAKGLIRELLTKISGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLD 336
>gi|32471298|ref|NP_864291.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1]
gi|32443139|emb|CAD71970.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1]
Length = 381
Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats.
Identities = 104/319 (32%), Positives = 177/319 (55%), Gaps = 4/319 (1%)
Query: 6 KTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ + SA +L + + + + + + + A + P +PNDP+ RQ +P
Sbjct: 65 RAIRSAGELRRHLNLDLSAGESNGTNAEDHGFPVFVPLEFAARMKPGDPNDPLLRQVLPL 124
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EE N DP+GD + + G++H+Y R L C ++CR+CFRRE S+
Sbjct: 125 PEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITTGACGIHCRYCFRREFPYSENS 184
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ E AL Y++E I EV+ +GGDPL L+ + K+++ + I HV+ LR+H+R
Sbjct: 185 SR--GDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSVAKLMQQIESIPHVRRLRWHTR 242
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+PIV P R+ I ++ + ++ +H NHP E E AA+ RL +AG+ +L+Q+VL
Sbjct: 243 MPIVIPSRVTDAWIVRMQASRLTSWVVVHCNHPAELDSETGAALMRLVDAGVPVLNQAVL 302
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+NDD ++L +L R ++LR+ PYYLH D G +HF + E G+ +V+ L+ ++ G
Sbjct: 303 LRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAHFEVDQECGRALVSQLESRLPG 362
Query: 304 LCQPFYILDLPGGYGKVKI 322
P ++ + G K ++
Sbjct: 363 FAVPRFVCEQAGQASKTRL 381
>gi|16272281|ref|NP_438493.1| hypothetical protein HI0329 [Haemophilus influenzae Rd KW20]
gi|68248934|ref|YP_248046.1| lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP]
gi|260581205|ref|ZP_05849024.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW]
gi|260582577|ref|ZP_05850367.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127]
gi|319775807|ref|YP_004138295.1| lysine 2,3-aminomutase [Haemophilus influenzae F3047]
gi|1176350|sp|P44641|Y329_HAEIN RecName: Full=Uncharacterized KamA family protein HI_0329
gi|1573296|gb|AAC21990.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|68057133|gb|AAX87386.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP]
gi|260092130|gb|EEW76074.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW]
gi|260094388|gb|EEW78286.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127]
gi|317450398|emb|CBY86614.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3047]
Length = 338
Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|145634674|ref|ZP_01790383.1| DNA repair protein RecO [Haemophilus influenzae PittAA]
gi|145268219|gb|EDK08214.1| DNA repair protein RecO [Haemophilus influenzae PittAA]
Length = 338
Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 157/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|301169034|emb|CBW28631.1| predicted lysine aminomutase [Haemophilus influenzae 10810]
Length = 338
Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats.
Identities = 102/318 (32%), Positives = 155/318 (48%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|311281298|ref|YP_003943529.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae
SCF1]
gi|308750493|gb|ADO50245.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae
SCF1]
Length = 342
Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 160/301 (53%), Gaps = 3/301 (0%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
E + +E +++ + + NPNDP+ +Q I ++E P DP+ +
Sbjct: 39 EDLLAGREAKRLFALRVPRAFVARMEKGNPNDPLLKQVITSQDEFVAAPGFSTDPL-EEQ 97
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
HS + G++H+Y +R LL + C V CR+CFRR ++ + ++ + ALAYI
Sbjct: 98 HSVVPGLLHKYLNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALAYIAAHP 155
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+V P RI L +
Sbjct: 156 ELDEIIFSGGDPLMAKDHELDWLISELEAIPHIKRLRIHSRLPVVIPARITGALAERFAR 215
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + + H NH E ++ AA+ L AG+ LL+QSVLL+G+ND+ + LANL
Sbjct: 216 SSLQILLVNHINHAQEIDDDFRAAMKTLRQAGVTLLNQSVLLRGVNDNAQTLANLSNALF 275
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ + PYYLH D G +HF ++ +E + IV L ISG P ++ G K +
Sbjct: 276 DAGVMPYYLHVLDKVQGAAHFMVSDDEARTIVRELLTLISGYMVPKLAREIGGEPSKTPL 335
Query: 323 D 323
D
Sbjct: 336 D 336
>gi|116327784|ref|YP_797504.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116331557|ref|YP_801275.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120528|gb|ABJ78571.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125246|gb|ABJ76517.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 420
Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats.
Identities = 117/355 (32%), Positives = 191/355 (53%), Gaps = 10/355 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + +L + + + I++ +++ TP +L +P +P+DPI + I
Sbjct: 36 QLQNR-VRGF-ELGRYFDLTESEKVGIEDTI-RLNVSATPYYISLTDPEDPDDPIRKMII 92
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P++ E PEE DP+ + SP+KG+ H YPDR+LL H C VYCR C R V
Sbjct: 93 PREAETVFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 152
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K +++ +D EA YI+ +I +V+ +GGDPL LS ++ ++L+ L I+HV+I R
Sbjct: 153 KERMIT-EDLEACFEYIEACPEITDVVLSGGDPLNLSDSKIDRILERLEKIEHVKICRLG 211
Query: 182 SRVPIVDPQRINPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+R P+ P RI +L ++ ++ NH E + EA AI +L AG+ +
Sbjct: 212 TRNPVTLPFRITSDLCNIIESHNTHRLSIFCNTQFNHAKECTSEAKEAILKLLKAGVNVG 271
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q VLLKGIND EI+ L + +ELR++ YY++ P+L G+ FR + +G +I++ ++
Sbjct: 272 NQCVLLKGINDSGEIMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIISYMR 331
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTH-NIKKVGNGSY-CITD-HHNIVHDYPPK 350
KI G+ P ++ DLPGG GKV + + H H P
Sbjct: 332 GKIGGMGIPQFVNDLPGGGGKVTLTPDWYLGFYKPERMHVFRSALHGSYHLSPEP 386
>gi|145632578|ref|ZP_01788312.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655]
gi|144986773|gb|EDJ93325.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655]
Length = 338
Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETPLQKVMVTHINHPNEIDQVFTNAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|153206246|ref|ZP_01945509.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|154706630|ref|YP_001423526.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111]
gi|212217836|ref|YP_002304623.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154]
gi|120577376|gb|EAX34000.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|154355916|gb|ABS77378.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111]
gi|212012098|gb|ACJ19478.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154]
Length = 342
Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 169/321 (52%), Gaps = 3/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+ + +++ +L+N + + + +++++++ + + NPNDP+ Q +
Sbjct: 9 QLK-RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQIL 67
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q
Sbjct: 68 PQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQ 127
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H
Sbjct: 128 N--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIH 185
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QS
Sbjct: 186 TRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQS 245
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + +
Sbjct: 246 VLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHL 305
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P ++ ++PG K +
Sbjct: 306 PGYLVPKFVREIPGALSKTPL 326
>gi|307824010|ref|ZP_07654237.1| lysine 2,3-aminomutase YodO family protein [Methylobacter
tundripaludum SV96]
gi|307734794|gb|EFO05644.1| lysine 2,3-aminomutase YodO family protein [Methylobacter
tundripaludum SV96]
Length = 336
Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats.
Identities = 111/318 (34%), Positives = 170/318 (53%), Gaps = 2/318 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + +DL + + + + ++ + + A + NP+DP+ RQ +
Sbjct: 17 QQLAEAFNNIEDLCRYLHLSPDDLPVSDIAAENFPLRVPLSFAACMEKGNPHDPLLRQVL 76
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P KEEL P DP+GD + G++H+Y R+L C + CR+CFRR +
Sbjct: 77 PIKEELFAYPGFSNDPVGDLAAATQVGVLHKYHGRVLFINTGSCAINCRYCFRRNFPYAD 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
LS + +AA+ IQ+ I EVI +GGDPL+LS RL ++++ L IKH++ +R H
Sbjct: 137 --LQLSKQKEDAAIQAIQDDPSISEVILSGGDPLLLSDSRLTRLIRQLDGIKHLKRIRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+PIV P RI E I L ++ K + I +H NH E S+ IAA + L N+GI L +QS
Sbjct: 195 SRLPIVLPARITDEFINTLTQSPKQIIIIVHCNHANEISDRVIAACASLKNSGITLFNQS 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND+ E+L L I PYYLH D A GT HF ++ E ++ ++ +
Sbjct: 255 VLLRGVNDNAEVLGELSEQLFSHGITPYYLHLLDKATGTGHFEVSEAEALALMHQVQAAL 314
Query: 302 SGLCQPFYILDLPGGYGK 319
G P + + G K
Sbjct: 315 PGYLVPKLVKEQAGATSK 332
>gi|262273034|ref|ZP_06050853.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886]
gi|262222944|gb|EEY74250.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886]
Length = 340
Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats.
Identities = 94/317 (29%), Positives = 160/317 (50%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ Q L I+ N + + N + NP+DP+ RQ +P EE
Sbjct: 23 AVSDPQILLQQLDIEPSSWTSGFSARNLFVQRVPQSFINRMEKGNPDDPLLRQVLPVIEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ +P DP+ + + + G++H+Y +R+L+ + C + CR+CFRR
Sbjct: 83 FDEVPGFSTDPL-EEQGNDVPGLLHKYKNRVLMIVKGGCAINCRYCFRRHFPYQDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
A+AY+Q+ ++ EVI +GGDPL+ LQ +++ + + H++ LR H+R+P+
Sbjct: 140 GKSTWREAIAYLQQHPEVDEVILSGGDPLMAKDHELQWLIEAIESVPHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ L L + + + H NH E +E A ++ L +AG+ LL+Q VLL+G
Sbjct: 200 VIPSRVTVTLANMLATSRLNIVLVTHINHANEIDDELRAVMATLKHAGVTLLNQGVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L NL + I PYYLH D G +HF + E + +++ L +++SG
Sbjct: 260 VNDSVEALKNLSNRLFDAGILPYYLHVLDKVKGAAHFLVDDETARNLMSGLIKEVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLTREIGGRDSKTPLD 336
>gi|29655147|ref|NP_820839.1| radical SAM domain-containing protein [Coxiella burnetii RSA 493]
gi|161831507|ref|YP_001597682.1| KamA family protein [Coxiella burnetii RSA 331]
gi|29542416|gb|AAO91353.1| lysine 2,3-aminomutase [Coxiella burnetii RSA 493]
gi|161763374|gb|ABX79016.1| KamA family protein [Coxiella burnetii RSA 331]
Length = 342
Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 169/321 (52%), Gaps = 3/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+ + +++ +L+N + + + +++++++ + + NPNDP+ Q +
Sbjct: 9 QLK-RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQIL 67
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q
Sbjct: 68 PQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQ 127
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H
Sbjct: 128 N--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIH 185
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QS
Sbjct: 186 TRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQS 245
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + +
Sbjct: 246 VLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMIKHL 305
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P ++ ++PG K +
Sbjct: 306 PGYLVPKFVREIPGALSKTPL 326
>gi|332083734|gb|EGI88952.1| kamA family protein [Shigella dysenteriae 155-74]
Length = 301
Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats.
Identities = 96/295 (32%), Positives = 160/295 (54%), Gaps = 3/295 (1%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
+ +++ + + + NP+DP+ RQ + ++E I P DP+ + HS + G
Sbjct: 4 RNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPG 62
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
++H+Y +R LL + C V CR+CFRR ++ + ++ + AL Y+ ++ E+I
Sbjct: 63 LLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMI 120
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
F+GGDPL+ L +L L I H++ LR HSR+PIV P RI L++ + +
Sbjct: 121 FSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITEALVERFSHSTLQIL 180
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ H NH E E A+++L AG+ LL+QSVLL+G+ND+ + LANL + + P
Sbjct: 181 LVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMP 240
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
YYLH D G +HF ++ +E ++I+ L +SG P ++ G K +D
Sbjct: 241 YYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 295
>gi|292490713|ref|YP_003526152.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus
halophilus Nc4]
gi|291579308|gb|ADE13765.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus
halophilus Nc4]
Length = 336
Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 157/317 (49%), Gaps = 2/317 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + + Q+L + + + + + + +PNDP+ RQ P
Sbjct: 20 RAVRNPQELLALIGLNHHPQLAGEATRRQFPLRVPRGYIARMKKGDPNDPLFRQVFPLIA 79
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E I P DP+GD P G++ +Y R+LL C ++CR+CFRR +
Sbjct: 80 EDQISPGFSADPVGDLAAMPAPGVLQKYAGRVLLVTTGACAIHCRYCFRRHFPYADH--N 137
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + AL YI + EVI +GGDPL L+ RL ++++ L I HV+ LR H+R+P
Sbjct: 138 PAPSQWQQALQYIAQNPSTQEVILSGGDPLTLTDNRLTELVQALAAISHVKRLRIHTRLP 197
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P+R++ L+Q L+ + IHANH E + A+ L+ AG L +Q+VLL+
Sbjct: 198 VVLPERVDSHLLQWLEHTSLQKVVVIHANHANELDDRVGEALEGLSRAGCRLFNQTVLLR 257
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND L +L + + + PYYLH D G +HF + Q + +L+ ++ G
Sbjct: 258 GINDRVSALCDLSESLFDAGVIPYYLHLLDRVQGAAHFEVDTPTAQCLHRTLRARLPGYL 317
Query: 306 QPFYILDLPGGYGKVKI 322
P + +L G K+ +
Sbjct: 318 VPLLVQELAGAPSKLPL 334
>gi|145638760|ref|ZP_01794369.1| DNA repair protein RecO [Haemophilus influenzae PittII]
gi|145272355|gb|EDK12263.1| DNA repair protein RecO [Haemophilus influenzae PittII]
gi|309750250|gb|ADO80234.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 338
Score = 328 bits (842), Expect = 7e-88, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 155/318 (48%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + K+ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPKDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|312882797|ref|ZP_07742531.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369581|gb|EFP97099.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 340
Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 166/322 (51%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ + L I + ++ + + + NPNDP+ RQ +
Sbjct: 19 QLAN-GISDPETLLKQLQIDPQPWSAGFRARKLFAQRVPQSFIDRMEKGNPNDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E NI PE DP+ + + + G++H+Y +R+L+ + C + CR+CFRR S+
Sbjct: 78 PLIDEFNIHPEYSSDPL-EEQSNEIPGLLHKYHNRVLMIVKGGCAINCRYCFRRHFPYSE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +L YI +I EVI +GGDPL+ L+ + + I HV+ LR H
Sbjct: 137 NKG--TKSVWQQSLRYISLHKEIDEVILSGGDPLMAKDDELRWLFSEIAKISHVKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI ELI+ ++ + H NH E + E A+ +L A + LL+Q
Sbjct: 195 SRLPVVIPARITSELIELIENNRLTTILVTHVNHANEINIELKQALQKLKAANVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND+ + L +T + + PYY+H D G +HF ++ + ++I+A L E++
Sbjct: 255 VMLKGVNDNADAQVQLSQTLFDAGVMPYYMHVLDKVQGATHFFISDQRAREIMAELIERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREVGGRKSKTPLD 336
>gi|89075329|ref|ZP_01161751.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34]
gi|89048878|gb|EAR54447.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34]
Length = 340
Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 157/317 (49%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L I + +++ + + + NP+DP+ RQ +P ++E
Sbjct: 23 AISDPFQLLKLLKIDPTPWENGLAARKLFALRVPLSFIDKMEIGNPHDPLLRQILPLEQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R+LL + C V CR+CFRR S
Sbjct: 83 FEVHQGYSIDPLKEQQ-NDIPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + +L YI +I EVI +GGDPL+ LQ +++ + I H++ LR HSR+P+
Sbjct: 140 NKHQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLVEHIAAIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L E + H NH E + A+ +L A + LL+Q VLLKG
Sbjct: 200 VIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMGKLKQANVTLLNQGVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L +L + I+PYYLH D G +HF + E ++++A L ++SG
Sbjct: 260 VNDSVKALTDLSEALFDAGIQPYYLHVLDRVQGAAHFMIDDETARQLIAGLITQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLTREIGGRASKTPLD 336
>gi|261342808|ref|ZP_05970666.1| KamA family protein [Enterobacter cancerogenus ATCC 35316]
gi|288314849|gb|EFC53787.1| KamA family protein [Enterobacter cancerogenus ATCC 35316]
Length = 342
Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats.
Identities = 101/295 (34%), Positives = 160/295 (54%), Gaps = 3/295 (1%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
+E +++ + + NP+DP+ +Q + ++E P DP+ + +S + G
Sbjct: 45 REAKRLFALRVPRAFVARMEKGNPDDPLLKQTLTSQDEFVTAPGYSTDPL-EEQNSVVPG 103
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
++H+Y +R LL + C V CR+CFRR + + ++ + AL YI ++ E+I
Sbjct: 104 LLHKYLNRALLLVKGGCAVNCRYCFRRHFPYADNQG--NKRNWQVALDYIAAHPELDEII 161
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
F+GGDPL+ L +L L I H++ LR HSR+PIV P RI L+ L ++ V
Sbjct: 162 FSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDGLVSRLAQSRLQVL 221
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ H NH E +E AA+ RL AG+ LL+QSVLL+G+ND+ +LA+L + + P
Sbjct: 222 LVNHINHANEIDDEFRAAMIRLRQAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMP 281
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
YYLH D G +HF +T EE ++IV L +SG P ++ G K +D
Sbjct: 282 YYLHVLDRVQGAAHFMVTDEEARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLD 336
>gi|145640274|ref|ZP_01795858.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021]
gi|145274860|gb|EDK14722.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.4-21]
Length = 338
Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 157/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAFLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|212211887|ref|YP_002302823.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212]
gi|212010297|gb|ACJ17678.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212]
Length = 342
Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 169/321 (52%), Gaps = 3/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+ + +++ +L+N + + + +++++++ + + NPNDP+ Q +
Sbjct: 9 QLK-RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQIL 67
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q
Sbjct: 68 PQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQ 127
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H
Sbjct: 128 N--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIH 185
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QS
Sbjct: 186 TRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQS 245
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + +
Sbjct: 246 VLLKNVNDDSKALIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHL 305
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P ++ ++PG K +
Sbjct: 306 PGYLVPKFVREIPGALSKTPL 326
>gi|21231711|ref|NP_637628.1| hypothetical protein XCC2273 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768163|ref|YP_242925.1| hypothetical protein XC_1842 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991300|ref|YP_001903310.1| Putative radical SAM superfamily protein [Xanthomonas campestris
pv. campestris str. B100]
gi|21113412|gb|AAM41552.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573495|gb|AAY48905.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733060|emb|CAP51258.1| Putative radical SAM superfamily protein [Xanthomonas campestris
pv. campestris]
Length = 342
Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 163/321 (50%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + + ++L + + ++ + +++ + + P + DP+ RQ +
Sbjct: 24 QLWRQAVRDPRELLALLGLDAQAAGISEDAAAQFAVRVPRSFVARMRPGDLTDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ ++P D +GD G++ +Y R LL C V+CR+CFRR ++
Sbjct: 84 PLDAEMRVVPGFALDAVGDGAARTTTGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR H
Sbjct: 144 E--TAARDGWREAVAAIAADPDIDEVLLSGGDPLSLTTPKLAELTDALAAIPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+R++ L+ L+ PV IHANH EF E AA+ L AG LL+Q+
Sbjct: 202 SRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFDAEVDAALHALRGAGAQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA L + PYYLH D AG +HF + + + A L ++
Sbjct: 262 VLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELATRL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++PG GK +
Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342
>gi|323498137|ref|ZP_08103141.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326]
gi|323316848|gb|EGA69855.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326]
Length = 340
Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 163/323 (50%), Gaps = 3/323 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ L I + E ++ + + + NP DP+ RQ
Sbjct: 17 LQQLANGISDPAKLLEQLEIDPTPWQQGFEARQLFAQRVPQSFVDRMEKGNPFDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE ++ DP+ + + + G++H+Y +R L+ + C + CR+CFRR
Sbjct: 77 LPLSEEFDVKQGYSNDPLLEQ-DNAIPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYQ 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ S + +L Y+Q++ +I EVI +GGDPL+ L+ +++ + IKH++ +R
Sbjct: 136 ENKG--SKAVWQQSLDYVQQQPEINEVILSGGDPLMAKDDELRWLVERIADIKHIKRIRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL++ V + H NH E + E A +RL AGI LL+Q
Sbjct: 194 HSRLPVVIPARITDELLEIFSTTRLQVVMVTHVNHAQEINHELRLATARLKLAGITLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
V+LKG+ND E L + I PYY+H D G +HF ++ E ++I+A L E+
Sbjct: 254 GVMLKGVNDSIEAQVALSEALFDANILPYYIHVLDKVQGAAHFYISDHEAKRIMAGLLER 313
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 314 VSGYLVPTLTREIGGRSSKTPLD 336
>gi|229844579|ref|ZP_04464719.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1]
gi|229812828|gb|EEP48517.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1]
Length = 338
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 154/318 (48%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLK +NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKDVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|238793387|ref|ZP_04637013.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC
29909]
gi|238727356|gb|EEQ18884.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC
29909]
Length = 335
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 98/324 (30%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + + E + + + + +P+DP+ Q
Sbjct: 8 LQQLADVITDPAELLRILSLNEHPNLQQGIEARRLFPLRVPRAFVARMRLGDPSDPLLLQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 68 VLTAREEFIAAPGFTTDPLDEQ-RSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 126
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR
Sbjct: 127 QDNQG--NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDELENIAHIKRLR 184
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI L Q L + V + H NH E + ++++L AG+ LL+
Sbjct: 185 IHTRLPVVIPDRITAALCQRLGDTRLQVLMVTHINHANEIDQPLRDSMAQLKRAGVTLLN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+GINDD E+LA L + I PYY+H D G +HF + +E + ++ L
Sbjct: 245 QSVLLRGINDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARLLMKGLLC 304
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++SG P ++ G K +D
Sbjct: 305 RVSGYLVPRLAREIGGELSKTPLD 328
>gi|165919300|ref|ZP_02219386.1| KamA family protein [Coxiella burnetii RSA 334]
gi|165917023|gb|EDR35627.1| KamA family protein [Coxiella burnetii RSA 334]
Length = 342
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 169/321 (52%), Gaps = 3/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+ + +++ +L+N + + + +++++++ + + NPNDP+ Q +
Sbjct: 9 QLK-RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQIL 67
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q
Sbjct: 68 PQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQ 127
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H
Sbjct: 128 N--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIH 185
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QS
Sbjct: 186 TRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQS 245
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + +
Sbjct: 246 VLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHL 305
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P +I ++PG K +
Sbjct: 306 PGYLVPKFIREIPGALSKTPL 326
>gi|295098305|emb|CBK87395.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 342
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 162/301 (53%), Gaps = 3/301 (0%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
E + +E +++ + + NP DP+ +Q + ++E P DP+ +
Sbjct: 39 EALRAGREAKRLFALRVPRAFVARMEKGNPGDPLLKQTLTSQDEFITAPGYSTDPL-EEQ 97
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+S + G++H+Y +R LL + C V CR+CFRR ++ + ++ + AL YI
Sbjct: 98 NSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALDYIAAHP 155
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
++ E+IF+GGDPL+ L +L L I H++ LR HSR+PIV P RI L+ L++
Sbjct: 156 ELDEIIFSGGDPLMAKDHELDWLLTQLETIPHIKRLRIHSRLPIVIPARITDALVTRLEQ 215
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ V + H NH E + AA++R+ AG+ LL+QSVLL+G+ND +LA+L
Sbjct: 216 SRLQVLLVNHINHANEIDADFRAAMARMRKAGVTLLNQSVLLRGVNDSARVLADLSNALF 275
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ + PYYLH D G +HF +T EE +KI+ L +SG P ++ G K +
Sbjct: 276 DAGVMPYYLHVLDRVQGAAHFMVTDEEARKIMRELLTLVSGYMVPKLAREIGGEPSKTPL 335
Query: 323 D 323
D
Sbjct: 336 D 336
>gi|194366516|ref|YP_002029126.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas
maltophilia R551-3]
gi|194349320|gb|ACF52443.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas
maltophilia R551-3]
Length = 346
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 99/321 (30%), Positives = 156/321 (48%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + L L + + + +++ + + + DP+ RQ +
Sbjct: 28 QLWRQALRDPHALLARLQLDPAALGVSDQAMAQFALRVPEGFVARMRKGDAADPLLRQVL 87
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE+ P D +GD G++ +Y R LL C + CR+CFRR
Sbjct: 88 PIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DY 145
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EVI +GGDPL L+ +L ++ LR I H++ LR H
Sbjct: 146 GAENAAKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDALRQIPHIRRLRIH 205
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+R++ EL+ L P+ I +HANH EF AA++RL G LL+Q+
Sbjct: 206 TRLPIVLPERVDEELLAWLGGLPWPLAIVVHANHANEFDASVDAAMARLRGTGAQLLNQA 265
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + L +L + PYYLH D G +HF + + + ++A L ++
Sbjct: 266 VLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTQAKALIAGLTARL 325
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + +LPG K +
Sbjct: 326 SGYLIPKLVRELPGDPSKRPL 346
>gi|326794182|ref|YP_004312002.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea
MMB-1]
gi|326544946|gb|ADZ90166.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea
MMB-1]
Length = 336
Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 165/320 (51%), Gaps = 2/320 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +T +L + + + + + + + I N NDP+ Q +PQ +
Sbjct: 19 RAITQLPELLKELDLPADLAATHIGATKTFRLLVPRPYLSRIEKGNLNDPLLLQVLPQHQ 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + +DP+ + NH+P K +VH+Y R+L+ +C V CR+CFRR
Sbjct: 79 ELADVEGYLKDPLQEANHTPQKALVHKYESRVLVITTGICAVNCRYCFRRHFPYGDNQ-- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ + ++ + Y+ I EVI +GGDPL+L K L + +++L I H++ LR H+R+P
Sbjct: 137 LAQSEWQSVIDYVTNDKNINEVILSGGDPLMLKDKVLAERVRSLESIAHLKRLRIHTRLP 196
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI+ ELI + ++ + + H NH E + +A+ RL G+ LL+Q VLLK
Sbjct: 197 VVIPSRIDDELIYWMSQSRLSIVLVTHINHANEIDQAVESAMLRLKQIGVTLLNQGVLLK 256
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
+ND E +L ++ + PYY+ D AG +HF + IE+ Q+++ + +K+ G
Sbjct: 257 NVNDSVEAQVDLSNRLFQVGLLPYYMFTFDPVAGAAHFDIPIEDAQRLMGEVTKKLPGYL 316
Query: 306 QPFYILDLPGGYGKVKIDTH 325
P ++PG K
Sbjct: 317 VPKLAKEIPGRASKTVFAPQ 336
>gi|304413330|ref|ZP_07394803.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1]
gi|304284173|gb|EFL92566.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1]
Length = 338
Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats.
Identities = 92/324 (28%), Positives = 159/324 (49%), Gaps = 4/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + ++ + K + + + L+ + NDP+ RQ
Sbjct: 16 LQQLANVITDPDELLQLLQLDTHPELPQGKSARRLFPLRVPRAFVALMRKGDANDPLLRQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ E + DP+ + + G++H+Y +R LL + C + CR+CFRR
Sbjct: 76 VLTSSAEFISPEDFITDPLAEQ-RTAAPGLLHKYGNRALLLVKGSCAINCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ K+ + AL YI++ ++ E+IF+GGDPL+ + L ++ L I H++ LR
Sbjct: 135 QDNQG--NKKNWQLALDYIRQHPELDEIIFSGGDPLMAKDRELSWLIDALEKIAHIKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI L Q + + + H NH E ++++L G+ LL+
Sbjct: 193 IHTRLPVVIPARITIALCQKFHASRLQIVLVTHINHANEIDNVLCDSMAKLKTKGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND+ E+LA L I PYYLH D G +HF + +E ++++ L
Sbjct: 253 QSVLLRGVNDNVEVLAQLSNALFNAGILPYYLHVLDKVKGAAHFMVNDDEARRLINGLLG 312
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
ISG P + ++ G K +
Sbjct: 313 CISGYLVPRLVREIAGEKSKTPLT 336
>gi|308048213|ref|YP_003911779.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
gi|307630403|gb|ADN74705.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
Length = 340
Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 162/317 (51%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
S +L + + + E + + + A + P + DP+ RQ +P +E
Sbjct: 23 AYRSPVELLTDLQLDPAEFGQGLEARRLFPMLVPKAFAAAMRPGDAQDPLLRQVLPVGDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DPIG+ P+ G++H+Y R+LL L C V CR+CFRR + +
Sbjct: 83 FLVADGFGPDPIGEQ-DGPMPGLLHKYQSRVLLMLRTGCAVNCRYCFRRHFPYADHK--V 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + A YI ++I E++ +GGDPL+ L +++ + H++ LR H+R+P+
Sbjct: 140 GAAELAQAHEYIASDTRINELLLSGGDPLMARDDHLAELVARFSDLPHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI +L+ L +A V + +H NHP E E +A ++RL AG+ LL+Q+VLLKG
Sbjct: 200 VLPSRITDQLVSLLADAPWRVVMVLHINHPNELQPELVAGLARLKAAGVTLLNQAVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L L + + PYYLH D AG +HF + + + ++A +++ G
Sbjct: 260 VNDHADTLVALAEGLFDAGVLPYYLHLLDRVAGAAHFEVDEDRARALMAEQLQRLPGFLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P + ++ G K ID
Sbjct: 320 PRLVREIAGEASKTPID 336
>gi|90416321|ref|ZP_01224253.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium
HTCC2207]
gi|90332046|gb|EAS47260.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium
HTCC2207]
Length = 341
Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 166/322 (51%), Gaps = 3/322 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+QL + +TS L + + EQ+ ++ + +++ + + P NP DP+ Q
Sbjct: 22 VQL-SQAVTSIDQLLSCLDLTIEQLSTSQQAAAEFALKVPRPFIQRMQPGNPKDPLLLQV 80
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E+ P+ +DP+ ++ H+P+ GIVH+Y +R+LL + C + CR+CFRR
Sbjct: 81 LPVAAEMVPSPDYNQDPLEESKHNPIAGIVHKYANRLLLVISPACAINCRYCFRRHFPYD 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ S + + AL YI+ I EVI++GGDPL + L + + I H++ LR
Sbjct: 141 ENRQ--SKQQWQTALDYIRNDKSINEVIYSGGDPLAANDTFLSWLTSEIADIAHIKRLRI 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+R+P+V P RI+ + + +H NH E ++ AI +L AG+ +L+Q
Sbjct: 199 HTRLPVVIPARIDQGFLNWATATRLKPIVVLHINHANEIDDDVAEAIRKLTGAGMQVLNQ 258
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND LA+L + + PYYLH D AG HF L +++ L+
Sbjct: 259 SVLLRGINDSAVTLADLSERLFDCGVTPYYLHLCDPVAGAQHFDLDETTAKQLYGQLQTL 318
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
+ G P + ++P K I
Sbjct: 319 LPGFLVPKLVREIPDRESKTLI 340
>gi|15615505|ref|NP_243809.1| hypothetical protein BH2943 [Bacillus halodurans C-125]
gi|10175565|dbj|BAB06662.1| BH2943 [Bacillus halodurans C-125]
Length = 393
Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats.
Identities = 114/349 (32%), Positives = 183/349 (52%), Gaps = 18/349 (5%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ K + + + I KE+ +++K+I++ + + +LI+ ++PNDPI + IP
Sbjct: 3 QPKYIMNVDKIEQ---IPKEEREKLKQITDKFVFRVNDYYLSLIDWNDPNDPIRKLVIPN 59
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ EL R D ++ + + G H+Y LL VC YCR+CFR+ + +
Sbjct: 60 EGEL--SEYGRWDASDEDTNYVVPGCQHKYETTALLICSEVCGAYCRYCFRKRLFRNDVK 117
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+S D + L YI + QI V+ TGGDPLIL+ K+L+ +++ LR I HV+I+R S+
Sbjct: 118 EAMS--DVDPGLDYIAQTPQINNVLLTGGDPLILATKKLRYIIERLRAIDHVKIIRIGSK 175
Query: 184 VPIVDPQRINP-----ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+P+ +P RI ELI+ +YI H NHP E + EA A L +AG I++
Sbjct: 176 LPVFNPMRITEDEQLLELIREYSTPDHRIYIMAHINHPVEITNEARQAFQALHDAGAIVV 235
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+ +LKGINDDP++LA L+ + PYY AG + F LT+EE IV K
Sbjct: 236 NQTPVLKGINDDPDVLAELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEVYNIVEKAK 295
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
K SGL + L + GK+++ + +G + H + +Y
Sbjct: 296 AKTSGLGKRVR-LSMSHTSGKIEV-----LAIEDGKAYLKYHQSRDGNY 338
>gi|269103626|ref|ZP_06156323.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163524|gb|EEZ42020.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 340
Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats.
Identities = 93/317 (29%), Positives = 155/317 (48%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L N I ++ +++ + + NP DP+ RQ +P ++E
Sbjct: 23 AISDPLKLLNLLKIDPTPWEKGLAARKLFALRVPMSFVERMEVGNPYDPLLRQVLPLEQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R+L+ + C + CR+CFRR
Sbjct: 83 FEVHAGYSTDPL-EEQDNDIPGLLHKYKNRVLMIVKGGCAINCRYCFRRHFPYQDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + +L YI ++ EVI +GGDPL+ L ++ + I H++ LR HSR+P+
Sbjct: 140 SKSVWQQSLDYIANHPELDEVILSGGDPLMAKDHELAWLMDGIEQIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ P+L Q + V + H NH E + E A+ L +A + LL+Q VLLKG
Sbjct: 200 VLPSRVTPDLCQRFASSRLQVILVTHINHCNEINAELTLAMQNLKHANVTLLNQGVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L NL + I PYYLH D G +HF + + + ++A L E +SG
Sbjct: 260 VNDSVQALINLSNRLFDAGILPYYLHVLDKVQGAAHFFVDDIQAKTLMAGLMENVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PQLTREIGGRSSKTPLD 336
>gi|329296403|ref|ZP_08253739.1| putative lysine aminomutase [Plautia stali symbiont]
Length = 342
Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 3/301 (0%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
++ E +++ + + N DP+ Q + ++E P DP+ + +
Sbjct: 39 AELAAGSEARRLFALRVPRAFIQRMQRGNAQDPLLLQVLTSRQEFTDAPGYSTDPLDEQS 98
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
S + G++H+Y +R +L + C V CR+CFRR + ++ +AA+ YI
Sbjct: 99 -SVVPGLLHKYKNRAMLLVKGGCAVNCRYCFRRHFPYQDNQG--NKRNWQAAIDYIAAHP 155
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
++ E+IF+GGDPL+ + L ++ L I H++ LR HSR+P+V P RI L Q L +
Sbjct: 156 ELDEIIFSGGDPLMAKDQELAWLIGALENIPHLKRLRIHSRLPVVIPARITEGLCQLLAD 215
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
V + H NH E E + RL AG+ LL+QSVLL+G+NDD + LA L
Sbjct: 216 TRLQVLLVSHINHAQEIDEALRERMQRLKRAGVTLLNQSVLLRGVNDDAQTLAQLSNALF 275
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ I PYYLH D G +HF + E+ + +V L +SG P ++ G K +
Sbjct: 276 DAGILPYYLHVLDKVQGAAHFFVPDEQARALVRQLLTMVSGYMVPKLAREIGGEPSKTPL 335
Query: 323 D 323
D
Sbjct: 336 D 336
>gi|303250421|ref|ZP_07336619.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252226|ref|ZP_07534123.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307261137|ref|ZP_07542814.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|302650747|gb|EFL80905.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860148|gb|EFM92164.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306869167|gb|EFN00967.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 333
Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 148/315 (46%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + + + +++ + A + + NDP+ Q +
Sbjct: 19 QAFNDPAALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR +
Sbjct: 79 EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDDVKS- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ +IL L E + PYYLH D G SHF + + +I L+ SG
Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAREPNKT 330
>gi|85058286|ref|YP_453988.1| hypothetical protein SG0308 [Sodalis glossinidius str. 'morsitans']
gi|84778806|dbj|BAE73583.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 342
Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats.
Identities = 101/317 (31%), Positives = 160/317 (50%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T L ++ + E E + + A + +P+DP+ RQ I +EE
Sbjct: 23 ITDPMQLLQLLRLEGHSGLREGAEARRLFPFRVPRAFAARMVTGDPDDPLLRQVITAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 83 FDPTPGYSTDPLDEQ-HSVVPGLLHKYQNRALMLVKGGCAVNCRYCFRRHFPYQENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + A AYI++ ++ E+I +GGDPL+ L +++ L I H++ LR HSR+P+
Sbjct: 140 NKTNWLRAAAYIRQHPELNEIILSGGDPLMAKDHELDELICLLEEIPHLKTLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L V + H NH E +++RL NA + LL+QSVLL+G
Sbjct: 200 VIPARITARLCQRLAGCRLKVVLVTHINHAREIDAALCDSMTRLRNARVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + LA L I PYYLH D G +HF + ++ ++I+ L EK+SG
Sbjct: 260 VNDSADTLAALSEALFAAGILPYYLHVLDRVQGAAHFMVEDKQAREIMQQLLEKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PRLAREIGGERSKTPLD 336
>gi|89902650|ref|YP_525121.1| hypothetical protein Rfer_3891 [Rhodoferax ferrireducens T118]
gi|89347387|gb|ABD71590.1| L-lysine 2,3-aminomutase [Rhodoferax ferrireducens T118]
Length = 393
Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats.
Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 10/328 (3%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK-EELNILPEEREDPIGDNNHS-PL 86
+ + ++IA+TP +A L++ +PN PI Q++P EE D +G+ + P
Sbjct: 55 ETVYKKFAIAITPYMAKLMDRDDPNCPIRLQYLPSHFEETKPGFATSLDQLGEEGDTVPG 114
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+VHRYP R+L + + C CRFC R+ MV G+V + + EA++ YI I +
Sbjct: 115 TSVVHRYPRRVLFLVSNTCATLCRFCTRKRMVSQPDGSV-AKDEIEASIDYIAGNQDIED 173
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
V+ +GGDP + +RL +L LR HV+ LR SR+ + P R+ PEL L++
Sbjct: 174 VLLSGGDPFTFTDERLDYILGELRRRAPHVRFLRIGSRMVVQMPTRVTPELCAVLEKHRV 233
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ + IH NHP E + + + AGI++ Q+V LKG+NDD ++ L +E+
Sbjct: 234 QM-VNIHINHPKEITPLLRERVKMIQKAGIMMGLQTVCLKGVNDDVAVMRELFMQTIEMG 292
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++PYY++ D+ G HF + ++ L+ ISG P +++D GG GK+ I
Sbjct: 293 VRPYYVYSTDMVEGAHHFIVPHRRMLELYEGLRGWISGPAIPTFVVDGLGGLGKLPITPS 352
Query: 326 NIKKVG-----NGSYCITDHHNIVHDYP 348
+++ + ++ + + P
Sbjct: 353 YVREEELPDGSGTTVKCRNYKGMTIEMP 380
>gi|329123649|ref|ZP_08252209.1| KamA family protein [Haemophilus aegyptius ATCC 11116]
gi|327469848|gb|EGF15313.1| KamA family protein [Haemophilus aegyptius ATCC 11116]
Length = 338
Score = 324 bits (832), Expect = 9e-87, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 155/318 (48%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMTKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+ +NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|323495128|ref|ZP_08100214.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546]
gi|323310629|gb|EGA63807.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546]
Length = 340
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 157/322 (48%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEQLEIDPTPWKNGFEARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + ++ + G++H+Y +R L+ + C + CR+CFRR +
Sbjct: 78 PLSEEFEVHQGYSNDPL-EEQNNAIPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYDE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L YIQ+ +I E+I +GGDPL+ L ++ + I+H++ LR H
Sbjct: 137 NKG--SKSVWQTSLDYIQQHPEIDEIILSGGDPLMAKDDELSWLVARIADIQHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI +L L + V + H NH E + A+ +L G+ LL+Q
Sbjct: 195 SRLPVVIPARITEQLTDLLGQTRLQVILVTHINHAQEIDQTLANALDKLKQVGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND L E + PYY+H D G +HF ++ ++ ++I+A + E+
Sbjct: 255 VMLKGVNDSVSSQIALSNALFEAGVLPYYMHVLDKVQGAAHFFISDQQAKEIMAGVLEQT 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREIGGRASKTPLD 336
>gi|126666938|ref|ZP_01737914.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17]
gi|126628654|gb|EAZ99275.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17]
Length = 350
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 102/323 (31%), Positives = 163/323 (50%), Gaps = 3/323 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ +L + EQ + +SI + + NPNDP+ RQ
Sbjct: 28 QILANSIDRPVELLERLGLCPEQWMAGADAGHLLFSIRVPEPFLARMEYGNPNDPLLRQV 87
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E L DP+ + + G++ +Y R LL + C + CR+CFRR
Sbjct: 88 LPLVDETRTLAGFVADPLAEADAMATTGLIRKYKSRALLMVTGQCAINCRYCFRRHFPYD 147
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
++ L +D + L + +I EVIF+GGDPL + K L + K L I H++ LR
Sbjct: 148 EQ--RLKPQDRQTVLDTLANSPEINEVIFSGGDPLAANDKLLAQWAKALEQIPHLRRLRI 205
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+R+P+V PQR+ L+Q ++ V + +H NHP E + + A+ RL AG+ LL+Q
Sbjct: 206 HTRLPVVIPQRVCDALLQWIRATRLRVVVVLHINHPAEIDQATVQALQRLTEAGVTLLNQ 265
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SV+L+G+ND ++L L + + PYYLH D AG HF + E + + L E+
Sbjct: 266 SVILRGVNDSVDVLEQLSEQLFDAGVLPYYLHAFDPVAGAHHFAVPDSEAKALTRELLER 325
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+ G P + +LPG K +D
Sbjct: 326 LPGFLVPRLVRELPGAGSKTPLD 348
>gi|77166085|ref|YP_344610.1| hypothetical protein Noc_2627 [Nitrosococcus oceani ATCC 19707]
gi|254435948|ref|ZP_05049455.1| KamA family protein [Nitrosococcus oceani AFC27]
gi|76884399|gb|ABA59080.1| L-lysine 2,3-aminomutase [Nitrosococcus oceani ATCC 19707]
gi|207089059|gb|EDZ66331.1| KamA family protein [Nitrosococcus oceani AFC27]
Length = 335
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 160/317 (50%), Gaps = 2/317 (0%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ + + Q+L + + + + + + +PNDP+ RQ P
Sbjct: 19 SQAVRNPQELLELTGLDNHPQIASEATRRQFPLRVPRSYIARMKKGDPNDPLFRQVFPLH 78
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E I P DP+GD P G++ +Y R+LL C ++CR+CFRR
Sbjct: 79 AEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCRYCFRRHFPYGDH-- 136
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + + AL YI + I EVI +GGDPL L+ RL ++ +TL I HV+ LR H+R+
Sbjct: 137 NPAQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLATISHVKRLRIHTRL 196
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P+R++ L+Q L+ + IHANH E + AA++ L+ AG L +Q+VLL
Sbjct: 197 PVVLPERVDHHLLQWLEGTSLQKVVVIHANHVNELDDRVAAALNDLSRAGCRLFNQTVLL 256
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+GIND L++L + + PYYLH D G +HF + I Q++ +L+ ++ G
Sbjct: 257 RGINDKVSALSDLSEGLFDTGVLPYYLHLLDKVQGAAHFEVDIITAQRLHRTLRARLPGY 316
Query: 305 CQPFYILDLPGGYGKVK 321
P + + G K+
Sbjct: 317 LVPLLVQEQAGAPSKLP 333
>gi|311695405|gb|ADP98278.1| lysine 2,3-aminomutase YodO family protein [marine bacterium HP15]
Length = 346
Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 100/323 (30%), Positives = 162/323 (50%), Gaps = 3/323 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL +TS ++L + +E + ++ + I + N + NP DP+ RQ
Sbjct: 23 QLLSGAVTSPKELLRRLELPEEPWLAGAEQGHRLFQIRVPEPFLNRMEKGNPADPLLRQV 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E P DP+ ++ G++ +Y R LL + C + CR+CFRR
Sbjct: 83 LPLADEAGHAPGFVSDPLEESGAIATTGLIRKYRSRALLMVTGQCAINCRYCFRRHFPYD 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
++ LS D + + + +I EVIF+GGDPL ++ + L + + I H++ LR
Sbjct: 143 EQ--RLSPHDRQRVIDVLGASPEINEVIFSGGDPLAVNDRLLSQWASAISGIPHIRRLRL 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+R+P+V PQR+ EL++ L V I +H NHP E A+ L AG LL+Q
Sbjct: 201 HTRLPVVIPQRVCDELLKWLSTTPLQVVIVLHINHPAEIDGPTRRALGYLRAAGATLLNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SV+L+G+ND +L L T + + PYYLH D G HF ++ +E + +V L +
Sbjct: 261 SVILRGVNDRTAVLEELSETLFDAGVLPYYLHAFDPVTGAHHFDVSDDEARNLVRELLAR 320
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+ G P + + PG K I+
Sbjct: 321 LPGFLVPKLVREEPGKESKTPIN 343
>gi|251791935|ref|YP_003006655.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700]
gi|247533322|gb|ACS96568.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700]
Length = 339
Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 99/314 (31%), Positives = 152/314 (48%), Gaps = 3/314 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
++ + L + E + E +++ + + NP DP+ Q + +E
Sbjct: 24 ISDPKILLQHLELPFEPFKQDIEARKLFAMRVPMPFVEKMEKGNPKDPLFLQVMSSADEF 83
Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + N + + I+H+Y +R+L + C V CR+CFRR +
Sbjct: 84 LQAEGFSKDPLEEQNDKNVVSNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYEENKG-- 141
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI + +I EVIF+GGDPL+ L ++K L I H++ LR HSR+P+
Sbjct: 142 TKQNWQTALQYIAQHPEIEEVIFSGGDPLMAKDHELGWLIKHLENIPHLKRLRIHSRLPV 201
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L L E + H NH E E+ A+ +L N G++LL+QSVLLK
Sbjct: 202 VIPQRITDALCAMLAETRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 261
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD IL L + I PYYLH D G +HF L + I L+ SG
Sbjct: 262 VNDDAYILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALSIYKQLQRITSGYLV 321
Query: 307 PFYILDLPGGYGKV 320
P ++ G K
Sbjct: 322 PKLAREIGGEPNKT 335
>gi|148269938|ref|YP_001244398.1| lysine 2,3-aminomutase YodO family protein [Thermotoga petrophila
RKU-1]
gi|147735482|gb|ABQ46822.1| L-lysine 2,3-aminomutase [Thermotoga petrophila RKU-1]
Length = 365
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 110/348 (31%), Positives = 185/348 (53%), Gaps = 24/348 (6%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
M++++ T +T + L E+ + +K I Y +LI+ +P+DPI +
Sbjct: 1 MKVKYYTSITQVEQL------SPEERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKI 54
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ +
Sbjct: 55 VVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R
Sbjct: 113 NVGAEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVQIIR 170
Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234
S++P +P RI +PEL++ +++ K +Y+ NHP E +EEAI A++ L +AG
Sbjct: 171 IGSKIPAFNPYRIIDDPELLRMIRKYSTKEKKIYVMTQFNHPKELTEEAIEAVNLLKDAG 230
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+L +Q+ LL+GIND PE L L+ + + PYY+ +G F + IEEG +I
Sbjct: 231 AVLCNQTPLLRGINDSPETLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290
Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
ISG+ + Y+ + GK++I + H
Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI-----AALTKNFIVFKYHR 331
>gi|167854986|ref|ZP_02477761.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755]
gi|167853943|gb|EDS25182.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755]
Length = 337
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 3/320 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q + +DL N + ++ +++ + A + + DP+ Q
Sbjct: 15 LQDLAEAFNRPEDLLNYLELNIADFEQDLTARKLFALRVPRPFAEKMKKGDRADPLFLQA 74
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
I +EE + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR
Sbjct: 75 ITLQEEFTNVDGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPYD 133
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + +L YI+ S++ EVI +GGDPL+ + + L I H+ +R
Sbjct: 134 EVKS--GKATWQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQLEQISHINTVRI 191
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL + L ++ V + H NH E + + +L + ++LL+Q
Sbjct: 192 HSRLPVVIPNRITDELCERLLQSRLKVVLVTHINHANEIDDIFAEKMQKLKQSNVVLLNQ 251
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND+ + L L I PYYLH D AG SHF + +I L+
Sbjct: 252 SVLLKGINDNAQTLKALSDKLFRNGILPYYLHLLDKVAGASHFYIEDSRAFEIYRELQRI 311
Query: 301 ISGLCQPFYILDLPGGYGKV 320
SG P ++ K
Sbjct: 312 TSGYLVPKLAREMAKEPNKT 331
>gi|149910194|ref|ZP_01898840.1| hypothetical protein PE36_23316 [Moritella sp. PE36]
gi|149806780|gb|EDM66744.1| hypothetical protein PE36_23316 [Moritella sp. PE36]
Length = 337
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 93/316 (29%), Positives = 163/316 (51%), Gaps = 3/316 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ + L + + + + + + + NP DP+ Q +P+++E
Sbjct: 23 AISDPRKLLFILELPEVSFQSDFAARQLFPMRVPQSFVDRMEKGNPKDPLFLQVMPKQQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ ++ + G++H+Y +R+L + C + CR+CFRR
Sbjct: 83 FIQQAGFIKDPLDEHEA-VVPGLLHKYTNRVLFIVRGGCAINCRYCFRRHFPYQDNSN-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + A+ YI+ K +I EVIF+GGDPL+ + ++L ++ L I H++ LR H+R+P+
Sbjct: 140 NKHEWQQAIDYIRAKPEIIEVIFSGGDPLMANDEQLGWLVAQLEQIPHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ EL+ LK++ + +H NHP E + E AA+++ AGI L +Q+VLL
Sbjct: 200 VMPTRVTDELVTLLKQSSLRCSVVLHINHPNELAAELPAALAKFTTAGISLYNQAVLLAD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ + L L + RI+PYYLH D G SHF + E+ I+ L ++ G
Sbjct: 260 INDNADDLVELHERLFDNRIQPYYLHLLDKVEGASHFDVPEEKAVAIMNELLLRLPGFLV 319
Query: 307 PFYILDLPGGYGKVKI 322
P + ++ G K I
Sbjct: 320 PKLVREIGGEKSKTPI 335
>gi|188535099|ref|YP_001908896.1| hypothetical protein ETA_29810 [Erwinia tasmaniensis Et1/99]
gi|188030141|emb|CAO98027.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
Length = 342
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 96/294 (32%), Positives = 154/294 (52%), Gaps = 3/294 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+ +++ + A + +P DP+ Q I ++E P DP+ + + S + G+
Sbjct: 46 DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ L ++ L +I H++ LR HSR+P+V P+RI L Q L ++ +
Sbjct: 163 SGGDPLMAKDHELDWLIAQLEHIPHIKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NH E +E + L AG+ LL+QSVLL+ INDD LA L + I PY
Sbjct: 223 VTHINHAQEIDDELRHGMRMLKRAGVTLLNQSVLLRDINDDAVTLAALSNALFDAGILPY 282
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
YLH D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTNVSGYMVPKLAREIGGEPSKTPLD 336
>gi|221133998|ref|ZP_03560303.1| lysine 2;3-aminomutase [Glaciecola sp. HTCC2999]
Length = 351
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 97/320 (30%), Positives = 162/320 (50%), Gaps = 6/320 (1%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
S L N E + + +++ + +L+ ++ +DP+ +Q +P +E
Sbjct: 28 FNSPDSLLNYLGFNASDFAEDHKARSLFALRVPRFFVDLMARNDLDDPLLKQVMPVADEF 87
Query: 68 NILPEEREDPI----GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ PE DP+ + ++ KG++H+Y +R+LL L C V CR+CFRR Q
Sbjct: 88 IVDPEFSLDPLKEQVNETTNTSTKGMLHKYQNRVLLMLRGGCAVNCRYCFRRHFPYDQHH 147
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ +D +I+ +I EVI +GGDPL+ + + + L I ++ +R H+R
Sbjct: 148 N--NKQDWLDVFEHIKTDPKIDEVILSGGDPLMANDDYMAWICAQLETIPSIKRIRLHTR 205
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+P+V P R+ PEL+ L ++ K + +H NHP E S E I ++ L AG+ +L+Q+VL
Sbjct: 206 LPVVLPYRVTPELLIALAQSSKQTIMVLHINHPKEISSELIQKVALLHEAGVTVLNQAVL 265
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
LKGIND L RI+PYYLH D G +HF ++ + I+ + K SG
Sbjct: 266 LKGINDSAHTQIALNEALFSARIQPYYLHMFDKVQGAAHFAISDKRAVNIMREVLTKQSG 325
Query: 304 LCQPFYILDLPGGYGKVKID 323
P + ++ G K +D
Sbjct: 326 YMVPKLVREIGGESSKTPVD 345
>gi|52424562|ref|YP_087699.1| KamA protein [Mannheimia succiniciproducens MBEL55E]
gi|52306614|gb|AAU37114.1| KamA protein [Mannheimia succiniciproducens MBEL55E]
Length = 336
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 95/320 (29%), Positives = 155/320 (48%), Gaps = 3/320 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+++ +++ + L + ++ ++ +++ + + N DP+ Q
Sbjct: 16 LEILANSISDPEVLLKTLSLPIDKFEKDIHARKLFAMRVPLPFVRKMELGNAQDPLFLQA 75
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ +E +DP+ + I+H+Y +R+LL + C + CR+CFRR +
Sbjct: 76 MSSADEFLTADGFSKDPL-EEQQVVAPNILHKYKNRLLLMVKGGCAINCRYCFRRHFPYA 134
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + AL YI QI EVIF+GGDPL+ L ++K L I H+Q LR
Sbjct: 135 DNQG--NKANWQKALDYISANPQIEEVIFSGGDPLMAKDHELDWLIKKLEKIPHLQRLRI 192
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+R+P+V PQRI + L E+ + H NH E E+ A+++L NAG++LL+Q
Sbjct: 193 HTRLPVVIPQRITGAFCKILTESRLNTVLVTHINHGNEIDEQLTRALNKLKNAGVVLLNQ 252
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLK IND+ + L NL I PYYLH D G SHF + + +I L+
Sbjct: 253 SVLLKNINDNAQTLKNLSDKLFRAGILPYYLHLLDKVEGASHFYVPDQRAVEIYRELQSL 312
Query: 301 ISGLCQPFYILDLPGGYGKV 320
SG P ++ K
Sbjct: 313 TSGYLVPKLAREIAHEPNKT 332
>gi|261492016|ref|ZP_05988591.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494571|ref|ZP_05991053.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261309762|gb|EEY10983.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312299|gb|EEY13427.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 330
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 100/327 (30%), Positives = 159/327 (48%), Gaps = 10/327 (3%)
Query: 1 MQLRHKTLT-------SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN 53
+Q++ + LT + DL + + +++ + + A + NPN
Sbjct: 4 IQIKPRWLTELAQAFNNPIDLLQFLELNPNDFEGDIAARKLFALRVPRMFAEKMEKGNPN 63
Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
DP+ Q + + E DP+ + SP I+H+Y +R+L L + C + CR+CF
Sbjct: 64 DPLFLQAMSLQAEFIEAEGFVVDPL-EEQQSPAPNILHKYHNRLLFMLKNSCAINCRYCF 122
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
RR + + + L YI E ++ EVI +GGDPL+ + L +L L I
Sbjct: 123 RRHFPYEEVKS--GKAVWQQGLTYIAEHPELEEVILSGGDPLMAKDQDLDWILTQLEQIS 180
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
H++ LR HSR+P+V P RI EL + L ++ V + H NH E +++L A
Sbjct: 181 HIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLVTHINHANEIDAVFANKMAQLKKA 240
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
G++LL+QSV+LKG+ND+ + L L E I PYYLH D AG SHF + E+ +I
Sbjct: 241 GVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPYYLHLFDKVAGASHFYIEDEQAGEI 300
Query: 294 VASLKEKISGLCQPFYILDLPGGYGKV 320
L+ SG P ++ K+
Sbjct: 301 YRELQRITSGYLVPKLAREIAKEPNKI 327
>gi|240949712|ref|ZP_04754047.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305]
gi|240295970|gb|EER46646.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305]
Length = 333
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 93/315 (29%), Positives = 146/315 (46%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + ++ ++ +++ + A + + NDP+ Q +
Sbjct: 19 QAFNDPVALLEYLELNPQEFEQAILARKLFAMRVPRPFAERMQKGDKNDPLFLQAMTSSA 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR +
Sbjct: 79 EFTQVEGFTKDPLDEQ-HSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPYEDVKS- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ +L YI E +I EVI +GGDPL+ + L +L L I HV+ LR H+R+P
Sbjct: 137 -GKSAWQQSLQYIAEHPEIEEVILSGGDPLMAKDEELDWILTALEKITHVKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L ++ V + H NH E I++L A +ILL+QSVLLK
Sbjct: 196 VVIPNRITAQLCLRFADSRLNVVMVTHINHANEIDAVLANKIAKLKQADVILLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND L L + I PYYLH D G SHF + E I L++ SG
Sbjct: 256 GVNDSAITLKVLSDKLFSIGILPYYLHLLDKVEGASHFFVEDEIAFSIYKELQKISSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAKEPNKT 330
>gi|54310450|ref|YP_131470.1| hypothetical protein PBPRA3383 [Photobacterium profundum SS9]
gi|46914891|emb|CAG21668.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 357
Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 153/317 (48%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L I ++ +++ + + + NP DP+ RQ +P + E
Sbjct: 40 AISDPFLLLKTLKIDPIPWEKGLAARKLFALRVPMSFVDRMEIGNPYDPLLRQVLPLEPE 99
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R L+ + C V CR+CFRR S
Sbjct: 100 FEVHDGYSLDPLKEQ-DNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPYSDNKG-- 156
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ AL YI E ++ EVI +GGDPL+ L ++ + I H++ LR H+R+P+
Sbjct: 157 GKTQWKKALNYIAEHPELNEVILSGGDPLMAKDHELAWLVDEIESIPHIKRLRIHTRLPV 216
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL + + + H NH E ++E A+++L + LL+Q VLL+G
Sbjct: 217 VIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTKLKRVNVTLLNQGVLLRG 276
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND E L L + I+PYYLH D G +HF + E + ++A L + +SG
Sbjct: 277 INDSVEALTALSESLFTAGIQPYYLHVLDKVQGAAHFMIDDTEARHLMAGLMQNVSGYMV 336
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 337 PKLTREIGGRTSKTPLD 353
>gi|90413354|ref|ZP_01221347.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK]
gi|90325596|gb|EAS42065.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK]
Length = 340
Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 153/317 (48%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L I ++ +++ + + + NP DP+ RQ +P + E
Sbjct: 23 AISDPFLLLKTLKIDPTPWEKGLAARKLFALRVPMSFVDRMEIGNPYDPLLRQILPLEPE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 83 FEVHDGYSLDPL-EEQDNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPYNDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ AL YI E ++ EVI +GGDPL+ L ++ + I H++ LR H+R+P+
Sbjct: 140 GKAQWKVALTYIAEHPELNEVILSGGDPLMAKDHELAWLVDEIESISHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL + + + H NH E ++E A+++L LL+Q VLL+G
Sbjct: 200 VIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTKLKRVNATLLNQGVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND + L +L I+PYYLH D G +HF + E ++++A L + +SG
Sbjct: 260 INDSVDALTSLSEALFTAGIQPYYLHVLDKVQGATHFMVDDTEARQLMAGLMQNVSGYMV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PKLTREIGGRASKTPLD 336
>gi|124485170|ref|YP_001029786.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
gi|124362711|gb|ABN06519.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
Length = 368
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 100/344 (29%), Positives = 166/344 (48%), Gaps = 15/344 (4%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++ K +TS L N + ++ + ++ +++ + +LI+ + DPI +P
Sbjct: 1 MKPKYITSISALDNLVGLAPKEREMMERVTDVFPFRANDYYLSLIDWKDRRDPIRAIIVP 60
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL DP + +++ G+ H+Y LL L VC CRFCFR+ + S +
Sbjct: 61 DPRELE--SGGSNDPSCEKDYTKKPGLQHKYDQTGLLLLTDVCGGICRFCFRKRLFMSCE 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ +D +AYI+E ++I V+ TGGDPL L + L+ VL+ LR I HV I+R S
Sbjct: 119 RETV--RDVSENIAYIREHTEITNVLLTGGDPLTLDTRHLESVLRELREIPHVSIIRIGS 176
Query: 183 RVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
++ +P RI + EL+ L P +Y+ H NHP E ++ +I A L A +I+
Sbjct: 177 KMLAYNPYRILNDAELLSVLSRYSTPEKRIYLMAHFNHPNEITDVSIQAAEALQKADVIV 236
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
++Q+ +L GIN + E L L R I PYY+ A G F++ +EE IV
Sbjct: 237 VNQTPILNGINAESETLTTLFRKLSFAGIAPYYVFQCRPATGNGLFQVPVEESYDIVQGA 296
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ SGL + + + GKV++ + + H
Sbjct: 297 WKNCSGLAKRARFI-MSHSTGKVEV-----VGKDAENIFMRYHQ 334
>gi|223041468|ref|ZP_03611671.1| hypothetical protein AM202_0087 [Actinobacillus minor 202]
gi|223017726|gb|EEF16133.1| hypothetical protein AM202_0087 [Actinobacillus minor 202]
Length = 333
Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 145/315 (46%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + + ++ +++ + A + + NDP+ Q +
Sbjct: 19 QAFNDPVALLEYLELNPREFEQAILARKLFAMRVPRPFAEKMQKGDKNDPLFLQAMTSSS 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR +
Sbjct: 79 EFTQVEGFIKDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPYEDVKS- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ +L YI E +I EVI +GGDPL+ + L +L L I HV+ LR H+R+P
Sbjct: 137 -GKTVWQQSLQYIAEHPEIEEVILSGGDPLMAKDEELDWILTALEKINHVKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L ++ V + H NH E ++ L +G++LL+QSVLLK
Sbjct: 196 VVIPNRITSQLCLRFADSRLNVVMVTHINHANEIDTVLANKMAELKQSGVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND L L + I PYYLH D G SHF + E I L++ SG
Sbjct: 256 GVNDSAITLKALSDKLFSIGILPYYLHLLDKVEGASHFFVEDEVAFSIYKELQKISSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAKEPNKT 330
>gi|254362093|ref|ZP_04978215.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213]
gi|153093652|gb|EDN74611.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213]
Length = 330
Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats.
Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + DL + + +++ + + A + NPNDP+ Q + +
Sbjct: 16 QAFNNPIDLLQFLELNPNDFEGDIAARKLFALRVPRMFAEKMEKGNPNDPLFLQAMSLQA 75
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E DP+ + SP I+H+Y +R+L L + C + CR+CFRR + +
Sbjct: 76 EFIEAEGFVVDPL-EEQQSPAPNILHKYHNRLLFMLKNSCAINCRYCFRRHFPYEEVKS- 133
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI E ++ EVI +GGDPL+ + L +L L I H++ LR HSR+P
Sbjct: 134 -GKAVWQQGLTYIAEHPELEEVILSGGDPLMAKDQDLDWILTQLEQISHIKTLRIHSRLP 192
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI EL + L ++ V + H NH E +++L AG++LL+QSV+LK
Sbjct: 193 VVIPNRITTELCERLSKSRLNVVLVTHINHANEIDAVFANKMAQLKKAGVVLLNQSVMLK 252
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L L E I PYYLH D AG SHF + E+ +I L+ SG
Sbjct: 253 GVNDNAQTLKRLSDKLFEYGILPYYLHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYL 312
Query: 306 QPFYILDLPGGYGKV 320
P ++ K+
Sbjct: 313 VPKLAREIAKEPNKI 327
>gi|219870442|ref|YP_002474817.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis
SH0165]
gi|219690646|gb|ACL31869.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis
SH0165]
Length = 337
Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 153/320 (47%), Gaps = 3/320 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q ++ +DL N + ++ +++ + A + + DP+ Q
Sbjct: 15 LQDLAESFNRPEDLLNYLELNIADFEQDLTARKLFALRVPRPFAEKMKKEDRADPLFLQA 74
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
I +EE + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR
Sbjct: 75 ITLQEEFTNVDGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPYD 133
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + +L YI+ S++ EVI +GGDPL+ + + L I H+ +R
Sbjct: 134 EVKS--GKATWQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQLEQISHINTVRI 191
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI EL + L ++ V + H NH E + + +L + ++LL+Q
Sbjct: 192 HSRLPVVIPNRITDELCERLSQSRLKVVLVTHINHANEIDKIFAEKMQKLKQSNVVLLNQ 251
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND+ + L L I PYYLH D AG SHF + +I L+
Sbjct: 252 SVLLKGINDNAQTLKALSDKLFRYGILPYYLHLLDKVAGASHFYIEDSRAFEIYRELQRI 311
Query: 301 ISGLCQPFYILDLPGGYGKV 320
SG P ++ K
Sbjct: 312 TSGYLVPKLAREMAKEPNKT 331
>gi|296100915|ref|YP_003611061.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295055374|gb|ADF60112.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 342
Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 163/300 (54%), Gaps = 3/300 (1%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
+ +E +++ + + NP+DP+ +Q + +EE P DP+ + +
Sbjct: 40 DLLAGREAKRLFALRVPRAFVARMEKGNPDDPLLKQTLTAQEEFITAPGYSTDPL-EEQN 98
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
S + G++H+Y +R LL + C V CR+CFRR ++ + ++ + AL YI S+
Sbjct: 99 SVVPGLLHKYLNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALDYIAAHSE 156
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ E+IF+GGDPL+ L +L L I H++ LR HSR+PIV P RI L+ L+++
Sbjct: 157 LDEIIFSGGDPLMAKDYELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDGLVSRLEQS 216
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
V + H NH E + AA+ RL AG+ LL+QSVLL+G+ND+ +LA+L +
Sbjct: 217 RLQVLLVNHINHANEIDDAFRAAMVRLRKAGVTLLNQSVLLRGVNDNARVLADLSNALFD 276
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ PYYLH D G +HF +T EE ++IV L +SG P ++ G K +D
Sbjct: 277 AGVMPYYLHVLDRVQGAAHFMVTDEEARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLD 336
>gi|261254094|ref|ZP_05946667.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891]
gi|260937485|gb|EEX93474.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891]
Length = 340
Score = 321 bits (824), Expect = 8e-86, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 162/322 (50%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEELEIDPTPWQSGFDARKLFAQRVPQSFVDRMEKGNPFDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE I DP+ + N+S + G++H+Y +R L+ + C + CR+CFRR +
Sbjct: 78 PLSEEFEIHEGYSNDPLEEQNNS-IPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPYDE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YIQ+ +I EVI +GGDPL+ + L ++ + I H++ LR H
Sbjct: 137 NKS--SKSVWQQSLDYIQQHPEIDEVILSGGDPLMAKDEELNWLVNHIADIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI P L L+ + H NH E +E +++ L AG+ LL+Q
Sbjct: 195 SRLPVVIPARITPALANLLENTRLQTILVTHINHAQEIHQELRDSLTTLKRAGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND + L + + + PYY+H D G +HF ++ ++ + I+A + EK+
Sbjct: 255 VMLKGVNDSIDDQVTLSQALFDAGVLPYYMHVLDKVQGAAHFFISDQQAKIIMAGVMEKV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREIGGRASKTPLD 336
>gi|150020902|ref|YP_001306256.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
gi|149793423|gb|ABR30871.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
Length = 370
Score = 321 bits (824), Expect = 8e-86, Method: Composition-based stats.
Identities = 107/331 (32%), Positives = 176/331 (53%), Gaps = 15/331 (4%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
+ + + +++ E+K+++ Y +LIN +PNDPI + IPQ EEL
Sbjct: 9 IEKVDQLTEKEKQELKKVTEKYKFRANDYYLSLINWEDPNDPIRKLIIPQLEELEE--WG 66
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
+ D + +++ KG+ H+Y D LL + VC +CRFCFR+ + + V +D
Sbjct: 67 KLDASNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINIGEEVA--RDVTE 124
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI- 192
L YI++ +I V+ TGGDPL+LS K+L+K++ +R I+HVQI+R S++ +P RI
Sbjct: 125 DLEYIKKHKEITNVLLTGGDPLLLSTKKLEKIISQIREIEHVQIIRIGSKMVAFNPYRII 184
Query: 193 -NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
+PELI+ +K+ K +YI NHP E +E+AI A++ L AG IL +Q+ L+KG+N
Sbjct: 185 EDPELIELIKKYSTNEKKIYIMTQFNHPRELTEQAIIAVNMLQKAGAILANQTPLIKGVN 244
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
DD + L L + + + PYY+ AG F + +EEG +I +SGL +
Sbjct: 245 DDWKTLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEGYQIFLKAIMNVSGLAKRA 304
Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
+ GK+++ +
Sbjct: 305 RFA-MSHETGKIEVS-----ALTKEHIIFRY 329
>gi|239827150|ref|YP_002949774.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70]
gi|239807443|gb|ACS24508.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70]
Length = 379
Score = 321 bits (824), Expect = 9e-86, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 188/345 (54%), Gaps = 18/345 (5%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ K +T+ + + I KE+ +++KEI+N + + NLIN +PNDPI + IP
Sbjct: 4 QPKYITNIEKITQ---IPKEEREKLKEITNKFVFRVNDYYLNLINWDDPNDPIRKLVIPN 60
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ ELN D + + + G H+Y LL + VC YCRFCFR+ + +
Sbjct: 61 EGELNE--YGSWDASDEAANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRNDVK 118
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+S D + YI + +I V+ TGGD LIL+ K+++ +++ LR I HV+I+RF S+
Sbjct: 119 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKKIRYIVERLRAIDHVKIIRFGSK 176
Query: 184 VPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+P+ +P RI + EL+ ++ P +Y+ H NHP E +EEA A L +AG+I++
Sbjct: 177 LPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVV 236
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+ +LKGINDDPE+LA L+ + PYY AG S F LT+EE KIV K
Sbjct: 237 NQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEEVYKIVEQAK 296
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
+ SGL + ++ + GK++I + NG + H +
Sbjct: 297 ARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQSR 335
>gi|260774695|ref|ZP_05883599.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609351|gb|EEX35502.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450]
Length = 340
Score = 321 bits (824), Expect = 9e-86, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 163/322 (50%), Gaps = 4/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ + L I E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPEKLLLQLEIDPSPWQSGFEARKLFAQRVPQSFVDRMEKGNPFDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE ++ DP+ + + + G++H+Y +R L+ + C + CR+CFRR ++
Sbjct: 78 PLSEEFDVHSGYSTDPLDEQ-DNQVPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYNE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ +L Y+++ ++ E+I +GGDPL+ + LQ ++ + I+H++ LR H
Sbjct: 137 NKG--NKSVWSQSLDYVRQHPELNEIILSGGDPLMAKDEELQWLIGQIADIQHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI + L V + H NH E ++E A+S L G+ LL+Q
Sbjct: 195 SRLPVVIPARITTTFTKLLAGTRLQVILVTHINHANEINQELRDALSSLRREGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND E L + + + PYY+H D G +HF ++ ++ ++I+A + E++
Sbjct: 255 VMLKGVNDSVEAQVALSESLFDAGVLPYYIHVLDKVQGAAHFFISDQQAKQIMAGVIERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREIGGRASKTPLD 336
>gi|307249881|ref|ZP_07531855.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306858070|gb|EFM90152.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 333
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + ++ + +++ + + + NDP+ Q + E
Sbjct: 19 QAFNDPITLLEHLELNPKEFETAITARKLFALRVPRPFVEKMQKGDKNDPLFLQAMSAAE 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR +
Sbjct: 79 EFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDDVKS- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ +IL L E + PYYLH D G SHF + + +I L+ SG
Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAREPNKT 330
>gi|145628680|ref|ZP_01784480.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21]
gi|144979150|gb|EDJ88836.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21]
Length = 309
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 101/306 (33%), Positives = 148/306 (48%), Gaps = 2/306 (0%)
Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER 74
A + K+ ++ +S+ + + I NP DP+ Q + E
Sbjct: 2 LKALNLPKDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMCSDLEFVQAEGFS 61
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
DP+ + N + + I+H+Y +R+L C V CR+CFRR + + K + A
Sbjct: 62 TDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDENPG--NKKSWQLA 119
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
L YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+R+P+V PQRI
Sbjct: 120 LDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHTRLPVVIPQRITD 179
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
E L E + H NHP E + A+ +L + LL+QSVLLKG+NDD +IL
Sbjct: 180 EFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSVLLKGVNDDAQIL 239
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
L + I PYYLH D G SHF ++ E +I +L+ SG P ++
Sbjct: 240 KILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTSGYLVPKLAREIA 299
Query: 315 GGYGKV 320
G K
Sbjct: 300 GEPNKT 305
>gi|307256695|ref|ZP_07538474.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306864743|gb|EFM96647.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 333
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + ++ + +++ + + + NDP+ Q + E
Sbjct: 19 QAFNDPTALLEYLELNPKEFETAITARKLFALRVPRPFVEKMRKGDKNDPLFLQAMSAAE 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + +
Sbjct: 79 EFLQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDNELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L L + + PYYLH D G SHF + + +I L+ SG
Sbjct: 256 GVNDNAQTLKALSDKLFDSGVLPYYLHLLDRVEGASHFFIEDRQAAEIYKELQRISSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAKEPNKT 330
>gi|71278705|ref|YP_267720.1| hypothetical protein CPS_0971 [Colwellia psychrerythraea 34H]
gi|71144445|gb|AAZ24918.1| conserved hypothetical protein TIGR00238 [Colwellia psychrerythraea
34H]
Length = 342
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 96/316 (30%), Positives = 162/316 (51%), Gaps = 3/316 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T + L I + + + + + + + + +DP+ +Q +P E
Sbjct: 28 VTEPEKLLTLLNIAPDDYLQHFKARKLFPVRVPLSFIKRMKKGDFDDPLLKQVMPLSSEF 87
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ DP+ + + + +G++H+Y R+L+ + C + CR+CFRR +
Sbjct: 88 LLSDGYTADPLNE-HDTVAEGLLHKYKSRVLMIVKTACAINCRYCFRRHFPYQDN--SPN 144
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
K ++AL YI ++I EVIF+GGDPL+ + L +++ + I HV LR HSR+P+V
Sbjct: 145 KKRWQSALDYIAAHNEISEVIFSGGDPLMANDDHLAWLIEQIEQIPHVSRLRIHSRLPVV 204
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI +L+ LK + + +H NHP E ++E I A+ L A I L +QSVLL+GI
Sbjct: 205 IPNRITAKLVTLLKCSRLKATMVLHINHPNEINQELIEALEPLREARIPLFNQSVLLRGI 264
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDD ++L NL + I+PYYLH D G +HF + + IV ++ + G P
Sbjct: 265 NDDAQVLINLSEALFDAGIQPYYLHLFDAVQGAAHFDIAEADAVAIVKTMLASLPGFLMP 324
Query: 308 FYILDLPGGYGKVKID 323
+ ++ G K I+
Sbjct: 325 KLVREIAGQANKTPIN 340
>gi|53729180|ref|ZP_00134024.2| COG1509: Lysine 2,3-aminomutase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208156|ref|YP_001053381.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae L20]
gi|190149985|ref|YP_001968510.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303252405|ref|ZP_07338571.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247647|ref|ZP_07529688.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307263313|ref|ZP_07544931.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126096948|gb|ABN73776.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189915116|gb|ACE61368.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302648864|gb|EFL79054.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855815|gb|EFM87977.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306871375|gb|EFN03101.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 333
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 89/315 (28%), Positives = 148/315 (46%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + + + +++ + A + + NDP+ Q +
Sbjct: 19 QAFNDPTALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR +
Sbjct: 79 EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDDVKS- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L L + + PYYLH D G SHF + ++ +I L+ SG
Sbjct: 256 GVNDNAQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAREPNKT 330
>gi|312110886|ref|YP_003989202.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp.
Y4.1MC1]
gi|311215987|gb|ADP74591.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp.
Y4.1MC1]
Length = 378
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 118/345 (34%), Positives = 189/345 (54%), Gaps = 18/345 (5%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ K +T+ + + I KE+ +++K+I+N Y + NLIN +PNDPI + IP
Sbjct: 3 QPKYITNIEKITQ---IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPN 59
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ ELN D + + + G H+Y LL + VC YCRFCFR+ + S
Sbjct: 60 EGELNE--YGSWDASDEEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVK 117
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+S D + YI + +I V+ TGGD LIL+ K+++++++ LR I HV+I+RF S+
Sbjct: 118 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKKIRQIVERLRAIDHVKIIRFGSK 175
Query: 184 VPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+P+ +P RI + EL+ ++ P +Y+ H NHP E +EEA A L +AG+I++
Sbjct: 176 LPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVV 235
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+ +LKGINDDPE+LA L+ + PYY AG S F LT+E+ +IV K
Sbjct: 236 NQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEKVYQIVEQAK 295
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
+ SGL + ++ + GK++I + NG + H +
Sbjct: 296 ARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQSR 334
>gi|253576596|ref|ZP_04853924.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844010|gb|EES72030.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 389
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 101/340 (29%), Positives = 175/340 (51%), Gaps = 15/340 (4%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
D+ + + +++ E+K I++ + + NLI+ ++P DPI + IP EL
Sbjct: 9 DIAKVSQLSEQERQELKPITDKFVFRVNDYYLNLIDWNDPEDPIRKLVIPNTGELKE--Y 66
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
R D + + + G H+Y LL + VC YCR+CFR+ + + + D
Sbjct: 67 GRWDASDEAANYVVPGCQHKYRTTALLIVSEVCGSYCRYCFRKRLFRNDVKEAM--ADVT 124
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
+ YI + +I ++ TGGD LIL+ K+L+ +L+ LR I+HV+I+R S++P+ +P RI
Sbjct: 125 PGIEYIAQHPEINNILLTGGDSLILATKKLRSILERLRAIEHVKIIRLGSKIPVFNPMRI 184
Query: 193 --NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
+PEL+ ++E + +Y+ H NHP E + EA L +AG I+++Q+ +LKGI
Sbjct: 185 YEDPELLDLIREFSTVDQRIYVMAHINHPREITPEAKRGFQALHDAGAIVVNQTPILKGI 244
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDD +L L+ + PYY AG + F + ++ ++V K + SGL +
Sbjct: 245 NDDAAVLGELLDRLSWAGVTPYYFFINRPVAGNADFVIPLKRAYQLVEEAKARTSGLGKR 304
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
L + GK++I + NG + H + +Y
Sbjct: 305 VR-LSMSHSSGKIEI-----LAIENGQAYLKYHQSRDGEY 338
>gi|15642896|ref|NP_227937.1| hypothetical protein TM0121 [Thermotoga maritima MSB8]
gi|4980613|gb|AAD35215.1|AE001698_4 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 368
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 108/347 (31%), Positives = 185/347 (53%), Gaps = 20/347 (5%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
++L+ K TS + + E+ + +K + Y +LI+ +P+DPI +
Sbjct: 2 IRLKVKYYTSITQVEQ---LSPEERERLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKII 58
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ + +
Sbjct: 59 VPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFIN 116
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R
Sbjct: 117 VGAEVI--RDITPQLDYIRTHKEITNVLLTGGDPLLLSTEKLEKIVSSLREIDHVQIIRI 174
Query: 181 HSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
S++P +P RI +P+L++ +++ K +Y+ NHP E + EAI A++ L +AG
Sbjct: 175 GSKIPAFNPYRIIDDPDLLKMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGA 234
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
+L +Q+ LL+GINDDPE+L L+ + + PYY+ +G F + IEEG +I
Sbjct: 235 VLCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFT 294
Query: 296 SLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
ISG+ + Y+ + GK++I + H
Sbjct: 295 KAISNISGVAKRVRYV--MSHRTGKIEI-----AALTKDFIVFKYHR 334
>gi|297583799|ref|YP_003699579.1| lysine 2,3-aminomutase YodO family protein [Bacillus
selenitireducens MLS10]
gi|297142256|gb|ADH99013.1| lysine 2,3-aminomutase YodO family protein [Bacillus
selenitireducens MLS10]
Length = 386
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 103/339 (30%), Positives = 174/339 (51%), Gaps = 15/339 (4%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
+ + E+ ++K+I+ + + LI+ +P DPI + IP + EL
Sbjct: 10 IEKVPHLSDEEKAKLKQITEKFVFRVNEYYLGLIDWGDPKDPIRKLVIPNEGELEE--YG 67
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
R D ++ + + G H+Y + LL + VC YCR+CFR+ + + +S D +
Sbjct: 68 RWDASDEDTNYVVPGCQHKYDETALLIVSEVCGAYCRYCFRKRLFRNDIKEAMS--DVQP 125
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI- 192
+ YI+E +I V+ TGGD LIL+ K+L+ +++ LR I HV+I+R S++P+ +P RI
Sbjct: 126 GIDYIKEHPEISNVLLTGGDSLILATKKLRFIIEQLREIPHVKIIRLGSKMPVFNPMRIY 185
Query: 193 -NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
+ EL+ + E + +Y+ H NHP E + EA L NAG I+++Q+ +L+GIN
Sbjct: 186 EDQELLDLISEYSTTEQRIYVMAHINHPNEITPEAKKGFDALHNAGAIVVNQTPVLRGIN 245
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
DDP +L L+ + PYY AG + F L+++E IV K + SGL +
Sbjct: 246 DDPVVLGELLDQLSWAGVTPYYFFINRPVAGNNEFVLSLKEAYDIVEEAKARTSGLGKRV 305
Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
L + GK++I + +G + H + Y
Sbjct: 306 R-LSMSHTSGKIEI-----LAIDDGKAYLKYHQSRDGHY 338
>gi|121998759|ref|YP_001003546.1| lysine 2,3-aminomutase YodO family protein [Halorhodospira
halophila SL1]
gi|121590164|gb|ABM62744.1| L-lysine 2,3-aminomutase [Halorhodospira halophila SL1]
Length = 342
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 153/319 (47%), Gaps = 6/319 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ ++L + + + ++ + + + + I P +PNDP+ RQ +P E
Sbjct: 28 AIRQPEELLRRLDLPESLLAPAEQAARTFPMRVPVPYLARIRPGDPNDPLLRQVLPIGAE 87
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P DP+ + G++ +Y R LL C ++CR+CFRR +
Sbjct: 88 LETHPGYTADPLAEQGARTGSGVLQKYNGRSLLIATGGCAIHCRYCFRRCFPYN------ 141
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
AL +++ EVI +GGDPL+L + L L+ L I V+ +R H+R+P+
Sbjct: 142 REAGWRTALDQLEQHGAPEEVILSGGDPLLLDDQALGACLERLGRIAAVRRVRIHTRLPV 201
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ L + L + I +HANHP E E +A++RL N +L+Q+VLL+G
Sbjct: 202 VIPSRVTAALARHLGQIRLQSVIVVHANHPREIDAEVSSALARLRNVCSTVLNQTVLLRG 261
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD LA+L + PYYLH D AG +HF + + GQ++ A L + G
Sbjct: 262 VNDDTATLASLSERLFAADVLPYYLHLLDPVAGAAHFDVDAKTGQRLWAELARSLPGYLV 321
Query: 307 PFYILDLPGGYGKVKIDTH 325
P + PG K I
Sbjct: 322 PRLAREEPGAAAKTVITPD 340
>gi|165976091|ref|YP_001651684.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165876192|gb|ABY69240.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 333
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 89/315 (28%), Positives = 148/315 (46%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + + + +++ + A + + NDP+ Q +
Sbjct: 19 QAFNDPTALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR +
Sbjct: 79 EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDDVKS- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L L + + PYYLH D G SHF + ++ +I L+ SG
Sbjct: 256 GVNDNVQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAREPNKT 330
>gi|152994930|ref|YP_001339765.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1]
gi|150835854|gb|ABR69830.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1]
Length = 340
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 95/323 (29%), Positives = 164/323 (50%), Gaps = 2/323 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + LTS +L + K + E ++ + + + I N +DP+ Q +
Sbjct: 14 QHLSQALTSLPELIEHLGLPKNLAQQGIEAHQNFKLLVPRPYLSRIEYGNVHDPLLLQVL 73
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ + +DP+ + +H+P K IVH+Y R+L+ C V CR+CFRR +
Sbjct: 74 PSLAEMQKVAGYTKDPLEEADHNPQKAIVHKYKRRLLVITTGTCAVNCRYCFRRHFPYAD 133
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L+ + ++ + Y+++ +I EVI +GGDPL++ L ++ L + ++ LR H
Sbjct: 134 NQ--LAQAEWQSVIDYLKDHPEINEVILSGGDPLMMKDSLLADKVRKLEALPQIKRLRIH 191
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ ++++ +K + + + H NH E EE A +L +AG+ LL+Q
Sbjct: 192 SRLPVVIPNRVCDDMLEWIKVSRLDIVMVWHINHANEMDEELANAAYKLKSAGVTLLNQG 251
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND E NL I PYY+ D G +HF + IE+ Q+++ + ++
Sbjct: 252 VLLKGVNDSVEAQVNLSEAVFSAGILPYYMFTLDPVEGAAHFDIAIEDAQELMGKVAAEL 311
Query: 302 SGLCQPFYILDLPGGYGKVKIDT 324
G P ++PG K
Sbjct: 312 PGYLVPRLAKEIPGKPAKSVFAP 334
>gi|224370018|ref|YP_002604182.1| YodO [Desulfobacterium autotrophicum HRM2]
gi|223692735|gb|ACN16018.1| YodO [Desulfobacterium autotrophicum HRM2]
Length = 359
Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats.
Identities = 102/349 (29%), Positives = 175/349 (50%), Gaps = 13/349 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + + L E++ I + TP A L++P +P P+ RQ IP +EL
Sbjct: 12 INTPEKLRRIINPTPEELKAINTLDT--RWGTTPYFAALMDPDDPCCPVRRQIIPSLKEL 69
Query: 68 NILPEEREDPIGDNNHSPLK----GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ + N + I +Y DR+ + C YCR CFRRE+V Q+
Sbjct: 70 ENTYGIKNYLMFHENRTVDPERPDCIARQYQDRVAFTVTDTCASYCRHCFRREVVVDQRL 129
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ D + + +I++ +I +V+ TGGDP +LS + L ++ LR I HV+++RF +R
Sbjct: 130 KL--RFDLDQGIKWIKKNKEIKDVLVTGGDPFLLSDQLLGDLITQLRQIDHVRMIRFGTR 187
Query: 184 VPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
I PQRI +L++ L + + P++I NHP E +++ A+ L G+ + +Q+V
Sbjct: 188 TIINLPQRITQDLMEILGDFHRVPIWINTQCNHPKEITDKTARAVFDLLRCGVNVGNQAV 247
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKI 301
LLKGINDD + L + V RI+PYYL + + A G HFR +E+G +++ L+
Sbjct: 248 LLKGINDDVDTFRELHQKLVYTRIRPYYLFYCEAAPGIDHFRTGVEKGSQLIRDGLQGHT 307
Query: 302 SGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYPP 349
+GL +P Y+ + GK+ + + + Y + ++ P
Sbjct: 308 TGLARPTYV--IATNIGKIPLMGNDYMIEKTEKEYRLRNYLGEETILPN 354
>gi|217077357|ref|YP_002335075.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus
TCF52B]
gi|217037212|gb|ACJ75734.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus
TCF52B]
Length = 370
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 106/357 (29%), Positives = 177/357 (49%), Gaps = 25/357 (7%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++ +T + + + +E+ +++K+++ Y LIN +PNDPI IP
Sbjct: 1 MQVNYITKIEKVPQ---LSEEEKNKLKKVTEKYKFRANDYYLKLINWDDPNDPIRNLIIP 57
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
Q EL R D + +++ KG+ H+Y D LL + VC +CRFCFR+ + +
Sbjct: 58 QIGELEE--WGRLDASNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINVG 115
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
V+ +D L YI++ +I V+ TGGDPL+L+ K+L+K++ +R I HVQI+R S
Sbjct: 116 EEVV--RDVSEDLEYIKKHKEITNVLLTGGDPLLLATKKLEKIISQIREIDHVQIIRIGS 173
Query: 183 RVPIVDPQRIN--PELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
++ +P RI PELI+ +K+ K +YI NHP E ++EAI A++ L AG IL
Sbjct: 174 KMVAFNPYRITEDPELIELIKKYSTDEKKIYIMTQFNHPREITKEAIKAVNMLQKAGAIL 233
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+ L+KG+N D + L L + + + PYY+ AG F + +EE +I
Sbjct: 234 ANQTPLIKGVNADWKTLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEAYQIFLKA 293
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH-------NIVHDY 347
+SGL + + GK+++ + + Y
Sbjct: 294 IMNVSGLAKRARFA-MSHETGKIEVS-----ALTKEHVIFRYQRAHDPKNAGKIMVY 344
>gi|167469180|ref|ZP_02333884.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
FV-1]
Length = 315
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 155/310 (50%), Gaps = 4/310 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+Q +T +L + + + + + + + + P N +DP+ Q
Sbjct: 8 LQQLADVITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 68 VLTAREEFITAPGFTHDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 126
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR
Sbjct: 127 QDNQG--NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLR 184
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI L Q L + V + H NH E +++RL AG+ LL+
Sbjct: 185 IHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+N+D ++LA L + I PYY+H D G +HF + +E +++ L
Sbjct: 245 QSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEAGQLMKGLLS 304
Query: 300 KISGLCQPFY 309
++SG P
Sbjct: 305 RVSGYLVPRL 314
>gi|94500575|ref|ZP_01307106.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65]
gi|94427365|gb|EAT12344.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65]
Length = 345
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 114/325 (35%), Positives = 169/325 (52%), Gaps = 4/325 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + SAQDL + E ++ + + + I + + I P NP DP+ Q
Sbjct: 20 QLSQAQI-SAQDLLEQLSMPLELLEGAELGAAQFPIRVPQSFIDRIEPGNPQDPLFLQIW 78
Query: 62 PQKEELNILP-EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
P E P DP+ +N +P+ GIVH+Y R+LL + C ++CR+CFRR
Sbjct: 79 PFSAEGETPPLGFVTDPLEENAANPVPGIVHKYQGRVLLIVNGSCAIHCRYCFRRHFPYE 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
LS + E AL YI+ I EVI +GGDPL + KRL K++ + I HV LR
Sbjct: 139 DNNLSLS--EWEQALTYIENNPSINEVIMSGGDPLSSNDKRLFKLIDAIEAIPHVTRLRI 196
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+PI P RI P+L Q L + + + +HANH E S++ +A++RL + I LL+Q
Sbjct: 197 HSRLPITLPNRITPDLCQRLGSSRLNIVMVVHANHGNEISQDVHSAMTRLRSENIHLLNQ 256
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIND + L +L + PYYLH D G H+ + + ++ L+ +
Sbjct: 257 TVLLKGINDTTQALIDLSEQLFAAGVMPYYLHLLDPVIGAHHYHVATDVALSLMDQLQAQ 316
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
+ G P + ++PG K I T
Sbjct: 317 LPGFLVPKLVREVPGEASKTLIYTQ 341
>gi|222099542|ref|YP_002534110.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359]
gi|221571932|gb|ACM22744.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359]
Length = 365
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 104/345 (30%), Positives = 180/345 (52%), Gaps = 20/345 (5%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++ + TS + + E+ +++K + + LIN +P+DPI + IP
Sbjct: 1 MKVRYYTSVTQVEQ---LSPEEKEKLKRVEERFRFRANSYYLGLINWSDPDDPIRKIIIP 57
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ + +
Sbjct: 58 EEDELEE--WGSLDASSERSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVG 115
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HV I+R S
Sbjct: 116 AEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVHIIRIGS 173
Query: 183 RVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
++P +P RI +PEL++ +++ K +Y+ NH E +EEAI A++ L +AG +L
Sbjct: 174 KIPAFNPYRIIDDPELLRMIRKYSTKEKKIYVMTQFNHSKELTEEAIEAVNLLKDAGAVL 233
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+ LL+GIND PE L L+ + + PYY+ +G F + IE+G +I
Sbjct: 234 CNQTPLLRGINDSPETLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEKGYEIFTKA 293
Query: 298 KEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+SG+ + Y+ + GK++I + H
Sbjct: 294 ISNLSGVAKRVRYV--MSHRTGKIEI-----AALTKNFIVFKYHR 331
>gi|300113201|ref|YP_003759776.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii
C-113]
gi|299539138|gb|ADJ27455.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii
C-113]
Length = 335
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 161/317 (50%), Gaps = 2/317 (0%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ + + Q+L + + + + + + +PNDP+ RQ P
Sbjct: 19 SQAVRNPQELLVLTGLDTHPQIASETTRRQFPLRVPRSYIARMKKGDPNDPLFRQVFPLH 78
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E I P DP+GD P G++ +Y R+LL C ++CR+CFRR
Sbjct: 79 AEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCRYCFRRHFPYGDH-- 136
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + + AL YI + I EVI +GGDPL L+ RL ++ +TL I HV+ LR H+R+
Sbjct: 137 NPAQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLATISHVKRLRIHTRL 196
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P+R++ L+Q L+E + IHANH E + AA++ L++ G L +Q+VLL
Sbjct: 197 PVVLPERVDNHLLQWLEETSLQKVVVIHANHVNELDDRVAAALNDLSHVGCRLFNQTVLL 256
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+GIND L++L + + PYYLH D G +HF + + Q++ +L+ ++ G
Sbjct: 257 RGINDKVGALSDLSEGLFDAGVLPYYLHLLDKVQGAAHFEVDLMSAQRLHRTLRARLPGY 316
Query: 305 CQPFYILDLPGGYGKVK 321
P + + G K+
Sbjct: 317 LVPLLVQEQAGAPSKLP 333
>gi|285018690|ref|YP_003376401.1| lysine aminomutase [Xanthomonas albilineans GPE PC73]
gi|283473908|emb|CBA16409.1| probable lysine aminomutase protein [Xanthomonas albilineans]
Length = 315
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 98/316 (31%), Positives = 160/316 (50%), Gaps = 2/316 (0%)
Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68
+L + + + E + +++ + + +P+DP+ RQ +P EL+
Sbjct: 2 RDPHELLALLGLDPQGLGISTEAATQFALRVPRGFVARMRHGDPHDPLLRQVLPLDAELH 61
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
+P D +GD G++H+Y R LL C V+CR+CFRR +++ +
Sbjct: 62 RVPGFALDAVGDGAAKKADGVIHKYRGRALLVATGSCAVHCRYCFRRHFPYAEESA--AR 119
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
A+A I I EVI +GGDPL L+ +L ++ + L + ++ LR HSR+P+V
Sbjct: 120 DGWRDAVAAIAADPSIEEVILSGGDPLSLATPKLVELTEALTALPQIKRLRLHSRLPVVL 179
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
P+RI+ L+ L+ P+ + IHANH EF AA++RL +AG LL+Q+VLL+G+N
Sbjct: 180 PERIDAPLLAWLRALPWPLAVVIHANHANEFDAAVDAALARLRDAGAQLLNQAVLLRGVN 239
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
D E LA L + PYYLH D G +HF + + +L ++SG P
Sbjct: 240 DTVEALAKLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDATALDLHRALASRLSGYLVPK 299
Query: 309 YILDLPGGYGKVKIDT 324
+ ++PG K +
Sbjct: 300 LVREIPGDSSKRPLMP 315
>gi|262376096|ref|ZP_06069327.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145]
gi|262309190|gb|EEY90322.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145]
Length = 340
Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 159/316 (50%), Gaps = 3/316 (0%)
Query: 8 LTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T ++L + EQ+ S + + + + NP DP+ Q +P E
Sbjct: 19 ITDPRELLEVLQLAPEQLLSGAILASEQFKLRVPRAFVGKMQVGNPLDPLLLQVLPHHLE 78
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P DP+G+ + G++H+Y R LL L C V+CR+CFRR + +
Sbjct: 79 LEEHPGFVTDPLGEEQANQQPGVLHKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LP 136
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
++D Y++ + I EVI +GGDPL LS+++L+ ++ L + H++ LR HSRVPI
Sbjct: 137 KNEDWINIKQYLESQPDINEVILSGGDPLTLSNRKLKTWIERLESVPHLKFLRIHSRVPI 196
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R++ EL+ LK + + + +H+NH E + +++L I +L+Q+VLL G
Sbjct: 197 VIPNRVDEELLSMLKNSRLRIILVVHSNHASELDDFTCKRLNQLVQQQITVLNQAVLLNG 256
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND ++L +L + + PYYLH D G HF L + +I + + G
Sbjct: 257 VNDSAQVLVDLSYRLFDAGVMPYYLHVLDKVKGAHHFDLAPDHINEIYTEVLANLPGYLV 316
Query: 307 PFYILDLPGGYGKVKI 322
P + ++ G K +
Sbjct: 317 PKLVREIAGEKNKTPL 332
>gi|310765349|gb|ADP10299.1| conserved uncharacterized protein [Erwinia sp. Ejp617]
Length = 342
Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats.
Identities = 94/294 (31%), Positives = 153/294 (52%), Gaps = 3/294 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+ +++ + A + +P DP+ Q I ++E P DP+ + + S + G+
Sbjct: 46 DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ L+ ++ L I H++ LR HSR+P+V P+RI L Q L ++ +
Sbjct: 163 SGGDPLMAKDHELEWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NH E ++ + L AG+ LL+QSVLL+ IND LA L + I PY
Sbjct: 223 VTHINHAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPY 282
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
YLH D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336
>gi|170288623|ref|YP_001738861.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2]
gi|170176126|gb|ACB09178.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2]
Length = 365
Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats.
Identities = 109/348 (31%), Positives = 185/348 (53%), Gaps = 24/348 (6%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
M++++ T +T + L E+ + +K I Y +LI+ +P+DPI +
Sbjct: 1 MKVKYYTSITQVEQL------SPEERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKI 54
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ +
Sbjct: 55 VVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R
Sbjct: 113 NVGAEVI--RDITPQLDYIRTHKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIR 170
Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234
S++P +P RI +P+L+ +++ K +Y+ NHP E + EAI A++ L +AG
Sbjct: 171 IGSKIPAFNPYRIIDDPDLLMMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAG 230
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+L +Q+ LL+GINDDPE+L L+ + + PYY+ +G F + IEEG +I
Sbjct: 231 AMLCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290
Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
ISG+ + Y+ + GK++I + H
Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI-----AALTKNFIVFKYHR 331
>gi|281355041|ref|ZP_06241535.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis
ATCC BAA-548]
gi|281317921|gb|EFB01941.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis
ATCC BAA-548]
Length = 341
Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats.
Identities = 108/311 (34%), Positives = 170/311 (54%), Gaps = 8/311 (2%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERED 76
I E ++ + Y + L LI+P + NDPIARQ +P +EL L D
Sbjct: 16 LEITPE----MERVEPTYPVYLNDYYLGLIDPADWRNDPIARQSLPDPQELADLSS-SYD 70
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAAL 135
P+ + P ++HR+ DR++L C + CRFCFR+ + LS + A+
Sbjct: 71 PLAEEEQMPTPHLIHRFVDRVVLLATGRCAMRCRFCFRKRAWTSGMELADLSDEQLAGAV 130
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
Y+ + EV+ +GGDPL+L RL+ ++ + + +Q++R SR+P+V P+R+ E
Sbjct: 131 GYLTAHPAVKEVLISGGDPLMLPFGRLKAIVDAVAAVPSIQVIRIGSRMPVVWPERVTAE 190
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + ++ A H NHP E + EA AA RL AG+ +++QSVLLKG+NDD E+L
Sbjct: 191 IAEYFGSIPG-LWFATHFNHPREVTPEAAAACGRLVRAGVPVVNQSVLLKGVNDDAELLE 249
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
L R V +R+KP+YL H D G HF +E+G +I+ + + ++S L P + +DLP
Sbjct: 250 ELFRKLVAIRVKPHYLFHVDPVRGVRHFATGVEKGLQILRAFRPRLSSLAVPTFAIDLPE 309
Query: 316 GYGKVKIDTHN 326
G GKV +
Sbjct: 310 GGGKVALQPEY 320
>gi|298528659|ref|ZP_07016063.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512311|gb|EFI36213.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 357
Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats.
Identities = 112/348 (32%), Positives = 185/348 (53%), Gaps = 13/348 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + + L + I ++ I + TP A+L++P +P PI RQ +P +E
Sbjct: 12 VNTREKLADYVDITPDEDAAI--TTMRTRWGTTPYFASLMDPQDPACPIRRQVVPSLKEK 69
Query: 68 NILPEEREDPIGDNN----HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
++ I N I +Y DRI + VC YCR CFR+E+V Q
Sbjct: 70 ENKYGIQDYLIHKENRAVGEKRPDCIARQYQDRIAFTVTDVCANYCRHCFRKELVVDQGL 129
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
++ D + L +I+E ++ +V+ TGGDP ILS ++L +++ LR I HVQ++RF +R
Sbjct: 130 SL--RFDVDEGLGWIREHPEVRDVLITGGDPFILSDEKLGRIITELRRIPHVQMIRFGTR 187
Query: 184 VPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
PIV P RIN EL + L + + PV+I NH E +EE + L G+ + +Q+V
Sbjct: 188 TPIVLPSRINKELCEILGDFHRVPVWINTQCNHAREITEETARGVYDLMRCGVNVGNQAV 247
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKI 301
LLKGINDDP+ L + + +RI+PYY+ + + A G HFR +E+G +++ +++
Sbjct: 248 LLKGINDDPQSFRELHQKLLTVRIRPYYVFYCEPAPGIDHFRTPVEKGAELIRDAIRGHT 307
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH-NIKKVGNGSYCITDHHNIVHDYP 348
+GLCQP Y+ + GKV + +K+ + Y + ++ + P
Sbjct: 308 TGLCQPMYV--IATNIGKVPLMPDYYLKEKTDEEYVLRNYLDQNTSLP 353
>gi|90020728|ref|YP_526555.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40]
gi|89950328|gb|ABD80343.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40]
Length = 346
Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 155/317 (48%), Gaps = 2/317 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T +L + + ++ ++ + + + +T A+ I P + +DP+ RQ +P EL
Sbjct: 22 ITDPAELLERLELPESLLESAQKANKLFPLRVTQSYASRIKPGDVDDPLLRQVLPLGAEL 81
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
DP+ + + +P G++H+Y R+LL C + CR+CFRR + S
Sbjct: 82 TSPASYTADPLAEQSFNPAPGVIHKYHGRVLLISASQCAINCRYCFRRHF--DYQTNTPS 139
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ + AL YI + I EVI +GGDPL +S +++Q ++ + I HV LR H+R+P+V
Sbjct: 140 RAEWQEALRYIADNESIDEVILSGGDPLAVSDRQMQWLVNQIAVIPHVTRLRIHTRLPVV 199
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI EL+ L + I +H NH E E + L A I LL+QSVLLKG+
Sbjct: 200 LPNRITSELVDTLVKTRLQCVIVVHINHAAEIDEHVHNRLKILKKANITLLNQSVLLKGV 259
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND L +L + I PYYLH D G +HF + + L + G P
Sbjct: 260 NDSASCLVSLSKRLFSCGILPYYLHLLDKVTGAAHFDVDEASAIALHNHLLATLPGYLVP 319
Query: 308 FYILDLPGGYGKVKIDT 324
+ ++P K +
Sbjct: 320 KLVREVPNAASKTAVYG 336
>gi|259907161|ref|YP_002647517.1| hypothetical protein EpC_04800 [Erwinia pyrifoliae Ep1/96]
gi|224962783|emb|CAX54238.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
gi|283476968|emb|CAY72852.1| Uncharacterized kamA family protein TP_0121 [Erwinia pyrifoliae DSM
12163]
Length = 342
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 94/294 (31%), Positives = 152/294 (51%), Gaps = 3/294 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+ +++ + A + +P DP+ Q I ++E P DP+ + + S + G+
Sbjct: 46 DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ L ++ L I H++ LR HSR+P+V P+RI L Q L ++ +
Sbjct: 163 SGGDPLMAKDHELDWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NH E ++ + L AG+ LL+QSVLL+ IND LA L + I PY
Sbjct: 223 VTHINHAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPY 282
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
YLH D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336
>gi|325294734|ref|YP_004281248.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065182|gb|ADY73189.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 351
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 109/340 (32%), Positives = 176/340 (51%), Gaps = 7/340 (2%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + + + + E+ + K++++ Y TP +L I R P E+
Sbjct: 12 VRNIESIEKFFPLTDEEKESFKKVTSIYPFLSTPYYLSLAVKS---CAIKRMIFPNIMEI 68
Query: 68 NIL--PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
+ + EDP+ + + HRYPDR+L+ + CP CRFC R+ +K
Sbjct: 69 SEAIQSKGEEDPLSEERDKKTLHLTHRYPDRVLVVTTNFCPTLCRFCMRKRNW-KKKTFF 127
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+S + E AL YI++ I +V+ +GGDPL L +RL+K+L L+ I HV+++R +R P
Sbjct: 128 ISDTEIENALNYIRKNENIRDVLISGGDPLFLPIERLKKLLFGLKAIDHVEVVRVGTRAP 187
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ P R+ + + + E + V++ H NHP E +E + A+ L AGI + +Q+VLLK
Sbjct: 188 VTLPHRLLDDDLLEVLEKAEKVWVNTHFNHPDEITELSKEAVKNLLKAGIPVNNQTVLLK 247
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND +IL L R +++++PYYL H D G HF +I +G KI+ L ++IS
Sbjct: 248 GINDSADILEKLFRNLQKIKVRPYYLFHCDPVKGVMHFSTSITKGIKILEKLFKRISPFA 307
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
P+Y +D PGG GKV+I K Y +
Sbjct: 308 IPYYAVDGPGGKGKVQILPDR-YKKEGNFYIFRSFNGETF 346
>gi|15601964|ref|NP_245036.1| hypothetical protein PM0099 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720310|gb|AAK02183.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 337
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 3/314 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ + L + E +++ E + + + + NP DP+ Q + ++E
Sbjct: 23 AISDPKILLETLNLPTENVEQDLEARRLFPLRVPLPFVEKMQKGNPQDPLFLQVMSFRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ +DP+ + + + ++H+Y +R+LL + C V CR+CFRR +
Sbjct: 83 FLQVEGFSKDPL-EEQDAVVPSVLHKYHNRLLLMVKGGCAVNCRYCFRRHFPYADNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+R+P+
Sbjct: 140 NKANWQKALDYIANHPEIEEVIFSGGDPLMAKDHELDWLIKNLENIPHLQRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI + Q L E+ + H NHP E AI++L G++LL+Q+VLLKG
Sbjct: 200 VIPQRITADFCQTLAESRFQTVLVTHINHPNEIDAFFAQAINKLREVGVLLLNQAVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ IL L I PYYLH D G SHF L I L+ SG
Sbjct: 260 INDNAHILKQLGDKLFATNILPYYLHLLDKVEGASHFYLDDSRALNIYKELQSLTSGYLV 319
Query: 307 PFYILDLPGGYGKV 320
P ++ K
Sbjct: 320 PKLAREIAKEPNKT 333
>gi|307245529|ref|ZP_07527616.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307254485|ref|ZP_07536321.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258943|ref|ZP_07540674.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306853588|gb|EFM85806.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862535|gb|EFM94493.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866967|gb|EFM98824.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 333
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 90/315 (28%), Positives = 151/315 (47%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + ++ + +++ + + + NDP+ Q + E
Sbjct: 19 QAFNDPITLLEHLELNPKEFETAITARKLFALRVPRPFVEKMQKGDKNDPLFLQAMSAAE 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + +
Sbjct: 79 EFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L + ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQSKVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ +IL L E + PYYLH D G SHF + + +I L+ SG
Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAREPNKT 330
>gi|119469128|ref|ZP_01612112.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7]
gi|119447380|gb|EAW28648.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7]
Length = 337
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 93/316 (29%), Positives = 156/316 (49%), Gaps = 3/316 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T + L + + + + + + + + + + NDP+ Q +P+ +E
Sbjct: 21 VTCPKTLLEMVGLSSQVHENDLKARSLFPVRVPVPFIKKMRKGDANDPLLLQVMPRHQEF 80
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+DP+ + + GI+H+Y R+L+ C V CR+CFRR + L+
Sbjct: 81 LKKSGFNKDPLLEQ-DNDQPGILHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LN 137
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
K AL YI+ + I EVI +GGDPL+ + L L + ++ +R HSR+P+V
Sbjct: 138 KKSLLDALCYIKSDTNINEVILSGGDPLMAKDDAISWFLDELEKLPQIKRMRIHSRLPVV 197
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI EL L+++ + H NH E E AA+ +L +AG++LL+Q+V+LK +
Sbjct: 198 IPARITDELCARLQKSPLKIVFINHINHANEIDGEFKAAMQKLKHAGVMLLNQAVILKDV 257
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + NL + + PYYL+ D G SHF + E+ KI+A L + + G P
Sbjct: 258 NDTVDAQVNLSEALFDADVLPYYLYLLDKVEGASHFDINEEQAIKIMAELLKALPGFLVP 317
Query: 308 FYILDLPGGYGKVKID 323
+ ++ G K ID
Sbjct: 318 KLVREIGGQKSKTPID 333
>gi|77919981|ref|YP_357796.1| hypothetical protein Pcar_2387 [Pelobacter carbinolicus DSM 2380]
gi|77546064|gb|ABA89626.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 376
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 104/346 (30%), Positives = 180/346 (52%), Gaps = 18/346 (5%)
Query: 3 LRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+ HK +T+ + N +++ ++K + Y+ +LI+ ++P DPI R I
Sbjct: 1 MSHKKYITNIDQIPELNRLEEHHRQKLKAVQKRYAFRSNGYYQSLIDWNDPKDPIRRIVI 60
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL P D G++ +S G+ H+YPD +L + VC CRFCFR+ +
Sbjct: 61 PSADELQ--PWGELDASGESLYSKAPGLEHKYPDTAVLLVSDVCGALCRFCFRKRLFMDD 118
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
V +D A LAYI++ ++I V+ TGGDPL+LS ++L ++++ LR I+HV+I+R
Sbjct: 119 NQEVA--RDVSAGLAYIRKHTEINNVLVTGGDPLLLSTRKLTEIIEQLRAIEHVRIIRIG 176
Query: 182 SRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGII 236
S++P +P RI +PEL++ K +P +Y+ NHP E + EA A+ + +G+
Sbjct: 177 SKMPAFNPFRILDDPELLEMFKAHSQPNRRIYLMAQFNHPRELTSEARRALDLVLQSGVT 236
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
++ Q+ +++G+ND E+L L + + PYY+ G + + + IEEG I A
Sbjct: 237 VMHQTPMIRGVNDSAEVLTELFNELSYMGVAPYYVFQCRPTEGNAAYTVPIEEGYAIFAK 296
Query: 297 LKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ SGL + Y L GK+++ + + H
Sbjct: 297 AHQNCSGLARRCRYT--LSHATGKIEV-----AGLTDDQVFFRYHR 335
>gi|260913742|ref|ZP_05920218.1| KamA family protein [Pasteurella dagmatis ATCC 43325]
gi|260632281|gb|EEX50456.1| KamA family protein [Pasteurella dagmatis ATCC 43325]
Length = 337
Score = 319 bits (817), Expect = 6e-85, Method: Composition-based stats.
Identities = 104/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L ++ + L N + E ++ + + + + NP DP+ Q +
Sbjct: 19 LLANAISDPKLLLNTLNLPAEAFEKDIVARRLFPLRVPLPFVQRMEKGNPKDPLFLQVMS 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+E + DP+ + + ++H+Y +R+LL + C V CR+CFRR +
Sbjct: 79 SADEFIQVEGFTTDPLEEQEA-VVPSVLHKYHNRLLLMVKGGCAVNCRYCFRRHFPYADN 137
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ + + AL YI + +I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 138 KG--NKVNWQKALDYIAIRPEIEEVIFSGGDPLMAKDHELNWLIKNLENIPHLQRLRIHT 195
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI PEL + L E+ + H NHP E AAI +L AG++LL+QSV
Sbjct: 196 RLPVVIPQRITPELCKILSESRFQTVLVTHINHPNEIDTTLSAAIFKLKQAGVVLLNQSV 255
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLK INDD +IL L + I PYYLH D G SHF + E+ I L+ S
Sbjct: 256 LLKNINDDAQILKQLSDKLFSINILPYYLHLLDKVEGASHFYIEDEKALNIYKILQSITS 315
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ K
Sbjct: 316 GYLVPKLAREIAKEPNKT 333
>gi|315634854|ref|ZP_07890136.1| KamA family protein [Aggregatibacter segnis ATCC 33393]
gi|315476406|gb|EFU67156.1| KamA family protein [Aggregatibacter segnis ATCC 33393]
Length = 339
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 152/314 (48%), Gaps = 3/314 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
++ + L + E + E +++ + + NP DP+ Q + +E
Sbjct: 24 ISDPKILLQHLELPLESFKQDIEARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMSSADEF 83
Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + + + I+H+Y +R+L + C V CR+CFRR
Sbjct: 84 LQAEGFSKDPLEEQEDKNVVSNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYQDNKG-- 141
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI E+ +I EVIF+GGDPL+ L+ ++K L I H++ LR HSR+P+
Sbjct: 142 TKQNWQKALQYIAERPEIEEVIFSGGDPLMAKDHELEWLIKHLENIPHLKRLRIHSRLPV 201
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI + L + + H NH E + A+++L + G++LL+QSVLLK
Sbjct: 202 VIPQRITDTFCRLLAQTRLQKILVTHVNHANEIDADFAHAMAKLKDCGVVLLNQSVLLKN 261
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD IL L + I PYYLH D G +HF L KI L+ SG
Sbjct: 262 VNDDALILKTLSDRLFSVGILPYYLHLLDKVEGATHFYLDDARALKIYKELQRISSGYLV 321
Query: 307 PFYILDLPGGYGKV 320
P ++ G K
Sbjct: 322 PKLAREIGGEPNKT 335
>gi|302340146|ref|YP_003805352.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
gi|301637331|gb|ADK82758.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
Length = 374
Score = 318 bits (816), Expect = 7e-85, Method: Composition-based stats.
Identities = 127/357 (35%), Positives = 189/357 (52%), Gaps = 14/357 (3%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLINPHNPNDPIARQFI 61
L+ + +T+ +L ++ E+ E ALT +L+ +P P+ RQ I
Sbjct: 18 LKER-VTNLDELERHLCLEDEERAWFDSEEERRLPFALTRHYLSLMG-DDPASPLRRQAI 75
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+KEE + L E DP+ + +SPL ++HRY DR L C +YCR CFRR G
Sbjct: 76 PRKEEFHFLSYESADPLCEQEYSPLPRLIHRYEDRALFLASDRCALYCRHCFRRHFTGGA 135
Query: 122 K----------GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ + A Y++++ +I E++ +GGDPL+L L +++ R
Sbjct: 136 GQGDREVKNRKDRRSLFEAAQDAACYLEKRPEIRELLLSGGDPLMLPDGTLFRLIDLFRK 195
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
+ ILR +R+P V P RI P L + L P+++ NHP E S A+ A++RLA
Sbjct: 196 HRPDLILRIGTRMPAVLPSRITPVLAREL-GRRAPLFVVCQFNHPDEVSPPAVEALARLA 254
Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
++GI +L+QSVLL+G+NDD E L L + R+ PYYL DLAAGTSH R I +G
Sbjct: 255 DSGIPILNQSVLLRGVNDDRETLKVLSGALLAARVIPYYLFQGDLAAGTSHLRAPILKGV 314
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
I+ SL++ +SGL P Y +DLPGG GKV I + +V + N + YP
Sbjct: 315 SIMRSLRQCMSGLATPVYAVDLPGGGGKVSIPLDPVPRVEEREALLPGPDNRLWPYP 371
>gi|53804590|ref|YP_113783.1| hypothetical protein MCA1321 [Methylococcus capsulatus str. Bath]
gi|53758351|gb|AAU92642.1| conserved hypothetical protein TIGR00238 [Methylococcus capsulatus
str. Bath]
Length = 323
Score = 318 bits (816), Expect = 8e-85, Method: Composition-based stats.
Identities = 105/312 (33%), Positives = 162/312 (51%), Gaps = 5/312 (1%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
QDL + I E + + + A + P +P DP+ RQ +P +EL
Sbjct: 16 VQDLLDFLGIAA---PFSAEAAGKFPFRVPRAYARKMRPGDPYDPLLRQVLPLAQELASP 72
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
DP+GD + G++H+Y R LL C V+CR+CFRRE + + +
Sbjct: 73 EGFVGDPVGDRPALKVPGLLHKYQGRALLITTGACAVHCRYCFRREFPY--GESQFTRQR 130
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+AAL YI ++ E+I +GGDPL+LS RL ++ K L I H++ LR HSRVP+V P
Sbjct: 131 EKAALDYIVRDPELTEIILSGGDPLLLSDDRLVRLTKQLTAIPHLRRLRVHSRVPLVLPS 190
Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
RI+ L++ L + IHANHP E E ++ ++ + AG+ LL+QSVLL+ +ND
Sbjct: 191 RIDERLLEILAGHRLKTVVVIHANHPRELDAETVSVLAAMRRAGLTLLNQSVLLRQVNDS 250
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
L L E + PYYLH D GT+HF + E + + +L+ ++ G P +
Sbjct: 251 VSALCELSERLFECGVLPYYLHLLDRVRGTAHFEVPEAEARALHEALRRRLPGFLVPRLV 310
Query: 311 LDLPGGYGKVKI 322
++ G K+ +
Sbjct: 311 REVEGKPYKLPV 322
>gi|157374957|ref|YP_001473557.1| lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3]
gi|157317331|gb|ABV36429.1| Lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3]
Length = 397
Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats.
Identities = 103/344 (29%), Positives = 187/344 (54%), Gaps = 12/344 (3%)
Query: 6 KTLTSAQDLYN-ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ + ++L I + +++ + +TP IA L++ + PI Q++P++
Sbjct: 50 HSFKTDKELSKVFGNINPVE----EDVYKVIATRITPYIAQLMDKDDQACPIRIQYVPEQ 105
Query: 65 EELNILPEEREDPIGDNNHSPL-KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
E+++ P+E D + +++ P IVHRYP+R+L + ++C YCR C R+ MV S
Sbjct: 106 NEMDVAPQEMGDQLAEDDMMPDGTSIVHRYPNRVLFLVHNICGAYCRHCTRKRMV-SDPL 164
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHS 182
V+S + ++ Y++E ++ +V+ +GGDPL+L+ +L +VL +R ++ILR S
Sbjct: 165 NVISMERIRKSVEYLREHPEVQDVLLSGGDPLLLTDDKLDQVLSMIREARPDLKILRIGS 224
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P P RI PEL Q L + + + NHP E + + ++ L +GI+L +QSV
Sbjct: 225 RLPTQLPTRITPELCQILVKNRVTL-LNTQVNHPKEITPLFVKHMAMLRTSGIMLGNQSV 283
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
L+KG+ND E++ +L+ V I+PYY++ D A G S F+++ + +I ++ +S
Sbjct: 284 LIKGVNDSVEVMRDLVMDLVSNGIRPYYVYSMDPAPGNSKFQVSYDRMLEIYHGIRGWVS 343
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKV---GNGSYCITDHHNI 343
G P +I+D GG GK+ + ++K G T+
Sbjct: 344 GPAIPTFIVDGIGGLGKMPVQPEYVRKQVIDGETKLLATNFEGR 387
>gi|281412181|ref|YP_003346260.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila
RKU-10]
gi|281373284|gb|ADA66846.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila
RKU-10]
Length = 365
Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats.
Identities = 108/348 (31%), Positives = 184/348 (52%), Gaps = 24/348 (6%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
M++++ T +T + L E+ +K + Y +LI+ +P+DPI +
Sbjct: 1 MKVKYYTSITQVEQL------SPEERGRLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKI 54
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ +
Sbjct: 55 IVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R
Sbjct: 113 NVGAEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIR 170
Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234
S++P +P RI +P+L+ +++ K +Y+ NHP E + EAI A++ L +AG
Sbjct: 171 IGSKIPAFNPYRIIDDPDLLMMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAG 230
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+L +Q+ LL+GINDDPE+L L+ + + PYY+ +G F + IEEG +I
Sbjct: 231 AMLCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290
Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
ISG+ + Y+ + GK++I + H
Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI-----AALTKNFIVFKYHR 331
>gi|113461431|ref|YP_719500.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT]
gi|112823474|gb|ABI25563.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT]
Length = 337
Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 154/315 (48%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K ++ +L N + E + + + + NPNDP+ Q + +
Sbjct: 22 KAISDPIELLNYLELPIESFQYDIAARQLFPLRVPFPFVKKMEKGNPNDPLFLQVMASQH 81
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + H+ + I+H+Y +R+LL + + C V CR+CFRR ++
Sbjct: 82 EFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCRYCFRRHFPYAENKG- 139
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + +L YI ++I EVIF+GGDPL+ L ++K L I H+ LR H+R+P
Sbjct: 140 -NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKELENIPHLHTLRIHTRLP 198
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V PQRI EL + L E+ I H NHP E E A+ +L +A + LL+QSV+LK
Sbjct: 199 VVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKKLKHANVTLLNQSVVLK 258
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
IND+ IL L + I PYYLH D G SHF L E I L+ SG
Sbjct: 259 NINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDESAAAIYKELQRISSGYL 318
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 319 VPKLAREIAHELNKT 333
>gi|238898952|ref|YP_002924634.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466712|gb|ACQ68486.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 345
Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 159/317 (50%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T L + + K ++ + + + + A + P +P DP+ Q + +E
Sbjct: 23 ITDPLALLSFLKLDKNIKLRQGAYARALFPLRVPIAFAEKMTPGDPKDPLLLQVLTLSDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
DP+ + L G++H+Y +R+L+ + C V+CR+CFRR
Sbjct: 83 FVHTSGFSADPLCEQAA-VLPGLLHKYRNRVLMLIKGGCAVHCRYCFRRHFPYQNNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + E YI++ +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+PI
Sbjct: 140 SQVNREQVFNYIRKHTELDEVIFSGGDPLMAKDPELASLITVLESIPHIKRLRIHTRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L + + + + H NHP E + ++ RL AG+ LL+Q+VLLK
Sbjct: 200 VIPSRITTRLCESFSNSSLQILMVTHINHPNEMDQAVYNSMYRLKQAGVTLLNQTVLLKD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N++ EILA L I PYYLH D G +HF + E ++I+ +L ++SG
Sbjct: 260 VNNNAEILAQLSNRLFNAGILPYYLHLLDKVQGAAHFMVEEHEARQIMKALLGQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K+ ID
Sbjct: 320 PRLTREVAGQPSKIPID 336
>gi|170718464|ref|YP_001783679.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus
2336]
gi|168826593|gb|ACA31964.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus
2336]
Length = 337
Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 154/315 (48%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K ++ +L N + E + + + + NPNDP+ Q + +
Sbjct: 22 KAISDPIELLNCLELPIESFQYDIAARQLFPLRVPFPFVKKMEKGNPNDPLFLQVMASQH 81
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + H+ + I+H+Y +R+LL + + C V CR+CFRR ++
Sbjct: 82 EFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCRYCFRRHFPYAENKG- 139
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + +L YI ++I EVIF+GGDPL+ L ++K L I H+ LR H+R+P
Sbjct: 140 -NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKELENIPHLHTLRIHTRLP 198
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V PQRI EL + L E+ I H NHP E E A+ +L +A + LL+QSV+LK
Sbjct: 199 VVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKKLKHANVTLLNQSVVLK 258
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
IND+ IL L + I PYYLH D G SHF L E I L+ SG
Sbjct: 259 NINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDESAAAIYKELQRISSGYL 318
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 319 VPKLAREIAHEPNKT 333
>gi|152979756|ref|YP_001345385.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus
succinogenes 130Z]
gi|150841479|gb|ABR75450.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus
succinogenes 130Z]
Length = 340
Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 149/314 (47%), Gaps = 3/314 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ +L + + + + + + NP DP+ Q + +E
Sbjct: 26 AVSDPVELLKMLNLSAQFSKRDFAARKLFPLRVPIPFITKMEKGNPQDPLLLQVMLSHQE 85
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + P I+H+Y +R+L + + C V CR+CFRR +Q
Sbjct: 86 FLYAEGFNKDPLEEQK-MPAPNILHKYHNRLLFMVKNACAVNCRYCFRRHFPYNQSQG-- 142
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + A+ YI E QI EVIF+GGDPL+ L ++K L I H+Q LR HSR+P+
Sbjct: 143 NKANWRQAIEYIAENPQIEEVIFSGGDPLMAKDHELDWLIKQLETIPHLQRLRIHSRLPV 202
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ PQRI L + L+ + + H NHP E + A+ RL A + LL+QSVLLK
Sbjct: 203 MIPQRITSALCRMLQNSRLKAVLVTHINHPNEIDDVLAQAMVRLKQARVELLNQSVLLKN 262
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ +L L E+ I PYYLH D G +HF ++ E KI L+ SG
Sbjct: 263 VNDNAAVLKTLSDNLFEIGILPYYLHLLDKVEGAAHFYVSDESAVKIYRDLQATTSGYLV 322
Query: 307 PFYILDLPGGYGKV 320
P ++ K
Sbjct: 323 PKLAREIANEPNKT 336
>gi|254525082|ref|ZP_05137137.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp.
SKA14]
gi|219722673|gb|EED41198.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp.
SKA14]
Length = 313
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 152/314 (48%), Gaps = 2/314 (0%)
Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68
L + + + +++ + + + DP+ RQ +P EE+
Sbjct: 2 RDPHALLARLQLDAAALGVSEAAMAQFALRVPEGFVARMRRGDAADPLLRQVLPIDEEMR 61
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
P D +GD G++ +Y R LL C + CR+CFRR +
Sbjct: 62 PAPGFSFDAVGDGAARKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DYGAENAAK 119
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ A+A I I EVI +GGDPL L+ +L ++ LR I H++ LR HSR+PIV
Sbjct: 120 GGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLVELTDALRAIPHIRRLRIHSRLPIVL 179
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
P+R++ EL+ L P+ I +HANH EF AA++RL G LL+Q+VLL+G+N
Sbjct: 180 PERVDEELLAWLGSLPWPLAIVVHANHANEFDASVDAAMARLRGTGAQLLNQAVLLRGVN 239
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
D + L +L + + PYYLH D G +HF + + ++A L ++SG P
Sbjct: 240 DSVQALQDLSERSFAVGVLPYYLHQLDRVEGVAHFEVDDARAKALIAGLTARLSGYLIPK 299
Query: 309 YILDLPGGYGKVKI 322
+ +LPG K +
Sbjct: 300 LVRELPGDPSKRPV 313
>gi|292489640|ref|YP_003532530.1| kamA family protein [Erwinia amylovora CFBP1430]
gi|292898145|ref|YP_003537514.1| hypothetical protein EAM_0421 [Erwinia amylovora ATCC 49946]
gi|291197993|emb|CBJ45095.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
gi|291555077|emb|CBA23181.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora
CFBP1430]
gi|312173816|emb|CBX82070.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora ATCC
BAA-2158]
Length = 342
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 3/294 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+ +++ + A + +P DP+ Q I ++E P DP+ + + S + G+
Sbjct: 46 DARRLFALRVPKAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+I
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIL 162
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ L ++ L I H++ LR HSR+P+V P+RI L Q L + +
Sbjct: 163 SGGDPLMAKDHELDWLIGQLEQIPHLRRLRIHSRLPVVIPKRITEALCQRLAQTRLQTLM 222
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NH E E+ + L AG+ LL+QSVLL+ IND +LA L + I PY
Sbjct: 223 VTHINHAQEIDEDLRHGMRMLKRAGVTLLNQSVLLRDINDSAPVLAALSNALFDAGILPY 282
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
YLH D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARIIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336
>gi|166711823|ref|ZP_02243030.1| hypothetical protein Xoryp_10295 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 342
Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + L + + + + + + + + +DP+ RQ +
Sbjct: 24 QQWRDAVRDPRVLLELLGLNAQAAAISDTAAAQFPLRVPRAFVARMRHGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ +P D +GD G++ +Y R LL C V+CR+CFRR ++
Sbjct: 84 PLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR H
Sbjct: 144 ESA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+PIV P+R++ L+ L+ PV +HANH EF A+ L + G LL+Q+
Sbjct: 202 SRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDTAMHALRDTGAQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+ND + LA L + PYYLH D AG +HF + + + L ++
Sbjct: 262 VLLGGVNDSVDALAALSERSFAAGVVPYYLHQLDRVAGVAHFEVDDARARALHTELATRL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++PG GK +
Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342
>gi|319789677|ref|YP_004151310.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
gi|317114179|gb|ADU96669.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
Length = 372
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 106/348 (30%), Positives = 176/348 (50%), Gaps = 20/348 (5%)
Query: 8 LTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
S +++ A I + ++++E+ + + + A LI+ +PNDPI P +
Sbjct: 6 FKSLEEVEQAFGVKIPDSEREKLQEVIEKHPMFIPDYYARLIDWSDPNDPIKNIIFPSLD 65
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL++ D G+ ++ L G+ H+Y + LL + + C YCR CFR+ +VG
Sbjct: 66 ELDVS--GSYDTSGEKENTVLTGLQHKYKETALLLVTNRCAGYCRHCFRKRLVGIPTNET 123
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L K + A+ YI+E +I V+ +GGDPL+L ++ L L I H++ +RF SRVP
Sbjct: 124 L--KLFDRAVEYIKEHPEITNVLISGGDPLVLPTDVIEYFLSELSKIPHLKFIRFGSRVP 181
Query: 186 IVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+ P RI + +L++ + P VY+ H NHP E ++EA A+ L AG+ + +Q
Sbjct: 182 VFYPMRIYEDTKLLEVFSKYSTPERRVYLVTHFNHPNEVTKEARKAVDSLIRAGVPVSNQ 241
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIVASLKE 299
+VLLKG+ND PE+LA LM+ + PYY+ + HF++ ++EG IV K
Sbjct: 242 TVLLKGVNDTPEVLATLMKEITSAGVIPYYVFQCRPVSRVKTHFQVPLKEGYWIVEGAKR 301
Query: 300 KISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ G + YI + GK++I V + H +
Sbjct: 302 MLDGHAKRFKYI--MSHKTGKIEI-----VGVMGDEIFLKYHQAKNPE 342
>gi|257063931|ref|YP_003143603.1| KamA family protein [Slackia heliotrinireducens DSM 20476]
gi|256791584|gb|ACV22254.1| KamA family protein [Slackia heliotrinireducens DSM 20476]
Length = 407
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 102/321 (31%), Positives = 171/321 (53%), Gaps = 10/321 (3%)
Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68
+ Q L + + ++ I +Y + + P +L+NP++P+DP+ R IP EEL+
Sbjct: 21 SDIQQLRDFLQLSDADSTMLESIQENYPLLVNPYYLSLVNPNDPDDPVRRMCIPAAEELD 80
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
D G++ + L G+ H+Y + L+ + C +YCR CFRR +VG +
Sbjct: 81 FS--GLADTSGESKSTVLPGLQHKYAETALVLSTNQCAMYCRHCFRRRLVGRDADETV-- 136
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
++ +A YI++ +I V+ +GGD L+ S++ L + L+ L I H++ +R +R+P+V
Sbjct: 137 RNIDAVADYIRDHEEITNVLISGGDALMNSNETLFRYLEALAPIPHLKTIRLGTRIPVVL 196
Query: 189 PQRINPE--LIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
PQRI + LI L +++ NHP E + E+ AI L GI + +Q+VLL
Sbjct: 197 PQRITDDPGLIDLLSGFNHIVQLHVVTQFNHPNEITPESRDAIRILLELGIPVRNQTVLL 256
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKIVASLKEKISG 303
KG+ND PE LA LM V + I PYY+ G + F++ I G IVA + ++SG
Sbjct: 257 KGVNDTPETLARLMDDLVGIGIVPYYVFQCRPTVGVKNRFQVPILTGCNIVAQARAQLSG 316
Query: 304 LCQPFYILDLPGGYGKVKIDT 324
L + F + + GK+++
Sbjct: 317 LAKSFRYI-MSHDAGKIELLG 336
>gi|293391874|ref|ZP_06636208.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290952408|gb|EFE02527.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 343
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 3/314 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
++ + L + E + E +++ + + N DP+ Q + +E
Sbjct: 28 ISDPKILLQHLELPLEPFKQDIEARKLFAMRVPLPFVAKMEKGNARDPLFLQVMSFADEF 87
Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + + + I+H+Y +R+L + C V CR+CFRR Q
Sbjct: 88 LQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYDQNKG-- 145
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI +I EVI +GGDPL+ + ++K L + H+ LR HSR+P+
Sbjct: 146 NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKHLENLPHLTRLRIHSRLPV 205
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI + L + + H NH E E+ A+ +L N G++LL+QSVLLK
Sbjct: 206 VIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 265
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD IL L + I PYYLH D G +HF L + +I L+ SG
Sbjct: 266 VNDDAHILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALRIYKQLQRITSGYLV 325
Query: 307 PFYILDLPGGYGKV 320
P ++ G K
Sbjct: 326 PKLAREIGGEPNKT 339
>gi|332534315|ref|ZP_08410158.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036225|gb|EGI72698.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 329
Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 154/316 (48%), Gaps = 3/316 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T + L + + + + + + + + I +PNDP+ Q +P+ +E
Sbjct: 13 VTCPKTLLEMVGLSSQVHENDLKARSLFPVRVPIPFIKKIRKGDPNDPLLLQVMPRHQEF 72
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+DP+ + + G++H+Y R+L+ C V CR+CFRR + L+
Sbjct: 73 LTKSGFNKDPLLEQ-DNDQPGLLHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LN 129
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
K L+YI+ S I EVI +GGDPL+ + L L + ++ +R HSR+P+V
Sbjct: 130 KKSLLETLSYIKSDSNINEVILSGGDPLMAKDDAISWFLDELEQLPQIKRMRIHSRLPVV 189
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P R+ EL + L ++ + H NH E + AA+ +L A + LL+Q+V+LK +
Sbjct: 190 IPTRVTDELCERLAKSPLKIIFINHINHANEIDADFKAAMQKLKQANVTLLNQAVILKDV 249
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + NL + + PYYL+ D G SHF + E+ KI+A L + + G P
Sbjct: 250 NDTLDAQINLSEALFDADVLPYYLYLLDKVEGASHFDINEEDAIKIMAELLKALPGFLVP 309
Query: 308 FYILDLPGGYGKVKID 323
+ ++ G K ID
Sbjct: 310 KLVREIGGQKSKTPID 325
>gi|317129675|ref|YP_004095957.1| lysine 2,3-aminomutase YodO family protein [Bacillus
cellulosilyticus DSM 2522]
gi|315474623|gb|ADU31226.1| lysine 2,3-aminomutase YodO family protein [Bacillus
cellulosilyticus DSM 2522]
Length = 388
Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats.
Identities = 116/349 (33%), Positives = 183/349 (52%), Gaps = 18/349 (5%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ K + + + I +E+ ++K+I+ + + NLI+ +NPNDPI + IP
Sbjct: 3 QPKYIMNIDKITQ---IPEEERAKLKKITEKFVFRVNDYYLNLIDWNNPNDPIKKLIIPN 59
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ EL R D ++ + G H+Y LL + VC YCR+CFR+ + +
Sbjct: 60 EGELEE--YGRWDASDEDTNYAAPGCQHKYGTTALLIVSEVCGAYCRYCFRKRLFRNDIK 117
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ D + + YI+ QI V+ TGGD LIL+ K+L+ +++ LR I HV+I+R S+
Sbjct: 118 EAM--ADVQPGIEYIKNNPQINNVLLTGGDSLILATKKLRLIIEQLREIPHVKIIRLGSK 175
Query: 184 VPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+P+ +P RI + EL+ +KE P +Y+ H NHP E +EEA L NAG I++
Sbjct: 176 MPVFNPMRIYEDQELLDLIKEYSTPEQRIYVMAHINHPVEITEEAKKGFDALHNAGAIVV 235
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+ +LKGINDDPE+LA L+ + PYY AG + F LT+EE V + K
Sbjct: 236 NQTPVLKGINDDPEVLAELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEAYNAVEAAK 295
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
K SGL + L + GK+++ + NG + H + DY
Sbjct: 296 AKTSGLGKRVR-LSMSHTSGKIEV-----LAIDNGKAYLKYHQSRDGDY 338
>gi|94676743|ref|YP_589018.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|94219893|gb|ABF14052.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 339
Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 159/314 (50%), Gaps = 3/314 (0%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + +++ E + + + + +P DP+ RQ + EE
Sbjct: 23 ITNPMELLQQLKLDQDKKLREAIKARQLFPFRVPKTFVKRMKYEDPTDPLLRQVLTLPEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ +DPI + ++ ++H+Y +R +L + C + CR+CFRR +
Sbjct: 83 FKQHLDFSKDPINEQQYNVAPMLLHKYYNRAILLVKSGCAINCRYCFRRYFPYQDNQS-- 140
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + A+ YI++ S++ E+I +GGDPL+ L K+L L I H+ LR HSR+ I
Sbjct: 141 NQANWKLAIEYIKQHSELNEIILSGGDPLMAKDHELDKLLNLLEDIPHLTKLRIHSRLLI 200
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI + Q L + V + H NH E +I++L N + LL+QSVLL+G
Sbjct: 201 VIPARITSFICQRLARSRLKVVLVTHINHAQEIDSSVQKSIAKLRNKQVTLLNQSVLLRG 260
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ +ILA L T + I PYYLH D G +HF + + +KI+ L K++G
Sbjct: 261 INDNAQILATLSETLFSIGILPYYLHTLDCVQGATHFIVDDQRARKIMHDLLSKVAGYLV 320
Query: 307 PFYILDLPGGYGKV 320
P + D+ G K
Sbjct: 321 PRLVRDISGMPSKT 334
>gi|261868588|ref|YP_003256510.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413920|gb|ACX83291.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 343
Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 3/314 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
++ + L + E + E +++ + + N DP+ Q + +E
Sbjct: 28 ISDPKILLQHLELPLEPFKQDIEARKLFAMRVPLPFVAKMEKGNARDPLFLQVMSFADEF 87
Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + + + I+H+Y +R+L + C V CR+CFRR Q
Sbjct: 88 LQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYDQNKG-- 145
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI +I EVI +GGDPL+ + ++K L + H+ LR HSR+P+
Sbjct: 146 NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKHLENLPHLTRLRIHSRLPV 205
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI + L + + H NH E E+ A+ +L N G++LL+QSVLLK
Sbjct: 206 VIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 265
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD IL L + I PYYLH D G +HF L + +I L+ SG
Sbjct: 266 VNDDAHILKVLSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALRIYKQLQRITSGYLV 325
Query: 307 PFYILDLPGGYGKV 320
P ++ G K
Sbjct: 326 PKLAREIGGEPNKT 339
>gi|294664930|ref|ZP_06730245.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605300|gb|EFF48636.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 342
Score = 316 bits (809), Expect = 4e-84, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 153/321 (47%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + L + + + + + + + + +DP+ RQ +
Sbjct: 24 QQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ P D +GD G++ +Y R LL C V+CR+CFRR ++
Sbjct: 84 PLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EV+ +GGDPL L+ +L ++ L + H++ LR H
Sbjct: 144 E--TATRDGWRDAVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+PIV P+R++ L+ L+ PV +HANH EF AA L AG LL+Q+
Sbjct: 202 SRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLREAGAQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA L + PYYLH D AG +HF + + + A L ++
Sbjct: 262 VLLRGVNDSVDALAALSERSFVAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAARL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++PG GK +
Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342
>gi|308048933|ref|YP_003912499.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica
DSM 9799]
gi|307631123|gb|ADN75425.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica
DSM 9799]
Length = 400
Score = 316 bits (809), Expect = 5e-84, Method: Composition-based stats.
Identities = 101/344 (29%), Positives = 183/344 (53%), Gaps = 10/344 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K+ S +DL ++ + +TP +A L++ ++PN PI Q++P+++
Sbjct: 55 KSFQSDKDLAKVLH---GVRPVEDDVYKVIAARITPYVAQLMDKNDPNCPIRIQYVPEQD 111
Query: 66 ELNILPEEREDPIGDNNHSPL-KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E++I P E D + +++ P +VHRYP+R+L + ++C YCR C R+ MV S
Sbjct: 112 EMHIAPHEMGDQLAEDDMMPEGTSLVHRYPNRVLFLVHNICGAYCRHCTRKRMV-SDPLN 170
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSR 183
V+ ++ Y+++ ++ +V+ +GGDPL+L+ +L ++L +R ++ILR SR
Sbjct: 171 VIDMARIRRSVEYLRDHPEVQDVLLSGGDPLLLTDSKLDEILSMIREARPDLKILRIGSR 230
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+ P R+ PEL+ L + + I NHP E + I + L AG++L +QSV+
Sbjct: 231 LLAQLPTRVTPELVDVLVKNRVTL-INTQVNHPREITPLFIKHTTMLRRAGVMLGNQSVM 289
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
+KG+NDD E++ +L+ V I+PYY++ D A G S F ++ + +I ++ +SG
Sbjct: 290 IKGVNDDVEVMRDLVMDLVSNGIRPYYVYSMDPAPGNSKFMVSYDRMLEIYHGIRGWVSG 349
Query: 304 LCQPFYILDLPGGYGKVKIDTHNI---KKVGNGSYCITDHHNIV 344
P +I+D GG GK+ + + + G T+
Sbjct: 350 PAIPTFIVDGIGGLGKMPVQPEYVKKTVQDGETKLIATNFEGRT 393
>gi|160901658|ref|YP_001567239.1| lysine 2,3-aminomutase [Petrotoga mobilis SJ95]
gi|160359302|gb|ABX30916.1| Lysine 2,3-aminomutase [Petrotoga mobilis SJ95]
Length = 370
Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 100/337 (29%), Positives = 175/337 (51%), Gaps = 15/337 (4%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
L I +E++ E++ + Y +LIN + NDPI + IP EEL
Sbjct: 6 VTKLEKVKGISQEELKELQPVEEKYKFRANEYYLDLINWKDKNDPIRKIIIPSVEELEE- 64
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
ED +++++ KG+ H+Y D LL + VC +CRFCFR+ + + V+ +++
Sbjct: 65 -WGLEDASREHSYTISKGLQHKYRDTALLLVNDVCGSFCRFCFRKRLFKNVGKEVVRTRE 123
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ L YI++ +I V+ TGGDPL+LS +L+ +++++ I H++I+R ++ P +P
Sbjct: 124 IDKDLDYIRKHEEITNVLLTGGDPLLLSTNKLKSIIESINEIDHIKIIRIGTKTPAFNPF 183
Query: 191 RINPE-----LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
RI + LI+ + +GK +Y +H NHP E + +I I+ L N+G I+ +Q+ LL
Sbjct: 184 RIISDDALSNLIKKITNSGKKLYFIVHFNHPRELTSASIQGINILQNSGAIIANQTPLLH 243
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND+P+ L+ L + I PYY+ G F + +E+ I E ISGL
Sbjct: 244 GINDNPKTLSTLFKKLSFNGIPPYYVFQNRPVMGNKGFTIPLEKAYSIFLESLEDISGLA 303
Query: 306 -QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+P ++ + GK+++ + + + H
Sbjct: 304 KRPRFV--MSHESGKIEV-----AALTSKNIIFRYHR 333
>gi|325926499|ref|ZP_08187819.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118]
gi|325543148|gb|EGD14591.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118]
Length = 342
Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + L + + + + + + + + +DP+ RQ +
Sbjct: 24 QQWRDAVRDPRVLLQLLGLDAQAASISAAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ +P D +GD G++ +Y R LL C V+CR+CFRR ++
Sbjct: 84 PLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ I I EV+ +GGDPL L+ +L ++ L I H++ LR H
Sbjct: 144 E--TAARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAIPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+PIV P+R++ L L+ PV +HANH EF AA+ L + G LL+Q+
Sbjct: 202 SRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRDTGAHLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA L + PYYLH D AG +HF + + + A L ++
Sbjct: 262 VLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAARL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++PG GK +
Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342
>gi|78048134|ref|YP_364309.1| putative radical SAM superfamily protein [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78036564|emb|CAJ24255.1| putative radical SAM superfamily protein [Xanthomonas campestris
pv. vesicatoria str. 85-10]
Length = 342
Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + L + + + + + + + + +DP+ RQ +
Sbjct: 24 QQWRDAVRDPRVLLQLLGLDAQAAAISAAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ +P D +GD G++ +Y R LL C V+CR+CFRR ++
Sbjct: 84 PLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ I I EV+ +GGDPL L+ +L ++ L I H++ LR H
Sbjct: 144 E--TAARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAIPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+PIV P+R++ L L+ PV +HANH EF AA+ L + G LL+Q+
Sbjct: 202 SRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRDTGAHLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA L + PYYLH D AG +HF + + + A L ++
Sbjct: 262 VLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAARL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++PG GK +
Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342
>gi|257455683|ref|ZP_05620912.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60]
gi|257446966|gb|EEV21980.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60]
Length = 333
Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 165/319 (51%), Gaps = 5/319 (1%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
T+TS +L A + ID + + + + + NDP+ +Q +P
Sbjct: 16 SDTITSFAELGQALDLP---IDSFDSQVGQFPLKVPRRFVQKMGKGDINDPLLKQVLPTF 72
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+E + DP+ + + +P+KGI+H+Y R+L+ + C V CR+CFR+
Sbjct: 73 QETVQVTGFVTDPLDEQHANPVKGIIHKYASRVLIPVTGACVVNCRYCFRQHF--DYHEN 130
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + D +A AYI + EVI +GGDPL LS++RL ++ TL + V +R H+RV
Sbjct: 131 LPTHNDWQAISAYITAHPAVNEVILSGGDPLSLSNRRLLEIFTTLEALPQVHTIRIHTRV 190
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P++ P+R++ L+ + + + IHANHP E +E + + AG+ LL+Q+VLL
Sbjct: 191 PVMIPERLDEPLLARFANSRCHIVMVIHANHPNEIDQETQIFLGKAKKAGVTLLNQTVLL 250
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
K INDD LA+L + + PYYLH D AG SHF ++ E+ + L K +G
Sbjct: 251 KSINDDANTLASLNEKLWQAGVLPYYLHVLDKVAGASHFYISDEQAVALYWELLAKCAGY 310
Query: 305 CQPFYILDLPGGYGKVKID 323
P + +LP K +D
Sbjct: 311 LVPKLVRELPNKPFKTPVD 329
>gi|225403174|ref|ZP_03760471.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme
DSM 15981]
gi|225043179|gb|EEG53425.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme
DSM 15981]
Length = 364
Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats.
Identities = 101/342 (29%), Positives = 180/342 (52%), Gaps = 16/342 (4%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T A++L + E+ ++ I H+ + +T +LIN +P DPI R IP EE
Sbjct: 11 ITKAEELRGYLKLSDEETSRLEAILEHFPMTITRYYLSLINWDDPKDPIRRMCIPSIEEN 70
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
++ + D G+ +++ L G+ H+Y + +L+ H C +YCR CFR+ +VG +
Sbjct: 71 DMTGKF--DTSGEADNTILPGLQHKYNETVLILSTHRCAMYCRHCFRKRLVGISDDE--T 126
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ + YI++ ++I + +GGD + S+ +++ L+ I+H+ ++RF +R P+V
Sbjct: 127 ADNVAEMADYIRQHAEISNALISGGDAFLNSNAVIRRYLELFSDIEHLDLIRFGTRTPVV 186
Query: 188 DPQRI--NPELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
P RI +PEL++ L+ K +Y+ NHP E + EA A+ L NAG++L +Q+VL
Sbjct: 187 LPARIYDDPELLETLQTYSQRKKIYVVTQFNHPAELTGEAKKAVDALLNAGVVLKNQTVL 246
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKIS 302
LKG+NDD + L++ I PYY+ +G HF++ + EG +IV K+ +
Sbjct: 247 LKGVNDDGRTMGELLKGLTRWGIAPYYIFQCRPVSGVGGHFQVPLTEGYRIVEEAKQFQN 306
Query: 303 GLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
G + Y+ + GK++I + +G H
Sbjct: 307 GPGKCVRYV--MSHVTGKIEILGQ----LPDGQMLFKYHQAK 342
>gi|149179351|ref|ZP_01857910.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797]
gi|148841823|gb|EDL56227.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797]
Length = 335
Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats.
Identities = 105/322 (32%), Positives = 172/322 (53%), Gaps = 5/322 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + Q+L + + ++ ++ + ++ + + + N I P + +DP+ +Q +P +
Sbjct: 16 QAIRDPQELISRLNLPQDLLEPARRSAHLFPLMVPVSYLNRIEPGSLDDPLLKQILPVEL 75
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E +P D +GD N GI+ +Y R LL + C ++CR+CFRR +
Sbjct: 76 ENADIPGFETDAVGDLNVRATPGILQKYHGRALLMVSGACAIHCRYCFRRHYPYGDEPRT 135
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L D E +Q S + E+I +GGDPL+L+ RL + + + I HV+ LR HSR+P
Sbjct: 136 L--ADWEPVWQSLQADSTVQEIILSGGDPLLLTDLRLNDLCERIAAIPHVKRLRIHSRLP 193
Query: 186 IVDPQRINPELIQCL---KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
+V P RI+ L++ L E G ++ IH NHP E + + AI ++ AGI +L+QSV
Sbjct: 194 VVLPDRIHAGLLEMLHGLTEQGTMPWMVIHINHPNEIAPDVELAIKQMLQAGIPVLNQSV 253
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKGIND E L L V L + PYYLH D G +HF + +G+K++ L+ ++
Sbjct: 254 LLKGINDTAETLIELSEKLVNLGVIPYYLHQLDRVTGAAHFEVPQAQGRKLIEELRTRLP 313
Query: 303 GLCQPFYILDLPGGYGKVKIDT 324
G P Y+ ++PG K +
Sbjct: 314 GYAVPQYVREIPGEPHKTSLLG 335
>gi|254447007|ref|ZP_05060474.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
HTCC5015]
gi|198263146|gb|EDY87424.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
HTCC5015]
Length = 343
Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats.
Identities = 108/321 (33%), Positives = 160/321 (49%), Gaps = 4/321 (1%)
Query: 4 RHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+ + +TS +L + ++ + +S+ + + + +DP+ Q +
Sbjct: 25 QAEAVTSPAELLRLVGLDQHPRWKEQAERAQPPFSLKVPRSYIHRMQFGCADDPLLLQAL 84
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
PQ E + DP+GD N G++H+Y R+LL C ++CR+CFRRE Q
Sbjct: 85 PQAVEHAEVAGFSADPVGDLNAQKTTGLLHKYHGRVLLVATGACAIHCRYCFRREYPYEQ 144
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L YI S I EVI +GGDPL LS KRL K++ + I HVQ LR H
Sbjct: 145 ASATQS--QWQESLDYIAADSSIHEVILSGGDPLTLSDKRLHKLIDRIETISHVQRLRIH 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+PIV P R+ L Q L ++ + +HANH E A+ L AG+ L+Q+
Sbjct: 203 SRLPIVLPSRVTETLCQRLAQSRLRCIMVVHANHAQELDHTTAKALQDLRRAGVDCLNQA 262
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GIND E LA L E PYYLH D G +HF + + +VA L+E++
Sbjct: 263 VLLAGINDSVEALAQLSERLFEQGALPYYLHSLDRVHGAAHFEVDEARAKHLVAQLRERL 322
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++ G K +
Sbjct: 323 SGYLVPTLVREIEGESSKTPL 343
>gi|307352679|ref|YP_003893730.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
gi|307155912|gb|ADN35292.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
Length = 368
Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats.
Identities = 97/349 (27%), Positives = 169/349 (48%), Gaps = 17/349 (4%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
K +T + + +E+ ++ E+ ++ +LI+ ++P DPI + IP
Sbjct: 2 YSPKYITDITKVP---GLSEEEKKKLAEVQEMFAFRSNEYYLSLIDWNDPADPIRKLVIP 58
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL R D G+ + G+ H+Y L+ + +C +CR+CFR+ + +
Sbjct: 59 DPAELEE--WGRLDASGEARYIVAPGMEHKYDQTALVLVSDMCAGFCRYCFRKRIFMNGG 116
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++ D + L YI +I V+ +GGDPL LS RL+K++ +R I HVQI+R +
Sbjct: 117 AREVAR-DIDVDLEYISSHPEITNVLLSGGDPLFLSTNRLEKIIAWIREIDHVQIVRIGT 175
Query: 183 RVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+VP +P RI + +L + ++ K +YI NHP E +E+AI A++ L +G +
Sbjct: 176 KVPAYNPYRILNDTKLPEIIRRYSTEEKKIYIVTQFNHPRELTEQAIKAVNILQESGAVF 235
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+ LL GIND+PE +A L R + I PYY+ G F + +E+G I+
Sbjct: 236 ANQTPLLHGINDNPETMAELSRKLSFIGITPYYVFQCRPTLGNRDFVVPVEDGYFILEQA 295
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
K SGL + + + GK+ + + + H + +
Sbjct: 296 KMNCSGLAK-RFTFAMSHVCGKIAV-----VGIDEERTYLKYHQSAEWE 338
>gi|239618040|ref|YP_002941362.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
gi|239506871|gb|ACR80358.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
Length = 366
Score = 315 bits (807), Expect = 8e-84, Method: Composition-based stats.
Identities = 105/342 (30%), Positives = 172/342 (50%), Gaps = 18/342 (5%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
K LT + + K + +++K+++ + NLI +PNDPI R IP
Sbjct: 4 PKYLTRIDQISQ---LDKTEKEKLKKVTEKFVFRTNEYYLNLIKWDDPNDPIKRIIIPSM 60
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL D ++ ++ G+ H+Y D L+ + VC CRFCFR+ + +
Sbjct: 61 DELIE--WGELDASNEHKYTVAPGLEHKYKDTALMLVSRVCGGICRFCFRKRVFLAGNRE 118
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
++ D E L YI++ +I V+ +GGDPL+LS +L+ ++ LR I HVQI+R +++
Sbjct: 119 IMI--DVEPGLEYIKKHKEITNVLLSGGDPLMLSTSKLENIISRLRKIDHVQIIRIGTKM 176
Query: 185 PIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+P RI +P+LI+ LK+ P +YI NHP E ++ AI AI+ L AG L +
Sbjct: 177 VAFNPYRIIDDPKLIELLKKYSTPKKRIYIMTQFNHPREITDVAIEAINLLKEAGTELAN 236
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+ L++GIND PE LA L R + + PYY+ G + + IEEG +I
Sbjct: 237 QTPLIRGINDSPETLAELFRKLSFIGVPPYYVFQCRPTKGNKAYSVPIEEGYEIFRKATA 296
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+SGL + + GK+++ + + + H
Sbjct: 297 MVSGLAKRARFA-MSHMTGKIEV-----VGLDDEHIYMKYHR 332
>gi|284162142|ref|YP_003400765.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus
DSM 5631]
gi|284012139|gb|ADB58092.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus
DSM 5631]
Length = 368
Score = 315 bits (807), Expect = 8e-84, Method: Composition-based stats.
Identities = 108/342 (31%), Positives = 187/342 (54%), Gaps = 13/342 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + + +L I ++ ++++++ + + +T +LI+ ++ NDPI R IP +
Sbjct: 9 RNVRTVDELKEYVNIPQDVEEKLRKVVEIHPMNVTRYYLSLIDWNDSNDPIKRMAIPSPD 68
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL+ L + D G++ ++ ++G+ H+Y + L+ + C VYCR+CFR+ MVG + V
Sbjct: 69 ELSCLEGDY-DTSGEHENTKMRGLQHKYSETALVLATNRCAVYCRYCFRKRMVGLTRDEV 127
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + + A+ YI+E ++ V+ +GGDP +L +K +++ L L I H+ +RF SRVP
Sbjct: 128 I--RRLDRAVKYIEEHEEVTNVLISGGDPFVLDNKIIKRFLNKLVEIPHLDFIRFGSRVP 185
Query: 186 IVDPQRI-NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
+ P R+ + +L + L E K +Y+ H NHP EF+EE+ AI RL + GI++ +Q+V
Sbjct: 186 VTFPMRLNDDDLPEILGEFAELKRIYVVTHYNHPKEFTEESTGAIKRLLDNGIVVSNQAV 245
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKIVASLKEKI 301
LLKG+NDDP LA L R V I PYY+ F++ ++EG KIV K +
Sbjct: 246 LLKGVNDDPYTLAELHRLLVRYGIVPYYVFQCRPVKRVKGIFQVPLKEGYKIVERAKAML 305
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
G + F + + GK++I V + H
Sbjct: 306 DGHSKRFRYI-MSHRTGKIEI-----VGVDGDYIYLKYHQAK 341
>gi|294624428|ref|ZP_06703117.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601277|gb|EFF45325.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 342
Score = 315 bits (807), Expect = 8e-84, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 152/321 (47%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + L + + + + + + + + +DP+ RQ +
Sbjct: 24 QQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ P D +GD G++ +Y R LL C V+CR+CFRR ++
Sbjct: 84 PLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+ I I EV+ +GGDPL L+ +L ++ L + H++ LR H
Sbjct: 144 E--TAARDGWRDAVVAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+PIV P+R++ L+ L+ PV +HANH EF AA L AG LL+Q+
Sbjct: 202 SRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLREAGAQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA L + PYYLH D AG +HF + + + A L ++
Sbjct: 262 VLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAARL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++PG GK +
Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342
>gi|95928491|ref|ZP_01311238.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95135281|gb|EAT16933.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 393
Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats.
Identities = 99/338 (29%), Positives = 170/338 (50%), Gaps = 15/338 (4%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS +L + ++ +++ ++ + + + +LI+P++ +DPI + +P EEL
Sbjct: 29 ITSVDELKAYLPLSYDEEADLRTVTEAHPMNIPRYYLSLIDPNDAHDPIRKLAVPAAEEL 88
Query: 68 NILPEE---REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+ +DP GD+ H GI+H+Y L+ C +YCR CFR+ MVG
Sbjct: 89 VVAGAMGETTKDPYGDDKHDKGNGILHKYSYTALVVATEYCSMYCRHCFRKRMVGLPNHQ 148
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ ++ A YI +I V+ +GGDPL+L ++K+L L I H+ +R SR
Sbjct: 149 TV--ENFHNAAKYIAAHPEITNVVISGGDPLLLPTHVIRKMLAALEDIPHLNFVRIGSRA 206
Query: 185 PIVDPQRI-NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
P+V P R + ELI L++ G K + + H NHP E + EA AI R+ AG+ + +Q+
Sbjct: 207 PVVYPIRFADDELIDVLRDFGRKKTLQMPTHFNHPVELTSEAAEAIRRVREAGVTVNNQA 266
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEK 300
V L G+NDD E L LM + + + PYYL+ A HF++ ++ G IV + +
Sbjct: 267 VFLSGVNDDVETLTELMNGLLRIGVNPYYLYQCMPVARVRHHFQVPLKRGVDIVDEARRR 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
+ G + + + GK++I + +
Sbjct: 327 MDGYAK-RFKFIIGHDIGKLEIC-----GRSGDTMVLK 358
>gi|242280374|ref|YP_002992503.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
gi|242123268|gb|ACS80964.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
Length = 353
Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats.
Identities = 111/353 (31%), Positives = 176/353 (49%), Gaps = 16/353 (4%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+++ + + + L + ++ + I ++ TP +A+L++ +PN PI Q I
Sbjct: 7 QMKN-MVDNLERLKQYINVTPDEEEAINTLNTK--WGTTPHMASLMDKDDPNCPIRMQAI 63
Query: 62 PQKEELNILPEEREDPIGDNN----HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
P +E + N I +Y DRI + +C YCR CFR+E+
Sbjct: 64 PSLKETKNEFGLDNYLVWKENRDTEEKRPDCIARQYVDRIAFTVTDICANYCRHCFRKEL 123
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V + + D E + +I+E +I +V+ TGGDPL+LS R+ +LK+LR I HV++
Sbjct: 124 VVDKNLEL--RFDLEEGIDWIREHEEIRDVLVTGGDPLLLSDDRIDHLLKSLRSIDHVEM 181
Query: 178 LRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
+RF SRVPI PQRI PEL++ L + PV++ NHP E + A+ L AG+
Sbjct: 182 IRFGSRVPIAMPQRITPELLEVLGGDHEVPVWLNTQCNHPKELTPRTRKAVYDLLTAGVN 241
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ +Q VLLKGINDD E +L + ++ RI+PYY+ + + A G HFR + I
Sbjct: 242 VGNQMVLLKGINDDVETFRHLHQKLLQYRIRPYYVFYCEPAPGIDHFRT---RAELIRDG 298
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNI-KKVGNGSYCITDHHNIVHDYP 348
L+ +GL QP Y+ GK+ + + Y +H P
Sbjct: 299 LRGHTTGLAQPMYVC--ATNIGKIPLMPDYYCVDKNDKEYTFRNHRWQTTTMP 349
>gi|303328383|ref|ZP_07358821.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3]
gi|302861713|gb|EFL84649.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3]
Length = 378
Score = 314 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 103/348 (29%), Positives = 183/348 (52%), Gaps = 16/348 (4%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+ ++ +T+A+ L ++E +++++ IS + ++ P +LI+P +P+DPI + +P
Sbjct: 1 MLNENMTTAEQLQKHIFFREEHLEQLQRISKRFPFSIPPYYLSLIDPSDPHDPIRKMCVP 60
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+EL+ P R D G+ +++ L G+ H+Y L+ + C +YCR CFR+ +VG +
Sbjct: 61 ALDELD--PGGRLDTSGEASNTVLTGLQHKYRQTALVLSTNACAMYCRHCFRKRLVGLEG 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+D LAYI++ +I V+ +GGD L+ L + L+ L ++H+ ++R S
Sbjct: 119 RETRPRRD--KVLAYIRKHHEISNVLLSGGDALLNPTPVLHEYLEELSGMEHLDVVRICS 176
Query: 183 RVPIVDPQRI--NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R P+V P RI + +L+ KE G K + + NHP E S +A A+ L G+++
Sbjct: 177 RTPVVLPMRIYMDQKLLDLFKEYGAQKHLCLVTQFNHPRELSPQAQRALDALQECGVMVR 236
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIVASL 297
+Q+VLL G+ND L L++ V + PYY+ G +F++ I + IV
Sbjct: 237 NQTVLLHGVNDHGPTLGKLLKELVRRGVVPYYVFQCRPVTGVKNNFQVPIAQAYAIVEEA 296
Query: 298 KEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
K+ +GL + Y+ L GK++I + VGNG + H
Sbjct: 297 KQMQNGLGKAFRYV--LSHETGKIEI----LGPVGNGRWLFKYHQAKT 338
>gi|322514442|ref|ZP_08067484.1| KamA family protein [Actinobacillus ureae ATCC 25976]
gi|322119649|gb|EFX91711.1| KamA family protein [Actinobacillus ureae ATCC 25976]
Length = 333
Score = 314 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + ++ + +++ + + + NDP+ Q + E
Sbjct: 19 QAFNDPIALLEHLELNPKEFETAITARKLFALRVPRPFVGKMRKGDKNDPLFLQAMSAAE 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + +
Sbjct: 79 EFLQMQGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELNWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V I H NHP E E + +++L A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCNRLSKSRLKVVIVTHINHPNEVDEVLVDRLNQLRQANVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND+ + L L + + PYYLH D G SHF + ++ +I L+ SG
Sbjct: 256 GINDNAQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAREPNKT 330
>gi|71276242|ref|ZP_00652521.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon]
gi|71900995|ref|ZP_00683107.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
gi|170730740|ref|YP_001776173.1| hypothetical protein Xfasm12_1634 [Xylella fastidiosa M12]
gi|71163003|gb|EAO12726.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon]
gi|71729246|gb|EAO31365.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
gi|167965533|gb|ACA12543.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 357
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ + + ++L + + + + + + + + + +DP+ RQ +
Sbjct: 39 QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 98
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++
Sbjct: 99 PMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 158
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S A A+++ I EVI +GGDPL LS +L ++ LR I H++ LR H
Sbjct: 159 D--TASHDRWREAAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRSIAHLKRLRIH 216
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+
Sbjct: 217 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 276
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++
Sbjct: 277 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 336
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P ++ ++PG K +
Sbjct: 337 SGYLVPRFVREVPGDSSKRPL 357
>gi|116753457|ref|YP_842575.1| lysine 2,3-aminomutase YodO family protein [Methanosaeta
thermophila PT]
gi|116664908|gb|ABK13935.1| L-lysine 2,3-aminomutase [Methanosaeta thermophila PT]
Length = 392
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 96/339 (28%), Positives = 177/339 (52%), Gaps = 17/339 (5%)
Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68
D+ + +K+++ ++ ++ +++ + +LI+ ++P DP+ + IP E+
Sbjct: 2 RYVTDIMDVMQLKEDERKDLSSVTENFAFRASSYYLSLIDWNDPQDPLRKIVIPDANEMY 61
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
+DP + +++ L G+ H+Y L+ + + C CRFCFR+ +
Sbjct: 62 N--WGTKDPSRERSYTVLPGLQHKYRQTALMLVSNACGSLCRFCFRKRIFIDSHHETAI- 118
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
D AL YI+E +I V+ +GGDPL+LS +RL+++++ LR I HVQI+R +++P+ +
Sbjct: 119 -DLPRALDYIREHREITNVLLSGGDPLMLSTERLEEIVRRLRDIDHVQIIRIGTKLPVYN 177
Query: 189 PQRINPE--LIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
P RI + L++ +K +Y I NHP E S E + A+S+L AG I +SQ+ L
Sbjct: 178 PFRITEDPSLLEIVKRYSHENRRIYFVIQFNHPKEISSETLKAVSQLQEAGAITVSQTPL 237
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND+PE LA L + + + PYY+ + G HF++ +E IV K SG
Sbjct: 238 LRGVNDNPETLAQLFKKLSFIGVSPYYVFQCRPSIGNYHFQVPVETSYAIVEKAKSMCSG 297
Query: 304 LCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
L + ++ + GK+++ + + +
Sbjct: 298 LAKRAKFV--MSHATGKIEV-----VGLTDRYVYMKYAQ 329
>gi|56461377|ref|YP_156658.1| lysine 2,3-aminomutase [Idiomarina loihiensis L2TR]
gi|56180387|gb|AAV83109.1| Probable lysine 2,3-aminomutase [Idiomarina loihiensis L2TR]
Length = 348
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 97/330 (29%), Positives = 154/330 (46%), Gaps = 3/330 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ T ++L A + E + +++ + + + NDP+ RQ +P
Sbjct: 22 QAYTQPEELLRALKLDPALFSEDIKARKLFAMRVPKPFVAQMQVGDSNDPLLRQVLPLHN 81
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E P DP+ + P+ G++H+Y R+LL L C V CR+CFRR
Sbjct: 82 EFESEPGYSTDPLQEQQG-PVNGLLHKYKSRVLLILQGGCAVNCRYCFRRHFPYD--ELT 138
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
S + L YI++ +I EVI +GGDPL+ +RL+ ++ + + LR HSR+P
Sbjct: 139 FSKRQLTETLEYIRQHPEINEVILSGGDPLMAKDERLKGLINEFELLPQLTRLRIHSRLP 198
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P R+ +L + L + + +HANH E S E A+ +AGI LL+QSVLL
Sbjct: 199 VVIPSRLTHKLKEVLSNSRLQSVLVLHANHANEISPELAGALDDWHHAGIHLLNQSVLLS 258
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ L L R+ PYYLH D G SHF ++ E+ Q + + ++ G
Sbjct: 259 GVNDNLTALIELSEKLFSARVMPYYLHQLDKVEGASHFAVSDEKAQALWQKMTHELPGFL 318
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
P + + G K I +
Sbjct: 319 VPRLVREEAGELSKTAIMPDGTNTLTEEKL 348
>gi|85711842|ref|ZP_01042897.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145]
gi|85694239|gb|EAQ32182.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145]
Length = 340
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 157/324 (48%), Gaps = 6/324 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K+ + L + +E E +S + L+ NP DP+ RQ +P +
Sbjct: 18 KSYKDPRQLLTTLGLDPNAFNEHLEAKKLFSFRVPRPFVELMEAGNPQDPLLRQVLPLAD 77
Query: 66 ELNILPEEREDPIGD----NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
E + P DP+ + H+ +G++H+Y R+LL + C + CR+CFRR +
Sbjct: 78 EFTVTPGYSTDPLNEVTDKREHAVPQGLLHKYASRVLLLVQGACAINCRYCFRRHYPYAD 137
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
VL K + + Y+++ ++ EVI +GGDPL + L ++ L +K ++ LR H
Sbjct: 138 D--VLPRKQFDECVEYVRQNQEVNEVILSGGDPLFANDGYLIELADKLAELKQIKRLRIH 195
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V PQR+ L L + + V + IHANH E ++ G+ LL+QS
Sbjct: 196 SRLPVVLPQRLTERLATHLTQRFEQVILVIHANHANEIGSSLKQHLATWRQRGVTLLNQS 255
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK INDD + L+ L + + PYYLH D G +HF ++ +++ + ++
Sbjct: 256 VLLKAINDDADSLSQLSERLFDASVLPYYLHQLDPVQGAAHFAISDARARELWQQINARL 315
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
G P + ++P K I
Sbjct: 316 PGFLVPKLVREIPNRDSKTPIMPS 339
>gi|329894763|ref|ZP_08270564.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088]
gi|328922752|gb|EGG30085.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088]
Length = 335
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 102/316 (32%), Positives = 166/316 (52%), Gaps = 2/316 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ + +L A + + +D I + +++ + NP DP+ Q + +EE
Sbjct: 21 AIRDSAELLQAVGVPQSSLDTITGETAGFAVLAPRPFVARMEYGNPKDPLLLQVLALQEE 80
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + +P+ GI+H+Y R+LL C V CR+CFRR +L
Sbjct: 81 IAPNAVGTTDPLEEQRFTPVPGIIHKYFGRVLLMTAGTCAVNCRYCFRRHN--DYAQNIL 138
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ AL Y++ + I EVI +GGDPL+ S ++L +++ L I H+Q LR H+R+PI
Sbjct: 139 TPARLNEALTYLRSQRDITEVILSGGDPLLTSDRKLSELVAELEAIPHIQRLRIHTRLPI 198
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI EL Q L ++ V + +H NHP E E A+++L GI LL+Q+VLLK
Sbjct: 199 VIPQRITTELCQRLGQSRFQVTLVVHCNHPKELDVEVGLAMAQLKAQGITLLNQTVLLKN 258
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IN+ L L ++ + PYYLH D G +HF + + +++ +L+ ++ G
Sbjct: 259 INNCAATLETLSVELFKIGVLPYYLHTLDPVQGAAHFAQPMGDSKQLHQTLQARLPGYLV 318
Query: 307 PFYILDLPGGYGKVKI 322
P + ++PGG K I
Sbjct: 319 PKLVSEIPGGASKTLI 334
>gi|289207649|ref|YP_003459715.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp.
K90mix]
gi|288943280|gb|ADC70979.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp.
K90mix]
Length = 348
Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats.
Identities = 107/320 (33%), Positives = 169/320 (52%), Gaps = 2/320 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + L + + + + + + + +P DP+ Q +
Sbjct: 26 QALARAIRDPVTLARELELDPAHLPGLHAGHTLFRVRVPRSYLARMRKADPQDPLLLQVL 85
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
PQ++E P DP+GD++ G+VH+Y R+LL C V+CR+CFRRE ++
Sbjct: 86 PQQQESEEHPGFVADPVGDHDALAAPGLVHKYHGRVLLLTTGACAVHCRYCFRREFPYAE 145
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S D A+AYI + I EVI +GGDPL LS +RL +++ L I H++ LR H
Sbjct: 146 HNA--SQDDWAPAIAYIHADTSIREVILSGGDPLSLSDRRLADLVRRLEAIPHLERLRIH 203
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+P+V P+R++ +L+ L + + +HANHP EF++ A A++RL GI LL+Q+
Sbjct: 204 TRLPVVLPERVDEQLLSWLGKGRLHHVLVLHANHPREFADPAAPALARLQARGITLLNQA 263
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GINDDP+ L L + PYYLH D GT+HF +T ++ +L ++
Sbjct: 264 VLLAGINDDPDTLCELQEAGFRHGVLPYYLHLLDRTRGTAHFEVTEHRALELHQALHARL 323
Query: 302 SGLCQPFYILDLPGGYGKVK 321
G P + ++PG GK
Sbjct: 324 PGYLVPRLVREIPGEPGKTP 343
>gi|21243115|ref|NP_642697.1| hypothetical protein XAC2381 [Xanthomonas axonopodis pv. citri str.
306]
gi|21108633|gb|AAM37233.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 342
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + L + + + + + + + + +DP+ RQ +
Sbjct: 24 QQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ P D +GD G++ +Y R LL C +CR+CFRR ++
Sbjct: 84 PLDAEMQPAPGFGLDAVGDGAARTAAGVIQKYRGRALLIATGSCAAHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EV+ +GGDPL L+ +L ++ L + H++ LR H
Sbjct: 144 E--TAARDGWRDAVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+PIV P+R++ L L+ PV +HANH EF AA L G LL+Q+
Sbjct: 202 SRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLRETGAQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA L + PYYLH D AG +HF + + + A L ++
Sbjct: 262 VLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAARL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++PG GK +
Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342
>gi|15839064|ref|NP_299752.1| hypothetical protein XF2474 [Xylella fastidiosa 9a5c]
gi|9107671|gb|AAF85272.1|AE004055_10 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 357
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ + + ++L + + + + + + + + + +DP+ RQ +
Sbjct: 39 QVWREAIRDPRELLALLRLDPTSVGISEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 98
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++
Sbjct: 99 PMDAEEDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 158
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S A A+++ I EVI +GGDPL LS +L ++ LR I H++ LR H
Sbjct: 159 D--TASHDRWREAAAFVRADPLIEEVILSGGDPLSLSTAKLVELTDALRSIPHLKRLRIH 216
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+
Sbjct: 217 SRLPVVLPERIDTPLLEWLGALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 276
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++
Sbjct: 277 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARALHAELVARL 336
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P ++ ++PG K +
Sbjct: 337 SGYLVPRFVREVPGDSSKRPL 357
>gi|262368517|ref|ZP_06061846.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046]
gi|262316195|gb|EEY97233.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046]
Length = 338
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 99/316 (31%), Positives = 157/316 (49%), Gaps = 3/316 (0%)
Query: 8 LTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L N I EQ+ S + + + + NP DP+ Q +P E
Sbjct: 19 ITDPLELLNILEISPEQLLSGALLASTQFKLRVPRAFVTRMQKGNPLDPLLLQVLPHHLE 78
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P+ DP+G+ + G++H+Y R LL L C V+CR+CFRR + +
Sbjct: 79 LEEHPDFVTDPLGEEQANQQPGVLHKYKTRFLLTLTGACAVHCRYCFRRHFPYQEN--LP 136
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S+D YIQ + I EVI +GGDPL LS+++++ ++ L I ++ LR HSRVPI
Sbjct: 137 KSEDWINIQHYIQSQPDINEVILSGGDPLTLSNRKIKLWIERLESIPQLKFLRIHSRVPI 196
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R++ ELI LK + + + +H+NH E + + + I + +Q+VLLKG
Sbjct: 197 VMPNRVDDELISILKNSRLRIILVVHSNHASELDDFTCRQLQQFVAEKITVFNQAVLLKG 256
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND +IL +L + + PYYLH D G HF L ++ + L + G
Sbjct: 257 VNDHVQILTDLSYRLFDAGVLPYYLHVLDKVKGAHHFDLNPQDIDFLYQGLLANLPGYLV 316
Query: 307 PFYILDLPGGYGKVKI 322
P + ++ G K +
Sbjct: 317 PKLVREIAGEKNKTPL 332
>gi|15606739|ref|NP_214119.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5]
gi|4033496|sp|O67554|Y1632_AQUAE RecName: Full=Uncharacterized KamA family protein aq_1632
gi|2983974|gb|AAC07521.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5]
Length = 374
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 105/319 (32%), Positives = 164/319 (51%), Gaps = 18/319 (5%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+++ ++ +LIN NPNDPI R IP EEL + + D ++ + + G+
Sbjct: 27 KVTEKFAFRTNTYYNSLINWDNPNDPIRRIVIPTTEELEV--WGKLDASNESKYMKVHGL 84
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
H+YPD LL + VC +YCRFCFR+ + + V +D L YI+ +I V+
Sbjct: 85 EHKYPDTALLLVTDVCGIYCRFCFRKRLFMNDNDEVA--RDVSEGLEYIRNHPEINNVLL 142
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP-----ELIQCL-KEA 203
TGGDPLIL+ +L+K+LK L I HV+I+R S++ V+P R+ EL + E
Sbjct: 143 TGGDPLILATFKLEKILKALAEIPHVRIVRIGSKMLAVNPFRVLDDPKLLELFEWFNTET 202
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
GK +Y+ H NHP E ++EA A+ + G L +Q+ +LKGINDD E L L+
Sbjct: 203 GKKLYLMNHFNHPRELTKEARKAVELVQKTGTTLTNQTPILKGINDDFETLKTLLEELSF 262
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKI 322
+ + PYY+ AG + IEE +V +++ ++SGL Y+ + GK++I
Sbjct: 263 IGVPPYYVFQCRPTAGNKAYSTPIEETIDLVEAVRAEVSGLAARVRYV--MSHETGKIEI 320
Query: 323 DTHNIKKVGNGSYCITDHH 341
+ H
Sbjct: 321 -----LGKTDEHIFFRYHR 334
>gi|160872273|ref|ZP_02062405.1| radical SAM domain protein [Rickettsiella grylli]
gi|159121072|gb|EDP46410.1| radical SAM domain protein [Rickettsiella grylli]
Length = 328
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 159/319 (49%), Gaps = 2/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +L + + + + + S + + + + + NP DP+ +Q +P E
Sbjct: 12 AVADPAELLDRLALNPQLLSAAQHASRLFPLRVPSGFIDRMQKGNPADPLLQQVLPIAAE 71
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I + +DP+ +N +PL G++H+Y RILL + C + CR+CFRR +
Sbjct: 72 ARIQADFSDDPLQENAANPLPGLLHKYYGRILLTMTGACAINCRYCFRRHFPY--GKNKV 129
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K A +AYIQ + I EVI +GGDPL+ L+ + L I HV+I+R HSR+PI
Sbjct: 130 GGKAWHAIVAYIQADTSIREVILSGGDPLLAQDDYLKHRINDLAAIPHVKIVRIHSRLPI 189
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ L+ L + H NH E ++ AI + I +L+Q+VLLKG
Sbjct: 190 VIPERMTTPLLNALTGTRLQPVLVTHCNHANELNDSVQQAIEKCRQRKIHVLNQAVLLKG 249
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L +L E I PYYLH D G +HF + E+ + ++ +L+E++ G
Sbjct: 250 VNDSVEALVHLSERLFECGILPYYLHRLDKVQGATHFTVNEEKMKPLLKALRERLPGYLV 309
Query: 307 PFYILDLPGGYGKVKIDTH 325
P + + G K+
Sbjct: 310 PKCVYEQAGALSKMPFMED 328
>gi|268323521|emb|CBH37109.1| conserved hypothetical protein [uncultured archaeon]
Length = 366
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 105/347 (30%), Positives = 184/347 (53%), Gaps = 18/347 (5%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++++ L + + E +++EI + + +T +LI+ ++PNDPI R +P +EE
Sbjct: 10 SISTISQLGDYIELTPEMEQQLQEIVAIHPMRITQYYMSLIDKNDPNDPIRRMTVPSEEE 69
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
LN D G+ ++ + G+ H+Y L+ + C YCR+CFR+ +VG +L
Sbjct: 70 LN--LLGSYDTSGERENTMMPGLQHKYAQTALILATNRCATYCRYCFRKRLVGLPTEEIL 127
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ A+ YI+ +I V+ +GGDP +LS +++ L+ L I H+ +RF +RVP+
Sbjct: 128 --QRFNDAVKYIENHEEINNVLISGGDPFVLSTGVVKEFLEKLSTISHLDFIRFGTRVPV 185
Query: 187 VDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
P RI + EL+ L++ + +Y+ NHP E +++A A+SRL +G+IL +Q+
Sbjct: 186 TFPDRIIEDDELLTLLEKNSQENRRIYVVTQFNHPREITQKATDAVSRLIRSGVILDNQT 245
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIVASLKEK 300
VLLKG+NDDPE LA L V + + PYY+ +F++ + +G +IV K+K
Sbjct: 246 VLLKGVNDDPETLAELQNKLVSIGVNPYYVFQCRPVKRVKNNFQVPLYKGYEIVDRAKKK 305
Query: 301 ISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
++G + YI + GK++I V + H +
Sbjct: 306 LNGHSKRFKYI--MSHQTGKIEI-----VGVMEDYIYLKYHQARATE 345
>gi|88798858|ref|ZP_01114440.1| radical SAM domain protein [Reinekea sp. MED297]
gi|88778338|gb|EAR09531.1| radical SAM domain protein [Reinekea sp. MED297]
Length = 346
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 166/319 (52%), Gaps = 2/319 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + +L + +K ++ + ++ + + +T +A+L+ NP DP+ Q IP+ +
Sbjct: 30 KGFRTPSELLDYLNLKTSELPYQIDPNSPFRMRITRHLASLMEKGNPFDPLLLQLIPRLD 89
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E P + DP+ + ++ + G++H+Y +R+L+ C ++CR+CFRR S
Sbjct: 90 ETTEQPGYQTDPLMEEDYQVIPGLIHKYQNRVLIIAHQACAIHCRYCFRRHFPYS--EAR 147
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS +A YIQ S I EVIF+GGDPL L+ + L +++ + +Q +R H+R P
Sbjct: 148 LSESSLDAIEQYIQSHSDIDEVIFSGGDPLSLADEALSNLIQRFDRLPQIQTVRLHTRTP 207
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ P+RI L+ L V + +H NHP E + +A RL + + LL+QSVLL+
Sbjct: 208 VAAPERITETLLNTLNNLSCQVVMVVHINHPNELHPDLLAKFLRLRDINVTLLNQSVLLR 267
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND + L + + PYYLH D GTSHF + + +I ++ +SG
Sbjct: 268 GINDCSKTQIRLCKQLFAHGVLPYYLHSLDPVQGTSHFDVNQQTAGQIWLEMQAGLSGYL 327
Query: 306 QPFYILDLPGGYGKVKIDT 324
P + ++P + K I
Sbjct: 328 LPRLVREIPQRHSKTWIHP 346
>gi|84624209|ref|YP_451581.1| hypothetical protein XOO_2552 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368149|dbj|BAE69307.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 342
Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + L + + + + + + + + +DP+ RQ +
Sbjct: 24 QQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ +P D +GD G++ +Y R LL C V+CR+CFRR ++
Sbjct: 84 PLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR H
Sbjct: 144 E--TAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+PIV P+R++ L+ L+ P +HANH EF A+ L + G LL+Q+
Sbjct: 202 SRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+ND + LA L + PYYLH D AG +HF + + + L ++
Sbjct: 262 VLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATRL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++PG GK +
Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342
>gi|332289569|ref|YP_004420421.1| conserved hypothetical protein, radical SAM superfamily
[Gallibacterium anatis UMN179]
gi|330432465|gb|AEC17524.1| conserved hypothetical protein, radical SAM superfamily
[Gallibacterium anatis UMN179]
Length = 332
Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 148/314 (47%), Gaps = 3/314 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L + E + +++ + N + N NDP+ Q + E
Sbjct: 19 AVSDPIQLLTLLNLPLEPYQQHLAARRLFAMRVPMPFINKMEKGNANDPLFLQVMTDAAE 78
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P +DP+ + + + ++H+Y +R+LL + C V CR+CFRR
Sbjct: 79 FLQTPGFVKDPLQEQ-DNAIPNLLHKYHNRVLLMVKGGCAVNCRYCFRRHFPYEANPG-- 135
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ L YI + S+I EVIF+GGDPL+ + L +L+ L I H++ +R HSR+P+
Sbjct: 136 NKASWRKTLDYIAQHSEIEEVIFSGGDPLMAKDRELAWLLEQLNQIPHLKTVRIHSRLPV 195
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI PEL + L ++ + +H NH E E + L AG+ LL+QSVLLKG
Sbjct: 196 VIPQRITPELCRSLADSPLNKVLVLHINHANEIDELLSRQLQPLKQAGVTLLNQSVLLKG 255
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD IL L I PYYLH D G SHF + E I L SG
Sbjct: 256 INDDAHILKALNDKLFATGILPYYLHLLDKVEGASHFWIDDERALAIYRQLITLSSGYLV 315
Query: 307 PFYILDLPGGYGKV 320
P ++ G K
Sbjct: 316 PKLAREIAGEKSKT 329
>gi|87118912|ref|ZP_01074811.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121]
gi|86166546|gb|EAQ67812.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121]
Length = 351
Score = 311 bits (798), Expect = 9e-83, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 163/324 (50%), Gaps = 3/324 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
++++H + L + + K + + + I N NDP+ RQ
Sbjct: 25 LEIKH-AIKDLDTLAKKLNLNLTSVLTGKHAHKAFQLMVPMPYLERIEKGNLNDPLLRQI 83
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE+ + DP+ + +H+P K +VH+Y RIL+ C + CR+CFRR +
Sbjct: 84 LPIDEEMKQVKGYVTDPLAELDHNPKKALVHKYSSRILVITSGSCAINCRYCFRRHFPYA 143
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
L+ + ++ L+YIQ QI EVI +GGDPL++ K+L +++ L + ++ LR
Sbjct: 144 NN--HLAPAEWDSLLSYIQTHPQINEVILSGGDPLMMKDKQLSQLISRLEALPQLKRLRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+R+PIV P RIN EL+ + V + +H NH E + I A S+LA G+ LL+Q
Sbjct: 202 HTRLPIVIPSRINNELLNWASQTRLKVIMVLHINHANEIDGKVIEACSKLAKIGVRLLNQ 261
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
V+LK +ND E L + I PYY+ D G SHF +TI++ Q+++ +
Sbjct: 262 GVILKNVNDTAEAQIALSEALFDADILPYYMFTLDPVEGASHFDITIDQAQQLMGQVAAN 321
Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324
+ G P ++PG K
Sbjct: 322 LPGYLVPKLAKEIPGKTAKTLFAP 345
>gi|149196362|ref|ZP_01873417.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155]
gi|149140623|gb|EDM29021.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155]
Length = 341
Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats.
Identities = 154/340 (45%), Positives = 220/340 (64%), Gaps = 6/340 (1%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + + L LI + D + ++ + I+L+P + I P I +Q++P KEEL
Sbjct: 4 IRNTKALQEQGLISADDTDLLNRVAEKFQISLSPEVIKNI--AEPE--IRQQYLPTKEEL 59
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
I EE DPIGD +P+KGI HRYPDR+LLK LH C VYCRFCFRRE VG Q +L
Sbjct: 60 EIQEEELNDPIGDEKFTPVKGITHRYPDRVLLKPLHTCNVYCRFCFRREKVG-QADEILK 118
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ E AL YI+E+ ++WEVI TGGDPL LS +L +L L I HV+++R H+R+P+V
Sbjct: 119 QDELENALNYIRERQEVWEVILTGGDPLSLSADKLASILDQLEAIDHVKVIRIHTRIPLV 178
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P++I+ EL++ L + K +Y+ +H N E S+ I +L+ AGI LLSQSVLLK I
Sbjct: 179 APEKISDELLKVL-DREKALYMILHCNSHKELSDNVCFGIKKLSRAGIPLLSQSVLLKNI 237
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND E L L R+ V +R++PYYLHHPDLA GTSHFR+++E+G+++ + L++ +SG+ QP
Sbjct: 238 NDSVEKLEKLFRSLVAIRVRPYYLHHPDLAQGTSHFRVSLEKGRQVTSELRKSLSGIAQP 297
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
Y+LD+PGG GKV I+ + ++ I H+ DY
Sbjct: 298 LYVLDVPGGLGKVPAGKEFIQAKDDKTWKIQTIHDTFVDY 337
>gi|297620566|ref|YP_003708703.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044]
gi|297375867|gb|ADI37697.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044]
Length = 327
Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats.
Identities = 104/322 (32%), Positives = 169/322 (52%), Gaps = 6/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++ + T+ + L + + + EI + + + + L +A I N NDPI RQF+
Sbjct: 12 QIQRQNFTNWEKLADFLELDEFHRQEIMK-NPRFVLNLPIRLAKKIEKGNLNDPILRQFL 70
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ DP+GD+ ++H+Y R+LL C ++CR+CFR+
Sbjct: 71 PMVAEMVETAGFVSDPVGDHACRKASKLLHKYNGRVLLVSTSACAMHCRYCFRQNFDYEV 130
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + L I + I EVI +GGDPL LS++ L +L+ + I H+ LRFH
Sbjct: 131 EDKTFDEE-----LEVISKDETIKEVILSGGDPLSLSNRHLGALLEKISAIPHINRLRFH 185
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR PI P+RI+ E ++ + V+ IH NHP E ++ ++ L G+ +L+Q+
Sbjct: 186 SRFPIGIPERIDDEFLEAVDRLPHQVWFVIHCNHPRELDKDIFDRLNTLRKLGVNILNQA 245
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+NDD + LA L T + I PYYLH D G SHF ++ EEG +++ L ++
Sbjct: 246 VLLRGVNDDADTLAELCETLSDHGIFPYYLHQLDRVQGASHFEVSKEEGLQLIDQLTRRL 305
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
G P Y+ ++ G K ++
Sbjct: 306 PGYAVPKYVQEIAGEPSKTPLN 327
>gi|256827853|ref|YP_003156581.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
gi|256577029|gb|ACU88165.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
Length = 520
Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats.
Identities = 103/353 (29%), Positives = 172/353 (48%), Gaps = 11/353 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLRH + + L + + I+++ ++ Y + LTP A+LI P NDP+ Q +
Sbjct: 158 QLRH-AIEDVETLSKVVDLPAKAIEDVLRVTRTYRMRLTPYYASLILPGQVNDPVLLQAV 216
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ++ E P +HSP + I YP + +K ++C +YC C R +G+
Sbjct: 217 PTGEMVDNAGVE--IPPVAADHSPARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIGA- 273
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K + + AL YI+ +I +V+ TGGD L+L + L+ +L L I+HV++ R
Sbjct: 274 KDRLYGKEAYGEALEYIRANPEIRDVLITGGDSLVLPNSMLEWLLGQLDAIEHVRMKRLG 333
Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R+P+ PQRI+ EL+ L+ + KP+ + N E + + AA ++ +++
Sbjct: 334 TRIPVTTPQRIDSELLDILEASSDKKPLRVVTQINTAQEITPVSKAAFQAISKRVAAVMN 393
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLK 298
Q+VLLKGIND + L T E ++PYY+ + H R+ + GQ I+ S+
Sbjct: 394 QAVLLKGINDSSVKMWKLCETIQEAYVRPYYVFNCSYRNPQFKHLRVPVAVGQSIIESMY 453
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD-HHNIVHDYPPK 350
ISG P Y + GK+ + N+ + G G + YP
Sbjct: 454 GNISGDAIPRY---IATAGGKIPLHRTNVLEHGQGYVKMQKPWSGEQVSYPDP 503
>gi|114319844|ref|YP_741527.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226238|gb|ABI56037.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
Length = 348
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 157/319 (49%), Gaps = 3/319 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + ++L + + + + + + + I P +P+DP+ RQ +P
Sbjct: 20 RAVRDPRELLQRLDLPMTLLPAAESAARLFPLRVPEPWLARIRPGDPDDPLLRQVLPLAA 79
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E DP+GD G++H+Y R+LL C ++CR+CFRR +
Sbjct: 80 EHETPAGFTADPVGDAAAEANPGLLHKYHGRVLLITTGACAIHCRYCFRRHFPY--TESQ 137
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
D A LA++ ++ EVI +GGDPL LS +RL + + L V+ LR H+R+P
Sbjct: 138 AGRDDWRATLAWLDAHPEVDEVILSGGDPLTLSDRRLATLTEALAQRPQVRRLRLHTRLP 197
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI P L+ LK + V++ H+NH E A++RL AG LL+Q+VLL+
Sbjct: 198 VVLPDRITPGLMALLKGPWEVVWVI-HSNHAQELDSTVAGALARLREAGHWLLNQTVLLR 256
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
INDD + LA L R +L + PYYLH D G +HF +T + + A L ++ G
Sbjct: 257 RINDDADTLAALSRQLFQLGVLPYYLHLLDRVQGAAHFEVTELRARALAAELAARLPGYL 316
Query: 306 QPFYILDLPGGYGKVKIDT 324
P + + G K +
Sbjct: 317 VPRLVREEAGEPAKTPVTP 335
>gi|28199372|ref|NP_779686.1| hypothetical protein PD1491 [Xylella fastidiosa Temecula1]
gi|182682099|ref|YP_001830259.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23]
gi|28057478|gb|AAO29335.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182632209|gb|ACB92985.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23]
gi|307578366|gb|ADN62335.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 342
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 99/321 (30%), Positives = 160/321 (49%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ + + ++L + + + + + + + + + +DP+ RQ +
Sbjct: 24 QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVTRMRVGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++
Sbjct: 84 PMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S A A+++ I EVI +GGDPL LS +L ++ LR H++ LR H
Sbjct: 144 D--TASHDRWREAAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGTPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+
Sbjct: 202 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++
Sbjct: 262 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P ++ ++PG K +
Sbjct: 322 SGYLVPRFVREVPGDSSKRPL 342
>gi|238757499|ref|ZP_04618684.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC
35236]
gi|238704261|gb|EEP96793.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC
35236]
Length = 284
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 93/285 (32%), Positives = 153/285 (53%), Gaps = 3/285 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P DP+ + S + G++H+Y +R LL + C
Sbjct: 1 MQPGNPSDPLLLQVLTAQEEFITAPGFTTDPLDEQ-RSVVPGLLHKYRNRALLLVKSGCA 59
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + AL YI++ ++ E+IF+GGDPL+ + L +L
Sbjct: 60 VNCRYCFRRHFPYQDNQG--NKANWRQALDYIRQHPELDEIIFSGGDPLMANDSELSWLL 117
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ I H++ LR H+R+P+V P RI L Q L + V + H NH E + +
Sbjct: 118 DEIESISHIKRLRIHTRLPVVIPARITANLCQRLSNSRLQVLMVTHINHANEIDQSLRNS 177
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+++L AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF +
Sbjct: 178 MAQLKRAGVTLLNQSVLLRGVNNDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVD 237
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
+E ++++ L ++SG P ++ G K +D I+
Sbjct: 238 DDEARQLMKGLLSRVSGYLVPRLTREIGGEPSKTPLDLRLIQSES 282
>gi|27904534|ref|NP_777660.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|46397205|sp|Q89B32|Y022_BUCBP RecName: Full=Uncharacterized KamA family protein bbp_022
gi|27903931|gb|AAO26765.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 340
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 169/320 (52%), Gaps = 3/320 (0%)
Query: 7 TLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+T+ +L + + + ++ +S+ + + + ++P DP+ Q +P +
Sbjct: 21 AITNPDELLRTLNLKSNTKYFKNIQVQKLFSLRVPKTFVSRMKKNDPFDPLLLQILPHTK 80
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL +DP+ + + + G++ +Y +RILL L C + CR+CFRR SQ
Sbjct: 81 ELKNNHNFVQDPLEETKNVIIPGLIRKYNNRILLLLKTNCAINCRYCFRRYFPYSQHPG- 139
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ ++ A+ YI+ ++ + EVI +GGDPL+ +Q ++ TL I H++ LR H+R+P
Sbjct: 140 -NKENLNLAIQYIKNQTDLNEVILSGGDPLMAKDHEIQWIVNTLSNIYHIKRLRIHTRLP 198
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
IV P RI L + L + I H NH E + E I++L GI LL+QSVLL+
Sbjct: 199 IVIPSRITNNLCKILSTTRLKILIVTHINHAQEINHELQYNINKLHKLGITLLNQSVLLR 258
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND+ +IL+ L ++ I PYYLH D T+HF ++ ++ IV L ISG
Sbjct: 259 GINDNAKILSQLSNKLFDINILPYYLHILDKVKSTTHFYVSEKQASIIVVELLSMISGFL 318
Query: 306 QPFYILDLPGGYGKVKIDTH 325
P + + PG K+ I+ +
Sbjct: 319 VPKLVCEHPGKNSKIYINLN 338
>gi|254283526|ref|ZP_04958494.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR51-B]
gi|219679729|gb|EED36078.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR51-B]
Length = 356
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 101/328 (30%), Positives = 158/328 (48%), Gaps = 12/328 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQID---------EIKEISNHYSIALTPVIANLINPHNP 52
QLR+ + S L ++ + ++ + + + + + + + P +P
Sbjct: 23 QLRN-AVRSVSALLDSLNLTPADVEHGEPKTRGEDAERAAQDFPVRAPQSFIDRMRPGDP 81
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
NDP+ RQ + E +P EDP+ + + +P GIVH+Y R+LL C V+CR+C
Sbjct: 82 NDPLLRQVLAVSAEQQHVPGYVEDPLQERDANPTPGIVHKYQGRLLLMPTAACAVHCRYC 141
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR + L + A+ Y+ + ++ EVI +GGDPLIL L +++ L +
Sbjct: 142 FRRHFPYADN--RLDEGALDRAMDYLASQPEVTEVILSGGDPLILDDAALGRLIDRLESL 199
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H+ LR HSR+P+V P R+ L + L + + +H NHP E + R
Sbjct: 200 GHLSRLRIHSRLPVVLPDRLTEALAERLDASRLSTSLVLHGNHPAEIDAGLTERLQRWRP 259
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
A + LL+QSVLL G+NDDP +L L E + PYYLH D AG HF + E+
Sbjct: 260 ASLTLLNQSVLLAGVNDDPAVLIALSERLFEAGVLPYYLHLLDPVAGVGHFAVADEQALA 319
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKV 320
I + K+ G P +LP K
Sbjct: 320 IYRQMAAKLPGYLLPKLARELPDLPSKT 347
>gi|332977595|gb|EGK14363.1| KamA family protein [Psychrobacter sp. 1501(2011)]
Length = 371
Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 157/316 (49%), Gaps = 4/316 (1%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T L + + + I + + + + +P DP+ Q +P K E
Sbjct: 55 ITDIDQLLAILELSDIKSELY--IPKGFGLRVPKAFVAKMKKGDPKDPLLLQVLPSKLEQ 112
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ DP+ +N +P+KG++H+Y R+L+ + C ++CR+CFR+ +G +
Sbjct: 113 AKISGYVTDPLAENEQNPIKGLLHKYHSRVLVTVTGACAIHCRYCFRQHF--DYQGNLPK 170
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
S+ E YI + +I EV+ +GGDPL LS++RL L L + + +R H+R+PIV
Sbjct: 171 SEQLELIQDYISQHPEIREVLLSGGDPLSLSNRRLFLWLDALEALPQISTIRIHTRLPIV 230
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+R++ EL+ L+ + + + +H NH E E + + GI LL+Q+VLL GI
Sbjct: 231 IPERLDSELLSRLQASRCRIVMVVHTNHANEIDEHTANYLLQARQKGITLLNQTVLLAGI 290
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + +L + PYYLH D G +HF +T ++ + +++ G P
Sbjct: 291 NDSVSVQVDLSERLFAAGVLPYYLHLLDKVEGAAHFDMTQRRAVELYWEMLQQLPGYLVP 350
Query: 308 FYILDLPGGYGKVKID 323
+ +LP K +D
Sbjct: 351 KLVQELPNRPFKTPVD 366
>gi|288941476|ref|YP_003443716.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum
DSM 180]
gi|288896848|gb|ADC62684.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum
DSM 180]
Length = 335
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 101/319 (31%), Positives = 158/319 (49%), Gaps = 2/319 (0%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R T +L + + +I ++ + + + + +P+DP+ RQ +P
Sbjct: 18 RVTAFTQVDELLAFLELDRTRIPDLDAEPESWGLRVPRTFVERMRRGDPDDPLLRQVLPL 77
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
E + DP+GD G++ +Y R LL + C ++CR+CFRR G
Sbjct: 78 TAERQQVAGYVTDPVGDACAERAPGLLVKYAGRALLMVTGACAIHCRYCFRRHFPYQDLG 137
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
S E AL I + EV+ +GGDPL+L RL +++ L I H+Q LR HSR
Sbjct: 138 --PSQARLERALDEIARDPSLTEVVLSGGDPLMLDDDRLDALIRDLECITHLQRLRLHSR 195
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+V P R+ L L + IHANHP E E +A+ AG+ LL+QSVL
Sbjct: 196 VPVVSPSRLTARLAASLTRGRFASTLVIHANHPRELDEVVRSALLDWRAAGVTLLNQSVL 255
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND EILA L + PYYLH D AG++HF + E ++++ ++ ++ G
Sbjct: 256 LRGVNDRIEILAELSERLFACGVLPYYLHGLDPVAGSAHFEVDDAEARRLLDGVRARLPG 315
Query: 304 LCQPFYILDLPGGYGKVKI 322
P + ++PG + K +
Sbjct: 316 YLVPRLVREIPGDHSKRPL 334
>gi|71898719|ref|ZP_00680888.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
gi|71731484|gb|EAO33546.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
Length = 342
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 98/321 (30%), Positives = 159/321 (49%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ + + ++L + + + + + + + + + +DP+ RQ +
Sbjct: 24 QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++
Sbjct: 84 PIDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S A+++ I EVI +GGDPL LS +L ++ LR H++ LR H
Sbjct: 144 D--TASHDRWRETAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGTPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+
Sbjct: 202 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++
Sbjct: 262 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P ++ ++PG K +
Sbjct: 322 SGYLVPRFVREVPGDSSKRPL 342
>gi|126179733|ref|YP_001047698.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus
marisnigri JR1]
gi|125862527|gb|ABN57716.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1]
Length = 386
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 97/336 (28%), Positives = 170/336 (50%), Gaps = 15/336 (4%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
L + I E+ + E+++ ++ +LI+ +P DPI R +P EEL
Sbjct: 20 VSSLDSVPGIDPEERARLAEVTDLFAFRANDYYLSLIDWDDPADPIRRLIVPTVEELE-- 77
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
P DP ++ ++ G+ H+Y + LL + +C CR+CFR+ + + V +KD
Sbjct: 78 PWGHLDPSSEHRYTRAPGLQHKYRETALLLVSDLCGGLCRYCFRKRLFIEEAREV--NKD 135
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
A LAYI++ +I V+ TGGDPL L R+ +++ +R I+HV I+R +++P +P
Sbjct: 136 ISAGLAYIRDHPEITNVLLTGGDPLFLETGRVLDIVRQVREIEHVGIIRIGTKMPAYNPF 195
Query: 191 RI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
RI +P L+ +++ K +YI NHP E ++ A A++ L AG ++++Q+ L++
Sbjct: 196 RIINDPALLDMIRDYSMDEKRIYIMAQFNHPRELTDAACRAVALLQEAGAVVMNQTPLIR 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GINDDPE+LA L + PYY+ A G F + +EE +I + SGL
Sbjct: 256 GINDDPEVLAALFDKLSFIGANPYYVFQCRPAIGNRTFAVPVEESYRIFEQARSICSGLA 315
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ + + GK+++ + +
Sbjct: 316 KRARFV-ISHATGKIEV-----LGKTDRYTYFKYNQ 345
>gi|283780175|ref|YP_003370930.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
gi|283438628|gb|ADB17070.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
Length = 370
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 101/336 (30%), Positives = 167/336 (49%), Gaps = 20/336 (5%)
Query: 5 HKTLTSAQDLYNANLI--KKEQIDE----------------IKEISNHYSIALTPVIANL 46
++L + +L A + E + + + + + + +
Sbjct: 37 RESLRTLPELLEAVGLTKSPEHLAATSIAGPSGAIDPAFVPLDAAAEQFRVLVPGPYLSR 96
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q +P E++ + DP+GD L G++ +Y R L+ L C
Sbjct: 97 IERGNPADPLLLQVLPVAGEMSSPADFLTDPVGDRESERLPGLLQKYDGRALMILSGSCA 156
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR + L + A+ I + EVI +GGDPL + L ++
Sbjct: 157 VHCRYCFRRHYPYDETPRGL--AGWQPAIDEIAADESVQEVILSGGDPLTIVDSTLAELA 214
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
I H++ LR HSRVP+V P+R+N ELI ++ Y+ +H NHP E AA
Sbjct: 215 HRFAEIPHLKRLRVHSRVPVVIPERVNDELIGWMRGTRLAPYMVVHINHPREIDSAVAAA 274
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
++RL +AGI++++Q+VLL+G+ND+ E L L T V +R+ PYYL D AG +HF +
Sbjct: 275 LARLVDAGIVVMNQAVLLRGVNDNFEALHELCETLVNMRVLPYYLSQLDRVAGAAHFLVE 334
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
G++++ L+ + G P Y+ ++PG K +
Sbjct: 335 ESRGRELIEQLRASLPGYAIPRYVAEIPGRSSKSPL 370
>gi|93006773|ref|YP_581210.1| hypothetical protein Pcryo_1949 [Psychrobacter cryohalolentis K5]
gi|92394451|gb|ABE75726.1| L-lysine 2,3-aminomutase [Psychrobacter cryohalolentis K5]
Length = 335
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 162/317 (51%), Gaps = 4/317 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+TS +L ++ + + + H+ + + + + +DP+ RQ +P +E
Sbjct: 18 AITSIDELLEILELQSLRSEVY--VPKHFELRVPRAFVAKMTVGDRDDPLLRQVLPNHKE 75
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ +N H+P+KG++H+Y R+LL + C ++CR+CFR+ S
Sbjct: 76 QMAVAGYVADPLAENAHNPVKGVLHKYQSRLLLTITGACAIHCRYCFRQHFDYSANMPTA 135
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S+K + YI +I EVI +GGDPL ++++RL L TL I + +R H+R+P+
Sbjct: 136 SAKQ--DIIDYISAHPEINEVILSGGDPLNVTNRRLFAWLDTLEAIGQLTTIRIHTRLPL 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R++ L++ L ++ + + IH NH E + R AGI LL+Q+VLLKG
Sbjct: 194 VIPARLDDALLERLAQSRCQIVMVIHGNHANEIDALTAEYLQRARAAGITLLNQAVLLKG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND L + + PYYLH D AG +HF E ++ SL K+ G
Sbjct: 254 INDSVSAQTALSQRLFAAGVLPYYLHVLDKVAGAAHFDSDEEFAIELYWSLLAKLPGYLV 313
Query: 307 PFYILDLPGGYGKVKID 323
P + +LP KV I+
Sbjct: 314 PKLVRELPNEPFKVPIN 330
>gi|301166960|emb|CBW26539.1| putative L-lysine 2,3-aminomutase [Bacteriovorax marinus SJ]
Length = 447
Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats.
Identities = 94/373 (25%), Positives = 188/373 (50%), Gaps = 25/373 (6%)
Query: 2 QLRHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDPI 56
QL++ ++ + + I KE +D+IK + +TP I LI+ +P + P+
Sbjct: 43 QLKN-SIRKVEQVEKVLGSKISKEHMDDIKAGQKITPMNIRITPYIFALIDWRDPLSCPL 101
Query: 57 ARQFIPQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+QF+P + L P + D +G++ SP+ + HRYPD++L +CPVYC +C R
Sbjct: 102 RKQFLPMGSQFLEDHPYYQSDSLGEDVDSPVPMLTHRYPDKVLFLPTTICPVYCSYCTRS 161
Query: 116 EMVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
++G ++ + K + Y+ ++ +V+ +GGD +L+ K+++ + + L
Sbjct: 162 RIIGGSTESIEKETYGANQKKWDDVFEYLSNHPKVEDVVVSGGDAFMLTPKQIRYIGENL 221
Query: 170 RYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEFS 220
I H++ +R ++ + PQ++ + + + + + GK V I H + E +
Sbjct: 222 LRIPHIRRIRLATKGVAIFPQKVLTDDDWFEAVQDIHKLGRSFGKQVVIHTHFSCAKEIT 281
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
+ + A+ RL AGI++ +Q+VL +G+N+ + + L R L I+PYY++ D+ G
Sbjct: 282 KWSQMAMDRLFQAGIVVRNQAVLQEGVNNHVDEMVLLTRQVGYLNIQPYYVYMHDMVPGC 341
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI--DTHNIKKVGNGSYCIT 338
HFR T++E +++ +++ +G P ++ DLPGG GK + + ++ G +
Sbjct: 342 EHFRTTLKEAEELEKAVRGTTAGFNTPTFVCDLPGGGGKRHVASYEYYDEENGISVWKAP 401
Query: 339 DHH-NIVHDYPPK 350
+ Y
Sbjct: 402 HVKPGELFTYFDP 414
>gi|188576188|ref|YP_001913117.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520640|gb|ACD58585.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 313
Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats.
Identities = 92/314 (29%), Positives = 149/314 (47%), Gaps = 2/314 (0%)
Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68
+ L + + + + + + + + +DP+ RQ +P E+
Sbjct: 2 RDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVLPLDAEMQ 61
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
+P D +GD G++ +Y R LL C V+CR+CFRR +++ +
Sbjct: 62 PVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEE--TAAR 119
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV
Sbjct: 120 DGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVL 179
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
P+R++ L+ L+ P +HANH EF A+ L + G LL+Q+VLL G+N
Sbjct: 180 PERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQAVLLGGVN 239
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
D + LA L + PYYLH D AG +HF + + + L ++SG P
Sbjct: 240 DSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATRLSGYLVPR 299
Query: 309 YILDLPGGYGKVKI 322
+ ++PG GK +
Sbjct: 300 LVREIPGDTGKRPL 313
>gi|77359438|ref|YP_339013.1| lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis TAC125]
gi|76874349|emb|CAI85570.1| putative lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis
TAC125]
Length = 308
Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats.
Identities = 88/306 (28%), Positives = 151/306 (49%), Gaps = 3/306 (0%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
+ + D + + + + + + + NDP+ Q +P+ +E +DP
Sbjct: 2 VGLSSQVHDNDIKARSLFPVRVPIPFIKKMRKGDANDPLLLQVMPRHQEFLTKSGFNKDP 61
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ + + + G++H+Y R+L+ C V CR+CFRR + L+ + AL+Y
Sbjct: 62 LLEQS-NQQPGLLHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LNKRSLLDALSY 118
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
I+ + I EVI +GGDPL+ + L L + ++ +R H+R+P+V P RI EL
Sbjct: 119 IKSDNNINEVILSGGDPLMAKDDAISWFLDELEQLPQIKRMRIHTRLPVVIPARITDELC 178
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ L + + H NH E ++ AA+ +L G++L +Q+V+LK +ND NL
Sbjct: 179 ERLARSPLKIVFVNHINHANEIDDDFKAAMQKLKQVGVVLFNQAVILKDVNDTTAAQVNL 238
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ + PYYLH D G SHF ++ E+ KI+A L E + G P + ++ G
Sbjct: 239 SEALFDADVLPYYLHLLDKVEGASHFDISEEQAIKIMAELLEALPGFLVPKLVREIGGEK 298
Query: 318 GKVKID 323
K ID
Sbjct: 299 SKTPID 304
>gi|307298212|ref|ZP_07578016.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916298|gb|EFN46681.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 364
Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats.
Identities = 103/346 (29%), Positives = 179/346 (51%), Gaps = 19/346 (5%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
MQ + LTS + + + EQI E+K++++ Y LIN ++P+DPI R
Sbjct: 1 MQ-KPTYLTSVEKIEE---LNDEQITEMKKVTDVYPFRANDYYLGLINWNDPHDPIKRII 56
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL+ D ++ ++ G+ H+Y D LL + VC +CRFCFR+ + +
Sbjct: 57 LPDFEELDE--WGDLDASQEHIYTVAPGMEHKYKDTALLLVSKVCGSFCRFCFRKRLFST 114
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ V++ D + YI++ +I V+ TGGD LILS ++L +++ LR I HV I+RF
Sbjct: 115 ENKEVVN--DVTLGVEYIRKHKEITNVLLTGGDSLILSTEKLGDIVRQLREIDHVGIIRF 172
Query: 181 HSRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGI 235
S++ +P RI +P+L +K+ P +YI H NHP E ++EAI ++ L +AG
Sbjct: 173 GSKMVAFNPYRIINDPDLPDMVKKYSTPKKRIYIMAHFNHPRELTDEAIRGLNILRDAGA 232
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
++ +Q+ +++G+ND E++ L R + I PYY+ G + + E G +I
Sbjct: 233 VICNQTPMIRGVNDSVEVMTELFRKLSFIGIPPYYVFQCRPTKGNHTYAVPAENGYEIFK 292
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ +SGL + + + GK++ + + H
Sbjct: 293 KSIDSVSGLAKRARFV-MSHATGKIE-----YVGLDEKKIYMKYHR 332
>gi|50085317|ref|YP_046827.1| putative aminomutase [Acinetobacter sp. ADP1]
gi|49531293|emb|CAG69005.1| conserved hypothetical protein; putative aminomutase [Acinetobacter
sp. ADP1]
Length = 338
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 159/316 (50%), Gaps = 3/316 (0%)
Query: 8 LTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +L + I EQ+ S+ + + + N + +P DP+ Q +P E
Sbjct: 19 IIDPFELLDQLDISSEQLLSGAILASDTFKLRVPRAFVNKMQKADPFDPLLLQVLPHHLE 78
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L PE DP+G+ + L G++H+Y R LL L C V+CR+CFRR + +
Sbjct: 79 LEDHPEFVTDPLGEEEANQLPGVLHKYQSRFLLTLTGACAVHCRYCFRRHFPYQEN--LP 136
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ D YIQ+ I EVI +GGDPL L++ +L+ ++ L + V+ILR HSRVPI
Sbjct: 137 KNNDWPQIQNYIQQHPLINEVILSGGDPLTLTNHKLKIWIERLESLPQVKILRIHSRVPI 196
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI+ EL+ L+ + + + +H+NH E + + +L+ + + +Q+VLLKG
Sbjct: 197 VIPNRIDEELLSLLENSRLRIIMVVHSNHAAELDDFTCNQLHKLSLRNVTVFNQAVLLKG 256
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L L + + R+ PYYLH D G HF L + + + + G
Sbjct: 257 VNDSAQTLIELSQRLFDARVMPYYLHVLDKVKGAQHFDLESSKVDSLYKEVLAGLPGYLV 316
Query: 307 PFYILDLPGGYGKVKI 322
P + ++ G K +
Sbjct: 317 PKLVREIAGEKNKTPL 332
>gi|258545639|ref|ZP_05705873.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826]
gi|258519106|gb|EEV87965.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826]
Length = 326
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 133/314 (42%), Positives = 199/314 (63%), Gaps = 5/314 (1%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
+ ++L + + + Y A++ ++ ++ P+DPIA QFIP EL I
Sbjct: 2 TPEELARRANLTPATLHRL---LAEYQYAMSDEMSAAMH-DAPDDPIAAQFIPDARELTI 57
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
E DPIGD HSPL +VHRYP+R+L K+ +C VYCRFCFR+E +G +G L
Sbjct: 58 AASELADPIGDAPHSPLPSLVHRYPNRVLWKISPICAVYCRFCFRKEHIGR-RGQALRQS 116
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ A AY+ QI E+I +GGDPL LS+K+L++ L +R + H++ LR HSR+P+V P
Sbjct: 117 EIAAVSAYLAANPQIEEIILSGGDPLTLSNKKLRQNLAIIRDLPHIRRLRIHSRIPVVQP 176
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
RI+ L+ L E + ++ +H NH E + A AA+ RL +G++L SQ+VLLKG+N
Sbjct: 177 ARIDHALLDLLGEQPQSTHLVVHTNHSAELTPNARAALHRLRTSGVMLYSQTVLLKGVNA 236
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D LANLM ++ +KPYYLHH DLA GT H+R+++ EG+ IVA+L+ ++SG+ P Y
Sbjct: 237 DAATLANLMNDLLDCGVKPYYLHHLDLARGTGHYRVSLNEGRAIVAALRRRLSGIAMPTY 296
Query: 310 ILDLPGGYGKVKID 323
I+++PGG GK+ +
Sbjct: 297 IVEIPGGDGKIPVG 310
>gi|90407173|ref|ZP_01215361.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3]
gi|90311749|gb|EAS39846.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3]
Length = 338
Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats.
Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 3/318 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ + Q L + E + ++ + + + + NDP+ RQ +P +E
Sbjct: 23 AIKNPQQLLELLDLNPEMFALSEPARKNFPMLVPLPFIKKMKKGDINDPLLRQVLPITDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ ++++S ++G++H+Y RILL L C V CR+CFRR L
Sbjct: 83 DKQVEGYSIDPLLEHDNS-IQGVLHKYKSRILLVLKSGCAVNCRYCFRRHFPYQDN--NL 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ K + Y++ + EVI +GGDPL+ L V+ L+ +K ++ LR H+R+P+
Sbjct: 140 NKKQLAEVILYLKAHPDVNEVILSGGDPLMSKDDFLDYVINELQQLKQLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQR+ L + LK V +H NH +E + A+ +L +AGI LL+QSVLL+G
Sbjct: 200 VIPQRVTDRLCEILKATRLQVVFVVHINHAHEIDKAFKIAMLKLHHAGIQLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ E L L + I PYYL D G HF L ++ + ++ + + G
Sbjct: 260 VNDNAEALVALSEALFDAHILPYYLFLLDKVQGAQHFDLEEQKAKALLLEISAALPGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K I
Sbjct: 320 PRLSREIAGEKSKTLITP 337
>gi|291280226|ref|YP_003497061.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1]
gi|290754928|dbj|BAI81305.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1]
Length = 519
Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 98/355 (27%), Positives = 175/355 (49%), Gaps = 12/355 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+ + + L + ++ I ++ ++ HY + LTP A+LI P N NDP+ Q +
Sbjct: 155 QLK-FAIEDVETLSKIIDLPEKAITDVLRVTKHYRMRLTPYYASLIMPGNINDPVLLQSV 213
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ++ + E P +HSP + I YP + +K ++C +YC C R +G
Sbjct: 214 PTGEMVDNVGVE--IPPVAADHSPARLIDQFYPRVVTIKSTNMCAMYCTHCLRIAHIGK- 270
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K + + K AL YI+ I +V+ TGGD +L + ++ +L+ L I HV++ R
Sbjct: 271 KDRIYNKKAYLEALEYIKNNKNIRDVLVTGGDAFVLPNSLIRWILEELDKIDHVKMKRLG 330
Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R+P+ PQR++ EL+ L+E+ KP+ + N E + + +++ +L+
Sbjct: 331 TRIPVTTPQRVDQELLDILEESNDKKPLRVVTQINTAQEITPISKEVFKQISKRVSAVLN 390
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLK 298
Q+VLL+GIND + L T E ++PYY+ + +H R+ ++ GQ I+ +
Sbjct: 391 QAVLLRGINDSKVKMWKLCETIQEAYVRPYYVFNCSYRNPQFAHMRVPVQVGQDIIEGMY 450
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK-VGNGSYCITD-HHNIVHDYPPKS 351
ISG P Y + GK+ + N+ + +G+ + + YP
Sbjct: 451 GNISGDAIPRY---IATAGGKIPLHRTNVVEFAEDGNIILRKPWSGEIVKYPDAD 502
>gi|254482976|ref|ZP_05096212.1| KamA family protein [marine gamma proteobacterium HTCC2148]
gi|214036848|gb|EEB77519.1| KamA family protein [marine gamma proteobacterium HTCC2148]
Length = 346
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 96/325 (29%), Positives = 165/325 (50%), Gaps = 3/325 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ S + L + + + + + + + + + + +P+DP+ RQ + EL
Sbjct: 21 VRSGRQLLSQLGLDAQAVGYSELAGEDFPLKVPQSFISRMTHGDPDDPLLRQVLSVSAEL 80
Query: 68 NILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+P +DP+G+ S G++ +Y R LL L C + CR+CFRR ++
Sbjct: 81 LQVPGFGDDPVGETGDSITHPGVIQKYHGRALLILSGGCAINCRYCFRRHFPYNENRN-- 138
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S ++ A+ +I + I EVI +GGDPL++S ++L+ ++ L I H+Q LR HSR+PI
Sbjct: 139 SREEWLHAVRHIADDPSISEVILSGGDPLLVSDRQLKSLVGQLAAIPHLQRLRVHSRLPI 198
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ L+ L + +H+NH E + E A+ +L++ I LL+Q+VLL G
Sbjct: 199 VLPSRVTAGLVNALTGTRLQSVLVVHSNHGNEINTEVKNALQKLSSGKITLLNQAVLLAG 258
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND + LA+L + PYYLH D G +HF +T G +++ L+ ++ G
Sbjct: 259 INDTEDELADLSEQLFTAGVLPYYLHLLDRVRGAAHFEVTARRGLELITQLENRLPGYLV 318
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG 331
P + + G KV++ V
Sbjct: 319 PRLVREDAGELAKVRVTAAPAVSVN 343
>gi|116207106|ref|XP_001229362.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51]
gi|88183443|gb|EAQ90911.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51]
Length = 498
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 114/349 (32%), Positives = 175/349 (50%), Gaps = 28/349 (8%)
Query: 31 ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKG 88
+ ++ +TP I + IN HNP +DPIARQF+P K + P+ D + + SP+KG
Sbjct: 143 TAATMAVRMTPYILSRINWHNPRHDPIARQFLPLKSRMIPDHPKLTLDSLHEEADSPVKG 202
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKS 142
+VHRYPD+ L VCP YC FC R VG+ TV + + ALAYI +
Sbjct: 203 LVHRYPDKALFLPTSVCPTYCTFCTRSYAVGADTATVSKASLKPGRRRWDEALAYIASQP 262
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NP 194
Q+ +++ +GGD L ++L+++ + L I H++ RF S+ V P R+
Sbjct: 263 QLQDIVVSGGDAYYLQAEQLEQLGERLIAIPHIRRFRFASKGLAVAPGRVLDRSGDGWTD 322
Query: 195 ELIQC---LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
L++ + AGK V H NHP E S AA RL G+++ +QSVLL+G+NDD
Sbjct: 323 ALVRVSDRARRAGKAVAWHTHFNHPSEISWVTEAAAQRLFEEGVMVRNQSVLLRGVNDDV 382
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
E + L+R I PYY++ D+ H R + + A L+ I+G P +++
Sbjct: 383 ETMGALIRGLANNNIFPYYVYQCDMVKSVEHLRTPLRTILDLEAKLRGSIAGFMMPSFVV 442
Query: 312 DLPGGYGKVKIDTHN--------IKKVGNGSYCITDHHNIVHDYPPKSS 352
DLPGG GK ++ I + + D N V++Y +
Sbjct: 443 DLPGGGGK-RLACSYESYDRATGISRYTAPAVTGRDKENKVYEYYDPVN 490
>gi|307353177|ref|YP_003894228.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
gi|307156410|gb|ADN35790.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
Length = 358
Score = 305 bits (782), Expect = 6e-81, Method: Composition-based stats.
Identities = 93/343 (27%), Positives = 161/343 (46%), Gaps = 20/343 (5%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ LTS ++ + ++ + N++ +LIN +P DPI + IP
Sbjct: 4 NACLTSIAEVNRQF---DAGLSGLEAVENNFPFLANQYYLSLINWDDPEDPIKKIIIPNS 60
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E+ DP + ++ G+ H+Y L+ + C +CRFCFR+ + +
Sbjct: 61 AEMVK--WGSLDPSMEARNTKSPGLQHKYQATALMLISDNCGGFCRFCFRKRLFIKPEDE 118
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ +D + YI+ +I V+ +GGD L++ RL K++ L IKHV+ +R +++
Sbjct: 119 KI--RDLSTDIDYIRSHPEISNVLLSGGDALMIPTSRLSKIVSALFSIKHVKSVRIGTKM 176
Query: 185 PIVDPQRIN--PELIQCLK---EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
P +P RI L ++ +GK +Y NHP E ++EA A+ L +G L +
Sbjct: 177 PAYNPFRITGDESLQAMIQENSRSGKMLYFMTQFNHPRELTKEAKEAMDLLRLSGASLAN 236
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+ +L G+N+DPE L+ L E PYYL AAG HF + +E +I K
Sbjct: 237 QTPILNGVNNDPETLSGLCSNLAEAGNVPYYLFQCRPAAGNRHFTVPVENTYEIYEKAKR 296
Query: 300 KISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+SGL + Y+ + GK+++ + +G + H
Sbjct: 297 SLSGLAKRARYV--MSHATGKIEV-----IGMDSGKVYMKYHQ 332
>gi|256823217|ref|YP_003147180.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM
16069]
gi|256796756|gb|ACV27412.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM
16069]
Length = 349
Score = 305 bits (782), Expect = 7e-81, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 154/322 (47%), Gaps = 3/322 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L + ++S +L + + + + + + + + NPNDP+ RQ +
Sbjct: 22 KLLSQAISSPFELLSRLNLTTDDLPYTVLAEHQFMQKVPAPFVECMEKGNPNDPLLRQVL 81
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
+E + DP+ + N S + G++H+Y R+L+ L C + CR+CFRRE +
Sbjct: 82 AVSDENQEVAGFVPDPLQEQN-SEVPGLLHKYRSRVLVMLSTACAINCRYCFRREFPYQE 140
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ Y+ +I EVI +GGDPL ++ L+ ++ L I + LR H
Sbjct: 141 HQA--GRNGWQPIFDYLTAHPEINEVILSGGDPLAVNDSYLKDFIQQLERIPSIIRLRIH 198
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+P+V PQR+ LI L + + +H NHP E E A+ RL GI LL+QS
Sbjct: 199 TRLPLVIPQRVTQGLIDALLQTRLQTVVVLHINHPNEMGELFAQAVRRLHQNGIHLLNQS 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+N++ LA L I PYYLH D G HF + + KI+ L ++
Sbjct: 259 VLLDGVNNNSSTLAELSEKLFAHHILPYYLHQLDKVRGAHHFAVEEAQAIKIMQELNTRL 318
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
+G P + + G K ID
Sbjct: 319 AGFLVPKLVREEAGKTSKTPID 340
>gi|268323643|emb|CBH37231.1| conserved hypothetical protein [uncultured archaeon]
Length = 366
Score = 305 bits (781), Expect = 9e-81, Method: Composition-based stats.
Identities = 101/344 (29%), Positives = 178/344 (51%), Gaps = 16/344 (4%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++++ L + +++ ++EI + + + +T +L++ ++P+DPI + +P +EE
Sbjct: 10 SISTIAQLGEYMELDPKKVAILQEIIDRHPMRITRYYLSLLDENDPDDPIRKMAVPSEEE 69
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
LN D G+ ++ + G+ H+Y L+ + C +YCR+CFR+ +VG ++
Sbjct: 70 LN--LVGSYDTSGERENTIMPGLQHKYAQTALILATNKCAMYCRYCFRKRLVGLPTKEIM 127
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
A YI+E +I V+ +GGDP ILS L + L+ L I H+ +RF +RVP+
Sbjct: 128 HR--FNGAAKYIEEHEEINNVLISGGDPFILSTVVLSEFLERLSDILHLDFIRFGTRVPV 185
Query: 187 VDPQRINPELIQCL-----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
P RI + + +Y+ NHP E + +A A+SRL AG+I+ +Q+
Sbjct: 186 TFPDRILKDDKLLTLLGNNSHENRRIYVVTQFNHPREITAKATGAVSRLIRAGVIVDNQT 245
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEK 300
VLLKG+NDDPE LA L V + + PYYL S+F++ + +G +IV + KE+
Sbjct: 246 VLLKGVNDDPETLAELQNKLVSIGVIPYYLFQCRPVKRVKSYFQVPLYKGYEIVEAAKER 305
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
++G + + + GK++I V + H V
Sbjct: 306 LNGHSK-RFKYTMSHRTGKIEI-----VGVMDDYIYFKYHQAHV 343
>gi|255318144|ref|ZP_05359387.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter
radioresistens SK82]
gi|262378563|ref|ZP_06071720.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164]
gi|255304796|gb|EET83970.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter
radioresistens SK82]
gi|262299848|gb|EEY87760.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164]
Length = 338
Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 102/316 (32%), Positives = 161/316 (50%), Gaps = 3/316 (0%)
Query: 8 LTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L +A + EQ+ S + + + + +P DP+ Q +P E
Sbjct: 19 ITDPLELLHALQLSPEQLLSGAVLASEKFKLRVPRAFVAKMCIGDPLDPLLLQVLPHHLE 78
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P DP+G+ + L G++H+Y R LL L C V+CR+CFRR + +
Sbjct: 79 LEDFPGFVTDPLGEEAANLLPGVLHKYKTRFLLTLTGACAVHCRYCFRRHFPYQEN--LP 136
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
++D A YI + ++ E+I +GGDPL LS+++L L+ L I + LR HSRVPI
Sbjct: 137 KNEDWPAIKNYILSQPEVHEIILSGGDPLTLSNRKLGLWLERLESIPQIDTLRIHSRVPI 196
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI+ ELI L+ + + + +H+NH E + + + LA + +L+Q+VLLKG
Sbjct: 197 VIPDRIDHELISLLENSRLRIILVVHSNHASELDDFTCSKLHELARRQVTVLNQAVLLKG 256
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND E+L NL E R+ PYYLH D G HF L + ++ + + G
Sbjct: 257 INDSAEVLINLSYRLFEARVMPYYLHVLDKVKGAHHFDLPSSKIDEVYKEVLASLPGYLV 316
Query: 307 PFYILDLPGGYGKVKI 322
P + ++ G K +
Sbjct: 317 PKLVREIAGEKNKTPL 332
>gi|148652299|ref|YP_001279392.1| lysine 2,3-aminomutase YodO family protein [Psychrobacter sp.
PRwf-1]
gi|148571383|gb|ABQ93442.1| L-lysine 2,3-aminomutase [Psychrobacter sp. PRwf-1]
Length = 372
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 86/316 (27%), Positives = 153/316 (48%), Gaps = 4/316 (1%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T L + I + + + + + + + NDP+ Q +P K+E
Sbjct: 51 ITDIDQLLAILELS--HIKDELYVPQGFGLRVPKAFVAKMKKGDANDPLLLQVLPNKQEQ 108
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ DP+ +N H+P+KG++H+Y R+L+ + C ++CR+CFR+ + +
Sbjct: 109 TQVTGYVSDPLAENAHNPIKGLLHKYRSRVLVTVTGACAIHCRYCFRQHF--DYQANLPK 166
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
S YI++ +I EVI +GGDPL ++++RL L+ L + + +R H+R+ IV
Sbjct: 167 SDQLRLIQDYIRQHPEINEVILSGGDPLSVTNRRLFLWLQALEDLPQINTIRLHTRLSIV 226
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P R++ EL+ L+ + + + +H NH E + GI LL+Q+VLL G+
Sbjct: 227 IPDRLDNELLDRLEHSRCRIVMVVHTNHANEIDNHTAKLLQHARQKGITLLNQTVLLAGV 286
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + L E + PYYLH D AG +HF + ++ + + + G P
Sbjct: 287 NDGLKQQVALSERLFEAGVLPYYLHLLDKVAGAAHFDIAQKQAIDLYWQMLAHLPGYLVP 346
Query: 308 FYILDLPGGYGKVKID 323
+ +LP K +D
Sbjct: 347 KLVQELPHKPFKTPVD 362
>gi|78486083|ref|YP_392008.1| hypothetical protein Tcr_1742 [Thiomicrospira crunogena XCL-2]
gi|78364369|gb|ABB42334.1| L-lysine 2,3-aminomutase [Thiomicrospira crunogena XCL-2]
Length = 323
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 95/318 (29%), Positives = 157/318 (49%), Gaps = 9/318 (2%)
Query: 8 LTSAQDLYNANLIKKEQID-EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ S + L + + + + + + + AN I +PNDP+ +Q +P E
Sbjct: 2 IQSVEQLCDFVDLSADDLPIDFDSA---FPFKVPKHFANQIEKGSPNDPLLKQILPGLAE 58
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+GD +P ++H+Y R LL C ++CR+CFRR Q
Sbjct: 59 QELYPGFSPDPVGDLAANPQPSLIHKYHGRALLIASPRCDIHCRYCFRRHFPYEQ----A 114
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ +AAL I + I EVI +GGDP+ LS L +++ + I HV LR HSR PI
Sbjct: 115 KKQHWQAALENIAQDHSITEVILSGGDPMTLSENTLIELVHEIEAIPHVSTLRMHSRTPI 174
Query: 187 VDPQRIN-PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
V PQ+ + P L++ L ++ + +H NH E + E+ + + + + LL+Q+VLLK
Sbjct: 175 VAPQKAHRPTLLKALSKSRLQTVLVVHCNHANELTPESADLMQQFRQSNVFLLNQTVLLK 234
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND + L+ L + I PYY H D +G+ HF + + I L++ + G
Sbjct: 235 GINDSADTLSALSKKLFSQGILPYYCHLLDKVSGSGHFDVQKHQAWAIFDQLRQALPGYL 294
Query: 306 QPFYILDLPGGYGKVKID 323
P ++ ++ G K +
Sbjct: 295 VPRFVEEIAGEPYKTLLT 312
>gi|149194496|ref|ZP_01871592.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus
TB-2]
gi|149135240|gb|EDM23720.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus
TB-2]
Length = 414
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 92/377 (24%), Positives = 163/377 (43%), Gaps = 40/377 (10%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQ 59
M+ + ++ S + L + KE I+ IK +S + + IA+L++ N +DPI R
Sbjct: 1 MRYKSYSVKSFEKLPFVRKMDKEDIENIKVVSKIFPFKINEYIASLVDWDNYKDDPIFRL 60
Query: 60 FIPQKEELN------------------------ILPEEREDPIGDNNHSPLKGIVHRYPD 95
P K+ L+ P + + I + N L+G H+Y +
Sbjct: 61 IFPHKDMLDSKDFEKLKNSNDEKLIYDIRMKLNPHPAGQMENIPEINGKRLEGSQHKYKE 120
Query: 96 RILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
IL C YC FCFR +SK+ E + YI+ I +V+FTGGD
Sbjct: 121 TILFFPKQGQTCHAYCSFCFRWPQFIGINELKFASKEVEILIEYIKANPTITDVLFTGGD 180
Query: 154 PLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI-NPE-------LIQCLKEA 203
PL++S K L+ +K L I H++ +R ++ P R E L + + ++
Sbjct: 181 PLVMSTKLLKAYIKPLIEAKIPHLKNIRIGTKALSFWPYRFLTDEDANELLDLFKYIVDS 240
Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
G + H NH E ++E A+ ++ + G I+ +QS LL+ IND ++ + + V
Sbjct: 241 GYHLAFMAHFNHYKELQTDEVKEAVKKILSTGAIIRTQSPLLRHINDSSKVWEIMWKEQV 300
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
L + PYY+ +F L + + +I +SGL + + GK+ +
Sbjct: 301 ALNMIPYYMFVARDTGAKRYFELPLSKAWEIYKGAISNVSGLARTVRGPSMSAKPGKIAV 360
Query: 323 DTHNIKKVGNGSYCITD 339
+ ++ N + +
Sbjct: 361 VG--VSEINNEKVFVLN 375
>gi|332160002|ref|YP_004296579.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664232|gb|ADZ40876.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 281
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 94/277 (33%), Positives = 151/277 (54%), Gaps = 3/277 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P DP+ + S + G++H+Y +R LL + C
Sbjct: 1 MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPLDEQ-RSVVPGLLHKYRNRALLLVKGGCA 59
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+ CR+CFRR + + AL Y+ + ++ E+IF+GGDPL+ L +L
Sbjct: 60 INCRYCFRRHFPYQDNQG--NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLL 117
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ I H++ LR H+R+P+V P RI EL Q L ++ V + H NH E +
Sbjct: 118 DEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDS 177
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+++L AG+ LL+QSVLL+G+NDD E+LA L T + I PYY+H D G +HF +
Sbjct: 178 MAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVD 237
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 238 DDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 274
>gi|71066234|ref|YP_264961.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4]
gi|71039219|gb|AAZ19527.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4]
Length = 335
Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 163/317 (51%), Gaps = 4/317 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+TS +L ++ + + + H+ + + + + +DP+ RQ +P ++E
Sbjct: 18 AITSIDELLEILQLQSLRSEVY--VPEHFELRVPRAFVAKMTVGDRDDPLLRQVLPHQKE 75
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ +N H+P+KG++H+Y R+LL L C ++CR+CFR+ S
Sbjct: 76 RITVAGYVADPLAENAHNPVKGVLHKYQSRLLLTLTGACAIHCRYCFRQHFDYSANMPTA 135
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S+K + YI +I E+I +GGDPL ++++RL L TL I+ + +R H+R+P+
Sbjct: 136 SAKQ--DIIDYISAHPEINEIILSGGDPLNVTNRRLFAWLDTLEAIEQLTTIRIHTRLPL 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R++ L++ L ++ + + IH NH E + R AGI LL+Q+VLLKG
Sbjct: 194 VIPARLDDALLERLAQSCCQIVMVIHGNHANEIDTLTAEYLRRARAAGITLLNQAVLLKG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND L + + PYYLH D AG +HF ++ SL K+ G
Sbjct: 254 INDSVSAQMALSQRLFAAGVLPYYLHVLDKVAGAAHFDRDERSAIELYWSLLAKLPGYLV 313
Query: 307 PFYILDLPGGYGKVKID 323
P + +LP KV I+
Sbjct: 314 PKLVRELPNKPFKVPIN 330
>gi|254491873|ref|ZP_05105052.1| KamA family protein [Methylophaga thiooxidans DMS010]
gi|224463351|gb|EEF79621.1| KamA family protein [Methylophaga thiooxydans DMS010]
Length = 335
Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 152/316 (48%), Gaps = 2/316 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +A DL + K+ + + + + + + NDP+ RQ P +E
Sbjct: 21 AINNADDLLEKLGLSGHLQAIDKDKIRQFPLRVPQSYVDKMRYGDANDPLLRQVFPLIDE 80
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
DP+GD+ GI+ +Y R LL C ++CR+CFRR S +
Sbjct: 81 GYPAEGYLTDPVGDHLAVTSPGILQKYQGRALLLTTGACAIHCRYCFRRHFPYSD--SNP 138
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + ++ + I EVI +GGDPL L +L K++ L I H++ LR H+R+PI
Sbjct: 139 LSSQWQQSIEQLASDETISEVILSGGDPLSLHDDKLAKLVADLAEIPHLKRLRIHTRLPI 198
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RIN L+ ++ V + IHANH E A A+ L AG LL+Q+VLL+G
Sbjct: 199 VLPERINDSLLNWIQATRFKVVVVIHANHANEIDAHAEQALISLKQAGCQLLNQTVLLRG 258
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND E L+ L ++ + PYYLH D AG HF + K+V L++ + G
Sbjct: 259 INDSVESLSALSERLNDVDVMPYYLHLLDKVAGAQHFDVNQVRAVKLVDDLRKVLPGYLV 318
Query: 307 PFYILDLPGGYGKVKI 322
P + + G K I
Sbjct: 319 PRLVREQQGEASKTVI 334
>gi|304311512|ref|YP_003811110.1| hypothetical protein HDN1F_18820 [gamma proteobacterium HdN1]
gi|301797245|emb|CBL45465.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 336
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 89/327 (27%), Positives = 166/327 (50%), Gaps = 5/327 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + ++S +L+ + + ++ + + + + + I +DP+ RQ +
Sbjct: 9 QQLSQLVSSVDELWRLLDLPQSLLESASAAARAFPLRVPQAFVDKIQKGKLDDPLLRQIL 68
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
PQ EL P+ DP+ + + +P +G++H+Y R+L+ C + CR+CFRR
Sbjct: 69 PQGLELTPPPDFVTDPLAELHANPHRGLLHKYQSRVLIIAGSACAINCRYCFRRHFPYED 128
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
LS + + +++ ++ EVIF+GGDPLI S+ RLQ+ + L + ++ +RFH
Sbjct: 129 NQ--LSQAQFDELIQHLETHPEVNEVIFSGGDPLINSNARLQRWVDALLLLPQLKRIRFH 186
Query: 182 SRVPIVDPQRINPELIQCLK---EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+R P+V P RI+ L+ + ++G+ + +H+NHP E A+ +L +A + L
Sbjct: 187 TRTPVVVPARIDEGLLALFRSIAQSGRNAILVVHSNHPSELDHHFDTAMRKLRDAQVTLF 246
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL+G+ND + A L + + PYYLH D AG F + E ++ +
Sbjct: 247 NQAVLLRGVNDHVDAQAALSERLFDAGVLPYYLHLLDPVAGAHDFSIHDTEAFELYRQMA 306
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTH 325
++ G P ++PG K + +
Sbjct: 307 ARLPGFLLPRLAREVPGAPAKQILAPN 333
>gi|319786811|ref|YP_004146286.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317465323|gb|ADV27055.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas
suwonensis 11-1]
Length = 338
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 158/321 (49%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L + + ++L + + + +++ + + + +DP+ RQ +
Sbjct: 20 RLWREAVRDPRELLALLGLDEAAARISGAAAGQFAMRVPRGFIARMRHGDLHDPLLRQVL 79
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E I+P D +GD G++ +Y R LL C + CR+CFRR ++
Sbjct: 80 PVVDEERIVPGFGLDAVGDGLAKKADGVIQKYHGRALLVATGSCAINCRYCFRRHFPYAE 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EVI +GGDPL L+ +L ++ L I H++ LR H
Sbjct: 140 E--TAARDGWAGAVAAIAADPGIDEVILSGGDPLSLATSKLAELTAQLATIPHIRRLRIH 197
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+RI+ ++ + PV IHANH EF A+ RL AG LL+Q+
Sbjct: 198 SRLPVVLPERIDDAFVEWMSALPWPVAFVIHANHANEFDASVDQALGRLRQAGAQLLNQA 257
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA+L + PYYLH D G +HF + E +++ L ++
Sbjct: 258 VLLRGVNDSVDALADLSERSYAAGVLPYYLHQLDRIQGAAHFEVGDERARELHRQLAARL 317
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++ G GK +
Sbjct: 318 SGYLVPKLVREVQGDPGKRPL 338
>gi|169632907|ref|YP_001706643.1| hypothetical protein ABSDF1142 [Acinetobacter baumannii SDF]
gi|169151699|emb|CAP00492.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 338
Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 21 KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD 80
+ + S + + + +N +P DP+ Q +P EL PE DP+G+
Sbjct: 33 TDQLLSGAILASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGE 92
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ L G++H+Y R LL L C V+CR+CFRR + + ++D YI+
Sbjct: 93 EAANQLPGVLHKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIES 150
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I EVI +GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI L
Sbjct: 151 NPDINEVILSGGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLL 210
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
K + + + +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L
Sbjct: 211 KNSRLRIILVVHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYR 270
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E RI PYYLH D G HF L E I + + G P + ++ G K
Sbjct: 271 LFEARIMPYYLHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKT 330
Query: 321 KI 322
+
Sbjct: 331 PL 332
>gi|169795200|ref|YP_001712993.1| hypothetical protein ABAYE1057 [Acinetobacter baumannii AYE]
gi|184158947|ref|YP_001847286.1| lysine 2,3-aminomutase [Acinetobacter baumannii ACICU]
gi|213158137|ref|YP_002320188.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057]
gi|215482748|ref|YP_002324946.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii
AB307-0294]
gi|301346998|ref|ZP_07227739.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB056]
gi|301511118|ref|ZP_07236355.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB058]
gi|301596429|ref|ZP_07241437.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB059]
gi|332857081|ref|ZP_08436387.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150]
gi|332870019|ref|ZP_08438995.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113]
gi|332874730|ref|ZP_08442600.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059]
gi|169148127|emb|CAM85990.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|183210541|gb|ACC57939.1| Lysine 2,3-aminomutase [Acinetobacter baumannii ACICU]
gi|193077935|gb|ABO12838.2| putative aminomutase [Acinetobacter baumannii ATCC 17978]
gi|213057297|gb|ACJ42199.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057]
gi|213987501|gb|ACJ57800.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii
AB307-0294]
gi|322508931|gb|ADX04385.1| lysine 2,3-aminomutase [Acinetobacter baumannii 1656-2]
gi|323518917|gb|ADX93298.1| lysine 2,3-aminomutase [Acinetobacter baumannii TCDC-AB0715]
gi|332726896|gb|EGJ58410.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150]
gi|332732519|gb|EGJ63770.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113]
gi|332736991|gb|EGJ67948.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059]
Length = 338
Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 21 KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD 80
+ + S + + + +N +P DP+ Q +P EL PE DP+G+
Sbjct: 33 TDQLLSGAILASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGE 92
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ L G++H+Y R LL L C V+CR+CFRR + + ++D YI+
Sbjct: 93 EAANQLPGVLHKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIES 150
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I EVI +GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI L
Sbjct: 151 NPDINEVILSGGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLL 210
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
K + + + +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L
Sbjct: 211 KNSRLRIILVVHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYR 270
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E R+ PYYLH D G HF L E I + + G P + ++ G K
Sbjct: 271 LFEARVMPYYLHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKT 330
Query: 321 KI 322
+
Sbjct: 331 PL 332
>gi|260556680|ref|ZP_05828898.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606]
gi|260409939|gb|EEX03239.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606]
Length = 338
Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 21 KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD 80
+ + S + + + +N +P DP+ Q +P EL PE DP+G+
Sbjct: 33 TDQLLSGAILASEKFKLRVPRAFVGKMNVKDPLDPLLLQVLPHHLELEEHPEFVTDPLGE 92
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ L G++H+Y R LL L C V+CR+CFRR + + ++D YI+
Sbjct: 93 EAANQLPGVLHKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIES 150
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I EVI +GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI L
Sbjct: 151 NPDINEVILSGGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLL 210
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
K + + + +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L
Sbjct: 211 KNSRLRIILVVHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYR 270
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E R+ PYYLH D G HF L E I + + G P + ++ G K
Sbjct: 271 LFEARVMPYYLHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKT 330
Query: 321 KI 322
+
Sbjct: 331 PL 332
>gi|88704864|ref|ZP_01102577.1| conserved hypothetical protein [Congregibacter litoralis KT71]
gi|88701185|gb|EAQ98291.1| conserved hypothetical protein [Congregibacter litoralis KT71]
Length = 345
Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats.
Identities = 101/329 (30%), Positives = 161/329 (48%), Gaps = 4/329 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+ + + + +L A + E++ + + + + + N DP+ RQ +
Sbjct: 19 QLQ-QAIRTPSELSAALGLTLEELPYSAAADDAFPLLVPAAFVARMEKGNAWDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+E +DP+G+ + ++ G++ +Y R LL C V CR+CFRR
Sbjct: 78 AVPQENLPAEGFSDDPVGETSLYADTPGVIQKYQGRALLVATGQCAVNCRYCFRRSYPYG 137
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
SSK+ AA+ + I EVI +GGDPL+L L + + LR LR
Sbjct: 138 DNSQ--SSKERLAAIDTLLADPSIGEVILSGGDPLLLPDASLAAIARRLRGNTRGITLRI 195
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+R+PIV P R+ LI L + V + +H+NHP E + A+ RL + G+ +L+Q
Sbjct: 196 HTRLPIVIPDRVTASLIDALMPREQRVVVVVHSNHPREIDHDTARALERLRDGGVTVLNQ 255
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGINDD ++LA L PYYLH D AG++HF ++ ++I+ L K
Sbjct: 256 SVLLKGINDDADVLAELSDQLFAAGAMPYYLHMLDKVAGSAHFEVSELRARQILGQLASK 315
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
G P +++PG K +I +
Sbjct: 316 RPGYLVPKLAVEVPGADSKREIAPDYVGG 344
>gi|153875802|ref|ZP_02003435.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
gi|152067734|gb|EDN66565.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
Length = 334
Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats.
Identities = 97/315 (30%), Positives = 159/315 (50%), Gaps = 5/315 (1%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ + + L I + Q+ + H+ + + + +PNDP+ RQ +P
Sbjct: 21 RQAIHNPLHLLELLEIAESQLAHRLMVQPHFKLQVPKGYVARMQKGDPNDPLLRQVLPLI 80
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+E + DP+GD+ + G++ +Y RIL C ++CR+CFR+ S+
Sbjct: 81 DEQKQVLGFGVDPVGDSAAEKVPGLLQKYQGRILWLTTTACAIHCRYCFRQHYPTSKTKL 140
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ L I+ + I EVI +GGDPL+L L ++ K+L I VQ LR H+R+
Sbjct: 141 Y-----YQRVLDTIRADTSITEVILSGGDPLMLLDSDLAEMAKSLADIPQVQRLRLHTRL 195
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
PIV P R+N EL+ L E + + +HANH E E +A+ +L AGI +L+QSVLL
Sbjct: 196 PIVLPTRVNNELLTWLTETRLQLIVVVHANHANEIDNEVKSALQKLVTAGITVLNQSVLL 255
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+GIND+ L L + R+ PYYLH D G +HF + + +++ ++ + G
Sbjct: 256 RGINDNATALMALSEILFDSRVLPYYLHVLDRVQGAAHFEVPEQTALELLEKMRVALPGY 315
Query: 305 CQPFYILDLPGGYGK 319
P + ++ G K
Sbjct: 316 LVPKLVREVTGMAYK 330
>gi|163783207|ref|ZP_02178201.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881541|gb|EDP75051.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1]
Length = 375
Score = 302 bits (773), Expect = 7e-80, Method: Composition-based stats.
Identities = 108/348 (31%), Positives = 179/348 (51%), Gaps = 21/348 (6%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
MQ + K + + +K + +E+K++++ ++ +LIN +P DPI R
Sbjct: 1 MQKKVKYIIKLDLIPQ---LKDREKEELKQVTDKFAFRTNDYYNSLINWDDPEDPIRRIV 57
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EEL++ + ++ + + G+ H+YPD LL + VC +YCRFCFR+ + +
Sbjct: 58 IPTTEELDV--WGKLHASNESKYMKVHGLEHKYPDTALLLVTDVCGIYCRFCFRKRLFMN 115
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
V +D L YI+ +I V+ TGGDPL+L+ +L+K LK L I HV+I+R
Sbjct: 116 DNDEVA--RDVSEGLEYIRNHPEINNVLLTGGDPLVLATFKLEKTLKALAEIPHVRIVRI 173
Query: 181 HSRVPIVDPQRI--NPELIQCLKEA----GKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
S++ V+P R+ +P L++ + GK +Y+ H NHP E ++EA A+ + G
Sbjct: 174 GSKMLAVNPFRVIDDPSLLELFEWFNTETGKKLYLMNHFNHPRELTKEARKAVELVQKTG 233
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
L +Q+ +LKGIND+ E L L+ + + PYY+ AG + IEE +V
Sbjct: 234 TTLTNQTPILKGINDNEETLRELLEELSFMGVPPYYVFQCRPTAGNKTYSTKIEETIDLV 293
Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
S++ K+SGL Y+ + GK++I G+ H
Sbjct: 294 ESVRSKVSGLAARVRYV--MSHETGKIEI-----LGKGSDLIFFRYHR 334
>gi|239501163|ref|ZP_04660473.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB900]
Length = 338
Score = 302 bits (773), Expect = 7e-80, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 21 KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD 80
+ + S + + + +N +P DP+ Q +P EL PE DP+G+
Sbjct: 33 TDQLLSGAILASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGE 92
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ L G++H+Y R LL L C V+CR+CFRR + + ++D YI+
Sbjct: 93 EAANQLPGVLHKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIES 150
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I EVI +GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI L
Sbjct: 151 NPDINEVILSGGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLL 210
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
K + + + +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L
Sbjct: 211 KNSRLRIILVVHSNHASELDDFTCSKLLQLSGHHITVLNQAVLLKGVNDSAQTLTDLSYR 270
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E R+ PYYLH D G HF L E I + + G P + ++ G K
Sbjct: 271 LFEARVMPYYLHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKT 330
Query: 321 KI 322
+
Sbjct: 331 PL 332
>gi|315125467|ref|YP_004067470.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913]
gi|315013980|gb|ADT67318.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913]
Length = 308
Score = 301 bits (772), Expect = 1e-79, Method: Composition-based stats.
Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 3/306 (0%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
+ + + + + + + + I + NDP+ Q +P+ +E +DP
Sbjct: 2 VGLSSQVHENDIKARSLFPVRVPLPFIKKIRHGDANDPLLLQVMPRHQEFLTKSGFNKDP 61
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ + +++ G++H+Y R+L+ C V CR+CFRR + L+ + AL+Y
Sbjct: 62 LLEQDNNQ-PGLLHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LNKRSLIDALSY 118
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
IQ I EVI +GGDPL+ + L L I ++ +R HSR+P+V P RI +L
Sbjct: 119 IQADKNINEVILSGGDPLMAKDDAISWFLDELEQIPQIKRMRIHSRLPVVIPARITEQLC 178
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ L ++ V H NH E + A++ L A ++LL+Q+V+LK +ND + NL
Sbjct: 179 ERLAKSPLKVIFVNHINHANEIDSDFKNAMNMLKQANVLLLNQAVILKDVNDTVDAQINL 238
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ + PYYLH D G SHF + + KI+A L E + G P + ++ G
Sbjct: 239 SEALFDTDVMPYYLHLLDKVEGASHFDIDEAQAIKIMAELLEALPGFLVPKLVREIGGQK 298
Query: 318 GKVKID 323
K ID
Sbjct: 299 SKTPID 304
>gi|189346964|ref|YP_001943493.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM
245]
gi|189341111|gb|ACD90514.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM
245]
Length = 323
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 106/310 (34%), Positives = 166/310 (53%), Gaps = 7/310 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L+H +T+ + L + + + I + +T A L++ NP+DP+ + I
Sbjct: 5 RLKHDLITTQEQLAEYVTLTDAEKEGICRCRPIMPMKITRHYAELLDRDNPDDPLRKLAI 64
Query: 62 PQKEELNILPEEREDPIG--DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P EEL P++ I + + P++GI+HRYP ++LL C +CRFCFR E V
Sbjct: 65 PSVEELVRYPDDEAVDIHRDEAKYQPVEGIIHRYPGKVLLMYTTACFSHCRFCFRSEKV- 123
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ L + + A+ Y+++ I +VIFTGGDP+ + +RL+ L +R I HV+I+R
Sbjct: 124 ---ASTLDGRRLDKAIEYLRKNESIRDVIFTGGDPMHGNPERLEHALYEVRSIPHVEIIR 180
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R PI P+ ELI+ L KP+ + HP E S+E + + RL++AGI+LL
Sbjct: 181 ITTRAPIFAPEIFTDELIRMLSWF-KPLIMITSFIHPRELSDEVCSVLDRLSDAGIMLLQ 239
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q +LKGINDD + L L V+ R PYY ++ G HF L E +K++ L+
Sbjct: 240 QGPILKGINDDVDTLRTLYEKLVQHRTMPYYATWGIVSPGNRHFTLDGESARKLIRQLEN 299
Query: 300 KISGLCQPFY 309
SG C P
Sbjct: 300 TTSGFCIPHL 309
>gi|33152475|ref|NP_873828.1| hypothetical protein HD1410 [Haemophilus ducreyi 35000HP]
gi|33148698|gb|AAP96217.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 330
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 3/316 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+L + + + + + + A + + DP+ Q + ++E
Sbjct: 17 AFKDPVELLHFLELDPGLFQADIQARRLFPLRVPRPFAVKMRKGDRYDPLFLQAMSLQDE 76
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + +SP I+H+Y +R+L + + C + CR+CFRR ++ +
Sbjct: 77 FVQARGFSKDPLKEQ-YSPAPNILHKYQNRLLFMIKNSCAINCRYCFRRHFPYAEVKSGP 135
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ LAYI + ++ EVIF+GGDP++ L +L + I H++ LR H+R+P+
Sbjct: 136 L--AWQQGLAYIADYKELEEVIFSGGDPMMAKDNELAWLLTQIEQIPHIKTLRIHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RIN +L L ++ + + H NH E + + IS L A + +L+Q+VLLKG
Sbjct: 194 VIPNRINRQLCDRLSKSPLNIVVVTHINHANELDDILASKISLLKQANVTVLNQAVLLKG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ + L L I PYYLH D G SHF + ++ I L+ SG
Sbjct: 254 INDNAKTLKALNDKLFAAGILPYYLHLLDKVEGASHFFIDDQQALVIYKELQRISSGYLV 313
Query: 307 PFYILDLPGGYGKVKI 322
P ++ K I
Sbjct: 314 PKLAREIAQQPNKTLI 329
>gi|293609733|ref|ZP_06692035.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828185|gb|EFF86548.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 338
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 154/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++
Sbjct: 43 ASEKFKLRVPRAFVGKMNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C V+CR+CFRR + + ++D YI+ I E+I +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIEANPNINEIILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL LS+++L L+ L +K ++ILR HSRVPIV P RI+ +LI LK + + +
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQIEILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + +L++ I +L+Q+VLLKG+ND + L +L E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L + I + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLESSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332
>gi|208779105|ref|ZP_03246451.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida
FTG]
gi|208744905|gb|EDZ91203.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida
FTG]
Length = 328
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 4/313 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ + + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIPHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + + GII L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDDNVSKVLKEIHKHGIITLNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + + I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVD--NAKDIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGK 319
P ++PG K
Sbjct: 309 PVLTKEIPGYPSK 321
>gi|262372891|ref|ZP_06066170.1| lysine 2,3-aminomutase [Acinetobacter junii SH205]
gi|262312916|gb|EEY94001.1| lysine 2,3-aminomutase [Acinetobacter junii SH205]
Length = 338
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 2/302 (0%)
Query: 21 KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD 80
++ + S + + + ++ +P DP+ Q +P EL PE DP+G+
Sbjct: 33 TEQLLSGAIFASEQFKLRVPRAFVGKMSIGDPFDPLLLQVLPHHLELEDHPEFVTDPLGE 92
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ + G++H+Y R LL L C ++CR+CFRR + + + D YI++
Sbjct: 93 EAANQMAGVLHKYQSRFLLTLTGACAIHCRYCFRRHFPYQEN--LPKNDDWINIKQYIEQ 150
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
QI EVI +GGDPL LS+++L L+ L + ++ILR HSRVP+V P RI+ ELI L
Sbjct: 151 NPQINEVILSGGDPLTLSNRKLSLWLERLASLPQIKILRIHSRVPVVIPNRIDEELISIL 210
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
K + + + IH+NH E + + + +L+ I +L+Q+VLLKG+ND EIL NL
Sbjct: 211 KNSRLRIVVVIHSNHAAELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAEILNNLSLR 270
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ R+ PYYLH D G HF L E I + + G P + ++ G K
Sbjct: 271 LFDARVMPYYLHVLDKVKGAQHFDLRSSEIDHIYTDVLASLPGYLVPKLVREIAGEKNKT 330
Query: 321 KI 322
+
Sbjct: 331 PL 332
>gi|260549729|ref|ZP_05823946.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624]
gi|260407246|gb|EEX00722.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624]
Length = 338
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 103/292 (35%), Positives = 152/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++
Sbjct: 43 ASEKFKLRVPRAFVGKMNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C V+CR+CFRR + + + D YI+ I EVI +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWLNIKNYIEANPDINEVILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI LK + + +
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + L++ I +L+Q+VLLKG+ND + L +L E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLMELSSHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L E I + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLMPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|239625483|ref|ZP_04668514.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales
bacterium 1_7_47_FAA]
gi|239519713|gb|EEQ59579.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales
bacterium 1_7_47FAA]
Length = 387
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 99/343 (28%), Positives = 180/343 (52%), Gaps = 17/343 (4%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEE 66
+T A +L + Q++ + I + + + +T +LIN NP DP+ R IP EE
Sbjct: 31 ITKASELREYMDLTDSQVEHLDRILSQFPMTVTRYYLSLINWDNPFTDPVFRMCIPSIEE 90
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ + D G+ +++ + G+ H+Y L+ H C +YCR CFR+ +VG
Sbjct: 91 TDLSGDF--DTSGEADNTVISGLQHKYSQTALILSTHRCAMYCRHCFRKRLVGISDDE-- 146
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
++ + E AY+ + S+I ++ +GGD + S++ +++ L+ I H+ ++RF +R P+
Sbjct: 147 TADNIEEMAAYVSQHSEISNILISGGDAFLNSNQVIRRYLEQFCSIPHLDLIRFGTRTPV 206
Query: 187 VDPQRI--NPELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
V P RI +PEL+ LK K +Y+ NHP E + EA AI L ++GI++ +Q+V
Sbjct: 207 VLPMRIYDDPELLALLKTYTQKKQIYVVTQFNHPNEITHEARKAIKALLDSGIVVKNQTV 266
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKIVASLKEKI 301
LLKG+ND+ + L L++ + PYY+ +G + F+L +++G +IV + K
Sbjct: 267 LLKGVNDNSQTLGLLLKDLTRCGVIPYYIFQCRPVSGVKNQFQLPLKQGYEIVEAAKHLQ 326
Query: 302 SGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
+G + Y + GK++I + + +G H
Sbjct: 327 NGQGKCIRYA--MSHVTGKIEI----LGPMPDGQMLFKYHQAK 363
>gi|326560914|gb|EGE11279.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 7169]
gi|326563850|gb|EGE14101.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 46P47B1]
gi|326566861|gb|EGE17000.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 103P14B1]
gi|326571276|gb|EGE21298.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC1]
gi|326571582|gb|EGE21597.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC7]
gi|326576776|gb|EGE26683.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 101P30B1]
Length = 356
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 100/310 (32%), Positives = 162/310 (52%), Gaps = 3/310 (0%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
+ + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+
Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
D G +HF + I + + L E + G P + + P K ID
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPID-IYQYSNKK 345
Query: 333 GSYCITDHHN 342
I + N
Sbjct: 346 MKLMIKNACN 355
>gi|325921161|ref|ZP_08183030.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865]
gi|325548355|gb|EGD19340.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865]
Length = 342
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + ++L + E + + + + + + +DP+ RQ +
Sbjct: 24 QQWRDAVRDPRELLALLGLDAAAAGISAEAAAQFPLRVPRAFVARMRRGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ ++P D +GD G++ +Y R LL C V+CR+CFRR ++
Sbjct: 84 PLDAEMRLVPGFGLDAVGDGAAKIADGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR H
Sbjct: 144 E--TAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATSKLAELTDALAAIGHIKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+R++ L+ L+ PV IHANH EF AA+ + + G LL+Q+
Sbjct: 202 SRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFDSTVDAAMRAMRDTGAQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA L + PYYLH D AG +HF + + + L ++
Sbjct: 262 VLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDAHARALHTELATRL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++PG GK +
Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342
>gi|87310204|ref|ZP_01092336.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645]
gi|87287194|gb|EAQ79096.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645]
Length = 346
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 99/316 (31%), Positives = 164/316 (51%), Gaps = 2/316 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L +L + + + ++ + + + A + +P+DP+ Q +P E
Sbjct: 32 ALRDPAELCRLLQLPEACSEAAIAAASDFPLFVPREFAAKMTLGDPHDPLLVQVLPVLRE 91
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ DP+GD+ G++ +Y R LL C V+CR+CFRR ++ + +
Sbjct: 92 LDSPQGFTVDPVGDDQAVLTPGLLQKYAGRALLVTTGACAVHCRYCFRRHFPYAEVPSGV 151
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
A+A + I EV+ +GGDPL L+ L ++ + L I H++ +R H+R+PI
Sbjct: 152 --AAWSDAIAALAADPSIQEVLLSGGDPLTLADATLAQLAQQLAAIPHLRRIRVHTRLPI 209
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ PQRIN +L+ L + IHANHP E +AAI RL AG+++L+Q+VLL G
Sbjct: 210 MIPQRINDQLLSWLVGTRLTPIVVIHANHPRELDLPVVAAIDRLNQAGVMVLNQAVLLAG 269
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD ++LA L ++ R+ PYYLH D G +HF + E G ++ L+ ++ G
Sbjct: 270 VNDDVDVLAELSERLIDQRVTPYYLHQLDRVKGAAHFEVPRERGVDLIRQLRARLPGYAV 329
Query: 307 PFYILDLPGGYGKVKI 322
P Y+ ++ G K I
Sbjct: 330 PRYVEEIAGQPNKTII 345
>gi|299769252|ref|YP_003731278.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1]
gi|298699340|gb|ADI89905.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1]
Length = 338
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++
Sbjct: 43 ASEQFKLRVPRAFVGKMNAKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C V+CR+CFRR + + + D YI+ I E+I +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWLNIKNYIEANPHINEIILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL LS+++L L+ L +K ++ILR HSRVPIV P RI+ ELI LK + + +
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIVLV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L E I + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332
>gi|326575138|gb|EGE25066.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis CO72]
gi|326577548|gb|EGE27425.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis O35E]
Length = 356
Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats.
Identities = 99/310 (31%), Positives = 162/310 (52%), Gaps = 3/310 (0%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
+ + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+
Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
D G +HF + I + + L E + G P + + P K +D
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPLD-IYQYSNKK 345
Query: 333 GSYCITDHHN 342
I + N
Sbjct: 346 MKLMIKNACN 355
>gi|262278291|ref|ZP_06056076.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202]
gi|262258642|gb|EEY77375.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202]
Length = 338
Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 154/302 (50%), Gaps = 2/302 (0%)
Query: 21 KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD 80
+ + S + + + +N NP DP+ Q +P EL PE DP+G+
Sbjct: 33 TDQLLSGAILASEQFKLRVPRAFVGKMNVKNPFDPLLLQVLPHHLELEEHPEFVTDPLGE 92
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ L G++H+Y R LL L C V+CR+CFRR + + + D YI+
Sbjct: 93 EAANQLPGVLHKYQSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWPNIKNYIEA 150
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I E+I +GGDPL LS++++ L+ L +K ++ILR HSRVPIV P RI+ ELI L
Sbjct: 151 NPHINEIILSGGDPLTLSNRKIALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLL 210
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
K + + + +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L
Sbjct: 211 KNSRLRIILVVHSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYR 270
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E R+ PYYLH D G HF L E I + + G P + ++ G K
Sbjct: 271 LFEARVMPYYLHVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKT 330
Query: 321 KI 322
+
Sbjct: 331 PL 332
>gi|2754809|gb|AAC04238.1| 37.5 kDa protein [Buchnera aphidicola (Myzus persicae)]
Length = 337
Score = 299 bits (765), Expect = 6e-79, Method: Composition-based stats.
Identities = 102/313 (32%), Positives = 164/313 (52%), Gaps = 2/313 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++T ++L ++ + + + + + + ++P DP+ Q I E
Sbjct: 23 SITEPKELLKILNLENHPQYYTSKFNTLFPFRVPHSFVSRMKKNDPQDPLLLQVIINNRE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P+ +DPI + H L G++H+Y DR+LL + C ++CR+CFR+ +
Sbjct: 83 FLNSPKYVKDPIKEKKHIILPGLLHKYKDRVLLFVKTNCAIHCRYCFRKYFPYEKNQG-- 140
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + +L YIQ+ + EVIF+GGDPLI L ++ +L I H++ LR H+R+PI
Sbjct: 141 SKINWIKSLEYIQKNKNLNEVIFSGGDPLIAKDHELLWLITSLSKINHIKRLRIHTRLPI 200
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L + ++ + I H NHP E ++ ++ +L +G+I+L+QSVLLK
Sbjct: 201 VIPNRITSNLCEIFIQSSLKIIIVTHINHPQEINKNLSNSLLKLKESGVIMLNQSVLLKN 260
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDDP ILA L + I PYYLH D GT HF ++ ++ + I+ SL + ISG
Sbjct: 261 INDDPIILAELSNLLCDNNILPYYLHILDTVKGTMHFSVSSKKAKSIMKSLIKMISGYLI 320
Query: 307 PFYILDLPGGYGK 319
P + D K
Sbjct: 321 PRLVQDTGSQNSK 333
>gi|296112655|ref|YP_003626593.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4]
gi|295920350|gb|ADG60701.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4]
Length = 356
Score = 298 bits (764), Expect = 7e-79, Method: Composition-based stats.
Identities = 99/310 (31%), Positives = 162/310 (52%), Gaps = 3/310 (0%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
+ + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+
Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMAVDGYSTDPLDENNHNPIKGLLHK 108
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
D G +HF + I + + L E + G P + + P K +D
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPLD-IYQYSNKK 345
Query: 333 GSYCITDHHN 342
I + N
Sbjct: 346 MKLMIKNACN 355
>gi|56707865|ref|YP_169761.1| hypothetical protein FTT_0750 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670336|ref|YP_666893.1| hypothetical protein FTF0750 [Francisella tularensis subsp.
tularensis FSC198]
gi|134301708|ref|YP_001121676.1| hypothetical protein FTW_0659 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|224456943|ref|ZP_03665416.1| hypothetical protein FtultM_04156 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370360|ref|ZP_04986365.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254874680|ref|ZP_05247390.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604357|emb|CAG45383.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320669|emb|CAL08766.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC198]
gi|134049485|gb|ABO46556.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella
tularensis subsp. tularensis WY96-3418]
gi|151568603|gb|EDN34257.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254840679|gb|EET19115.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159045|gb|ADA78436.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella
tularensis subsp. tularensis NE061598]
Length = 328
Score = 298 bits (764), Expect = 7e-79, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 162/313 (51%), Gaps = 4/313 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RI +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERITTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGK 319
P ++PG K
Sbjct: 309 PVLTKEIPGYPSK 321
>gi|254372685|ref|ZP_04988174.1| hypothetical protein FTCG_00250 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570412|gb|EDN36066.1| hypothetical protein FTCG_00250 [Francisella novicida GA99-3549]
Length = 328
Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 4/313 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ + + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRIAHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + + I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVD--NAKDIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGK 319
P ++PG K
Sbjct: 309 PVLTKEIPGYPSK 321
>gi|21672314|ref|NP_660381.1| hypothetical protein BUsg020 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|22654299|sp|Q44634|Y020_BUCAP RecName: Full=Uncharacterized KamA family protein BUsg_020
gi|21622913|gb|AAM67592.1| hypothetical 38.7 kDa protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 337
Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats.
Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 2/306 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ + L ++K + + + A+ + ++P DP+ Q I + +E
Sbjct: 23 SIVEPKKLLKFLHLEKYPKYYDSKPKKVFPFRVPYSFASRMKKNDPKDPLLLQVITKNQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ EDP+ + L G++H+Y DR+L L C + CR+CFR+ +
Sbjct: 83 FLNNLQFNEDPVKEKKDIVLPGLLHKYKDRVLWILKTNCAINCRYCFRKHFPYEKNKG-- 140
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ K+ L YI + ++ EVI +GGDPL+ L ++ +L IKH++ LR H+R+PI
Sbjct: 141 NKKNWIQILHYISQNIELNEVILSGGDPLMAKDHELLWLITSLSKIKHIKRLRIHTRLPI 200
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI +L Q + + I H NHP E +E+ ++ +L + +ILL+QSVLLK
Sbjct: 201 VIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDSLLKLKKSNVILLNQSVLLKN 260
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ ILA L E I PYYLH D GTSHF ++ ++ + I++ L + ISG
Sbjct: 261 INDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVSNKKAKSIISDLMKMISGFLV 320
Query: 307 PFYILD 312
P + D
Sbjct: 321 PRLVFD 326
>gi|254369527|ref|ZP_04985538.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122481|gb|EDO66616.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 328
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 162/313 (51%), Gaps = 4/313 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + +H NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVVHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGK 319
P ++PG K
Sbjct: 309 PVLTKEIPGYPSK 321
>gi|298528428|ref|ZP_07015832.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512080|gb|EFI35982.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 370
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 90/335 (26%), Positives = 166/335 (49%), Gaps = 16/335 (4%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
D+ + ++++ + + + +L+N +P+DPI R IP +EL+
Sbjct: 9 DINKVPGLTGRDLEQLAPVMDTFEFRSNEYYLSLVNWDDPDDPIRRIIIPSVQELDQ--W 66
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDT 131
R D + ++S L G+ H+Y + C +CR+CFR+ + ++ VL+ D
Sbjct: 67 GRLDASNEQSYSVLPGLQHKYVSTAVFLASDACGGFCRYCFRKRLFIHPEQREVLT--DL 124
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+AA Y++ +I V+ TGGD L+LS RL+K++ LR I HV+I+R +++ P R
Sbjct: 125 DAACDYVRNHPEINNVLITGGDGLMLSTSRLEKIISRLRGIDHVKIIRIGTKLLSYSPYR 184
Query: 192 I--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ + EL++ +K+ P +Y H HP E ++ ++ A RL AG IL +Q+ +L+G
Sbjct: 185 VLNDQELLEMVKKYSLPDKRIYFMTHYTHPREMTDVSLEACDRLIKAGGILCNQTPMLRG 244
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDDP++L L + + PYY+ G + + +EE + + + SGL +
Sbjct: 245 VNDDPQVLGELFNRLSYMGVAPYYIFICRPTVGNKPYAVPVEEAFNVYQNARSMCSGLGK 304
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
L + GK++ + + + H
Sbjct: 305 RAK-LAMSHASGKIE-----ALAMTDENIIFRYHR 333
>gi|160938417|ref|ZP_02085772.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC
BAA-613]
gi|158438790|gb|EDP16547.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC
BAA-613]
Length = 419
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 103/348 (29%), Positives = 176/348 (50%), Gaps = 18/348 (5%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIARQFI 61
LR+ +T AQ+L + ++ + + I + + +T +LI+ +NP DP+ R I
Sbjct: 61 LRN-NVTRAQELKTYMRLTSQEEEHMTRILEQFPMTVTRYYLSLIDWNNPEQDPVFRMSI 119
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ++ + D G+ +++ L G+ H+Y L+ H C +YCR CFR+ +VG
Sbjct: 120 PSIRETDLSGDF--DTSGEADNTVLPGLQHKYRQTALILSTHRCAMYCRHCFRKRLVGIS 177
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + + AYI +I V+ +GGD + S++ +++ L+ IKH+ ++RF
Sbjct: 178 GGETAG--NVDQMAAYIVSHPEITNVLISGGDSFLNSNQIIRRYLEAFSSIKHLDLIRFG 235
Query: 182 SRVPIVDPQRI--NPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R P+V P RI +PEL+ L K +Y+ NH E + +A+ AI L +AGII+
Sbjct: 236 TRTPVVLPMRIYDDPELLDILARYTKIKQIYVVTQFNHSNELTPQAVKAIRCLMDAGIIV 295
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVAS 296
+Q+VLLKGINDD L L++ + PYY+ +G S F++ + EG +IV
Sbjct: 296 KNQTVLLKGINDDAGSLGTLLKNLTRYGVIPYYIFQCRPVSGVKSQFQIPLTEGCRIVEE 355
Query: 297 LKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
K +G + Y + GK++I + + + H
Sbjct: 356 AKNMQNGQGKCIRYA--MSHVTGKIEILGQ----MPDKNMLFKYHQAK 397
>gi|118497318|ref|YP_898368.1| hypothetical protein FTN_0722 [Francisella tularensis subsp.
novicida U112]
gi|195536004|ref|ZP_03079011.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis
subsp. novicida FTE]
gi|118423224|gb|ABK89614.1| aminomutase [Francisella novicida U112]
gi|194372481|gb|EDX27192.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis
subsp. novicida FTE]
Length = 328
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 159/313 (50%), Gaps = 4/313 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ + + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR H+R+PI
Sbjct: 131 GRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRIAHIKRLRIHTRIPI 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIITLNQSTLLKY 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + + I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVD--NAKDIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGK 319
P ++PG K
Sbjct: 309 PVLTKEIPGYPSK 321
>gi|226951346|ref|ZP_03821810.1| aminomutase [Acinetobacter sp. ATCC 27244]
gi|226837868|gb|EEH70251.1| aminomutase [Acinetobacter sp. ATCC 27244]
Length = 338
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 94/302 (31%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 21 KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD 80
+ + S + + + ++ +P DP+ Q +P EL PE DP+G+
Sbjct: 33 TDQLLSGAILASEQFKLRVPRAFVGKMSIGDPLDPLLLQVLPHHLELEEHPEFVTDPLGE 92
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ + G++H+Y R LL L C ++CR+CFRR + + + D E YI++
Sbjct: 93 EAANQMAGVLHKYRSRFLLTLTGACAIHCRYCFRRHFPYQEN--LPKNDDWENIKHYIEQ 150
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I EVI +GGDPL L+++++ L+ L + ++ILR HSRVPIV P R++ ELI L
Sbjct: 151 NPLINEVILSGGDPLTLNNRKISLWLERLASLPQIKILRIHSRVPIVIPNRVDEELISIL 210
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
K + + + +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L L
Sbjct: 211 KNSRLRIIVVVHSNHAAELDDFTCSKLLQLSLHHITVLNQAVLLKGVNDSAKTLTELSNR 270
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ R+ PYYLH D G HF L E I + + + G P + ++ G K
Sbjct: 271 LFDARVMPYYLHVLDKVKGAQHFDLRSSEIDHIYSDVLASLPGYLVPKLVREIAGEKNKT 330
Query: 321 KI 322
+
Sbjct: 331 PL 332
>gi|294650801|ref|ZP_06728149.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194]
gi|292823316|gb|EFF82171.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194]
Length = 338
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 94/302 (31%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 21 KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD 80
+ + S + + + ++ +P DP+ Q +P EL PE DP+G+
Sbjct: 33 TDQLLSGAILASEQFKLRVPRAFVGKMSIGDPLDPLLLQVLPHHLELEEHPEFVTDPLGE 92
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ + G++H+Y R LL L C ++CR+CFRR + + + D E YI++
Sbjct: 93 EAANQMAGVLHKYQSRFLLTLTGACAIHCRYCFRRHFPYQEN--LPKNDDWENIKHYIEQ 150
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I EVI +GGDPL L+++++ L+ L + ++ILR HSRVPIV P R++ ELI L
Sbjct: 151 NPLINEVILSGGDPLTLNNRKISLWLERLASLPQIKILRIHSRVPIVIPNRVDEELISIL 210
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
K + + + +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L L
Sbjct: 211 KNSRLRIIVVVHSNHAAELDDFTCSKLLQLSLHHITVLNQAVLLKGVNDSAKTLTELSNR 270
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ R+ PYYLH D G HF L E I + + + G P + ++ G K
Sbjct: 271 LFDARVMPYYLHVLDKVKGAQHFDLRSSEIDHIYSDVLASLPGYLVPKLVREIAGEKNKT 330
Query: 321 KI 322
+
Sbjct: 331 PL 332
>gi|254374142|ref|ZP_04989624.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151571862|gb|EDN37516.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 328
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 162/313 (51%), Gaps = 4/313 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIPHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGK 319
P ++PG K
Sbjct: 309 PVLTKEIPGYPSK 321
>gi|187931527|ref|YP_001891511.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147]
gi|187712436|gb|ACD30733.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147]
Length = 328
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 162/313 (51%), Gaps = 4/313 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDNEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGK 319
P ++PG K
Sbjct: 309 PVLTKEIPGYPSK 321
>gi|89256661|ref|YP_514023.1| hypothetical protein FTL_1362 [Francisella tularensis subsp.
holarctica LVS]
gi|115315075|ref|YP_763798.1| hypothetical protein FTH_1327 [Francisella tularensis subsp.
holarctica OSU18]
gi|156502809|ref|YP_001428874.1| hypothetical protein FTA_1443 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010527|ref|ZP_02275458.1| radical SAM domain protein [Francisella tularensis subsp.
holarctica FSC200]
gi|290953399|ref|ZP_06558020.1| hypothetical protein FtulhU_03333 [Francisella tularensis subsp.
holarctica URFT1]
gi|295313360|ref|ZP_06803969.1| hypothetical protein FtulhU_03323 [Francisella tularensis subsp.
holarctica URFT1]
gi|89144492|emb|CAJ79801.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica LVS]
gi|115129974|gb|ABI83161.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
gi|156253412|gb|ABU61918.1| lysine 2,3-aminomutase, YodO family protein [Francisella tularensis
subsp. holarctica FTNF002-00]
Length = 328
Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 163/313 (52%), Gaps = 4/313 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL +C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGK 319
P ++PG K
Sbjct: 309 PVLTKEIPGYPSK 321
>gi|57340042|gb|AAW50008.1| hypothetical protein FTT0750 [synthetic construct]
Length = 363
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 162/313 (51%), Gaps = 4/313 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 39 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 98
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 99 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 156
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 157 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 216
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RI +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 217 VLPERITTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 276
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 277 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 334
Query: 307 PFYILDLPGGYGK 319
P ++PG K
Sbjct: 335 PVLTKEIPGYPSK 347
>gi|149916871|ref|ZP_01905372.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
gi|149822149|gb|EDM81540.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
Length = 471
Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats.
Identities = 99/339 (29%), Positives = 171/339 (50%), Gaps = 22/339 (6%)
Query: 2 QLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDPI 56
Q++ +++T L L + + +++E + ++P + LI+ P DPI
Sbjct: 66 QMK-RSVTKVDKLLAGLADLASEAFVADLREGFRRAPMAVRVSPYMIALIDWSKPYADPI 124
Query: 57 ARQFIPQKEEL-NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
RQFIP EL P+ D + + +P+ G+ HRYPD+ L L CPVYCRFC R
Sbjct: 125 RRQFIPTGSELLPDHPKLDLDSLHEQADAPVPGLTHRYPDKALFLALDTCPVYCRFCTRS 184
Query: 116 EMVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
VG V ++ EAA YI + ++ +++ +GGD L ++ + + L
Sbjct: 185 YAVGLDTEEVEKVSLKPTNDRWEAAFEYIASRPELEDIVISGGDSYNLRADHIKTIGERL 244
Query: 170 RYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEFS 220
+ +++ +RF ++ P V PQ+I + + L ++ K V I H NHP E +
Sbjct: 245 LAMPNIRRMRFATKGPAVMPQKILTDTAWVDALTSIHEQGRKLHKEVCIHTHFNHPNEIT 304
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
+ + A++ L GI + +QSVL +G+ND PE + L++ + + PYY++ DL G
Sbjct: 305 QISQRAMNLLFERGITVRNQSVLQRGVNDTPEAMGQLVKRLAHVNVHPYYVYVHDLVRGV 364
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ R T++ I ++ +G P +++D PGG GK
Sbjct: 365 ENLRTTVQTATAIEKEIRGMTAGFNTPVFVVDAPGGGGK 403
>gi|254498454|ref|ZP_05111183.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12]
gi|254352309|gb|EET11115.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12]
Length = 328
Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats.
Identities = 109/318 (34%), Positives = 154/318 (48%), Gaps = 5/318 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +S L N + + +S + A + NP DP+ Q +
Sbjct: 14 QGFSSVAALLNYLELPCD--AGSLLAEKQFSSRIPLGFAQRMQKGNPQDPLLLQVLAVAT 71
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I DP+ + + +PLKG++H+Y R+LL L VC V CRFCFRR
Sbjct: 72 ELEIQDGYEFDPLRERDSNPLKGLIHKYHGRVLLTLTGVCAVNCRFCFRRHFPYQDN--N 129
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ AYI + S I EVI +GGDPL+ S ++L+ L I HV +RFH+R+P
Sbjct: 130 PGRHGFKDICAYIAKDSSITEVILSGGDPLLASDLVFSELLQQLEQIPHVHTVRFHTRIP 189
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLL 244
IV P+RI+ L+ L I +H NHP E +E A+ L AG LL+Q+VLL
Sbjct: 190 IVFPERIDHGLLCVLATTKLKKVIVLHCNHPQELNDDEVRHALRALRQAGCHLLNQTVLL 249
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
GIND+ ILA L + + PYYLH D G +HF L + Q I L++ + G
Sbjct: 250 SGINDNAPILAALSQALFAQDVIPYYLHILDKVKGAAHFDLPLATVQTIYQQLQQLVPGY 309
Query: 305 CQPFYILDLPGGYGKVKI 322
P + PG K +
Sbjct: 310 LLPRLACEEPGKLSKTLL 327
>gi|307719756|ref|YP_003875288.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192]
gi|306533481|gb|ADN03015.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192]
Length = 324
Score = 295 bits (756), Expect = 6e-78, Method: Composition-based stats.
Identities = 117/314 (37%), Positives = 172/314 (54%), Gaps = 5/314 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+TP L + + +ARQ P E LP E DP+ D HSPL +VHRYP
Sbjct: 3 LPFLVTPYYRRL---ADAHPALARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYP 59
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
DR L+ + C YCRFCFRR + + L+ +A LAY++E ++ EV+ +GGDP
Sbjct: 60 DRALILVTDRCAAYCRFCFRR-HFTASGASSLTPGQEQAILAYLREHPEVEEVLLSGGDP 118
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+L RL +L LR ++ ++R +R+P+V P RI L + A +P+++ H N
Sbjct: 119 LMLPDTRLAALLSGLRALRPGLVIRLGTRIPVVLPARITARLARI-LAAARPLWVVTHFN 177
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E + EA AA+ L G+ +++Q+VLL+G+ND E LA L R + +KPYYL
Sbjct: 178 HPAELTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQG 237
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
DLAAGTSHFR + + L +SGL P +DLP G GKV++ ++ +
Sbjct: 238 DLAAGTSHFRTPLSRTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETW 297
Query: 335 YCITDHHNIVHDYP 348
Y + ++ YP
Sbjct: 298 YYLQGPDGGLYRYP 311
>gi|298528426|ref|ZP_07015830.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512078|gb|EFI35980.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 521
Score = 295 bits (756), Expect = 7e-78, Method: Composition-based stats.
Identities = 106/354 (29%), Positives = 174/354 (49%), Gaps = 11/354 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLR + S + L + + ++E+ ++ Y + LTP A LI P + +DP+ Q +
Sbjct: 158 QLR-YAIESPRTLESILNLPAGALEEVGRVTKDYRMRLTPYYAGLIMPESLDDPVLLQSV 216
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ++ E P +HSP + I YP + +K ++C +YC C R +G
Sbjct: 217 PTGEMVDNAGVEM--PPVAADHSPARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIGK- 273
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K + + AL YI+ +I +V+ TGGD +L K L+ +L L ++HV+I R
Sbjct: 274 KDRIYPEQAYSEALDYIRRDRRIRDVLITGGDAFMLPDKVLRYMLSELDGMEHVRIKRLG 333
Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R+P+ PQR++ EL+ L+E+ KPV + N E + + A R++ A +L+
Sbjct: 334 TRIPVTTPQRVDQELLDILEESNDKKPVRVVTQINTAQEITPVSREAFRRISKAVSAVLN 393
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLK 298
Q+VLLKGIND +A+L T E ++PYY+ + SH R+ +E+G+ IV +
Sbjct: 394 QAVLLKGINDSFVKMAHLCETIQEAYVRPYYIFNCSYRNPQFSHLRVPVEKGRDIVEGMY 453
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD-HHNIVHDYPPKS 351
ISG P Y + GK+ + N+ G + YP
Sbjct: 454 GNISGDAIPRY---IATAGGKIPLHRSNVLDREQGDIILQKPWSGEQVRYPDAD 504
>gi|193214957|ref|YP_001996156.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium
ATCC 35110]
gi|193088434|gb|ACF13709.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium
ATCC 35110]
Length = 465
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 89/389 (22%), Positives = 157/389 (40%), Gaps = 49/389 (12%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQ 63
TL + +++ + ++ + I + + + + + LI+ N PNDPI PQ
Sbjct: 27 YTLKNFRNIQQLKHLPEDVVSAIAVVGHVFPFKVNSYVTEKLIDWGNAPNDPIFTLTFPQ 86
Query: 64 KEELNILPEE--------------------------REDPIGDNNHSPLK-------GIV 90
K L E P G + K G+
Sbjct: 87 KGMLLPHHYEIVQALLAENAPKSKLAKAINQIREELNPHPAGQLEFNVPKLNGQKIDGLQ 146
Query: 91 HRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
H+Y + L C YC +CFR G +++ E +AY++ ++I +V+
Sbjct: 147 HKYNETALFFPSEGQSCHAYCTYCFRWPQFGENDDLKIATNQIENVIAYLKHHTEISDVL 206
Query: 149 FTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPEL--------IQ 198
TGGDPL +S K L K + L + H++ +R ++ P R E +
Sbjct: 207 ITGGDPLTMSAKSLSKYVLALLSEDLPHIRTIRIGTKTLTYWPYRFLTEKDSEQLLDAFR 266
Query: 199 CLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ +GK + + H NHP E + E AI R+ G ++ +QS +++GINDD +I + L
Sbjct: 267 MIVRSGKHLALMTHFNHPVELETPEVAEAIQRIRETGAVIRTQSPIIRGINDDAKIWSAL 326
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ V L + PYY+ P FR+++ +I + +SG+C+ +
Sbjct: 327 WKRQVSLGLVPYYMFIPRDTGAQHFFRISLVRAWEIFKEAYQHVSGICRTVRGPSMSTNP 386
Query: 318 GKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GKV++ + G + D
Sbjct: 387 GKVQVMG-VCEVNGQKVISLQFLQGRNPD 414
>gi|225569398|ref|ZP_03778423.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM
15053]
gi|225161606|gb|EEG74225.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM
15053]
Length = 393
Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats.
Identities = 114/350 (32%), Positives = 184/350 (52%), Gaps = 17/350 (4%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
LRH +T+ +L + I Y +++ +LIN + D I + IP
Sbjct: 36 LRH-NITTLDELAAYIPGIDTGDCNARNILEKYPMSVPRYYLSLINTDDEGDCIRKMSIP 94
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E++I D G+++++ L+G+ H+YP +LL + C +YCR+CFR+ MVGS
Sbjct: 95 SFSEMDIT--GTFDTSGESSNTKLRGLQHKYPQTVLLLSTNRCAMYCRYCFRKRMVGSHT 152
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++ +D + A++YI E ++I V+ +GGD +L + ++ L L I H+ +RF +
Sbjct: 153 EEIV--EDIDKAVSYIAEHTEISNVLISGGDSFLLDNAAIEHYLSALCSIGHIDYIRFGT 210
Query: 183 RVPIVDPQRINP--ELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+VP+V PQRI EL LK+ K +Y+ NHP E +E A+ A++ L + G+I+
Sbjct: 211 KVPVVFPQRITDDRELQDILKKYCTKKQLYVMTQFNHPSELTEHAVNAVNCLKSLGLIVK 270
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKIVASL 297
+Q+VLLKGINDDP +LA LM+ F ++ I PYY+ G + F++ + G IV
Sbjct: 271 NQTVLLKGINDDPAVLAGLMKQFTKIGILPYYVFQCRPVTGVKNQFQVPLRTGYDIVEQA 330
Query: 298 KEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
K +G + Y L P GKV+I I K+ + H D
Sbjct: 331 KRLQNGNGKCFRYALSNPD--GKVEI----IGKMDDSHMIFKYHQAKNPD 374
>gi|241668391|ref|ZP_04755969.1| lysine 2,3-aminomutase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876924|ref|ZP_05249634.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842945|gb|EET21359.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 328
Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats.
Identities = 99/310 (31%), Positives = 160/310 (51%), Gaps = 4/310 (1%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
S +L I E+ I+ + + + AN + N NDP+ +Q +P +E I
Sbjct: 16 SPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVI 75
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
DP+ + N++ + G++H+Y R+LL C ++CR+CFR+E K + K
Sbjct: 76 DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRK 133
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
D A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P
Sbjct: 134 DWLKAFEYIANDQTIEEVILSGGDPLLNNDEVLEFFIENIQQISHIKRLRIHSRIPVVLP 193
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+R+ +L++ L E + IH NHP E + + + GII+L+QS LLK IND
Sbjct: 194 ERMTNKLLKILSEHRLDTVLVIHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDIND 253
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D +L L + ++ PYY+H D +GT H+ + + I+ L E SG P
Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVD--CAKDIMKKLSEISSGFMVPIL 311
Query: 310 ILDLPGGYGK 319
++PG K
Sbjct: 312 TKEIPGYPSK 321
>gi|91772254|ref|YP_564946.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
gi|91711269|gb|ABE51196.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
Length = 441
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 88/392 (22%), Positives = 159/392 (40%), Gaps = 49/392 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
R TL++ +++ +EQ ++I + + + + + LIN N PNDP+ R
Sbjct: 14 FRAYTLSNYKEIPQIQNFTQEQQEDIGIAARIFPFRVNNYVIDELINWDNVPNDPMFRLT 73
Query: 61 IPQKEEL--------------------------------NILPEERED-PIGDNNHSPLK 87
P K+ L N P + D + + N L+
Sbjct: 74 FPNKDMLLPPHYKEMKHLLHTAASEEEVQQAIHKIRLTLNPHPAGQLDKNVPELNGKVLE 133
Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L C +C FCFR K +S++ E ++Y+QE ++
Sbjct: 134 GMQHKYNETVLFFPTQGQTCHTFCTFCFRWAQFTGMKDLKFASREIETLVSYLQEHPEVK 193
Query: 146 EVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE-------- 195
+V+FTGGDP+ +S L++ ++ + I+ ++ +R ++ PQR +
Sbjct: 194 DVLFTGGDPMTMSANLLKRYIEPILEADIRTIENIRIGTKSLSYWPQRFVSDKDSEDILS 253
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + K + I H NHP E + + AI + G + +QS L+ INDDP I
Sbjct: 254 LFSNVTDHNKHMAIMGHFNHPVELTTDTVKEAIKNIRATGAQIRTQSPLIAHINDDPVIW 313
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+ R V L PYY+ +F I + +I + +SGL + +
Sbjct: 314 EQMWREQVRLGCIPYYMFMVRNTGANHYFDTPISKAWEIFQEAYQNVSGLARTVRGPSMS 373
Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GK+ + + G + +
Sbjct: 374 TDPGKINVLGT-QEINGEKVFVLEFLQGRDCR 404
>gi|167627832|ref|YP_001678332.1| lysine 2,3-aminomutase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597833|gb|ABZ87831.1| Lysine 2,3-aminomutase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 328
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 98/310 (31%), Positives = 158/310 (50%), Gaps = 4/310 (1%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
S +L I E+ I+ + + + AN + N NDP+ +Q +P +E I
Sbjct: 16 SPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVI 75
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
DP+ + N++ + G++H+Y R+LL C ++CR+CFR+E K + K
Sbjct: 76 DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRK 133
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
D A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ R HSR+P+V P
Sbjct: 134 DWLKAFEYIANDQTIEEVILSGGDPLLNNDEVLEFFIENIQRISHIKRFRIHSRIPVVLP 193
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+R+ L++ L E + IH NHP E + + + GII+L+QS LLK IND
Sbjct: 194 ERMTNRLLKILSEHRLDTVLVIHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDIND 253
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D +L L + ++ PYY+H D +GT H+ + + I+ L E SG P
Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVD--CAKDIMKKLSEISSGFMVPIL 311
Query: 310 ILDLPGGYGK 319
++PG K
Sbjct: 312 TKEIPGYPSK 321
>gi|326566522|gb|EGE16668.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 12P80B1]
gi|326569812|gb|EGE19862.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC8]
Length = 345
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 98/291 (33%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
+ + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+
Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF + I + + L E + G P + + P K ID
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPID 337
>gi|193211898|ref|YP_001997851.1| radical SAM domain-containing protein [Chlorobaculum parvum NCIB
8327]
gi|193085375|gb|ACF10651.1| Radical SAM domain protein [Chlorobaculum parvum NCIB 8327]
Length = 433
Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats.
Identities = 90/397 (22%), Positives = 170/397 (42%), Gaps = 47/397 (11%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIAR 58
+ + T + Q L + I EQ+ IK ++ Y + +A NLI+ N P+DP+ R
Sbjct: 2 LTFQSYTAENIQQLPQYDTIPPEQLHAIKVVAEVYPFRVNSHVAENLIDWSNIPDDPMFR 61
Query: 59 QFIPQKEEL--------------------------NILPEEREDPIGDNNHS-------P 85
PQ L I + +P G + P
Sbjct: 62 LSFPQAGMLSGEDFRTISDLVLSDADSQLIRQEARKIQLRQNPNPAGQMELNTPRLDGEP 121
Query: 86 LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L VC YC +CFR + +++ + + Y++ +
Sbjct: 122 LHGMQHKYRESVLFFPLEAQVCHAYCTYCFRWPQFSGLESLKFANESVDKLIDYLRSHPE 181
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----PELIQ 198
+ +VIFTGGDP+++S + ++K ++ L + ++ +R ++ P R +LI+
Sbjct: 182 VKDVIFTGGDPMVMSTELIEKYMRPLLDVPTLRTIRIGTKSLSWWPGRFTTDSDADQLIR 241
Query: 199 CLKE---AGKPVYIAIHANHPYEFS-EEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+E +GK + I H +HP E EA+ A+ R+ + G ++ SQS +++ +NDD E+
Sbjct: 242 FFEEVVTSGKHLAIMAHMSHPREIDNPEAVDAVRRIRSTGAVIRSQSPVVRHVNDDSEVW 301
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+ + V+L + PYY+ +F + + E I ++SGL + +
Sbjct: 302 EEMWQKQVQLGVIPYYMFLERDTGPKHYFEVPLAEALDIYNGAYRQMSGLGRTVRGPSMS 361
Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
GKV I + + + ++ K+
Sbjct: 362 CSPGKV-IVEDVTEINDEKLFVLKFTQGRNPEWTNKT 397
>gi|315185344|gb|EFU19118.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta thermophila
DSM 6578]
Length = 324
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 118/314 (37%), Positives = 173/314 (55%), Gaps = 5/314 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+TP L + +P +ARQ P E LP E DP+ D HSPL +VHRYP
Sbjct: 3 LPFLVTPYYRRLAD-THP--ALARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYP 59
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
DR L+ + C YCRFCFRR + + L+ +A LAY++E ++ EV+ +GGDP
Sbjct: 60 DRALILVTDRCAAYCRFCFRR-HFTASGESSLTPGQEQAILAYLREHPEVEEVLLSGGDP 118
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+L RL +L LR ++ ++R +R+P+V P RI L + A +P+++ H N
Sbjct: 119 LMLPDTRLAALLSGLRALRPGLVIRLGTRIPVVLPTRITARLARI-LAAARPLWVVTHFN 177
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E + EA AA+ L G+ +++Q+VLL+G+ND E LA L R + +KPYYL
Sbjct: 178 HPAELTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQG 237
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
DLAAGTSHFR + + L +SGL P +DLP G GKV++ ++ +
Sbjct: 238 DLAAGTSHFRTPLSHTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETW 297
Query: 335 YCITDHHNIVHDYP 348
Y + ++ YP
Sbjct: 298 YYLQGPDGGLYRYP 311
>gi|328676803|gb|AEB27673.1| Lysine 2,3-aminomutase [Francisella cf. novicida Fx1]
Length = 328
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 4/313 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQISCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWSKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIVHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + + I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVD--NAKDIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGK 319
P ++PG K
Sbjct: 309 PVLTKEIPGYPSK 321
>gi|320591241|gb|EFX03680.1| L-lysine-aminomutase [Grosmannia clavigera kw1407]
Length = 487
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 25/335 (7%)
Query: 41 PVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
P + + IN +P NDPI RQF+P K + P+ D + ++ SP+ G+V+RYP++ L
Sbjct: 139 PYVLSRINWKDPRNDPIFRQFLPVKSRMIPDHPKLTLDSLHESADSPVSGLVYRYPEKAL 198
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKG------TVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
VCP YC FC R VG + + E AYI+ + + +++ +GG
Sbjct: 199 FLPTSVCPTYCMFCTRSYAVGGNTESVKKASMKPTKRRWEEVFAYIESQPALQDIVVSGG 258
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-------KE 202
D L+ +L V + L + +++ RF S+ V P RI L ++
Sbjct: 259 DAYYLTPDQLAYVGERLIAMPNIRRFRFASKGVAVAPARILDAEDSWFDALSYVATQARK 318
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
AGK + + H NHP E S A +L+ AGI++ +Q+VLL+G+NDD ++ L+R
Sbjct: 319 AGKAMALHTHFNHPNEISWVTEQAARKLSEAGIMVRNQTVLLRGVNDDVATMSTLIRKLA 378
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ I PYY++ D+ H R ++ I A ++ I+G P +++DLPGG GK
Sbjct: 379 DNIIFPYYVYQCDMVEKVEHLRTPLQTILDIEAQIRGSIAGFMMPQFVVDLPGGGGKRLA 438
Query: 323 DT--HNIKKVGNGSYCI-----TDHHNIVHDYPPK 350
+ + G + D N V++Y
Sbjct: 439 CSHLDYDRNTGVSRFMAPAVTGRDKDNKVYEYYDP 473
>gi|220934891|ref|YP_002513790.1| radical SAM domain-containing protein [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996201|gb|ACL72803.1| radical SAM domain-containing protein [Thioalkalivibrio sp.
HL-EbGR7]
Length = 455
Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats.
Identities = 97/387 (25%), Positives = 157/387 (40%), Gaps = 50/387 (12%)
Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEE 66
S + + + + Q E+K +++ + + N LI+ N P DPI + PQK
Sbjct: 27 RSLEKIPQLAKLSEAQRFEMKVVASVLPFRVNEYVINELIDWSNIPADPIFQLTFPQKGM 86
Query: 67 LNILPEER--------------------------EDPIGDNNHS-------PLKGIVHRY 93
L ER P G + ++G+ H+Y
Sbjct: 87 LAPESYERMAELHRRGADKAHISALAKELRDGLNPHPAGQLEMNLPRVNGEVVEGLQHKY 146
Query: 94 PDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ +L C YC FCFR K ++S + L Y++E Q+ +++ TG
Sbjct: 147 RETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLRIASNQKDQVLGYLREHPQVTDLLVTG 206
Query: 152 GDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINPE--------LIQCL 200
GDP+++ K L + L+ L + HVQ +R ++ P R + L+ L
Sbjct: 207 GDPMVMKTKNLAQYLEPLMEDDSLAHVQTVRIGTKALTFWPYRFVTDNDADELLDLLTRL 266
Query: 201 KEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
++G+ V I H NH E + A AI RL G+ + SQ LL INDDP + A L +
Sbjct: 267 VKSGRQVAIMAHYNHWRELETPIAREAIRRLRETGVEIRSQGPLLAHINDDPAVWARLWK 326
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
T V+L I PYY+ +F + + I +++SGL + + G GK
Sbjct: 327 TQVQLGIIPYYMFVERDTGARHYFEVPLARAANIYREAMKQVSGLGRTARGPSMSAGPGK 386
Query: 320 VKIDTHNIKKVGNGSYCITDHHNIVHD 346
V+I G + + D
Sbjct: 387 VEIQGVAEI-QGEKVFVLRFIQARNPD 412
>gi|13474986|ref|NP_106545.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
gi|14025732|dbj|BAB52331.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
Length = 427
Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats.
Identities = 109/370 (29%), Positives = 172/370 (46%), Gaps = 24/370 (6%)
Query: 5 HKTLTSAQDLYNANLIKKE--QIDEIKEISNHYSI--ALTPVIANLINPHN-PNDPIARQ 59
H +T L + I +++ + +TP + NLI+ N DPI +Q
Sbjct: 21 HHAVTRVDQLREWMGADADGNLIRDVERGLARAPMALRITPYLLNLIDWSNFLEDPIRKQ 80
Query: 60 FIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
FIP EL P + D + + SP+ G+VHRY D++LL CPVYCRFC R V
Sbjct: 81 FIPVGSELLPSHPLLKMDSLHERKSSPVDGLVHRYKDKVLLLATDRCPVYCRFCTRSYSV 140
Query: 119 GSQKGTVLSSK------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
G +VL K + LAY++ I +V+ +GGD L RL + L I
Sbjct: 141 GLDTQSVLKKKVSPFQSRWDTILAYLRVTPVIADVVVSGGDCFRLKPSRLLAIGMGLLSI 200
Query: 173 KHVQILRFHSRVPIVDPQRINPE--LIQCL-------KEAGKPVYIAIHANHPYEFSEEA 223
++ +RF ++ V P +I + L ++ G + H NHP E ++
Sbjct: 201 PSIRRIRFATKGLAVLPMKITSDHKWTDALVNISDAGRDQGVEISFHTHFNHPREITDYT 260
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
IAA L GI + +QSVL+ G+NDDPE++ L++ +L I+PYY++ DL G H
Sbjct: 261 IAAAELLFKRGIRMRNQSVLMAGVNDDPEVMKQLVKKLSDLHIQPYYVYTCDLVDGIEHM 320
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH-- 341
R ++ +I +++ +G P +++D PGG GK + + G
Sbjct: 321 RCSVRLACQIEKAVRGITAGYNTPLFVVDTPGGGGKRDVHSFEHYNTQTGLAVYRALSVR 380
Query: 342 -NIVHDYPPK 350
+ + YP
Sbjct: 381 PDQLFTYPDP 390
>gi|167758002|ref|ZP_02430129.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704]
gi|167664434|gb|EDS08564.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704]
Length = 363
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 109/342 (31%), Positives = 186/342 (54%), Gaps = 16/342 (4%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T+ +L + E D ++ N Y +++ +L+NP + NDPI + IP E+
Sbjct: 11 VTTLDELSASIPQINEYGDIASKVLNKYPMSIPRYYLSLVNPDDANDPIRKMCIPSFLEM 70
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
++ D G+++++ L+G+ H+YP +L+ + C +YCR+CFR+ MVGS V+
Sbjct: 71 DLA--GTFDTSGESSNTKLQGLQHKYPQTVLMLSTNRCAMYCRYCFRKRMVGSGTQEVV- 127
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
D + A++YI + +I V+ +GGD +L +++ L +L I H+ +RF ++ P+V
Sbjct: 128 -ADIKEAISYILKHEEITNVLISGGDSFLLDTDIIREYLDSLSAIGHLDYIRFGTKTPVV 186
Query: 188 DPQRI--NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
PQRI + L L+E G K +YI NHP E +E++I+A+ L G+I+ +Q+VL
Sbjct: 187 FPQRILEDSRLQDILREYGHKKQIYIVTQFNHPRELTEDSISAVRCLQGLGLIVKNQTVL 246
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG-TSHFRLTIEEGQKIVASLKEKIS 302
LKG+ND PE LA L R F EL I PYY+ G + F++ ++ G I+ K +
Sbjct: 247 LKGVNDCPETLARLFRRFTELGIIPYYIFQCRPVTGVMNQFQVPLQAGYDIIEQAKAMQN 306
Query: 303 GLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
G + ++L P GK++I + + +G H
Sbjct: 307 GNGKCFRFVLSNPD--GKIEI----LGRTADGQMVFKYHQAK 342
>gi|146328795|ref|YP_001209500.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A]
gi|146232265|gb|ABQ13243.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A]
Length = 304
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 131/292 (44%), Positives = 196/292 (67%), Gaps = 5/292 (1%)
Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
+ Y + ++ + +LIN IARQF+P ++EL + PEE DPIGD HSP+ +VH
Sbjct: 2 TRDYPVRISKTMNDLINHSA---AIARQFLPSEDELTVAPEELRDPIGDEAHSPVDFLVH 58
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RY +R+L K+ VC V+CRFCFRRE++G QKG+ + A Y+++ +I EVI +G
Sbjct: 59 RYRNRVLWKVTQVCAVHCRFCFRRELIG-QKGSRPDEAAIQQAHDYMRQHHEIEEVILSG 117
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDP+ LS +RL+ + L I+H++ +R H+R+PIV P++I E + L++ GK + +
Sbjct: 118 GDPMTLSAERLRLYVAPLLEIEHIRRIRVHTRMPIVAPEQIKEEWLTTLQKTGKQIVYVL 177
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H NH EF+ + + ++RLA + LLSQ+VLL+G+NDD +LA LM F+ RIKPYYL
Sbjct: 178 HVNHADEFNPASDSLLARLATDHL-LLSQTVLLRGVNDDAAVLAQLMEAFLARRIKPYYL 236
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
HH DLA GT HFR+TI+EG+ I L++ +SG+ P YI+++PGG GK+ +
Sbjct: 237 HHLDLARGTGHFRVTIDEGRAIYQQLRQYVSGIALPTYIVEIPGGDGKIAVM 288
>gi|312213471|emb|CBX93553.1| hypothetical protein [Leptosphaeria maculans]
Length = 595
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 96/325 (29%), Positives = 160/325 (49%), Gaps = 20/325 (6%)
Query: 15 YNANLIKKEQIDEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIPQKE-ELNIL 70
K++ I + +A+ TP I + ++ +NP +DPI RQF+P K +
Sbjct: 115 LKHIRTKEDFIRDAISALKLAPMAIRLTPHILSRVDWNNPLDDPIRRQFLPLKSGMIPDH 174
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV----- 125
+ D + + SP+ G+VHRYP R L +CPVYCRFC R VG TV
Sbjct: 175 EHMKLDSLNEEADSPVPGLVHRYPGRALFLATSICPVYCRFCTRSYAVGGNTDTVAKRAQ 234
Query: 126 -LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ E YI++ + +++ +GGD L L+++++ L I H+ +R ++
Sbjct: 235 KPNRARWEVIFKYIEDNDSLQDIVLSGGDIFYLEPHLLREIVERLLSIPHIFRIRLATKG 294
Query: 185 PIVDPQRI---NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
V P R N + L ++ GK V + H NH E + A RL G
Sbjct: 295 LSVAPGRFLDTNDGWMDTLMDISNQGRKLGKQVCLHTHINHASEITWVTRMAARRLFAHG 354
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+I+ +Q+VLL G+N++P+ + L+ T + I+PYY++ D+ G R + E ++
Sbjct: 355 VIVRNQTVLLNGVNNNPDAIKELITTLANINIQPYYVYQCDMVQGIEDLRTPLSEILRLD 414
Query: 295 ASLKEKISGLCQPFYILDLPGGYGK 319
++ +SG P +++DLPGG GK
Sbjct: 415 KLMRGTLSGFMMPAFVIDLPGGGGK 439
>gi|225849592|ref|YP_002729826.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1]
gi|225646452|gb|ACO04638.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1]
Length = 438
Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats.
Identities = 84/395 (21%), Positives = 159/395 (40%), Gaps = 51/395 (12%)
Query: 1 MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIA 57
M+ R T+ + + + + ++Q +I+ + + + + + LIN +P NDPI
Sbjct: 1 MRYRSYTVKNFRTIPQVEKYLTEKQKFDIEVVGQVFPFKVNNYVIDQLINWEDPLNDPIF 60
Query: 58 RQFIPQKE--------------------------------ELNILPEEREDPIGDNNHSP 85
R PQK+ ELN P ++ + + +
Sbjct: 61 RLTFPQKDMLFPEHYELIARLLKNGEPQEKIREEANRIRMELNPHPAGQKYNVPEVDGIK 120
Query: 86 LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G H+Y + IL C YC FCFR + K+ + + YI+ +
Sbjct: 121 LHGAQHKYKETILFFPKQGQTCHAYCSFCFRWPQFVGINELKFAMKEVDVLIEYIKRNPE 180
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINP------- 194
I +++FTGGDPLI+ L+ ++ + I H++ +R ++ P R
Sbjct: 181 ITDILFTGGDPLIMKTSVLKSYIQPVLEANIPHLKTIRIGTKSLGFWPYRFTEDEDAQEL 240
Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+L + + + G + H NH E ++ A+ ++ G ++ +QS +L+ IND E
Sbjct: 241 LDLFRQIVDRGYHLAFMAHFNHYKELRTDVVREAVDKILETGAVIRTQSPVLRHINDSSE 300
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
+ A + + V + + PYY+ +F + + I +K SGL +
Sbjct: 301 VWATMWKEQVSMGMIPYYMFMARDTGAQHYFGVPLVRAWNIFRDAYKKTSGLARTVKGPS 360
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDH-HNIVHD 346
+ GKV+I + ++ + D D
Sbjct: 361 MSATPGKVRILG--VSEIFGEKVMVLDFLQGRNPD 393
>gi|114320341|ref|YP_742024.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226735|gb|ABI56534.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
Length = 456
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 89/393 (22%), Positives = 165/393 (41%), Gaps = 49/393 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQ 59
+ + T + + + + +++ ++ ++N + + N LI+ P+DPI +
Sbjct: 20 RFQVFTARNMDKIPGLDRMPEDERFAMRVVANVLPFRVNEYVINELIDWEKAPDDPIYQL 79
Query: 60 FIPQKE--------------------------------ELNILPEE-REDPIGDNNHSPL 86
IPQ+ ELN P + + ++ L
Sbjct: 80 TIPQRGMLAPALFDRMADVLRRDASREEINRVAWEIRNELNPHPAGQMKLNVPQHDGEKL 139
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+G+ H+Y + +L VC YC FCFR K +S + E AY+++ ++
Sbjct: 140 EGMQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFVGDKDLQFASNEAERLHAYLRDHREV 199
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
+++ TGGDP+++ ++L++ L L ++HVQ +R ++ P R +
Sbjct: 200 SDLLLTGGDPMVMKTRKLEEYLDPLLAADLEHVQTVRLGTKALTFWPYRFVTDKDADDLL 259
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + L +G+ V + H NHP E + A AI R+ + G+ + +Q LL IND E
Sbjct: 260 RLFERLVNSGRHVALMAHYNHPQELKTPIAEEAIRRIRDTGVEIRAQGPLLAHINDSSEA 319
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L R V L I PYY+ +F + + +I +++SGL + +
Sbjct: 320 WAELWRKQVRLGIIPYYMFVERDTGARHYFEVPLARAWEIYRDAMKQVSGLGRTARGPSM 379
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
G GKV++ + G + + D
Sbjct: 380 SAGPGKVEVQGI-TEVQGEKVFVLRFIQGRNPD 411
>gi|254516177|ref|ZP_05128237.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR5-3]
gi|219675899|gb|EED32265.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR5-3]
Length = 345
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 97/330 (29%), Positives = 165/330 (50%), Gaps = 4/330 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL++ + + DL A I E + + + + A I N DP+ RQ +
Sbjct: 19 QLQN-AIRTPTDLAAAVGIALEDLPYSLAADRGFPLLVPRAFAARIERGNVADPLLRQIL 77
Query: 62 PQKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
++E I+ +DP+ + + ++ G++ +Y R LL + C + CR+CFRR+ +
Sbjct: 78 AAQDETRIVTGYSKDPLAETSLYAGTPGLLQKYTGRALLVVTGQCAINCRYCFRRDYPYA 137
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
SS + A + + + I E+I +GGDPL+L +++ + + + + LR
Sbjct: 138 DNAQ--SSAERLATIDRLLDDPSIGEIILSGGDPLLLPDEQIAAMARRIARHQRSVTLRI 195
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+R+P+V P+R+ LIQ L E G P + +H+NHP E AI L AG +L+Q
Sbjct: 196 HTRLPMVIPERVTDSLIQALSERGLPSVMVLHSNHPNEIDAPTAHAIKSLREAGTTVLNQ 255
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL G+ND PE+LA+L PYY+H D AG +HF ++ + ++I+ L
Sbjct: 256 SVLLAGVNDKPEVLAHLSDRLFAAGALPYYIHMLDKVAGAAHFEVSEDSARRIMGELSGM 315
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
G P +++ PG K +++
Sbjct: 316 RPGYLVPRLVIERPGAGSKQQLEPIYPSAR 345
>gi|282890405|ref|ZP_06298933.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499787|gb|EFB42078.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 326
Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats.
Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 6/320 (1%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+ + T + L + + EI + + + L +A I + +DPI +QF+P
Sbjct: 12 ILRQNFTQWKKLADFLELDPSIQQEIFK-RPSFPLNLPKRLAEKIKKNTLDDPILKQFLP 70
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E L DP+GD + ++H+Y R L+ C + CRFCFR+ +
Sbjct: 71 TLAEQKQLAGFTLDPVGDTQFTKAPKLLHKYNGRALIVCTSACVMNCRFCFRQNFDYEVQ 130
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ L I + E+I +GGDPL LS L +L L +IKHV+ +RFH+
Sbjct: 131 EKGFQKE-----LELIAADETLQEIILSGGDPLSLSDTVLVHLLDALSHIKHVKRVRFHT 185
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R PI P+RI+ + + + +H NHP E + + L G+ILL+QSV
Sbjct: 186 RFPIGIPERIDDAFLNLFENRPFITWFVLHTNHPNELDDHIFHHLHLLQRKGVILLTQSV 245
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+ND P++L L V I PYYLH D G +HF ++ E G++++ + + +
Sbjct: 246 LLKGVNDCPKVLCELFNQLVNRGIIPYYLHQLDRVQGGAHFEVSEERGKELIQEIAKSLP 305
Query: 303 GLCQPFYILDLPGGYGKVKI 322
G P Y+ ++ G K +
Sbjct: 306 GYAVPKYVREIAGEPNKTPL 325
>gi|254427342|ref|ZP_05041049.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881]
gi|196193511|gb|EDX88470.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881]
Length = 463
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 90/390 (23%), Positives = 157/390 (40%), Gaps = 46/390 (11%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + E + ++N + + N LIN N PNDPI +
Sbjct: 34 RFKVYTARQLDKIEPLKRLDDETRFAMDVVANVLPFRVNEYVINELINWDNVPNDPIYQL 93
Query: 60 FIPQKEELNILPEE-------------------------REDPIGDNNHSPLK------- 87
PQK L + P G H+ +
Sbjct: 94 TFPQKGMLAPEHFDKVAEAMRGGDKAEIKATIAEVREALNPHPAGQMEHNMPEVDGEKID 153
Query: 88 GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L VC YC FCFR +++K+ YIQ +I
Sbjct: 154 GVQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKIATKEAGQLKKYIQAHPEIS 213
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELI 197
+V+ TGGDPL++ K L+ ++ L ++ ++ +R S+ PQR+ +L
Sbjct: 214 DVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALTFWPQRVVSDADAQDLLDLF 273
Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ + +GK + + H NH E ++ A A+ R+ G ++ +Q LL IND+ + A
Sbjct: 274 EEVIASGKHLALMAHYNHWQELETDIAREAVKRVRATGAVIRAQGPLLAHINDNADDWAR 333
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L +T VEL I PYY+ +F + + + +I +++SG+ + +
Sbjct: 334 LWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWEIYRDAMKQVSGIARTARGPSMSSH 393
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GKV+I G + + HD
Sbjct: 394 PGKVEIQGVTEI-NGEKVFALRFIQGRNHD 422
>gi|328675885|gb|AEB28560.1| Lysine 2,3-aminomutase [Francisella cf. novicida 3523]
Length = 328
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 4/310 (1%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
S +L I Q +++ + + + AN I N NDP+ +Q +P +E I
Sbjct: 16 SPLELLEFLQIDINQARVSIDVTKSFKMIVPKSFANRIQKGNINDPLLKQVLPIVDEEVI 75
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + K
Sbjct: 76 DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKDNIPGRK 133
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
D A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P
Sbjct: 134 DWLQAFEYIANDQSIEEVILSGGDPLLNNDEVLEFFIENIQQIAHIKRLRIHSRIPVVLP 193
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+RI +L++ L E + IH NHP E + + + GII+L+QS LLK IND
Sbjct: 194 ERITTKLLRVLSEHRLDTILVIHVNHPNELDDNISEVLKEIHKHGIIILNQSTLLKDIND 253
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D +L L + ++ PYY+H D +GT H+ + + I+ L E SG P
Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVD--NAKDIMKKLSEISSGFMVPVL 311
Query: 310 ILDLPGGYGK 319
++PG K
Sbjct: 312 TKEIPGYPSK 321
>gi|117924254|ref|YP_864871.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1]
gi|117608010|gb|ABK43465.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1]
Length = 305
Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 158/302 (52%), Gaps = 3/302 (0%)
Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81
+ + + + + LTP +A+ + DPI RQF P EEL P DP+ +
Sbjct: 5 PQLTPQQQLAHRGFPMLLTPTMADCMRQPQEQDPIYRQFWPSAEELQNPPHYTTDPLQEA 64
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
SP+ G+VH+Y R LL L CPV+CR+CFRR + + + + + ++ +
Sbjct: 65 ASSPMPGLVHKYQGRALLHLTDACPVHCRYCFRRH---GAITSPMDPQAEQQLVDHLAQD 121
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ E+I +GGDPL+L+ + + L + H+Q +R HSRVP+ DP R+ +++ L+
Sbjct: 122 HTLQEIILSGGDPLMLNAPKWHWWMTQLAQLPHLQRIRIHSRVPVADPSRLTIPMLETLQ 181
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
K V + IH NH E + + A+ AG ++L+QSVLL G+ND EILA L
Sbjct: 182 NTAKSVVLVIHCNHAQELTPASEVALQACRQAGFLVLNQSVLLAGVNDSAEILAKLNLAL 241
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
V L + PYYLH D G +HF ++ + +I+ L + + G P + + P GK
Sbjct: 242 VGLGVLPYYLHLLDTVQGAAHFEVSPQRAMEIMRQLHQCLPGYALPKLVRERPELPGKEP 301
Query: 322 ID 323
I
Sbjct: 302 IH 303
>gi|145631426|ref|ZP_01787196.1| DNA repair protein RecO [Haemophilus influenzae R3021]
gi|144982963|gb|EDJ90472.1| DNA repair protein RecO [Haemophilus influenzae R3021]
Length = 297
Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats.
Identities = 94/281 (33%), Positives = 141/281 (50%), Gaps = 3/281 (1%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIATHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
LLK +NDD +IL L + I PYYLH D G SHF
Sbjct: 257 LLKSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHF 297
>gi|297563081|ref|YP_003682055.1| hypothetical protein Ndas_4154 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847529|gb|ADH69549.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 454
Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats.
Identities = 78/383 (20%), Positives = 152/383 (39%), Gaps = 49/383 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R T +L + ++ ++ ++ + + + LI+ P+DPI R
Sbjct: 16 RFRAYTTKHLDELTTRAGLAADERLAVQAVATVLPFRVNSYVVDELIDWDAAPDDPIYRL 75
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHS--------P 85
PQ + L R P G + + P
Sbjct: 76 VFPQADMLPQDDVSRIADLLRSGAQRKELNEAANQIRARLNPHPAGQMDLNVPKLANEEP 135
Query: 86 LKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ G+ H+Y + +L C YC +CFR +S + + + Y++ +
Sbjct: 136 IPGVQHKYKETVLFFPKQGQTCHAYCTYCFRWAQFVGDADLKFASSEIDQLVDYVRSHPE 195
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPE 195
+ V+FTGGDP+I+ + K ++ L I+H++ +R ++ PQR
Sbjct: 196 VTSVLFTGGDPMIMGEGVISKYIEPLLEIEHLEAIRIGTKALAYWPQRFVTDPDADDTLR 255
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + +GK + H +HP E E A A+ R+ G ++ +Q+ L++ INDD +
Sbjct: 256 LFEKVVASGKNLAFMAHFSHPNEMRPELAQEAVRRIRATGAVIRTQAPLIRTINDDSAVW 315
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
++ RT + + PYY+ +F + + E +I + +SGL + +
Sbjct: 316 ESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYEIFRGAYKSVSGLARTVRGPSMS 375
Query: 315 GGYGKVKIDTHNIKKVGNGSYCI 337
GKV + + +V +
Sbjct: 376 ATPGKVCV--DGVTEVAGQKVFV 396
>gi|289620587|emb|CBI52948.1| unnamed protein product [Sordaria macrospora]
Length = 517
Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats.
Identities = 109/377 (28%), Positives = 184/377 (48%), Gaps = 42/377 (11%)
Query: 1 MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
MQ++ + + D + +I +TP I + +N +P +DPI
Sbjct: 154 MQMQSRDKFIKDVLD---------------GVTAATMAIRMTPYILSRVNWQDPRHDPIV 198
Query: 58 RQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
RQF+P K L P+ D + + SP+KG+VHRY D+ L VCP YC FC R
Sbjct: 199 RQFLPMKSIMLPDHPKLTLDSLHETADSPVKGLVHRYTDKALFLPTSVCPTYCMFCTRSY 258
Query: 117 MVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
VG+ TV + + E A AYI+ + ++ +++ +GGD L ++L + + L
Sbjct: 259 AVGADTDTVTKASLKPTRRRWEEAFAYIESRPELQDIVVSGGDAYYLQPEQLTLIGERLI 318
Query: 171 YIKHVQILRFHSRVPIVDPQRINPE---LIQCL-------KEAGKPVYIAIHANHPYEFS 220
+ +++ RF S+ V P RI E + L K+AGK + + H N+P E S
Sbjct: 319 SMPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISNKAKKAGKSMALHTHFNNPNEIS 378
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
+ A +L G+++ +Q+VLL+G+NDD E ++ L+R + I PYY++ D+
Sbjct: 379 WVSSDATQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQLADNNITPYYVYQCDMVERV 438
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT--HNIKKVGNGSYCI- 337
H R ++ + A ++ I+G P +++DLPGG GK + + +K G ++
Sbjct: 439 EHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGKRLACSHQNYDRKTGVSTFMAP 498
Query: 338 ----TDHHNIVHDYPPK 350
D N V++Y
Sbjct: 499 AVTSRDKANKVYEYYDP 515
>gi|110834678|ref|YP_693537.1| L-lysine 2,3-aminomutase [Alcanivorax borkumensis SK2]
gi|110647789|emb|CAL17265.1| L-lysine 2,3-aminomutase, putative [Alcanivorax borkumensis SK2]
Length = 462
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 91/390 (23%), Positives = 156/390 (40%), Gaps = 46/390 (11%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + E + ++N + + N LIN N PNDPI +
Sbjct: 34 RFKVYTARQLDKIEPLQRLDDETRFAMDVVANVLPFRVNEYVINELINWDNVPNDPIYQL 93
Query: 60 FIPQKEELNILPEE-------------------------REDPIGDNNHS-------PLK 87
PQK L + P G H+ ++
Sbjct: 94 TFPQKGMLAPEHFDKVADAMRGGDKTAIKTAIAEVREALNPHPAGQMEHNIPEVDGEKIE 153
Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
GI H+Y + +L VC YC FCFR +++K+ YIQ +I
Sbjct: 154 GIQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKIATKEAGQLKKYIQAHPEIS 213
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197
+V+ TGGDPL++ K L+ ++ L ++ ++ +R S+ PQR+ + L
Sbjct: 214 DVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALTFWPQRVVSDADAKDLLHLF 273
Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ + +GK + + H NH E + A A+ R+ G ++ +Q LL IND+ + A
Sbjct: 274 EEVIASGKHLALMAHYNHWQELQTNIAREAVKRVRATGAVIRAQGPLLAHINDNADDWAR 333
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L +T VEL I PYY+ +F + + + I +++SG+ + +
Sbjct: 334 LWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWNIYRDAMKQVSGIARTARGPSMSSH 393
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GKV+I G + + HD
Sbjct: 394 PGKVEIQGVTEI-NGEKVFALRFIQGRNHD 422
>gi|162450720|ref|YP_001613087.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
gi|161161302|emb|CAN92607.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
Length = 461
Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/335 (29%), Positives = 167/335 (49%), Gaps = 21/335 (6%)
Query: 6 KTLTSAQDLYNANL--IKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDPIARQF 60
K++T L + + + I + E + ++P + +LI+ ++P DP+ QF
Sbjct: 63 KSITRPDKLLDTLRGMVSDDFIRDATEGFARAPMSVRVSPYMLSLIDWNDPYGDPLRTQF 122
Query: 61 IPQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
IP L P+ D + + +P+ G+ HRY D+ L L CPVYCRFC R VG
Sbjct: 123 IPLASRFLPDHPKLGLDSLHERADAPVPGLTHRYADKALFLPLDTCPVYCRFCTRSYAVG 182
Query: 120 SQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
V + + + A AYI + ++ +++ +GGD L ++L + +TL +
Sbjct: 183 IDTEEVEKTHFKVDEERWKRAYAYIASRPELEDIVVSGGDAYNLRPEQLGAIGETLLRMP 242
Query: 174 HVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAI 224
++Q +R ++ P V PQ+I + E I + ++ K V I H NHP E +
Sbjct: 243 NIQRIRLATKGPAVMPQKILTDDEWIDAVTRTVELGRKLHKEVVIHTHFNHPNEITGVTR 302
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A+++L GI + +QSVL +G+ND PE + L++ + + PYY++ DL G R
Sbjct: 303 DAMNKLFERGITVRNQSVLQRGVNDTPETMKLLVKRLGHVHVHPYYVYIHDLVRGVEDLR 362
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
T+ G I ++ +G P +++D PGG GK
Sbjct: 363 TTLATGLTIEKHVRGSTAGFNTPTFVVDAPGGGGK 397
>gi|317121265|ref|YP_004101268.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885]
gi|315591245|gb|ADU50541.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885]
Length = 361
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 103/340 (30%), Positives = 169/340 (49%), Gaps = 15/340 (4%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
D+ + E+ ++ ++ Y + +LI+ +P+DPI R IP + EL
Sbjct: 7 DIREIEQLAAEERQRLRPVTETYVFRVNDYYLSLIDWDDPDDPIRRIVIPSEVEL--AEY 64
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
DP + ++ G H+Y LL + VC YCRFCFR+ + S D E
Sbjct: 65 GSLDPSDEESNYVAPGCQHKYGPTALLLVSKVCGAYCRFCFRKRLFREDVEEHHVSMDVE 124
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L YI +I V+ TGGDPL+LS +RL ++L LR I HV+++R +++P +P R+
Sbjct: 125 PGLRYIAAHPEITNVLLTGGDPLMLSPRRLDQILTRLRAIPHVKVIRIGTKIPAFEPMRV 184
Query: 193 NP--ELIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
EL++ L+ + ++ ++H NHP E +EEA+ I L G+ L++Q+ LL+ +
Sbjct: 185 TDNPELLEVLRRHSRADARIHFSLHFNHPREMTEEALRCIIALQEVGVTLVNQTPLLRRV 244
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDDP +LA L+ I PYY+ AG + F + + EG +IV K ++SG +
Sbjct: 245 NDDPAVLAELLERLTWWGIAPYYIFQNRPVAGNADFVVPLREGYRIVEQAKARVSGYAKR 304
Query: 308 -FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
Y+ + GK++I V + H +
Sbjct: 305 VRYV--MSHATGKIEI-----LAVEGERIYLKYHQARNPE 337
>gi|120556236|ref|YP_960587.1| radical SAM domain-containing protein [Marinobacter aquaeolei VT8]
gi|120326085|gb|ABM20400.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8]
Length = 454
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 96/393 (24%), Positives = 157/393 (39%), Gaps = 49/393 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + +E + E+K +++ + + N LIN PNDPI +
Sbjct: 20 RFKVFTDRQLDKIEAIQNLPEETLFEMKVVASVLPFRVNEYVINELINWDKVPNDPIYQL 79
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHSPLK------ 87
PQK L ER P G + +
Sbjct: 80 VFPQKGMLKDEHYERMAQLHREGADKKDIQAAAKEIRDALNPHPAGQMEMNMPELDGEVL 139
Query: 88 -GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR K ++S D E Y+QE +++
Sbjct: 140 DGVQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLKMASTDAEKLHGYLQEHTEV 199
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINP-------- 194
+++ TGGDP+++ K L + L+ L H+Q +R ++ P R
Sbjct: 200 TDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
EL L + GK V I H NH E + + A AI R+ G + +Q L+K +NDD +
Sbjct: 260 ELFARLVDGGKHVAIMAHYNHWQEITTDIAEEAIRRIRATGAEIRAQGPLIKHVNDDADA 319
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L + V+L I PYY+ ++F + + E I +++SGL + +
Sbjct: 320 WAKLWKKEVKLGIIPYYMFVERDTGAKNYFEVPLAEAYHIYREAMKQVSGLARTARGPSM 379
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
G GKV+I G + + D
Sbjct: 380 SAGPGKVEIQGITEI-NGEKVFVLRFLQGRNPD 411
>gi|119946889|ref|YP_944569.1| lysine 2,3-aminomutase YodO family protein [Psychromonas ingrahamii
37]
gi|119865493|gb|ABM04970.1| L-lysine 2,3-aminomutase [Psychromonas ingrahamii 37]
Length = 337
Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 155/316 (49%), Gaps = 3/316 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + Q L I E + + +S+ + + + NDP+ +Q +P ++E
Sbjct: 23 TVKNPQQLLQLLDISPENVPLSLKARKSFSMLVPMPFVKKMKKGDINDPLLQQVLPIEDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + ++S L G++H+Y R+LL L C + CR+CFRR +
Sbjct: 83 ELVSEGYSTDPL-EEHNSALPGLLHKYQSRVLLILKSGCAINCRYCFRRHFPYQDN--NI 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ K + + YI+ ++ EVI +GGDPL+ LQ V+ L + ++ LR HSR+P+
Sbjct: 140 NKKQLQEIITYIKSHPEVNEVILSGGDPLMSKDDFLQHVINELELLPQLRRLRLHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI +L ++ V +H NH E + A+++L AG+ LL+QSVLLKG
Sbjct: 200 VIPSRITDQLCHMFNKSRLNVVFVLHINHANEIDQIFKDAMNKLHQAGVQLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ + L +L E I PYYL D G HF L + ++ + + G
Sbjct: 260 INDNSQALVDLSEALFEAHILPYYLFLLDKVQGAQHFDLPEQRAIQLTQEMSAALPGYLV 319
Query: 307 PFYILDLPGGYGKVKI 322
P ++ G K I
Sbjct: 320 PRLSREIAGEKNKTLI 335
>gi|292491849|ref|YP_003527288.1| L-lysine 2,3-aminomutase [Nitrosococcus halophilus Nc4]
gi|291580444|gb|ADE14901.1| L-lysine 2,3-aminomutase, putative [Nitrosococcus halophilus Nc4]
Length = 446
Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats.
Identities = 93/390 (23%), Positives = 157/390 (40%), Gaps = 49/390 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + E+ E++ ++ + + N LI+ N P+DPI +
Sbjct: 22 RFKVFTARQLDQIPQLQKLSAERRFEMEVVARVLPFRVNEYVINELIDWGNVPDDPIFQL 81
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHSPL------- 86
IPQ++ L R P G +
Sbjct: 82 TIPQRDMLAPEHFNRVASAIIRGADRKTLDAVIREVRAELNPHPAGQMEDNIPTLNGERV 141
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+G+ H+Y + +L VC YC FCFR K +++K+T AY++ ++
Sbjct: 142 EGLQHKYRETVLFFPSSGQVCHSYCTFCFRWAQFVGDKELKIAAKETHQLQAYLRAHPEV 201
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP-------- 194
+V+ TGGDPL++ + L+ L+ L HV+ +R ++ PQR
Sbjct: 202 TDVLVTGGDPLVMKTRNLRAYLEPLLGEAFSHVKTIRIGTKSLTFWPQRFVTDDDADDLL 261
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + ++ AGK + + H NH E A AI R+ G + SQ LL INDD I
Sbjct: 262 ALFEEIQGAGKHLALMAHYNHWQELEPAIAREAIRRVRATGAQIRSQGPLLAHINDDANI 321
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L RT V L I PYY+ ++F + + + +I +K+SG+ + +
Sbjct: 322 WARLWRTQVGLGIIPYYMFVERDTGARNYFEVPLIKAWQIYRDAIQKVSGIGRTARGPSM 381
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GKV+I + G + +
Sbjct: 382 SAHPGKVEIQG-VTEIQGEKAIVLRMIQGR 410
>gi|72160676|ref|YP_288333.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX]
gi|71914408|gb|AAZ54310.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX]
Length = 453
Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats.
Identities = 79/382 (20%), Positives = 154/382 (40%), Gaps = 48/382 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R T +L +E+ I+ ++ + + + LI+ P+DPI R
Sbjct: 16 RFRAYTSKHLDELTARAGFGEEERLAIRAVATVLPFRVNSYVIDELIDWDAAPDDPIYRL 75
Query: 60 FIPQKEELNILPEER--------------------------EDPIGD-------NNHSPL 86
PQ + L R P G + P+
Sbjct: 76 TFPQADMLPEADVARIADLLRKDAPRQEINRVASEVRARLNPHPAGQLQLNLPKMDDEPM 135
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+YP+ +L C YC +CFR + ++S + + +AY+++ ++
Sbjct: 136 PGVQHKYPETVLFFPKQGQTCHSYCTYCFRWAQFVGEPDLKMASDEIDRLVAYLRQHPEV 195
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPEL 196
V+ TGGDP+I+ L++ ++ L ++ ++ +R ++ PQR L
Sbjct: 196 TGVLLTGGDPMIMGEAVLRRYIEPLLEVETLESIRIGTKALAYWPQRFVTDPDADDTLRL 255
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + +GK + H +HP E + A+ R+ + G ++ +Q+ L++ IND E A
Sbjct: 256 FEQVVNSGKNLAFMAHFSHPRELEPDIVREAVRRIRDTGAVIRTQAPLIRTINDSSETWA 315
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ RT V L + PYY+ +F + + + +I +SGL + +
Sbjct: 316 TMWRTQVRLGMIPYYMFVERDTGPQDYFAVPLAQAYEIFRKAYNSVSGLARTVRGPSMSA 375
Query: 316 GYGKVKIDTHNIKKVGNGSYCI 337
GKV + I ++ +
Sbjct: 376 TPGKVCV--DGITEINGEKVFM 395
>gi|189500343|ref|YP_001959813.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides
BS1]
gi|189495784|gb|ACE04332.1| radical SAM domain protein [Chlorobium phaeobacteroides BS1]
Length = 434
Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats.
Identities = 93/392 (23%), Positives = 171/392 (43%), Gaps = 47/392 (11%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVI-ANLINPHN-PNDPIAR 58
++ R T + L I +EQI +K ++ Y + + NLI+ N P DPI R
Sbjct: 2 LKYRSYTADNLHTLPQYGEIPEEQIHIVKTVATVYPFRVNSYVTENLIDWSNIPEDPIFR 61
Query: 59 QFIPQKEELNILPEER--------------------------EDPIGDN-------NHSP 85
PQ+E LN +R +P G ++
Sbjct: 62 LSFPQEEMLNPEDFQRMSGLVSTDAPQDIIRQAAREIQLLQNPNPAGQMELNTPLLDNEV 121
Query: 86 LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L GI H+Y + +L VC YC +CFR + ++ D L Y++E +
Sbjct: 122 LHGIQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLESLKFANNDITLLLDYLKEHPE 181
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195
+ ++IFTGGDP+++S ++K ++ L I V+ +R ++ P R E
Sbjct: 182 VKDIIFTGGDPMVMSTALIKKYIQPLLDIPTVKTIRIGTKALSWWPYRFTAEHDSDEILS 241
Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+ + +GK + I H +HP E + +A+ AI+R+ + G ++ SQS +++ +NDD +I
Sbjct: 242 FFEQIVSSGKHLAIMAHISHPREIETSQAVDAINRIRSTGAVIRSQSPIVRHVNDDADIW 301
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+ + ++L I PYY+ +F + + E +I + +++SGL + +
Sbjct: 302 EAMWQKQLQLGIIPYYMFLERDTGPKQYFEIPLSEAVEIFNTAYQRMSGLGRTVRGPSMS 361
Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GK+ I + G + + + +
Sbjct: 362 CAPGKI-IVQDITEIHGEKVFVLKFTQSRNPE 392
>gi|269469270|gb|EEZ80789.1| lysine 2,3-aminomutase [uncultured SUP05 cluster bacterium]
Length = 314
Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats.
Identities = 98/284 (34%), Positives = 161/284 (56%), Gaps = 6/284 (2%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
H+ I + ANLI+ +NP DP+ +Q I + P+ D +++P++G++H+
Sbjct: 31 QHFPIKIPLEFANLIDKNNPEDPLLKQVINSQARFGSSEFF-LSPLDDESNAPVEGLIHK 89
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP+R+LL VC ++C++CFR+ ++ + + A YI+ +QI EVI +GG
Sbjct: 90 YPNRVLLIASRVCAIHCQYCFRQNFNYAEHDAL---SNWLAIEDYIRAHTQINEVILSGG 146
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL LS ++LQ +++ + I H++ LR HSR +V P RI +L Q L + V + +H
Sbjct: 147 DPLSLSDEKLQALIQKIERIPHIRTLRIHSRSAVVTPSRITDQLAQILNQTSLNVVVVLH 206
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+NH E S E + I +L+ I LL+QSVLLKG+ND + L++L + + PYYLH
Sbjct: 207 SNHANELSSEFVKNIGKLSQ--ITLLNQSVLLKGVNDSAQALSDLSLQLFDAGVLPYYLH 264
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
D +G HF + + +++ LK+ +SG P + D G
Sbjct: 265 LLDKVSGAEHFLVGDQCAKELHQQLKKNLSGYLVPRLVRDENGE 308
>gi|126642456|ref|YP_001085440.1| putative aminomutase [Acinetobacter baumannii ATCC 17978]
Length = 280
Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats.
Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C
Sbjct: 1 MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 60
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L
Sbjct: 61 VHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 118
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + +
Sbjct: 119 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 178
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L
Sbjct: 179 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 238
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
E I + + G P + ++ G K +
Sbjct: 239 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 274
>gi|311695938|gb|ADP98811.1| lysine 2,3-aminomutase-like protein [marine bacterium HP15]
Length = 454
Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats.
Identities = 97/393 (24%), Positives = 162/393 (41%), Gaps = 49/393 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + +E + E+K +++ + + N LIN PNDPI +
Sbjct: 20 RFKVYTDRQLDKIEVIQNLPEETLFEMKVVASVLPFRVNEYVINELINWDKVPNDPIYQL 79
Query: 60 FIPQK--------------------------------EELNILPEERED-PIGDNNHSPL 86
PQK +ELN P + + + + + L
Sbjct: 80 VFPQKGMLKEEHYERMATMHREGADKKEIQAVAKEIRDELNPHPAGQMEMNMPELDGEVL 139
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR K ++S + E Y+QE +++
Sbjct: 140 DGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLKMASTEAEKLHGYLQEHTEV 199
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------- 195
+++ TGGDP+++ K L + L+ L H+Q +R ++ P R +
Sbjct: 200 TDLLVTGGDPMVMKTKNLVQYLEPLLEPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L L +AGK V I H NH E + E A AI R+ G + +Q L+K +NDD +
Sbjct: 260 DLFARLVDAGKHVAIMAHYNHWQEITTEIAEEAIRRIRATGAEIRAQGPLIKHVNDDADA 319
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L + V+L I PYY+ ++F + + E I +K+SGL + +
Sbjct: 320 WAKLWKKEVQLGIIPYYMFVERDTGAKNYFEVPLAEAFHIYREAMKKVSGLARTARGPSM 379
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
G GKV+I G + + D
Sbjct: 380 SAGPGKVEIQGITEI-NGEKVFVLRFLQGRNPD 411
>gi|78357789|ref|YP_389238.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220194|gb|ABB39543.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 384
Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats.
Identities = 100/329 (30%), Positives = 160/329 (48%), Gaps = 15/329 (4%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
+ ++ ++ + +Y+ +LIN +P DPI R +P +E DP
Sbjct: 15 LPLDAQEARALRPVMEYYAFRANDYYLSLINWDDPADPIRRIIVPHPDETKD--WGELDP 72
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ ++ + G+ H+Y D +L C CRFCFR+ + +G DT ALAY
Sbjct: 73 SDEARYTAVPGMQHKYRDTAILLAGKACGGLCRFCFRKRIF--MEGGTPPVPDTGKALAY 130
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE 195
I+ +I V+ +GGDPL+L L+ +LK L ++H+Q +R SR+P+ DP I N
Sbjct: 131 IRAHKEITNVLISGGDPLLLPLAELEHILKGLDTVEHLQFIRIGSRMPVFDPGLIAGNTR 190
Query: 196 LIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L++ L +P +Y+ H NHP E S A+ A+ L AGII+ +Q+ LL+G+ND PE
Sbjct: 191 LLELLSRYSRPGRKLYMQTHFNHPRELSPLALEAVDALQRAGIIMTNQTPLLRGVNDCPE 250
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
L+ L + PYYL G HF + IEEG I+ ++ +SG +
Sbjct: 251 TLSELFAKLAGAGVPPYYLFVCRPTKGNRHFTVPIEEGYDILQKAQKTLSGPAKRVRYA- 309
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ GK+++ V + H
Sbjct: 310 MSHATGKIEV-----VSVTHDQVVFRRHR 333
>gi|262193506|ref|YP_003264715.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
gi|262076853|gb|ACY12822.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
Length = 473
Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 93/343 (27%), Positives = 166/343 (48%), Gaps = 22/343 (6%)
Query: 2 QLRHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDPI 56
Q ++ ++T L A + + D++ + ++P + +LI+ +P DP+
Sbjct: 58 QAKN-SITKPAKLLAALQEIVPQSFYDDVAAGFRKSPMSVRVSPYLLSLIDWDHPYEDPL 116
Query: 57 ARQFIPQKEEL-NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
QFIP L P+ D + + +P+ G+ HRY D+ L L CPVYCRFC R
Sbjct: 117 RTQFIPLGSRLTQDHPKLSFDSLHEQADAPVPGLTHRYVDKALFLTLDTCPVYCRFCTRS 176
Query: 116 EMVGSQKG------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
VG + A Y+ + ++ +++ +GGD L ++++ + +TL
Sbjct: 177 YAVGIDTEDVEKVSLKAREDRWDQAFRYVAARPELEDIVISGGDSYQLKARQIRHIGETL 236
Query: 170 RYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEFS 220
+ +++ +RF ++ P V PQ++ + E + L ++ K V + H NHP E +
Sbjct: 237 LGMDNIRRIRFATKGPAVMPQKLITDTEWLDALTGIVELGRKLHKEVALHTHFNHPNEIT 296
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
A+ L GI + +QSVL +G+ND E + L++ L ++PYY++ D+ G
Sbjct: 297 AITKQAMDILFERGITVRNQSVLQRGVNDTVETMQLLVKRLSYLNVQPYYVYMHDMVKGV 356
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
R TI+ G I ++ +G P +++D PGG GK I
Sbjct: 357 EDLRTTIQTGLDIEKHVRGITAGFNTPTFVVDAPGGGGKRAIH 399
>gi|257457951|ref|ZP_05623110.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580]
gi|257444664|gb|EEV19748.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580]
Length = 345
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 164/322 (50%), Gaps = 9/322 (2%)
Query: 34 HYSIALTPVIANLINPHNPND--PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
++P LI P + RQ + E + EER DP+G+ + +VH
Sbjct: 25 RLPEHVSPAFQALITSAEPAASAALRRQVLSSDSEQLVSEEERGDPLGEARYCVTPYLVH 84
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+YP+R+LL C YCR+CFRRE G LS +Y++ ++ E++ +G
Sbjct: 85 QYPNRVLLLSTGRCISYCRYCFRREFTARSSG-FLSEAQIGTVTSYLKTHPEVQEILVSG 143
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDP+ ++ +L+ LR + ++R +R P+ P+ I L + +P+++
Sbjct: 144 GDPMSGGFGEIKHLLECLRSVCSDLLIRLCTRAPVFAPELFTEAFI-MLLRSVRPLWVIA 202
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H NHP E + A++R ++GI + +Q+VLL+G+ND+P +LA L V + +KP YL
Sbjct: 203 HINHPAELGKAQRQALTRCIDSGIPVQTQTVLLRGVNDEPAVLAELFHALVCMGVKPGYL 262
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HN 326
DLA GT+HFR+ +E+ I L+ ++SGL P + +DLP G GK +
Sbjct: 263 FQTDLARGTAHFRVPLEKAASIWKELRTRLSGLSLPQFAVDLPNGGGKFPLSALLRYEDI 322
Query: 327 IKKVGNGSYCITDHHNIVHDYP 348
I + +G + ++ YP
Sbjct: 323 ISPLQDGRFSARGIDGKIYTYP 344
>gi|156050603|ref|XP_001591263.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980]
gi|154692289|gb|EDN92027.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 531
Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats.
Identities = 103/357 (28%), Positives = 176/357 (49%), Gaps = 29/357 (8%)
Query: 22 KEQIDEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDP 77
++ I+++KE +++ P I ++I+ NP +DPI RQFIP K +L P+ D
Sbjct: 164 EDFIEDVKEGIKLAPMSIRLPPHILSIIDWENPFDDPIRRQFIPMKSSKLEDHPKVELDS 223
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDT 131
+ +++ SP++G VHRY D+ L CP+YCRFC R +G V K
Sbjct: 224 LHESDDSPVEGFVHRYYDKALFLATSQCPLYCRFCTRSWSIGPDMQNVKKTTFKPQRKRW 283
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
E YI++ Q+ +++ +GGD IL+ + ++ + + L I H++ RF ++ V P R
Sbjct: 284 EDIFTYIEDTPQLQDIVVSGGDCYILTAENIRLIGERLISIPHIKRFRFATKGLAVSPAR 343
Query: 192 INPE----------LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
I + L K+AGK + I H NHP E + + A+ RL + + +Q+
Sbjct: 344 ILDDSDGWAAEMIRLSALAKKAGKSMAIHTHFNHPREMTWVSRMALQRLHENNVTVRNQT 403
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDD ++NL++T + I PYY++ D+ R + ++ ++ I
Sbjct: 404 VLLKGVNDDVATMSNLIKTVADNNIIPYYVYQADMVQYVEDLRTPLSTILQLERHIRGSI 463
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNI--------KKVGNGSYCITDHHNIVHDYPPK 350
G P +++DLPGG GK ++ + + N V++Y
Sbjct: 464 GGFVTPNFVVDLPGGGGK-RLAASYDSYDPITGRSTFTAPAVTGKNKENRVYEYWDP 519
>gi|171680131|ref|XP_001905011.1| hypothetical protein [Podospora anserina S mat+]
gi|170939692|emb|CAP64918.1| unnamed protein product [Podospora anserina S mat+]
Length = 491
Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats.
Identities = 104/346 (30%), Positives = 170/346 (49%), Gaps = 27/346 (7%)
Query: 31 ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEEL-NILPEEREDPIGDNNHSPLKG 88
+ +I +TP I + +N NP +DPI RQF+P K L P+ D + + SP+KG
Sbjct: 141 AAATMAIRMTPYILSRVNWENPRHDPIIRQFLPLKSVLIPDHPKLALDSLHEEADSPVKG 200
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKS 142
+VHRY D+ L VCP YC FC R VG+ TV + + E A AYI+
Sbjct: 201 LVHRYSDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIENTP 260
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQC 199
+ +++ +GGD L +L+ + L + +++ RF S+ V P RI E +
Sbjct: 261 ALQDIVVSGGDSYYLQPDQLRMIGDRLIGMPNIKRFRFASKGLAVAPSRILDESDGWVNA 320
Query: 200 L-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L K+AGK V H NHP E S + A +L G+++ +Q+VLL+G+NDD +
Sbjct: 321 LIDISNKAKKAGKAVAWHTHFNHPNEISWISKDASQKLFEEGVMVRNQTVLLRGVNDDVD 380
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
++ L+R + ++ PYY++ D+ H R ++ + A ++ I+G P +++D
Sbjct: 381 TMSKLIRDLADNKVFPYYVYQCDMVERVEHLRTPLQTILDLEARIRGSIAGFMMPQFVVD 440
Query: 313 LPGGYGKVKIDTHN--------IKKVGNGSYCITDHHNIVHDYPPK 350
LP G GK ++ + + D N V++Y
Sbjct: 441 LPAGGGK-RLACSYESYDPKTGLSTYMAPAVTGRDKENKVYEYYDP 485
>gi|124431233|gb|ABN11266.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis]
Length = 223
Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HRYPDR+LL + + CP+YCR C R+ VG T+ + + YI+ Q+ +V+
Sbjct: 1 THRYPDRVLLLVSNTCPMYCRHCTRKRRVG-DNDTIPNKSAILQGIDYIRNTPQVRDVLL 59
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDP +LS L +L LR I HV+I+R +R P+V P RI PEL LK+ KPV++
Sbjct: 60 SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NHP E ++ A A+ LA+AGI L +Q+VLL GIND P I+ L+ R++PY
Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
YL+ DL+ G SHFR + +G +I+ SL SG C P Y++D P
Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223
>gi|54293293|ref|YP_125708.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens]
gi|53753125|emb|CAH14572.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens]
Length = 326
Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats.
Identities = 106/321 (33%), Positives = 162/321 (50%), Gaps = 5/321 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
++ + TS DL + + + + + + + A + NP DP+ Q +
Sbjct: 10 KILAQGFTSTTDLLDFLELPRSEGNLF--AEKQFPSRIPLGFAKRMQKGNPKDPLLLQVL 67
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
+++EL + DP+ +NN + +KG++H+Y R+LL L VC V CR+CFRR
Sbjct: 68 AKEDELTEADDYVIDPLSENN-TLIKGLLHKYRGRVLLTLTGVCAVNCRYCFRRHFPYQA 126
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + AYI I EVI +GGDPL+ ++ L+++L++L I H+ LR H
Sbjct: 127 N--NPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLRIH 184
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+RI+ L+ L I IH NHP E E + A S L A LL+QS
Sbjct: 185 TRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDESVLRACSDLKKAACYLLNQS 244
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GINDD IL+ L + I PYYLH D G++HF + + + I L+ +
Sbjct: 245 VLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRARSIYHQLQSLV 304
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P + PG K +
Sbjct: 305 PGYLLPRLAREEPGRSSKTLL 325
>gi|238502959|ref|XP_002382713.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357]
gi|220691523|gb|EED47871.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357]
Length = 593
Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 105/342 (30%), Positives = 164/342 (47%), Gaps = 14/342 (4%)
Query: 22 KEQIDEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDP 77
E I ++ +A+ TP I +LIN +DPI RQFIP P+ + D
Sbjct: 200 AEFIADVATGMKKAPMAVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDS 259
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDT 131
+ + + SP+KG+VHRYPD++L VCPVYCRFC R VG Q TV K
Sbjct: 260 LHETHDSPVKGLVHRYPDKVLFLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYW 319
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
E YI ++ +V+ +GGD L +L+++ TL I H++ +RF S+ V P R
Sbjct: 320 EPMFEYIARTPEVTDVVVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSR 379
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
I + GK + + H NHP E S A +L + + + +Q+VLL +N++
Sbjct: 380 ILDPSDEW-TRKGKNIALHTHFNHPQEISWITEHAAQKLFHNAVTVRNQTVLLNKVNNNV 438
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
+ L+R + I+PYY++ D+ G R + + I + ++ I+G P +++
Sbjct: 439 PTMKRLIRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVV 498
Query: 312 DLPGGYGKVKIDT--HNIKKVGNGSYCITDHHNIV-HDYPPK 350
DLPGG GK T + + G + H Y
Sbjct: 499 DLPGGGGKRLASTFENYDTRTGVSRFLAPGVKGNTVHQYYDP 540
>gi|148358501|ref|YP_001249708.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby]
gi|296105850|ref|YP_003617550.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy]
gi|148280274|gb|ABQ54362.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby]
gi|295647751|gb|ADG23598.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy]
Length = 326
Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 104/321 (32%), Positives = 163/321 (50%), Gaps = 5/321 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
++ + TS DL + + + + + + + A + NP DP+ Q +
Sbjct: 10 KILAQGFTSTADLLDFLELPRSEGNLF--AEKQFPSRIPLGFAERMQKGNPKDPLLLQVL 67
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
+++EL + + DP+ + +++ +KG++H+Y R+LL L VC V CR+CFRR
Sbjct: 68 AKEDELTVADDYVIDPLSE-SNTLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPYQA 126
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + AYI I EVI +GGDPL+ ++ L+++L++L I HV LR H
Sbjct: 127 N--NPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHVHTLRIH 184
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+RI+ L+ L I +H NHP E E + A S L A LL+QS
Sbjct: 185 TRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKATCYLLNQS 244
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+NDD IL+ L + I PYYLH D G++HF + + Q I L+ +
Sbjct: 245 VLLAGVNDDAVILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQSLV 304
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P + PG K +
Sbjct: 305 PGYLLPRLAREEPGRSSKTLL 325
>gi|124431231|gb|ABN11265.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis]
Length = 223
Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HRYPDR+LL + + CP+YCR C + VG K T+ + + YI+ Q+ +V+
Sbjct: 1 THRYPDRVLLLVSNTCPMYCRHCTSKRCVG-DKDTIPNKSAILQGIDYIRNTPQVRDVLL 59
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDP +LS L +L LR I HV+I+R +R P+V P RI PEL LK+ KPV++
Sbjct: 60 SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NHP E ++ A A+ LA+AGI L +Q+VLL GIND P I+ L+ R++PY
Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
YL+ DL+ G SHFR + +G +I+ SL SG C P Y++D P
Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223
>gi|54296337|ref|YP_122706.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris]
gi|53750122|emb|CAH11514.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris]
Length = 326
Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 105/321 (32%), Positives = 163/321 (50%), Gaps = 5/321 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
++ + TS DL + + + + + + + A + NP DP+ Q +
Sbjct: 10 KILAQGFTSTTDLLDFLELPRSEGNLF--AEKQFPSRIPLGFAKRMQKGNPKDPLLLQVL 67
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
+++EL + DP+ + +++ +KG++H+Y R+LL L VC V CR+CFRR
Sbjct: 68 AKEDELTEADDYVIDPLSE-SNTLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPYQA 126
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + AYI I EVI +GGDPL+ ++ L+++L++L I H+ LR H
Sbjct: 127 N--NPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLRIH 184
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+RI+ L+ L I +H NHP E E + A S L A LL+QS
Sbjct: 185 TRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKAACYLLNQS 244
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GINDD IL+ L T + I PYYLH D G++HF + + Q I L+ +
Sbjct: 245 VLLAGINDDAGILSKLSHTLFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQSLV 304
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P + PG K +
Sbjct: 305 PGYLLPRLAREEPGRSSKTLL 325
>gi|307609109|emb|CBW98551.1| hypothetical protein LPW_03791 [Legionella pneumophila 130b]
Length = 326
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 105/321 (32%), Positives = 162/321 (50%), Gaps = 5/321 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
++ + TS DL + + + + + + + A + NP DP+ Q +
Sbjct: 10 KILAQGFTSTTDLLDFLELPRSEGNLF--AEKQFPSRIPLGFAKRMQKGNPKDPLLLQVL 67
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
+++EL + DP+ + +++ +KG++H+Y R+LL L VC V CR+CFRR
Sbjct: 68 AKEDELTEADDYVIDPLSE-SNTLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPYQA 126
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + AYI I EVI +GGDPL+ ++ L+++L++L I H+ LR H
Sbjct: 127 N--NPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLRIH 184
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+RI+ L+ L I IH NHP E E + A S L A LL+QS
Sbjct: 185 TRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDESVLQACSDLKKAACYLLNQS 244
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GINDD IL+ L + I PYYLH D G++HF + + Q I L+ +
Sbjct: 245 VLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQSLV 304
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P + PG K +
Sbjct: 305 PGYLLPRLAREEPGRSSKTLL 325
>gi|56477547|ref|YP_159136.1| hypothetical protein ebA3745 [Aromatoleum aromaticum EbN1]
gi|56313590|emb|CAI08235.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 462
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 93/393 (23%), Positives = 165/393 (41%), Gaps = 50/393 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
+ T + + + Q E+K +S+ + + + LI+ N P DP+ +
Sbjct: 24 FKVYTQRDFDQIVPLAKLSEAQRFEMKVVSSVLPFRVNQYVIDELIDWDNIPADPMFQLT 83
Query: 61 IPQK--------------------------------EELNILPEERED-PIGDNNH-SPL 86
PQ+ ELN P ++ + + + H + L
Sbjct: 84 FPQRGMLAPEHFDRIATLLEHGADKKDVDAAVDAVRHELNPHPADQMEMNMPRDEHGNRL 143
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+GI H+Y + +L C YC FCFR K ++S + E AY++ ++
Sbjct: 144 EGIQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKELRIASSEAETLHAYLRHHCEV 203
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRIN--------P 194
+++FTGGDP+++ + L+ L+ L H+Q +R ++ P R
Sbjct: 204 TDLLFTGGDPMVMKTRHLRDYLEPLLKPEFDHIQTIRIGTKALTFWPHRFLGADDADELI 263
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L++ L EAGK V + H NH E +E AA+ RL AG+++ Q L+ +NDDP++
Sbjct: 264 ALLERLTEAGKHVALMTHFNHWKELDTEATQAAVRRLRKAGVVIRGQGPLIAHLNDDPDV 323
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + +T V L I PYY+ ++F + + +I +++SGL + +
Sbjct: 324 WARMWKTQVRLGILPYYMFVERDTGARNYFEVPLVRAWEIYRDAMQQVSGLGRTARGPSM 383
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GKV+I G + + D
Sbjct: 384 SASPGKVEIQGVTEVA-GEKVFVLRFIQGRNPD 415
>gi|325475292|gb|EGC78477.1| hypothetical protein HMPREF9353_00492 [Treponema denticola F0402]
Length = 338
Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats.
Identities = 107/340 (31%), Positives = 170/340 (50%), Gaps = 14/340 (4%)
Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND--PIARQFIPQKEELNILPE 72
N + + ++ + ++ LI P D + Q P E +
Sbjct: 4 KNWREFSAAETADFEQ-----PVLISSAFQKLIEEAEPEDSKALRLQVEPSACEKTVCSY 58
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E DP+G+ + +VH+Y +R+LL C YCR+CFRR + + + + + +
Sbjct: 59 ETADPLGEQKYCITPYLVHQYENRVLLITTGKCLSYCRYCFRRGLTSRSQ-SYIGDGELK 117
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
YI++ Q+ E++ +GGDPL K+L+KVL LR IK ++R +R PI P+
Sbjct: 118 EVTDYIKKMPQVTEILVSGGDPLSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELF 177
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
EL+ LK+ KP+++ H NHP E E A++ AGI + SQ+VLLKG+ND+ +
Sbjct: 178 TEELLHLLKKT-KPLWLIPHINHPAELGAEQTNALNACIEAGIPIQSQTVLLKGVNDNEK 236
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
L L + IKP YL D AAGTSHFR+ ++E + + K+SGL +P + D
Sbjct: 237 TLIKLFHKLTCMGIKPGYLFQLDPAAGTSHFRVPLKEALDLWERAEPKLSGLSRPQFAAD 296
Query: 313 LPGGYGKVKIDT-----HNIKKVGNGSYCITDHHNIVHDY 347
LPGG GK + I++ + S+ ++H Y
Sbjct: 297 LPGGGGKFSLSALIYSKKIIEQKEDSSFSALGADGVIHKY 336
>gi|152990665|ref|YP_001356387.1| hypothetical protein NIS_0919 [Nitratiruptor sp. SB155-2]
gi|151422526|dbj|BAF70030.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 425
Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats.
Identities = 88/386 (22%), Positives = 154/386 (39%), Gaps = 49/386 (12%)
Query: 1 MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIA 57
M+ R S + + + E I+ I+ + + + + + LI+ N NDPI
Sbjct: 1 MEYRAYNAKSFKKIPQIQKYLSHEDIENIEIAALVFPFKVNNYLIDKLIDWENYQNDPIF 60
Query: 58 RQFIPQKEEL-------------------------------NILPEEREDPIGDNNHSPL 86
R P K+ L N P +++ + N L
Sbjct: 61 RLVFPHKDMLLEQDFERLKALYHKGDQKALSETVYEIRMRMNPHPADQKSNVPTINDKEL 120
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G H+Y + IL C YC FCFR + K+ + + YI+ I
Sbjct: 121 TGSQHKYKETILFFPKQGQTCHAYCSFCFRWPQFTGMNELKFAMKEVDLLIEYIKAHPTI 180
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
++IFTGGDPLI+S K L+ ++ + I H+Q +RF ++ P R +
Sbjct: 181 TDLIFTGGDPLIMSTKLLRSYIEPILKADIPHLQNIRFGTKTLGFWPYRFLTDSDADDLL 240
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + + E G + H NH E ++E A+ R+ G I+ +Q+ +L+ IND E+
Sbjct: 241 KLFEEIVEHGYHLAFMAHFNHYRELQTDEVEKAVKRIQQTGAIIRTQAPILRHINDSSEV 300
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+ R V + + PYY+ +F + + E KI +SGL + +
Sbjct: 301 WEKMWRKQVHMGMVPYYMFIARDTGAQHYFGVPLVEAWKIFKDAISNVSGLARTVRGPSM 360
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITD 339
GK+ + + ++ + +
Sbjct: 361 SAAPGKIAV--SGVSEINKEKVIVLN 384
>gi|30249230|ref|NP_841300.1| hypothetical protein NE1247 [Nitrosomonas europaea ATCC 19718]
gi|30180549|emb|CAD85158.1| DUF160 [Nitrosomonas europaea ATCC 19718]
Length = 452
Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats.
Identities = 92/393 (23%), Positives = 162/393 (41%), Gaps = 49/393 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + KEQ E+ ++N + + + LI+ +N P DP+ +
Sbjct: 20 RFQVYTERQLDKIRPLERFTKEQRFEMHVVANVLPFRVNQYVIDELIDWNNIPADPVFQL 79
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHS-------PL 86
PQ+ L ER P G + PL
Sbjct: 80 TFPQRNMLEPEDFERMAEALRRDAQRSEIQAIAVDIRSKLNPHPAGQQEMNVPVFHGEPL 139
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G H+Y + +L VC YC FCFR K +S + Y+ +
Sbjct: 140 PGTQHKYRETVLFFPSQGQVCHSYCTFCFRWAQFIGDKELRFASNEAGNLHKYLAGHKDV 199
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQR-INPE------ 195
+++ TGGDP+++ L+ L+ + ++HVQ +R ++ PQR + E
Sbjct: 200 TDLLMTGGDPMVMKTHHLKAYLEAMLRPALEHVQNIRIGTKSLTFWPQRYVTDEDAHELL 259
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L++ L +AGK V + H NH E + A+ R+ AG+++ +Q+ +++ INDDP +
Sbjct: 260 ALLERLVKAGKHVALMAHFNHWREMDTPIVREAVRRIRAAGVVIRAQAPIVRNINDDPAV 319
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + RT V + I PYY+ +F + +E +I +++SGL + +
Sbjct: 320 WAKMWRTQVGMGIIPYYMFVERDTGAKRYFEVPLERTYQIYREAIQQVSGLARTVRGPSM 379
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
G GKV+I ++ G + + D
Sbjct: 380 SAGPGKVEIQGI-VELNGEKIFILRFIQGRNPD 411
>gi|196234182|ref|ZP_03133014.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus
Ellin428]
gi|196221741|gb|EDY16279.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus
Ellin428]
Length = 456
Score = 281 bits (720), Expect = 9e-74, Method: Composition-based stats.
Identities = 99/374 (26%), Positives = 168/374 (44%), Gaps = 25/374 (6%)
Query: 1 MQLRHKTLTSAQDLYNANL-IKKE-QIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55
Q RH T+T+ + L + E ++++ +H + ++P + LI+ +P +DP
Sbjct: 55 FQNRH-TVTNPRQLKETLGALAPEGFYEDLQAALDHAPMALRISPYLLGLIDWRDPLHDP 113
Query: 56 IARQFIPQKEELN-ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
I QF+P + + P + D + + SP+ G+ HRYPD+ L CPVYCRFC R
Sbjct: 114 IRTQFLPLRSQQQPDHPLLQLDSLHEQEDSPVPGLTHRYPDKALFLPQLSCPVYCRFCTR 173
Query: 115 REMVGSQKGT------VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
VG+ S E A AYI + + +++ +GGD L LQ + +
Sbjct: 174 SYAVGNDTPEVEKLALTTSLARWEQAFAYIASQPDLEDIVISGGDSYNLKADHLQLIGER 233
Query: 169 LRYIKHVQILRFHSRVPIVDPQRI------NPELIQCL---KEAGKPVYIAIHANHPYEF 219
L + +++ +R+ ++ V PQ+I L + + K V + H NHP E
Sbjct: 234 LLKMPNIRRIRYATKGLCVMPQKILSDHAWTDALTRVAELGRSLHKDVVVHTHFNHPAEI 293
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ A++ L GI + Q+VL + +NDDP + L+R + + PYY++ D+ G
Sbjct: 294 TSITQDAMNVLVERGIHVRCQTVLQRTVNDDPATMTQLVRRLSYVNVHPYYVYMHDMVPG 353
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
R + QK+ ++ +G P ++LD PGG GK + + G T
Sbjct: 354 VEDLRTPLATAQKLEKYVRGATAGFNTPAFVLDAPGGGGKRDVHSPERYDRATGISVFTS 413
Query: 340 HH---NIVHDYPPK 350
Y
Sbjct: 414 PSVKPGKQFLYFDP 427
>gi|108759631|ref|YP_634392.1| hypothetical protein MXAN_6263 [Myxococcus xanthus DK 1622]
gi|108463511|gb|ABF88696.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 442
Score = 281 bits (720), Expect = 9e-74, Method: Composition-based stats.
Identities = 84/408 (20%), Positives = 157/408 (38%), Gaps = 59/408 (14%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R T +L + ++ ++ +++ + + LI+ P DPI R
Sbjct: 16 RYRAYTTRHLDELTTRAGLSADERLAVQAVAHVLPFRTNSYVVDELIDWAAAPADPIYRL 75
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDN--------NHSP 85
PQ + L R P G N P
Sbjct: 76 VFPQADMLPTEDVARMVDLLSSGASPLELNAAANEIRARLNPHPAGQMQLNVPKLANEEP 135
Query: 86 LKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ G+ H+Y + +L+ C YC +CFR +S++ E + YI+ +
Sbjct: 136 VPGLQHKYKETVLIFPKQGQTCHAYCTYCFRWAQFVGDADLKFASREIEPLVNYIRAHPE 195
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195
+ V+FTGGDP+I++ L K ++ L I+H++ +R ++ PQR +
Sbjct: 196 VTNVLFTGGDPMIMTEAVLAKYIEPLLDIEHLEAIRIGTKALAYWPQRFVTDSDADDILR 255
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + +GK + H +HP E E A+ R+ G ++ +Q+ L++ IND P
Sbjct: 256 LFEKVVASGKSLAFMAHFSHPNEMVPEIVQEAVRRIRGTGAVIRTQAPLIRTINDTPGTW 315
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
++ RT + + PYY+ +F + + E I + + +SGL + +
Sbjct: 316 ESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYDIFRNAFQSVSGLARTVRGPSMS 375
Query: 315 GGYGKVKIDTHNIKKVGNGSYCI------TDHH--NIVH--DYPPKSS 352
GKV + + ++ + D Y K+S
Sbjct: 376 ATPGKVCV--DGVAEIAGEKVFVLHFIQSRDPELVGRPFFAKYDEKAS 421
>gi|52840543|ref|YP_094342.1| L-lysine 2,3-aminomutase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52627654|gb|AAU26395.1| L-lysine 2,3-aminomutase, radical SAM domain protein [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 326
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 105/321 (32%), Positives = 164/321 (51%), Gaps = 5/321 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
++ + TS DL + + + + + + + A + NP DP+ Q +
Sbjct: 10 KILAQGFTSTTDLLDFLELPRSEGNLF--AEKQFPSRIPLGFAKRMQKGNPKDPLLLQVL 67
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
+++EL+ + DP+ + +++ +KG++H+Y R+LL L VC V CR+CFRR
Sbjct: 68 AKEDELSEADDYVIDPLSE-SNTLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPYQA 126
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + AYI S I EVI +GGDPL+ ++ L+++L++L I H+ LR H
Sbjct: 127 N--NPGRRGWKEVCAYIANDSSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLRIH 184
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+RI+ L+ L I +H NHP E E + A S L A LL+QS
Sbjct: 185 TRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKAACYLLNQS 244
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL GINDD IL+ L + I PYYLH D G++HF + + Q I L+ +
Sbjct: 245 VLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLLRAQSIYHQLQSLV 304
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P + PG K +
Sbjct: 305 PGYLLPRLAREEPGRSSKTLL 325
>gi|189200174|ref|XP_001936424.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983523|gb|EDU49011.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 443
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 103/338 (30%), Positives = 171/338 (50%), Gaps = 22/338 (6%)
Query: 35 YSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHR 92
+I LTP + +L++ P +DPI +QF+P + + D + + + SP+ G+VHR
Sbjct: 30 MAIRLTPHVLSLVDWTKPLDDPIRKQFLPLRSGIIPDHKHLELDSLHEEDDSPVPGLVHR 89
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKSQIWE 146
YP R L +CPVYCRFC R VG+ TV S K E +I++ + +
Sbjct: 90 YPGRALFLATSICPVYCRFCTRSYAVGANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQD 149
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-------NPELIQC 199
++ +GGD L +++++ L I H++ +R S+ V P RI LI+
Sbjct: 150 IVVSGGDAYFLQPDHVKEIVYRLLNIPHIRRIRLASKGLAVAPGRILDDADPWTDALIEV 209
Query: 200 L---KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+E GK V + H NH E + A ++L G+I+ +QSVLLKG+N+ + L +
Sbjct: 210 SNKGREMGKQVCLHTHINHANEITWITRLAANKLFKHGVIVRNQSVLLKGVNNHKDTLLD 269
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L++T ++ I+PYY++ D+ G R ++E + L+ K+SG P +++DLPGG
Sbjct: 270 LIKTLADMNIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKELRGKLSGFMMPSFVIDLPGG 329
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNI----VHDYPPK 350
GK + T + G +Y + V+ Y
Sbjct: 330 GGKRLVSTMESYQNGEATYRAPGLPGVKGEMVYRYYDP 367
>gi|330906439|ref|XP_003295474.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1]
gi|311333210|gb|EFQ96428.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1]
Length = 526
Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 107/355 (30%), Positives = 177/355 (49%), Gaps = 30/355 (8%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQF 60
QLR + + D +E + IK +I LTP + +L++ P +DPI +QF
Sbjct: 90 QLRR--IRTKDDFI------EEAVAAIKLA--PMAIRLTPHVLSLVDWTKPLDDPIRKQF 139
Query: 61 IPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P + + D + + + SP+ G+VHRYP R L +CPVYCRFC R VG
Sbjct: 140 LPLRSGIIPDHKHLELDSLHEEDDSPVPGLVHRYPGRALFLATSICPVYCRFCTRSYAVG 199
Query: 120 SQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
+ TV S K E +I++ + +++ +GGD L +++++ L I
Sbjct: 200 ANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQDIVVSGGDAYFLQPDHVKEIVYRLLNIP 259
Query: 174 HVQILRFHSRVPIVDPQRI-------NPELIQCL---KEAGKPVYIAIHANHPYEFSEEA 223
H++ +R S+ V P RI LI+ +E GK V + H NH E +
Sbjct: 260 HIRRIRLASKGLAVAPGRILDDADPWTDALIEVSNKGREMGKQVCLHTHINHANEITWIT 319
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A ++L G+I+ +QSVLLKG+N+ + L +L++T ++ I+PYY++ D+ G
Sbjct: 320 RLAANKLFKHGVIVRNQSVLLKGVNNHKDTLLDLIKTLADINIQPYYVYQCDMVQGIEDL 379
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
R ++E + L+ K+SG P +++DLPGG GK + ++ NG
Sbjct: 380 RTPLQEIIDLDKDLRGKLSGFMMPSFVIDLPGGGGKRLV--STVESYKNGEATYR 432
>gi|118602356|ref|YP_903571.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567295|gb|ABL02100.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 315
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 155/296 (52%), Gaps = 9/296 (3%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
+I+ K+ + I + A LI+ N NDP+ RQ I + L+ P+ + +
Sbjct: 25 KIEAFKD--QDFPIKIPLEFAQLIDKSNKNDPLLRQVI-SSKVLSKSENFSLLPLEEEKY 81
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
SP+ G++H+YP+R+LL VC ++C++CFR+ S+ + + YI +
Sbjct: 82 SPVAGLIHKYPNRVLLITSQVCAIHCQYCFRQNFNYSEHDAI---SNWNEVQNYIVNDVK 138
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I EVI +GGD L LS +L ++ + I H++ LR H+R +V P RI +L L ++
Sbjct: 139 INEVILSGGDLLSLSDDKLSILIDNIANIAHIKTLRIHTRSIVVMPSRITDKLADTLNQS 198
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
V I +H NH E S + I++L +G+ LL+QSVLLKG+ND +IL L +
Sbjct: 199 RLNVVIVLHTNHAQELSVKFAQKITKL--SGVTLLNQSVLLKGVNDSIKILTELCLKLFD 256
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
L I PYYLH D G F + ++ ++ LK +SG P + D G + K
Sbjct: 257 LGILPYYLHMLDKVQGAQDFLVKDDDAIQLHQQLKNNLSGYLVPKLVRDN-GNHSK 311
>gi|163756014|ref|ZP_02163131.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1]
gi|161324185|gb|EDP95517.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1]
Length = 418
Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats.
Identities = 104/392 (26%), Positives = 165/392 (42%), Gaps = 51/392 (13%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIA 57
MQ + TL + + + + +EQ++EIK +S+ Y + NLI+ +N PNDPI
Sbjct: 1 MQKFKSYTLNKLEKIPQLSGLSEEQMEEIKIVSSIYPFKTNNYVLENLIDWNNIPNDPIF 60
Query: 58 RQFIPQKEELNILPEER-------------------------EDPIGDNNHS-------P 85
R P KE L E+ P G +
Sbjct: 61 RLNFPHKEMLIPEHFEQLKRVRATGTKEELKEVIYNIRMKLNPHPAGQKELNGAFLEEKK 120
Query: 86 LKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L+GI H+Y D +L C YC FCFR + + SK+ + L Y+ E Q
Sbjct: 121 LEGIQHKYKDILLFFPSQSQTCHAYCTFCFRWPQFINDLDFKIQSKEIDPLLKYLSENPQ 180
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----PELIQ 198
I EV+FTGGDP+I++ + L ++ L + ++ +R ++ P + ++
Sbjct: 181 ITEVLFTGGDPMIMNSRVLDSYIEPLLKVDSIKTIRIGTKALSYWPYKFTTDEDAEGMLN 240
Query: 199 CLKE---AGKPVYIAIHANHPYEFSEEA-IAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L++ AGK + H NHP E AI +L + G ++ +QS LL+ IN+D +
Sbjct: 241 VLRKITKAGKHLGFMAHFNHPKELEPPVVKEAIDKLRSIGAVIRTQSPLLRFINNDAKTW 300
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+ V+L PYY+ P +F T+E K+ SGL +
Sbjct: 301 TTMWEKQVQLGCIPYYMFLPRDTGAQHYFAETLENAHKLYTEAIRNCSGLASTAKGPVMS 360
Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+GKV+I V N SY + + H
Sbjct: 361 MTHGKVEI-----LGVKNNSYTLRYVKHRDHS 387
>gi|317148225|ref|XP_001822598.2| L-lysine 2,3-aminomutase [Aspergillus oryzae RIB40]
Length = 453
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 104/318 (32%), Positives = 162/318 (50%), Gaps = 20/318 (6%)
Query: 22 KEQIDEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDP 77
E I ++ +A+ TP I +LIN +DPI RQFIP P+ + D
Sbjct: 91 AEFIADVATGMKKAPMAVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDS 150
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDT 131
+ + + SP+KG+VHRYPD++L VCPVYCRFC R VG Q TV K
Sbjct: 151 LHETHDSPVKGLVHRYPDKVLFLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYW 210
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
E YI ++ +V+ +GGD L +L+++ TL I H++ +RF S+ V P R
Sbjct: 211 EPMFEYIARTPEVTDVVVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSR 270
Query: 192 I---NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
I + E + L +E GK + + H NHP E S A +L + + + +Q+
Sbjct: 271 ILDPSDEWTRVLIEISNRGREKGKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQT 330
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL +N++ + L+R + I+PYY++ D+ G R + + I + ++ I
Sbjct: 331 VLLNKVNNNVPTMKRLIRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTI 390
Query: 302 SGLCQPFYILDLPGGYGK 319
+G P +++DLPGG GK
Sbjct: 391 AGFMTPSFVVDLPGGGGK 408
>gi|46445864|ref|YP_007229.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399505|emb|CAF22954.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 347
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 103/321 (32%), Positives = 165/321 (51%), Gaps = 6/321 (1%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++ K T+ + L + + EQ ++ + ++I + +A + + DP+ +QF+P
Sbjct: 30 IQRKNFTNLKILADFLALNFEQRKQLLD-KPTFAINVPYRLAQKMTKGSLEDPLVKQFLP 88
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
K E +DP+GD ++H+Y R+LL C ++CR+CFR+
Sbjct: 89 FKSEFENHNLFVQDPVGDEQCRRTAQLLHKYRGRVLLVCTSACAMHCRYCFRQNFSYQSH 148
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ L I++ S I EVI +GGDPL LS+ L K+ + L I H++ +RFH+
Sbjct: 149 DKTFLKE-----LDLIRQDSSIHEVILSGGDPLSLSNDILAKLFEELNGISHLKRIRFHT 203
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R PI P+RI+ + ++ K ++ IH NHP E E+ + L G +LL+QSV
Sbjct: 204 RFPIGIPERIDKGFLNIIENCPKQIFFVIHCNHPLELDEDIFERLKALHLRGCVLLNQSV 263
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+ND E+L L + I PYYLH D G SHF L +EG ++ L +++S
Sbjct: 264 LLKGVNDRIEVLEELCELLSDHGIIPYYLHQLDRVKGASHFELGEKEGAALIQELSKRLS 323
Query: 303 GLCQPFYILDLPGGYGKVKID 323
G P Y+ ++ G K I
Sbjct: 324 GYAIPRYVREIAGEAHKTPIQ 344
>gi|327398266|ref|YP_004339135.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411]
gi|327180895|gb|AEA33076.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411]
Length = 304
Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats.
Identities = 111/292 (38%), Positives = 168/292 (57%), Gaps = 8/292 (2%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
I QF K EL +DP+G+ HS KG++HRY DR++L + + C YCRFCFR+
Sbjct: 18 IKSQFCFSKGELF--LNGNKDPLGEKKHSKAKGLIHRYTDRVVLTVTNKCFAYCRFCFRK 75
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
S +G E ++ Y+++ + EV+ +GGDP LS+K+L ++L +R IKH+
Sbjct: 76 NNWQSFEGFS-----LEESVNYLKKTKNVREVLISGGDPFFLSNKKLAEILTAIRSIKHI 130
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
+R SRV P RI+ + + LK KP++IA H NHP E ++E + L ++GI
Sbjct: 131 STIRIGSRVLSSLPIRIDNQTAEMLKLF-KPIWIAAHINHPDEITDEFKKSARLLLDSGI 189
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
++SQ+VLLK IND+ L L + V++ IKPYYL D A G FR++I++ ++
Sbjct: 190 PIVSQTVLLKNINDNETTLKKLFCSLVDIGIKPYYLFGCDQAVGNGIFRVSIDKALSLME 249
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
L+ KISGLC P + DLP GYGKV ++ + I K + + +Y
Sbjct: 250 KLRGKISGLCMPTFSFDLPSGYGKVTLEPNRIIKRNGNIFTFKNFEGKEINY 301
>gi|194333979|ref|YP_002015839.1| radical SAM domain-containing protein [Prosthecochloris aestuarii
DSM 271]
gi|194311797|gb|ACF46192.1| radical SAM domain protein [Prosthecochloris aestuarii DSM 271]
Length = 433
Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats.
Identities = 86/383 (22%), Positives = 162/383 (42%), Gaps = 48/383 (12%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIAR 58
++ R T + +L + EQI IK ++ Y + +A NLI+ P+DP+ R
Sbjct: 2 LKYRSYTAANIHELPQYRALSDEQIHTIKTVATVYPFRINNHVAENLIDWSAVPDDPVFR 61
Query: 59 QFIPQKEELNILPE--------------------------EREDPIGDNNHSPL------ 86
PQ L + +P G +
Sbjct: 62 LSFPQAGMLQDKEFNDLSGLIRSGKDKTIIQRTARQIMLRQNPNPAGQMELNTPQLDGIA 121
Query: 87 -KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G+ H+Y + +L VC YC +CFR ++ D ++Y++E +
Sbjct: 122 LHGMQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLDNLKFANHDVSRLISYLKEHPE 181
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195
+ ++IFTGGDP+++S + L+K ++ L I ++ +R ++ P R +
Sbjct: 182 VKDIIFTGGDPMVMSSQLLRKYIEPLLKIPAIRTIRIGTKSLSWWPYRFTTDTDADDILR 241
Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + AGK + I H +HP E + A+ AI+R+ + G ++ SQS +++ IND+ +
Sbjct: 242 LFEKIVHAGKHLAIMAHISHPGEIENPAALDAITRIRSTGAVIRSQSPIVRYINDNAQTW 301
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+ + + L I PYY+ +F + + E I + K+SGL + +
Sbjct: 302 EAMWQKQLHLGIIPYYMFLERDTGPKHYFDVPLHEALNIFNTAYRKMSGLGRTVRGPSMS 361
Query: 315 GGYGKVKIDTHNIKKVGNGSYCI 337
GK+ + +I ++ +
Sbjct: 362 CSPGKIIV--EDITEIDEKKVFV 382
>gi|270157927|ref|ZP_06186584.1| KamA family protein [Legionella longbeachae D-4968]
gi|289163802|ref|YP_003453940.1| lysine aminomutase [Legionella longbeachae NSW150]
gi|269989952|gb|EEZ96206.1| KamA family protein [Legionella longbeachae D-4968]
gi|288856975|emb|CBJ10789.1| putative lysine aminomutase [Legionella longbeachae NSW150]
Length = 327
Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats.
Identities = 94/317 (29%), Positives = 152/317 (47%), Gaps = 4/317 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ TS +L + + + + A + NP+DP+ Q +
Sbjct: 14 QGFTSVTELLTYLELPLST--GNLDAEKQFPSRIPLGFAKRMQKGNPHDPLLLQVLASGY 71
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL E DP+ +++++ ++G++H+Y R+LL + VC V CR+CFRR
Sbjct: 72 ELQGSEEYSSDPLDEHSNNSVRGLLHKYHGRVLLTMTGVCAVNCRYCFRRHFPYQAN--N 129
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ YI + + I EVI +GGDPL+ S L ++++ L I H+ LR H+R+P
Sbjct: 130 PGRAGLKHICDYIAQDTSITEVILSGGDPLLASDVVLGELIEQLEQIPHLHTLRIHTRIP 189
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P+RI+ L+ LK+ I +H NH E + + L LL+Q+VLL
Sbjct: 190 VVFPERIDLNLLSLLKKVKLNKVIVLHCNHAQELDDSVRPVLHELRRIDCHLLNQTVLLA 249
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND+ +LA+L +T + PYYLH D G +HF L + I L+ + G
Sbjct: 250 GINDNAHVLADLSQTLFSFGVLPYYLHVLDKVKGAAHFDLPFNTVKGIYQQLQNLLPGYM 309
Query: 306 QPFYILDLPGGYGKVKI 322
P + + PG K +
Sbjct: 310 LPRLVREEPGKSSKTLL 326
>gi|42525588|ref|NP_970686.1| hypothetical protein TDE0069 [Treponema denticola ATCC 35405]
gi|41815599|gb|AAS10567.1| conserved hypothetical protein TIGR00238 [Treponema denticola ATCC
35405]
Length = 338
Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats.
Identities = 107/340 (31%), Positives = 173/340 (50%), Gaps = 14/340 (4%)
Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND--PIARQFIPQKEELNILPE 72
N + + ++ + ++ LI P D + Q P E +
Sbjct: 4 KNWREFSAAETADFEQ-----PVLISSAFQKLIEESEPEDSNALLLQVEPSACEKTVCSY 58
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E DP+G+ + +VH+Y +R+LL C YCR+CFRR + + + + + +
Sbjct: 59 ETADPLGEQKYCITPYLVHQYENRVLLITTGKCLSYCRYCFRRGLTARSQ-SYIGDGELK 117
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
A YI++ Q+ E++ +GGDPL K+L+KVL LR IK ++R +R PI P+
Sbjct: 118 AVTDYIKKMPQVTEILVSGGDPLSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELF 177
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
EL+ LK+ KP+++ H NHP E +E A++ AGI + SQ+VLLKG+ND+ +
Sbjct: 178 TEELLHLLKKT-KPLWLIPHINHPAELGKEQTNALNACIEAGIPIQSQTVLLKGVNDNEK 236
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
L L + IKP YL D AAGTSHFR+ ++E + ++ K+SGL +P + +D
Sbjct: 237 TLIKLFHKLTCMGIKPGYLFQLDPAAGTSHFRVPLKEALDLWERVEPKLSGLSRPQFAVD 296
Query: 313 LPGGYGKVKIDT-----HNIKKVGNGSYCITDHHNIVHDY 347
LP G GK + I++ + S+ ++H Y
Sbjct: 297 LPEGGGKFSLSALIYSKKIIEQKEDSSFSALGADGVIHKY 336
>gi|111025433|ref|YP_707853.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
gi|110824412|gb|ABG99695.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
Length = 442
Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats.
Identities = 90/393 (22%), Positives = 166/393 (42%), Gaps = 51/393 (12%)
Query: 1 MQLRHKTLT--SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPI 56
M+ R +T DL + +++ E++ ++N + + + LI+ + P+DPI
Sbjct: 1 MKNRMRTFRGVQLADLPQLDQFTEQERHEMRVVANLLPFRVNNYVLDELIDWSSAPDDPI 60
Query: 57 ARQFIPQKEE--------------------------------LNILPEE-REDPIGDNNH 83
R P +E LN P RE + +
Sbjct: 61 FRMTFPAREMVPPRIYDLVSDALSNGVDRKQLQAIAQKCRQDLNPHPSGQREHNVPLLDG 120
Query: 84 SPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
P+ G+ H+Y +L+ C YC +CFR ++ + Y++
Sbjct: 121 EPVAGLQHKYRQTLLVFPSQGQTCHSYCSYCFRWAQFVGDADLKFAAPGPGRMIDYLRGH 180
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----P 194
++ +V+ TGGDPLI+S L + + L ++HV +R ++ + P R+
Sbjct: 181 REVTDVLLTGGDPLIMSTPVLARWVTPLLAPDLEHVTNIRIGTKALVQWPYRVTSGPDAD 240
Query: 195 ELIQCLKEA---GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDD 250
EL++ ++ GK V I +H +HP E +E A AA++RL +AG ++ +Q+ +++ +ND
Sbjct: 241 ELLRLIEACTAAGKSVAIMLHVSHPRELENEAATAAVARLRSAGAVVRAQAPIIRHVNDS 300
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
P+ A + R V L I+PYY +S F + + I + +SGL +
Sbjct: 301 PQAWATMWRHMVRLGIQPYYTFVERDTGASSFFEVPLARALTIYQEAQRVVSGLARTARG 360
Query: 311 LDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
+ GK+ ID + G + +
Sbjct: 361 PVMSATPGKIAIDGETVV-NGERLFVLRLLQAR 392
>gi|237654137|ref|YP_002890451.1| hypothetical protein Tmz1t_3480 [Thauera sp. MZ1T]
gi|237625384|gb|ACR02074.1| conserved hypothetical protein [Thauera sp. MZ1T]
Length = 484
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 88/395 (22%), Positives = 155/395 (39%), Gaps = 50/395 (12%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
M + T + + EQ E+K ++ + + + LI+ + P DPI +
Sbjct: 46 MSFKVFTARDLDRIPQLARLSPEQRFEMKVVAAVLPFRVNQYVIDELIDWADVPRDPIFQ 105
Query: 59 QFIPQKEELNILPEEREDPIGD----------------------------------NNHS 84
PQ+ L ER + + +
Sbjct: 106 LTFPQRGMLASEHYERIARLIEGDADKDALEAAIAEVRHALNPHPADQMQMNMPLDEHGK 165
Query: 85 PLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+ G+ H+Y + +L C YC FCFR K ++S + Y++ +
Sbjct: 166 RIDGLQHKYRETVLFFPSQGQTCHAYCSFCFRWAQFVGDKELRIASSEARVLHDYLRTHT 225
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRIN------- 193
++ +++ TGGDP+++ + L++ L+ L H+Q +R S+ P R
Sbjct: 226 EVTDLLVTGGDPMVMKTRHLREYLEPLLRPEFDHIQTIRIGSKALTFWPHRFLGAEDADD 285
Query: 194 -PELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
L++ L EAGK V + H NH E ++ A AAI R+ G ++ +Q L+ INDDP
Sbjct: 286 LMRLLRQLVEAGKHVALMAHYNHWKELETDAAHAAIRRIRATGAVIRAQGPLIAHINDDP 345
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
A L +T V L + PYY+ +F + + +I +++SGL +
Sbjct: 346 AAWARLWKTEVRLGLVPYYMFVERDTGARHYFEVPLARAWEIYQQAIQQVSGLARTARGP 405
Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ GKV+I G + + D
Sbjct: 406 SMSASPGKVEIQGVTEIA-GEKVFVLRFIQGRNPD 439
>gi|149375732|ref|ZP_01893500.1| Radical SAM domain protein [Marinobacter algicola DG893]
gi|149359857|gb|EDM48313.1| Radical SAM domain protein [Marinobacter algicola DG893]
Length = 454
Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 92/393 (23%), Positives = 158/393 (40%), Gaps = 49/393 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + +E + E+K +++ + + N LI+ + PNDP+ +
Sbjct: 20 RFKVYTDRQLDKIDVIQNLPEETLFEMKVVASVLPFRVNEYVINELIDWNKVPNDPLYQL 79
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHSPLK------ 87
PQK L ER P G + +
Sbjct: 80 VFPQKGMLKDEHYERMAKMHREGAEKKEIQAVAKEIRDELNPHPAGQMEMNMPELNGEVL 139
Query: 88 -GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR K ++S + E Y+QE +++
Sbjct: 140 DGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLKMASTEAEKLHGYLQEHTEV 199
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195
+++ TGGDP+++ K L + L+ L H+Q +R ++ P R +
Sbjct: 200 SDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L L +AGK V I H NH E + + A AI RL G + +Q L+K +ND+ +
Sbjct: 260 DLFARLVDAGKHVAIMAHYNHWQEITTDIAEEAIRRLRATGAEIRAQGPLIKHVNDNADD 319
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L V+L I PYY+ ++F + + E I +++SGL + +
Sbjct: 320 WAKLWDKEVQLGIIPYYMFVERDTGAKNYFEVPLVEAFNIYREAIKQVSGLARTARGPSM 379
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
G GKV++ G + + D
Sbjct: 380 SAGPGKVEVQGITEI-NGEKVFVLRFIQARNPD 411
>gi|56460615|ref|YP_155896.1| lysine 2,3-aminomutase related protein enzyme [Idiomarina
loihiensis L2TR]
gi|56179625|gb|AAV82347.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina
loihiensis L2TR]
Length = 448
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 94/392 (23%), Positives = 164/392 (41%), Gaps = 53/392 (13%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
+H+ L + L + + E+K ++N + + N LI+ N PNDP+ +
Sbjct: 20 YQHRQLDKIEALKK---VPDDMRFEMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLT 76
Query: 61 IPQKEELNILPEER--------------------------EDPIGDNNHS-------PLK 87
PQK+ L +R P G + PL
Sbjct: 77 FPQKDMLEPSAYQRMADLMSGKHTTNEVFDLATQLRDEMNPHPAGQMQMNVPHVDGEPLP 136
Query: 88 GIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L C YC FCFR K T +S D + Y+ + ++
Sbjct: 137 GMQHKYRETVLFFPAQGQYCHSYCTFCFRWAQFVG-KATRFNSNDADQLHRYLAQHKEVT 195
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195
+++ TGGDP+++ ++L L+ L +H++ +R ++ P R +
Sbjct: 196 DLLVTGGDPMVMRTRKLAHYLEGLLQPEFEHIKTIRIGTKSLTFWPYRFITDPDADDLLR 255
Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L++ L + GK V I H NHP E +E AI RL G+ + Q+ LLK INDDP++
Sbjct: 256 LLERLVDGGKHVSIMAHLNHPNELRTEVCQEAIRRLRATGVQIRCQAPLLKHINDDPDVW 315
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A++ V+L + PYY+ +F + +E +I +++SG+ + +
Sbjct: 316 ASMWEKQVQLGLIPYYMFVERDTGAKRYFEVPLERTWEIFQKAYQQVSGIARTVRGPSMS 375
Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
G GKV++ G + + D
Sbjct: 376 AGPGKVEVQGVTEIA-GEKVFALRFIQGRNPD 406
>gi|325279772|ref|YP_004252314.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
gi|324311581|gb|ADY32134.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
Length = 442
Score = 276 bits (705), Expect = 5e-72, Method: Composition-based stats.
Identities = 88/388 (22%), Positives = 153/388 (39%), Gaps = 48/388 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQF 60
+ LT+ +++ + KE++ I+ + + LI+ + DPI
Sbjct: 5 YQAYGLTNYRNIRQITRLNKEELQAIEVVGRVLPFKTNNYVVEELIDWERIDTDPIFTLN 64
Query: 61 IPQKE--------------------------------ELNILPEEREDPIGDNNHSPLKG 88
P++E ELN P ++ + LKG
Sbjct: 65 FPRREMLSKKHFSVVSKLLAQEVGKEEFIAAVNAVRLELNPNPAGQDHNVPMLGDIRLKG 124
Query: 89 IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
I H+Y + +L C YC FCFR + K+T+ L Y++ Q+ +
Sbjct: 125 IQHKYRETVLFFPAQGQTCHAYCSFCFRWPQFSGMNELKFAMKETDLLLKYLRLHPQVTD 184
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196
V+FTGGDP+ +S L ++ L ++H++ +R S+ P R + L
Sbjct: 185 VLFTGGDPMTMSASLLSAYIEPLLQPGLEHIRTIRIGSKALAYWPYRFISDVDAAEVLRL 244
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + GK + H NHP E + AI R+ N G + +QS LL+ IND PEI
Sbjct: 245 FEKVTATGKNLSFQAHFNHPVELSTAAVCEAIRRIRNTGAQIRTQSPLLRHINDSPEIWR 304
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ R V+L PYY+ +F + +E+ I ++SG+C+ +
Sbjct: 305 EMWRKQVDLSCIPYYMFVARDTGAKHYFEIPLEKCWDIFRKAYSQVSGICRTVRGPSMSD 364
Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GK+++ G + +
Sbjct: 365 EPGKIQLLGVAEI-KGEKVFVLRFIQGR 391
>gi|85711269|ref|ZP_01042328.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica
OS145]
gi|85694770|gb|EAQ32709.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica
OS145]
Length = 457
Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats.
Identities = 92/392 (23%), Positives = 162/392 (41%), Gaps = 53/392 (13%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
+H+ L + L + + E+K ++N + + N LI+ N PNDP+ +
Sbjct: 29 YQHRQLDKIEALKR---VPDDIRFEMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLT 85
Query: 61 IPQKEELNILPEER--------------------------EDPIGDNNHS-------PLK 87
PQK+ L+ +R P G + PL
Sbjct: 86 FPQKDMLDPSAFQRMADLMSGKHTTNEVFDLATQLRQEMNPHPAGQMQMNVPHVDGEPLP 145
Query: 88 GIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L C YC FCFR K T +S D + Y+ + ++
Sbjct: 146 GMQHKYRETVLFFPAQGQYCHSYCTFCFRWAQFVG-KATRFNSNDADQLHRYLAQHKEVT 204
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQR-INP-------E 195
+++ TGGDP+++ ++L+ L+ L H++ +R ++ P R I
Sbjct: 205 DLLVTGGDPMVMRTRKLKHYLEGLLQPEFDHIKTIRIGTKALTFWPYRFITDPDADELMR 264
Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L++ L GK V I H NH E +E AI RL G + Q+ LL+ INDDP++
Sbjct: 265 LLEKLVRGGKHVSIMAHLNHHNELRTEVCEEAIRRLRATGAQIRCQAPLLRHINDDPKVW 324
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A++ V+L + PYY+ +F + +E ++ +++SG+ + +
Sbjct: 325 ADMWEREVQLGMIPYYMFVERDTGAKRYFEVPLERTWEVFQQAYQQVSGIARTVRGPSMS 384
Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
G GKV++ G + + D
Sbjct: 385 AGPGKVEVQGVTEVA-GEKVFALRFIQGRNPD 415
>gi|83771333|dbj|BAE61465.1| unnamed protein product [Aspergillus oryzae]
Length = 464
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 108/355 (30%), Positives = 171/355 (48%), Gaps = 38/355 (10%)
Query: 2 QLRHKTLTSAQDLYNANL--IK--------------KEQIDEIKEISNHYSIAL--TPVI 43
Q+++ +L S + L N + E I ++ +A+ TP I
Sbjct: 66 QMKN-SLQSPKALLNFLAAVLPSEIRSSSTQGYVTRAEFIADVATGMKKAPMAVRLTPHI 124
Query: 44 ANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDPIGDNNHSPLKGIVHRYPDRIL-LK 100
+LIN +DPI RQFIP P+ + D + + + SP+KG+VHRYPD+
Sbjct: 125 LSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRYPDKNDSYL 184
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIWEVIFTGGDP 154
VCPVYCRFC R VG Q TV K E YI ++ +V+ +GGD
Sbjct: 185 ATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDVVVSGGDT 244
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL-------KEAG 204
L +L+++ TL I H++ +RF S+ V P RI + E + L +E G
Sbjct: 245 FFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRVLIEISNRGREKG 304
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
K + + H NHP E S A +L + + + +Q+VLL +N++ + L+R +
Sbjct: 305 KNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKRLIRKLADN 364
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
I+PYY++ D+ G R + + I + ++ I+G P +++DLPGG GK
Sbjct: 365 NIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGGGGK 419
>gi|83648059|ref|YP_436494.1| lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396]
gi|83636102|gb|ABC32069.1| Lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396]
Length = 348
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 155/315 (49%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ S Q+L + + + + + + + T + +P+DP+ Q +P E
Sbjct: 34 IKSPQELLSLLELPEALLQDALPGHAQFPVRATRDYVRRMKKGDPSDPLLLQVLPLHLEQ 93
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ DP+ + +++ KGI+ +Y R LL C ++CR+CFRR S+ S
Sbjct: 94 QEMIGYSADPLSEADYTASKGILQKYHGRALLITTSACAIHCRYCFRRHFPYSEHRQ--S 151
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ ALA + + E+I +GGDPL+L++ L ++L + + + +R H+R+PI+
Sbjct: 152 RAQWKEALATLPGDGGVSEIILSGGDPLMLNNPVLDELLTLIAELPQISKVRLHTRLPIM 211
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI+ L+ L + IHANH E A++RL ++L+Q+VLLKG+
Sbjct: 212 LPDRIDQGLLDLLSNRPFKTIMVIHANHGAELDASVEKALARLRPVVHMMLNQTVLLKGV 271
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDD LA L E + PYYLH D G +HF E ++ +L+ K+ G P
Sbjct: 272 NDDSSTLAALSERLFECGVTPYYLHQLDKVQGAAHFDCGDERLSSLMQALRAKLPGYLVP 331
Query: 308 FYILDLPGGYGKVKI 322
+ ++PG K I
Sbjct: 332 RLVREIPGAPSKTPI 346
>gi|319790052|ref|YP_004151685.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
gi|317114554|gb|ADU97044.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
Length = 343
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 104/346 (30%), Positives = 176/346 (50%), Gaps = 7/346 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +TS + L + + + + + Y + T A L + + R +P E
Sbjct: 2 RVITSLEALEGLLPLSPREREAFRAVVPVYPFSTTEYYARL---AAESFAVRRMLLPSLE 58
Query: 66 ELNILPE--EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
ELN + DP+ + + HRYPDR+L+ + CPV CRFC R+
Sbjct: 59 ELNPELQNLGEPDPLREERDRKAPCLTHRYPDRVLVVTTNYCPVLCRFCMRKRNWRRP-L 117
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+S + +A L+Y++ Q+ +V+ +GG+PL+L + L+++L L+ I+ V+++R +R
Sbjct: 118 FTISEDEVDAVLSYVRRNPQVRDVLISGGEPLLLPLELLERLLLGLKKIESVEVVRIGTR 177
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+P+V+P + + L E + V++ H NHP E + EA A+ L G+ + +Q+VL
Sbjct: 178 LPVVEPSAVLRSELLSLLERAQKVWVNTHFNHPDELTAEAAEAVKALLKCGVPVNNQTVL 237
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
LKG+ND +L L R ++++PYYL H D G HF I G K++ L+ ++S
Sbjct: 238 LKGVNDSVSVLERLFRGLQRIKVRPYYLFHCDPVEGVMHFSTPISLGLKLLEELQTRLSP 297
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
L P+Y +D PGGYGKV + +K+G Y P
Sbjct: 298 LALPYYAVDGPGGYGKVPMLPVRFEKLG-SVYRFRSFSGRYFTMPD 342
>gi|161529280|ref|YP_001583106.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus
SCM1]
gi|160340581|gb|ABX13668.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus
SCM1]
Length = 448
Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 85/390 (21%), Positives = 151/390 (38%), Gaps = 50/390 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
L+ TL++ +DL I +E+ E++ + N + LIN ++ PNDP+
Sbjct: 14 LKSYTLSNFRDLPQIQNISEEKQFEMEVVGNVLPFKANNYVVEQLINWNDIPNDPMYVLT 73
Query: 61 IPQKEELNILPE--------------------------EREDPIGDN--------NHSPL 86
PQ+ L P G + + L
Sbjct: 74 FPQRGMLKPEHYAKMENTLKNTSDKKEIANVANEIRLQLNPHPAGQMELNVPTLKDGTKL 133
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR + ++ E + Y+ E +I
Sbjct: 134 YGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMQEGEQLVQYVSEHPEI 193
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI-----NPELI 197
+V+FTGGDP+I+ K K + L + +++ +R ++ P + + E++
Sbjct: 194 SDVLFTGGDPMIMKAKMFSKYVDALIEAKLPNLKTIRIGTKALSYWPYKFLTDSDSQEML 253
Query: 198 QCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
Q ++ +G + H NH E + +AI + G + +QS LL INDD E+
Sbjct: 254 QVFQKITDSGLHLAFMAHFNHLNELSTNAVKSAIKEVRKTGAQIRTQSPLLAHINDDAEM 313
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
AN+ V+L PYY+ +F + + + +I + +SGL + +
Sbjct: 314 WANMWTKQVQLGCIPYYMFVVRDTGAQHYFGVPLVKAYEIFSQAYSTVSGLGRTVRGPSM 373
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GKV++ G +
Sbjct: 374 SATPGKVQVVGTTQI-NGEKLLILRFLQGR 402
>gi|320537569|ref|ZP_08037507.1| KamA family protein [Treponema phagedenis F0421]
gi|320145571|gb|EFW37249.1| KamA family protein [Treponema phagedenis F0421]
Length = 342
Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats.
Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 9/331 (2%)
Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDP--IARQFIPQKEELNILPEEREDPIGDNN 82
+ I A++P LI D + RQ + E LP E DP+G++
Sbjct: 13 ESAAESIKLRLPEAVSPAFIRLIEEAEEADAKALRRQVFAAETEKISLPYESADPLGESR 72
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+ +VH+Y +R+L+ C YCR+CFRR ++G + + + E Y+++
Sbjct: 73 YCVTPFLVHQYTNRVLMLTSGRCLSYCRYCFRRGFTARRQGWIPDT-EIEKITDYLKQNP 131
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
I E++ +GGDP+ + +L+ +LK LR ++R +R PI P+ EL+Q LK
Sbjct: 132 DIKEILVSGGDPMSGTLGQLEALLKRLRQTSPELLIRLCTRAPIFAPELFTEELLQLLK- 190
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ KP++I H NHP E E AI NAG+ + SQSVLL+G+N+ E L L T V
Sbjct: 191 SMKPLWIIPHINHPAELGFEQKKAIDSCINAGLPMQSQSVLLRGVNNSVETLCALFHTLV 250
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ +KP YL DLA GT+ FR+ + + I L++K+SGL P + +DLPGG GK +
Sbjct: 251 CMGVKPGYLFQMDLAPGTAEFRVPLSQALGIWRELRKKLSGLSLPQFAVDLPGGGGKFPL 310
Query: 323 ----DTHNIKKVGN-GSYCITDHHNIVHDYP 348
I K + S+ V+ YP
Sbjct: 311 SILALYDTIVKKDDADSFSALGLDGKVYTYP 341
>gi|313680789|ref|YP_004058528.1| l-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977]
gi|313153504|gb|ADR37355.1| L-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977]
Length = 432
Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 78/382 (20%), Positives = 150/382 (39%), Gaps = 46/382 (12%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQFIPQK 64
TL + + + E++ + P + + LI+ P DPI + PQ+
Sbjct: 16 TLKNIHRHPAYRRLPESLRRELEVAAQVLPFRTNPYVLDELIDWDRAPEDPIFQLVFPQR 75
Query: 65 EELN-------------------------------ILPEERE-DPIGDNNHSPLKGIVHR 92
L+ P + + + + L G+ H+
Sbjct: 76 GMLDSETYARVEAALTSGDREALVEAVWNARRAMNPHPAGQLTHNVPELDGRKLDGLQHK 135
Query: 93 YPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
Y + +L C YC +CFR + S + + Y++ ++ +V+ T
Sbjct: 136 YAETVLFFPAGGQTCHAYCTYCFRWAQFVGDRELKFESSQVDDLVRYLRAHPEVTDVLVT 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKE 202
GGDP+++ + L + L+ L ++ ++ +R S+ P R + L + +
Sbjct: 196 GGDPMVMKTRLLARYLEPLLEVETLRTIRIGSKSLAYWPMRFTTDPDAAEVLRLFERVAA 255
Query: 203 AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
AGK + H +HP E +E+ AAI L G ++ +Q+ L++ +NDD ++ A R
Sbjct: 256 AGKQLAFMAHFSHPRELETEQVQAAIQNLLATGAVVRTQAPLIRHVNDDADVWAEKWRRE 315
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
V L + PYY+ +F + + E Q+I A ++SGL + + GKV+
Sbjct: 316 VRLGLIPYYMFVERDTGPKRYFEVPLAEAQRIFADAYRQVSGLARTVRGPSMSAFPGKVR 375
Query: 322 IDTHNIKKVGNGSYCITDHHNI 343
+ G + +
Sbjct: 376 VVGTAEVA-GEKVFVLEFLQAR 396
>gi|332827425|gb|EGK00177.1| hypothetical protein HMPREF9455_03509 [Dysgonomonas gadei ATCC
BAA-286]
Length = 444
Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats.
Identities = 94/389 (24%), Positives = 160/389 (41%), Gaps = 48/389 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
QL+ TL + Q + I KE + +I+ + + + LI+ N DPI
Sbjct: 7 QLKTYTLHNYQSIPQMAGIPKEFVRDIEIVGRVLPFKTNNYVIDELIDWDNIETDPIFTL 66
Query: 60 FIPQKEELNILPE--------------------------EREDPIGDNNHSPL------K 87
P++ L+ +P G ++ P K
Sbjct: 67 NFPRRGMLDKKHYAIVEKLLDGNAEKSFIDAKIQEIRLSLNPNPAGQEHNVPSLGEIKLK 126
Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
GI H+YP+ +L C YC FCFR G + K+ + L Y++ ++
Sbjct: 127 GIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFAMKEADLLLKYLRVHKEVT 186
Query: 146 EVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE-------- 195
+V+FTGGDP++++ L + L H++ +R ++ P R +
Sbjct: 187 DVLFTGGDPMVMNAAILSSYINPLLTSDFDHIRSIRIGTKSLAYWPYRYLTDTDSDDIIR 246
Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + ++GK + I H NHP E +E AI R+ + G + +QS LLK IND PEI
Sbjct: 247 LFEEINKSGKNLSIQAHFNHPRELSTEAVKQAIMRIRSTGAQIRTQSPLLKHINDKPEIW 306
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A + R V+L PYY+ +F L +E+ I +++SGLC+ +
Sbjct: 307 AQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNIFRRAYQQVSGLCRTVRGPSMS 366
Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GK+++ + G + +
Sbjct: 367 DHAGKIQVLG-VQEIKGEKIFILRFIQGR 394
>gi|124004604|ref|ZP_01689449.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina
ATCC 23134]
gi|123990176|gb|EAY29690.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina
ATCC 23134]
Length = 448
Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats.
Identities = 88/394 (22%), Positives = 160/394 (40%), Gaps = 50/394 (12%)
Query: 2 QLRHKTLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIAR 58
+ ++ TL + +++ + + +++ I+ + N + LI+ N NDPI
Sbjct: 3 KYQNYTLKNFRNIPYVESKLSEDEKFAIEVVGNVLPFKANNYVVEELIDWDNYANDPIFI 62
Query: 59 QFIPQKEELNILPE---------------------------------EREDPIGDNNHSP 85
PQK+ L + +D + + +
Sbjct: 63 LTFPQKDMLKPEHFAHVAHLLKSGVSRADLKTEVNKIRLQLNPHPAGQMKDNVPEVDGVK 122
Query: 86 LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L C YC FCFR + ++TE + YI+
Sbjct: 123 LTGVQHKYRETMLFFPSQGQTCHAYCTFCFRWPQFVGMNELKFAMRETELLVKYIKVNPH 182
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------ 195
I +++FTGGDPLI+ K L + L + +++ +R ++ PQR +
Sbjct: 183 ITDILFTGGDPLIMKTKILASYVDALLEADLPNLKTIRIGTKALGYWPQRFTSDTDADDL 242
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + + +AGK + H NH E +EE AI R+ N G + +QS ++K IND E
Sbjct: 243 LRLFERVNKAGKHLAFMSHFNHGRELETEEVQKAIGRILNTGTAIRTQSPIMKNINDSAE 302
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
A + R V+L PYY+ +F + ++ +I +++SG+C+
Sbjct: 303 AWAYMWRKQVDLGCVPYYMFLARDTGAQDYFAIELDRAWQIFQQSYQQVSGVCRTVRGPS 362
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ G GKV++ G + + D
Sbjct: 363 MSAGPGKVQVLGITEI-HGEKVFALQFLQGRNPD 395
>gi|328949906|ref|YP_004367241.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884]
gi|328450230|gb|AEB11131.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884]
Length = 441
Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats.
Identities = 89/391 (22%), Positives = 160/391 (40%), Gaps = 49/391 (12%)
Query: 4 RHKTLTS--AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59
R++ +T+ + E + + +S + LI+ P DPI +
Sbjct: 12 RYRAITNQNIHKYSEWERLDPELKEAVMVVSQVLPFRTNEYVMRELIDWSRVPEDPIFQL 71
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHSPL------- 86
PQ+E L+ ER P G H+
Sbjct: 72 TFPQREMLDPEDYERIRTLLNNGASREELLAAANEIRFRLNPHPAGQLTHNVPTLNGRKL 131
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC +CFR + +++T+ +AY+Q ++
Sbjct: 132 PGLQHKYHETVLFFPGQGQTCHAYCTYCFRWAQFIGLQDIKFEARETDDLVAYLQAHPEV 191
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
+V+ TGGDP+I+ K L+K L+ L I ++ +R ++ PQR +
Sbjct: 192 TDVLVTGGDPMIMRTKILRKYLEPLLEIPTLRTIRIGTKSLAYWPQRYVTDADADDALRF 251
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + AGK + I H++HP E + A AI R+ G ++ +Q+ L+K +NDDP++ A
Sbjct: 252 FEEIVAAGKHLAIMAHSSHPVELATPIAQEAIRRVRETGAVIRTQAPLIKHVNDDPDVWA 311
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
R V+L + PYY+ +F + + Q+I A+ ++SGL + +
Sbjct: 312 EKWRQEVKLGMIPYYMFVERDTGPKRYFEVPLARAQEIFAAAWRQVSGLARTVRGPSMSA 371
Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GKV+I G + + +
Sbjct: 372 FPGKVRIIGTAEVA-GEKVFVLEFLQGRNPE 401
>gi|308049116|ref|YP_003912682.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
gi|307631306|gb|ADN75608.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
Length = 452
Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats.
Identities = 90/394 (22%), Positives = 152/394 (38%), Gaps = 51/394 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + + N + + E+K +++ + +AN LI+ N P DPI +
Sbjct: 17 RFKVYQQRQLDKIELVNRLPEALKFEMKVVASVLPFRVNEYVANDLIDWDNLPADPIFQL 76
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHSPL------- 86
PQK L ER P G + +
Sbjct: 77 SFPQKGMLAPEAFERMATLLRQNPSPQQVFELGQTLRAEMNPHPAGQMSMNVPELDGEKL 136
Query: 87 KGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR K +S D + Y+ +I
Sbjct: 137 PGMQHKYKETALFFPAQGQYCHSYCTFCFRWAQFVG-KAMRFNSNDADTLHRYLAAHPEI 195
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPE------ 195
+++ TGGDP+++ ++ + ++ L HVQ +RF ++ P R +
Sbjct: 196 SDLLITGGDPMVMKTTKIAQYVEPLIDNPDTEHVQTVRFGTKALTFWPYRFVTDDDADEL 255
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + L +AGK V I H NH E + A+ R+ G + +Q+ LLK IND+ +
Sbjct: 256 LALFRRLVKAGKHVSIMAHLNHWQEMETPIFEEAVRRIRATGANIRAQAPLLKNINDNAD 315
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
A + + V+L I PYY+ +F + + + +I K+SGL +
Sbjct: 316 DWARMWQKQVKLGIIPYYMFVERDTGPKRYFEVPLYQAYEIYRDAISKVSGLARTARGPS 375
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ G GKV+I G + + D
Sbjct: 376 MSAGPGKVEIQGVTEVA-GEKVFVLRFIQARNPD 408
>gi|262199318|ref|YP_003270527.1| radical SAM domain-containing protein [Haliangium ochraceum DSM
14365]
gi|262082665|gb|ACY18634.1| radical SAM domain-containing protein [Haliangium ochraceum DSM
14365]
Length = 458
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 77/390 (19%), Positives = 158/390 (40%), Gaps = 51/390 (13%)
Query: 4 RHKTLTS--AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + +TS L + + + E ++K +++ + + + N LI+ P+DP+ +
Sbjct: 15 KFRVITSKHLGQLDHLSFLSTETRQQLKAVASVFPFRVNEYVVNHLIDWSKVPDDPMFQL 74
Query: 60 FIPQKEELNILPE--------------------------EREDPIGDNNHSPL------- 86
PQ L P G +
Sbjct: 75 TFPQPGMLTDDDMAHMLDLIRRDEPEETITRAAQRIQMRLNPHPAGQMALNVPRVNGKVV 134
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+G+ H+Y + +L C YC +CFR S ++++ E LAY++E I
Sbjct: 135 RGVQHKYRETVLFFPSQGQTCHSYCTYCFRWAQFISNDELKFAAQEVEPLLAYLKEHPGI 194
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP-------- 194
+V+FTGGDP+++ L++ ++ L + HV +R ++ P+ P R
Sbjct: 195 SDVLFTGGDPMVMKTPVLRRYIEPLLAADLPHVSTIRIGTKAPVYWPYRFTDGNDADELL 254
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFS-EEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + + GK + + +H +H E E A++R+ G ++ Q+ L++ +ND PE+
Sbjct: 255 RLFEEIVARGKHLAVLVHFSHYREVEAPEVQTALARIRATGAVIRCQAPLIRHVNDTPEV 314
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+ + V+ PYY+ +F++ + I + ++++SGL + +
Sbjct: 315 WTRMWHSQVKQGAIPYYMFVERDTGPNEYFKVPLHRALDIFQAARKQLSGLSRTVRGPVM 374
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GKV ++ G ++ +
Sbjct: 375 SCTPGKVLVNGTVDLG-GRLAFVLKFLQAR 403
>gi|332885734|gb|EGK05980.1| hypothetical protein HMPREF9456_02244 [Dysgonomonas mossii DSM
22836]
Length = 444
Score = 270 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 95/389 (24%), Positives = 160/389 (41%), Gaps = 48/389 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQ 59
QL+ TL + Q + I KE + I+ + + + LI+ N + DPI
Sbjct: 7 QLKTYTLHNYQSIPQIANIPKEFVKHIEVVGRVLPFKTNNYVIDELIDWDNIDTDPIFTL 66
Query: 60 FIPQKEELNILPE--------------------------EREDPIGDNNHSPL------K 87
P+K L+ +P G ++ P K
Sbjct: 67 NFPRKGMLDKKHYAIVEQLLDDNVEKSIIEDKIHKIRLSLNPNPAGQEHNVPSLGEVKLK 126
Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
GI H+YP+ +L C YC FCFR + K+ + L Y++ ++
Sbjct: 127 GIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSELKFAMKEVDLLLKYLRVHKEVT 186
Query: 146 EVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE-------- 195
+V+FTGGDP++++ L +K L H++ +R ++ P R +
Sbjct: 187 DVLFTGGDPMVMNAAILSSYIKPLLTSDFDHIRSIRIGTKSLAYWPYRYLTDSDSDDIIR 246
Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + ++GK + I H NHP E ++ AI R+ N G + +QS LLK IND PEI
Sbjct: 247 LFEEINKSGKNLSIQAHFNHPRELSTDAVKQAILRIKNTGAQIRTQSPLLKHINDKPEIW 306
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A + R V+L PYY+ +F L +E+ I +++SGLC+ +
Sbjct: 307 AQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNIFRRAYQQVSGLCRTVRGPSMS 366
Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GK+++ + G + +
Sbjct: 367 DHAGKIQVLG-VQEIKGEKLFVLRFIQGR 394
>gi|332297913|ref|YP_004439835.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense
DSM 12168]
gi|332181016|gb|AEE16704.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense
DSM 12168]
Length = 357
Score = 270 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 115/350 (32%), Positives = 180/350 (51%), Gaps = 24/350 (6%)
Query: 19 LIKKEQIDEIKEISNHYSIALTPV---IANLINPHNPND-------PIARQFIPQKEELN 68
+ E+ E ++ + + D + RQ++P EE N
Sbjct: 7 GLTPEEQQFCTEAE--LPFFISTHLKKVLERLYVSGQRDGDLSPFYALRRQYVPSIEEKN 64
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
+LP E DP+G + + +VH+Y +R+LL C YCR CFRR ++G ++
Sbjct: 65 VLPCELSDPLGAHRYQITPRLVHQYKNRVLLLTTARCFAYCRHCFRRTYTSRKQG-FITD 123
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ A AY+ ++ E++F+GGDPL S+ L+++++ +R + ++R +R PI +
Sbjct: 124 AECGEACAYLSSHPEVQEILFSGGDPLTASNDALRQLIRRVRRARPGILIRICTRAPIAE 183
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFS----EEAIAAISRLANAGIILLSQSVLL 244
P+R + ELI KE P+++ H NHP E S E+ A+S L +AGI + SQ+VLL
Sbjct: 184 PERFDSELIALFKE-NAPLWVIPHVNHPAEISNRFSPESYRALSGLVSAGIPVQSQTVLL 242
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND +LA L + IKP YL DLA GTSH R+ I EG K+ L+ ++SGL
Sbjct: 243 RGVNDSVPVLAQLFHELTCMGIKPGYLFQGDLAPGTSHLRVPIREGVKLYERLRGELSGL 302
Query: 305 CQPFYILDLPGGYGKV---KIDTHNI---KKVGNGSYCITDHHNIVHDYP 348
P Y +DLPGG GK+ ++D + Y TD + YP
Sbjct: 303 STPVYAVDLPGGGGKINLLQLDPELLRTGVSQNGNDYLFTDANGNGWTYP 352
>gi|197294893|ref|YP_002153434.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
gi|195944372|emb|CAR56973.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
Length = 466
Score = 270 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 88/385 (22%), Positives = 153/385 (39%), Gaps = 49/385 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
+ + DL + ++I ++ + + LI+ N P+DP+ R
Sbjct: 28 FKAYNRSKLDDLPQLARLPPRMREQIGLVARVLPFKVNRYVVEQLIDWTNVPDDPLFRLT 87
Query: 61 IPQKEEL--------------------------------NILPEEREDPIGDNNHSPLKG 88
PQ + L N P ++ + + P G
Sbjct: 88 FPQPDMLAPDDLGELAMLSRDAARGADLDALIGRLRVRMNPHPADQRLNEPELDGEPCPG 147
Query: 89 IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
I H+Y +L H C YC FCFR +S + AY++ ++ +
Sbjct: 148 IQHKYAQTVLYFPSHGQTCHAYCTFCFRWPQFVGDASLKFASSEAARLHAYLRAHGEVTD 207
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPELIQC 199
++ TGGDP+++S RL++ L L ++HV +R ++ P R PEL+
Sbjct: 208 LLMTGGDPMVMSATRLREYLMPLLAPGLEHVGNIRIGTKALTYWPYRFVSDPDTPELLAL 267
Query: 200 LK---EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
L+ +AG+ V + H NH E +E A A++ L G+++ SQ +L+ INDD E+
Sbjct: 268 LRTLIDAGRNVTVMAHLNHWRELSTEVAEQAVTNLRRIGVVIRSQGPVLRHINDDAEVWR 327
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
V L I PYY+ +F L + I + +SGL + +
Sbjct: 328 RNWVGQVRLGIVPYYMFVERDTGPRGYFELPLARALDIYNTAIASVSGLARSARGPSMSA 387
Query: 316 GYGKVKIDTHNIKKVGNGSYCITDH 340
G GKV++ ++ Y + +
Sbjct: 388 GPGKVEVAGT--LELQGQRYFLLNF 410
>gi|301166000|emb|CBW25574.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 340
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 126/346 (36%), Positives = 185/346 (53%), Gaps = 18/346 (5%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
++ + L + Q ++ + + + A I + P+A QF+PQ
Sbjct: 9 RDSIKTHAALEEFF---EAQFPKVD-----FPLLIPRKFATHIKKAGLDSPLANQFLPQV 60
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E DPIGD+N SPL IVHRY +RIL VCPV CR+CFR+ +G+
Sbjct: 61 SE--NDLGGESDPIGDHNQSPLAQIVHRYENRILFFPTQVCPVICRYCFRKNELGTNDEL 118
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ E L Y+++ S+I E+IF+GGDPLILS +R++ L + I H++ +RFH+R
Sbjct: 119 F--KANFEKVLEYLKQHSEINEIIFSGGDPLILSDERIEFYLNEFKKIPHIKFIRFHTRT 176
Query: 185 PIVDPQRINPELIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
PI+ P RI + ++ K + IH NH EF+EE A+S L LLSQS
Sbjct: 177 PIILPSRITENFCKIIENFKKDFLQINFIIHVNHSQEFNEENKVALSLLHAHCSNLLSQS 236
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+N+ + L L+ ++L I+PYYLHHPD G HF LT+EEG+ + A+L+ +
Sbjct: 237 VLLKGVNNSKQALLKLIDELIKLNIRPYYLHHPDKVKGGLHFMLTLEEGRNLYATLRNHL 296
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
G P YI+D+PGG GKV + + N S + + Y
Sbjct: 297 PGWALPQYIIDIPGGEGKV---SAYNPETYNFSGHLINRKGTKVPY 339
>gi|332829850|gb|EGK02492.1| hypothetical protein HMPREF9455_01449 [Dysgonomonas gadei ATCC
BAA-286]
Length = 441
Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats.
Identities = 87/388 (22%), Positives = 160/388 (41%), Gaps = 48/388 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQF 60
L+ TL + + + +E + +I+ + + + LI+ N + DPI
Sbjct: 5 LKSYTLHNFLSIPQIASLSEEMVRDIEVVGRVLPFKTNNYVVDELIDWDNLDTDPIFTLN 64
Query: 61 IPQKEELNILPE--------------------------EREDPIGDNNHSP------LKG 88
P++ L +P G ++ P LKG
Sbjct: 65 FPRRGMLEKKHYAAVERLLNEHFDGKELNEKIQQIRLSLNPNPAGQEHNVPYLGEIKLKG 124
Query: 89 IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
I H+YP+ +L C YC FCFR G + K+ + Y++ ++ +
Sbjct: 125 IQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFAMKEADLLFKYLRLHKEVTD 184
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196
++FTGGDP+I++ L+ ++ L H++ +R ++ P R + L
Sbjct: 185 ILFTGGDPMIMNASTLEAYIRPLLEPEFDHIRTIRIGTKSLAYWPYRYLTDKDSDDIIRL 244
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + +GK + + H NHP E +E AI+R+ + G + +QS LL+ IND PE+ A
Sbjct: 245 FELVNRSGKSLSLQAHFNHPRELSTEAVKQAIARIRSTGSQIRTQSPLLRNINDKPELWA 304
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ R V+L PYY+ +F L +E+ +I ++SGLC+ +
Sbjct: 305 RMWRKQVDLGCIPYYMFIARDTGSKHYFELPLEKCWQIFRRAYRQVSGLCRTVRGPSMSD 364
Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GK+++ + G + +
Sbjct: 365 HAGKIQVLG-VQEIKGEKIFVLRFIQGR 391
>gi|77918358|ref|YP_356173.1| hypothetical protein Pcar_0744 [Pelobacter carbinolicus DSM 2380]
gi|77544441|gb|ABA88003.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 442
Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats.
Identities = 85/394 (21%), Positives = 146/394 (37%), Gaps = 49/394 (12%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
M+ T + + E +K +S + + + LI+ P+DP+ R
Sbjct: 1 MEYHAYTPDHFDRIAELGCLSAEYRFGMKVVSQVLPFRVNRYVIDELIDWGKVPHDPMFR 60
Query: 59 QFIPQKEELNILPE--------------------------EREDPIGDN-------NHSP 85
P L P G +
Sbjct: 61 LVFPDPGMLLPDDFKQIASLLASGADRQALDRAVHEIRLRLNPHPAGQQTLNVPCLDGHK 120
Query: 86 LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L C YC FCFR ++ + T Y++ S+
Sbjct: 121 LPGLQHKYRETVLFFPRLGQTCHSYCSFCFRWPQFVCERDMRIMGPRTPGLFDYLRRHSE 180
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------ 195
+ +++ TGGDPL++ L + L+ L H+Q +R ++ P R +
Sbjct: 181 VTDLLVTGGDPLVMKAASLAEFLEPLLSPEFAHLQTIRIGTKSLSFWPYRFLTDRDADDL 240
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + L + GK + + H NH E +E A AI R+ G + +QS ++ +NDDP+
Sbjct: 241 LRLFERLVKGGKHLAVMAHYNHWRELETEVARRAIERVKATGATIRTQSPVVAHVNDDPQ 300
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
+ L +T V L + PYYL +F + +E +I +K+SGL +
Sbjct: 301 VWVRLWQTQVRLGMVPYYLFVARDTGARHYFAIPLERCWQIYRQAIQKLSGLARTVRGPS 360
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ G GKV+I + + D
Sbjct: 361 MSAGPGKVEIQGVAEVGQ-EKVFVLRFIQARNPD 393
>gi|171316099|ref|ZP_02905324.1| radical SAM domain protein [Burkholderia ambifaria MEX-5]
gi|171098703|gb|EDT43497.1| radical SAM domain protein [Burkholderia ambifaria MEX-5]
Length = 465
Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats.
Identities = 85/382 (22%), Positives = 152/382 (39%), Gaps = 50/382 (13%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + L+ E + + +S + P + N LI+ P+DPI R
Sbjct: 8 KFKPYTRHTVSQSPRWQLLPSELQEAVDVVSRVLPFRVNPYVLNELIDWDKVPDDPIYRL 67
Query: 60 FIPQKEELNILPE--------------------------EREDPIGDNNHS-------PL 86
P ++ L P G H+ PL
Sbjct: 68 TFPHRDMLKDHEYAAIRDLVRECADEARIEAVVRQIRLRMNPHPAGQLTHNVPYLDGVPL 127
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR ++ ++ AY++ ++
Sbjct: 128 SGLQHKYRETVLFFPSAGQSCHAYCTFCFRWPQFVGMDELKFDARSSQELTAYLRRHPEV 187
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRI-----NPELI 197
+++ TGGDPL++S + L + L+ L H+Q +R ++ PQR + +L+
Sbjct: 188 TDILVTGGDPLVMSARALGEYLEPLLAPEFDHLQNIRIGTKSVAYWPQRFVSDKDSDDLL 247
Query: 198 QCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ ++ +G+ + I H NHP E A A+ R+ G + Q+ L++ IN+DP
Sbjct: 248 RVFEKVVASGRNLAIMGHYNHPRELQHPIAQRALRRIIGTGASVRIQAPLIRHINEDPAA 307
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L T V L PYY+ + +F+L + +I + +SGL + +
Sbjct: 308 WAELWTTGVRLGAIPYYMFVERDTGPSDYFKLPLARAYEIFQAAYRSVSGLARTVRGPSM 367
Query: 314 PGGYGKVKIDTHNIKKVGNGSY 335
GKV + I ++
Sbjct: 368 SAFPGKVMV--DGIVELAGEKV 387
>gi|300087493|ref|YP_003758015.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527226|gb|ADJ25694.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 440
Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats.
Identities = 85/393 (21%), Positives = 162/393 (41%), Gaps = 48/393 (12%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPH-NPNDPIAR 58
MQ + TL + +++ + ++I +I+ + + NLI+ DP+
Sbjct: 1 MQYKPFTLNNFREIPQVEALSLQKIRDIEVVGTVLPFRTNNYVVDNLIDWECAETDPLFI 60
Query: 59 QFIPQKEELNILPEERED--------------------------PIGDNNHSPL------ 86
PQK L+ R D P G +
Sbjct: 61 ATFPQKGMLSPEDYHRVDTLLREGAGQEVILRTVTEIRQKMNPHPAGQLELNVPVLNGES 120
Query: 87 -KGIVHRYPDRILLKLLH--VCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKS 142
GI H+Y + +L C YC FCFR + V + ++S++ + + Y++ +
Sbjct: 121 LPGIQHKYRETVLFFPSQGQTCHAYCTFCFRWPQFVKGMEDLKIASREIDTLVEYLKSRP 180
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPE------ 195
++ +V+ TGGDPL++ L + ++ L + ++ +R +R P R + +
Sbjct: 181 EVTDVLVTGGDPLVMKAGLLARYIEPLLVLPGIRTIRIGTRSLSFWPYRYVTDDDAEELL 240
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + ++EAGK + H NHP E E A+ R+ G ++ +QS LL+ IND +
Sbjct: 241 TLFRRVREAGKHLAFMAHFNHPVELLPEIVPEAVRRIRETGAVIRTQSPLLRHINDSEAL 300
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + R V++ PYY+ +F +T+++ ++ + ISG+C+ +
Sbjct: 301 WAQMWRRQVDMGCVPYYMFMARDTGAQRYFSVTLQDAWRVYQGAFQAISGICRTAEGPVM 360
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GKV++ G+ + + D
Sbjct: 361 SALPGKVQVMGTATIG-GDKVFVLRLVQGRNPD 392
>gi|113477791|ref|YP_723852.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101]
gi|110168839|gb|ABG53379.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101]
Length = 445
Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats.
Identities = 83/391 (21%), Positives = 153/391 (39%), Gaps = 49/391 (12%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
+++R + + + ++ IK ++ I LI+ +N PNDP+ R
Sbjct: 8 LKIRFYGAKNLDSIPQLSNFSEQDRLGIKAVAQVLPFLTNNYILEQLIDWNNVPNDPMFR 67
Query: 59 QFIPQKEELNILPEE--------------------------REDPIGDNNHS-------P 85
P E L P G H+ P
Sbjct: 68 LTFPHPEMLESKDYNHIIQLLTENAPKTVLKQAANKIRQQLNPHPSGQKQHNVPTFNSEP 127
Query: 86 LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ GI H+Y + +L+ C YC FCFR +G +++++ Y+Q+ +
Sbjct: 128 VPGIQHKYRETVLVFPTAGQTCHAYCTFCFRWPQFVGLEGLKFATRESGMFQQYLQQHQE 187
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQR-INPE----- 195
+ +V+FTGGDP+ + ++L + L H+Q +R ++ P R + E
Sbjct: 188 VRDVLFTGGDPMTMKARQLSLYIDPLLEAKFDHIQTIRIGTKSISFWPYRYVTDEDADNT 247
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + + + GK + I H H E + A AI R+ + G + +Q+ +++ IND E
Sbjct: 248 LRLFEKIVKRGKHLAIMAHYEHWQELDTPVATEAIRRIRSTGAQIRTQAPVVRHINDSAE 307
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
A +++ V L PYY+ +F + + +I +++SGL +
Sbjct: 308 TWAKMLQMQVSLGCIPYYMFVERQTGAKKYFEIPLVRVLEIYREAVKQVSGLARTIRGPL 367
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
+ GKV ID G + ++
Sbjct: 368 MSALPGKVAIDGVAEIA-GEKVFVLSFLQGR 397
>gi|118577041|ref|YP_876784.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A]
gi|118195562|gb|ABK78480.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A]
Length = 456
Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats.
Identities = 85/394 (21%), Positives = 156/394 (39%), Gaps = 52/394 (13%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
L+ T+++ + L + +E E+ +++ + LI+ P+DP+
Sbjct: 18 LKSYTISNYKQLPQVQALSEEVRFEMDVVASVLPFKTNNYVVEQLIDWDRVPDDPMYVLT 77
Query: 61 IPQKEEL-------------NILPEERED-------------PIGD--------NNHSPL 86
PQK L N P+E D P G + + L
Sbjct: 78 FPQKNMLKKRHFDQVAQMIKNETPKEEMDKKINDVRMELNPHPAGQLELNVPSLKDGTKL 137
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR + ++ E YI E +I
Sbjct: 138 YGMQHKYNETCLFFPSQSQTCHAYCTFCFRWPQFVGMDDMKFAMREGEQLAQYIGEHPEI 197
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI--------NP 194
+V+FTGGDP+I+ K + + TL + ++ +R +++ P ++
Sbjct: 198 SDVLFTGGDPMIMKAKMFRTYVDTLIDAKLPNLTTIRIGTKMLSYWPYKVLSDDDAAETL 257
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ + + ++G + I H NHP E ++ +AI ++ G + +QS LL INDD +
Sbjct: 258 DTFRHISDSGLHLSIMGHFNHPVELSTDAVKSAIRKIRATGAQIRTQSPLLSHINDDADA 317
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+ V L PYY+ +F +++ +I S ++SGL + +
Sbjct: 318 WVRMWTQQVRLGCIPYYMFIVRDTGAQHYFGMSLARAYEIFTSAYRRVSGLARTVKGPSM 377
Query: 314 PGGYGKVKIDTHNIKKVGNGS-YCITDHHNIVHD 346
GKV I + I ++G + + +
Sbjct: 378 SATPGKVLI--NGIPEIGGKKLFSLRFLQGRNPE 409
>gi|226946213|ref|YP_002801286.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ]
gi|226721140|gb|ACO80311.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ]
Length = 433
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 82/391 (20%), Positives = 162/391 (41%), Gaps = 49/391 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + +L + + KE+ ++ + + + I + LI+ N P+DPI R
Sbjct: 9 KFQPYSLRNIHHAPQWQKLSKEEKHSLEVLGAVFPFKVNQYILDELIDWGNIPDDPIFRL 68
Query: 60 FIPQKEELNILPEE--------------------------REDPIGDNNHS-------PL 86
P K+ L + +P G H+ P+
Sbjct: 69 TFPHKDMLRESEFQELSNAILNQFNEAEIQSISNKIRFRMNPNPAGQMTHNVPRMNGVPI 128
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR ++ +E + Y++E ++
Sbjct: 129 NGLQHKYKETVLFFPSAGQTCHSYCTFCFRWPQFVGMSSLRFEARSSEPLVQYLKEHKEV 188
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195
+V+ TGGDPL+++ + L + ++ L ++H++ +R ++ PQR +
Sbjct: 189 TDVLITGGDPLVMNTRILYEFIRPLLIPELEHIKNIRIGTKSISYWPQRFVTDKDADDLL 248
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + + GK + + H NHP E ++ A A+ R+ G+ + QS ++K IND+P+
Sbjct: 249 HLFEDIIATGKNLALMAHYNHPCEIKTKIAQIAVKRIVGTGVTVRMQSPIIKHINDNPQA 308
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+L T V+L PYY+ +++F + + +I + +SGL + +
Sbjct: 309 WVDLWTTGVQLGAIPYYMFVERDTGPSNYFEIPLVSAWEIFQKAYQSVSGLARTVRGPSM 368
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
GK+ +D ++ G +
Sbjct: 369 STFPGKIMVDGI-VEICGEKVIALQFLQARE 398
>gi|291301955|ref|YP_003513233.1| hypothetical protein Snas_4495 [Stackebrandtia nassauensis DSM
44728]
gi|290571175|gb|ADD44140.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM
44728]
Length = 432
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 78/382 (20%), Positives = 154/382 (40%), Gaps = 48/382 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQ 59
+ R T ++L + EQ + ++ + + LI+ P+DPI R
Sbjct: 12 RFRAYTARHLEELLTRAGLSPEQRLRARAVATVLPFRTNDYVIDELIDWDAAPDDPIYRL 71
Query: 60 FIPQKEE--------------------------------LNILPEERED-PIGDNNHSPL 86
PQ++ LN P + D + +
Sbjct: 72 VFPQEDMLPAEDVSKLAKLLDADPKGPELKAEVFAIRRRLNPHPAGQLDLNKPKLGEADI 131
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+YP+ +L C YC +CFR + ++S D +A + YI+ +I
Sbjct: 132 PGMQHKYPETVLFFPQQGQTCHAYCTYCFRWAQFVGESDLKMASNDIDALVGYIKAHPEI 191
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPEL 196
V+ TGGD +I+ L++ ++ L ++ ++ +R ++ PQR L
Sbjct: 192 TSVLITGGDAMIMGAPVLRRYIEPLIQLEQLESIRMGTKALAYWPQRFVTDPDADDTLRL 251
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + E+GK + H +H E + A+ R+ + G ++ +Q+ L+K INDDP++ +
Sbjct: 252 FEEVCESGKNLAFQAHFSHTRELAPTMLHDAVKRIRDTGAVIRTQAPLIKSINDDPQVWS 311
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
++ R + + PYY+ +F + + I ++SGLC+ +
Sbjct: 312 DMWRKHHTMGMVPYYMFVERDTGPQEYFAVPLARAYDIFQEAYSQVSGLCRTVRGPSMSA 371
Query: 316 GYGKVKIDTHNIKKVGNGSYCI 337
GKV + + ++ +
Sbjct: 372 DPGKVAV--DGVVEINGTRVFV 391
>gi|297196895|ref|ZP_06914292.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083]
gi|197711500|gb|EDY55534.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083]
Length = 438
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 74/388 (19%), Positives = 147/388 (37%), Gaps = 49/388 (12%)
Query: 4 RHKTL--TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQ 59
R + D+ + + D I +++ + + + LI+ +P DPI R
Sbjct: 13 RFRAFGPRQIDDIARRYGLSPKIRDGIALLAHVLPFRVNEYVLDQLIDWTDPAQDPIFRL 72
Query: 60 FIPQKEELNILPE--------------------------EREDPIGDNNHSPL------- 86
PQ+ L E P G ++
Sbjct: 73 VFPQRGMLPEDDERSLESLVRSGAAKREMAAEVARIRAGLNPHPSGQREYNVPVHEGERL 132
Query: 87 KGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C +C +CFR ++ + ++Y+ + ++
Sbjct: 133 AGLQHKYRETVLYFPTQGQSCHSFCTYCFRWAQFVGDPSLRFAAPGPDRLVSYLHDHPEV 192
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
+V+ TGGDP+++S +RL L+ L ++ V +R ++ PQR + L
Sbjct: 193 SDVLVTGGDPMVMSTERLTGHLEPLLGVESVNTVRIGTKSLAYWPQRFVSDADADSLLRL 252
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + GK V + H HP E + A+ R+ G ++ Q+ ++ INDD E A
Sbjct: 253 FERIAATGKQVAVMAHFTHPRELRTARVTEAVRRIRATGAVVYCQAPMVAHINDDAETWA 312
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
++ ++ + L PYY+ +F++ + +I + + GL + +
Sbjct: 313 SMWKSELALGAVPYYMFVERDTGPYDYFKVPLARAMEIFHTAYRTLPGLARTVRGPVMST 372
Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GKV +D G+ + +
Sbjct: 373 TPGKVVVDGVETLG-GDRYFQLRLAQAR 399
>gi|269125115|ref|YP_003298485.1| hypothetical protein Tcur_0857 [Thermomonospora curvata DSM 43183]
gi|268310073|gb|ACY96447.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183]
Length = 446
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 73/380 (19%), Positives = 144/380 (37%), Gaps = 48/380 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R T +L + +Q I+ ++ + LI+ P+DPI R
Sbjct: 18 KFRAYTAKHLDELTARAGLSADQRLAIRAVATVLPFRTNSYVVEELIDWSAAPDDPIYRL 77
Query: 60 FIPQKEEL--------------------------------NILPEERED-PIGDNNHSPL 86
PQ++ L N P + + + +
Sbjct: 78 VFPQEDMLPADDVAHIAGLLRRQAPRQEIEAAAHRVRMRLNPHPAGQLELNVPSFGDGVV 137
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC +CFR + L+ D Y+ ++
Sbjct: 138 PGMQHKYDETVLYFPKQGQTCHAYCTYCFRWAQFVGEPDLKLAGDDALQLRDYLVAHPRV 197
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
V+FTGGD +I+ L++ ++ L ++ ++ +R ++ PQ+ + L
Sbjct: 198 TNVLFTGGDAMIMGEPVLRRYVEPLLELEQIESIRIGTKSLAYWPQKFVTDPDADAMLRL 257
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + AGK + H +HP E A+ R+ G ++ +Q+ L++ INDDP++
Sbjct: 258 FEQVVNAGKSLAFMAHFSHPRELEPAMVREAVRRIRGTGAVIRTQAPLIRSINDDPKVWE 317
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ RT + + PYY+ +F + + +I +SGL + +
Sbjct: 318 TMWRTQTRMGMVPYYMFVERDTGPRDYFAVPLGRAYEIFRDAYRHVSGLARTVRGPSMSA 377
Query: 316 GYGKVKIDTHNIKKVGNGSY 335
GKV + + ++
Sbjct: 378 TPGKVCV--DGVLELAGEKV 395
>gi|329765548|ref|ZP_08257124.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329137986|gb|EGG42246.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 455
Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats.
Identities = 83/394 (21%), Positives = 157/394 (39%), Gaps = 51/394 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+L+ TL + ++L + ++ E++ + N + LI+ +N PNDP+
Sbjct: 15 RLKSYTLANFRELPQIQKMGAKKQFEMEVVGNVLPFKTNNYVIEQLIDWNNIPNDPMFVL 74
Query: 60 FIPQKEELNILPEE-------------------------REDPIGDN--------NHSPL 86
PQ+ L P G + + L
Sbjct: 75 TFPQRGMLIPEHYSKMESALKKGDKKEIQNTANEIRLQLNPHPAGQMELNVPTLKDGTKL 134
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR + ++ E + Y++E +I
Sbjct: 135 YGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDELKFAMREGEQLVQYLREHPEI 194
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PELI 197
+V+FTGGDP+I+ K + L + +++ +R ++ P + E++
Sbjct: 195 SDVLFTGGDPMIMKAKIFSTYINPLLEANLPNLRTIRIGTKALSYWPYKFLTEDDAEEML 254
Query: 198 QCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
K G + + H NH E ++ AI ++ G + +QS LL+ INDD ++
Sbjct: 255 DIFKRVVDKGIHLAVMGHFNHLVELKTDAVKEAIKKIRATGAQIRTQSPLLRHINDDADM 314
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + + V+L PYY+ +F +++ + Q+I +K++GL + +
Sbjct: 315 WAEMWKVQVQLGCIPYYMFVVRDTGAQHYFGISLIDAQRIFRDAYKKVTGLARTVRGPSM 374
Query: 314 PGGYGKVKIDTHNIKKVGNGSY-CITDHHNIVHD 346
GKV+I I +V + + + D
Sbjct: 375 SATPGKVQILG--ITEVNDEKFMVLRFLQGRNPD 406
>gi|332706173|ref|ZP_08426242.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L]
gi|332355010|gb|EGJ34481.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L]
Length = 445
Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats.
Identities = 84/382 (21%), Positives = 152/382 (39%), Gaps = 49/382 (12%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL 67
++L + + +K +S + + I LI+ +N P+DPI R P + L
Sbjct: 16 DIENLPQLQKLPSHERLAMKAVSKVFPFRVNNYIVEQLIDWNNLPDDPIFRMTFPHPDML 75
Query: 68 NILPEER--------------------------EDPIGDNNHSPLK-------GIVHRYP 94
N R P G +++ + GI H+YP
Sbjct: 76 NPEDLNRVIKLLKTNGSKETIRRTVDDIRSRLNPHPGGQVDYNVPRLDGELISGIQHKYP 135
Query: 95 DRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
D +L+ C YC+FCFR +++++ Y+++ ++ +V+ TGG
Sbjct: 136 DTVLIFPSSGQACHAYCQFCFRWAQFVDTNTHKFTTRESGRFQDYLRQHKEVTDVVLTGG 195
Query: 153 DPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQR-INP-------ELIQCLKE 202
DP+I+S +RL + ++ L +H+Q +R ++ P R + L + +
Sbjct: 196 DPMIMSARRLFQYIEPLLDPEFEHIQTIRIGTKSVAYWPYRYVTDRDADDVLRLFEKIVY 255
Query: 203 AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+GK + + H H E + A AI R+ + G L +QS LLK +ND + +
Sbjct: 256 SGKHLAVMGHYTHWRELDTPIAQEAIRRIRSTGAQLRAQSPLLKHVNDSARAWRKMWQMQ 315
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
V L PYY+ +F + + +I + +SGL Q + GKV
Sbjct: 316 VRLGCIPYYMFVERDTGPKHYFGIPLVRTWEIFRHAIKGVSGLSQTVRGPVMSALPGKVL 375
Query: 322 IDTHNIKKVGNGSYCITDHHNI 343
I +G + ++
Sbjct: 376 ISGVAHI-MGERVFVLSFIRGR 396
>gi|238027720|ref|YP_002911951.1| hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1]
gi|237876914|gb|ACR29247.1| Hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1]
Length = 454
Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats.
Identities = 83/380 (21%), Positives = 147/380 (38%), Gaps = 48/380 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59
+ + S + + I E + + IS + + LI+ P+DP+ R
Sbjct: 5 KFKAYNAKSIANSPYWSRIPNEIKEALGTISRVLPFRINEYVLRELIDWERVPDDPVFRL 64
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHS-------PL 86
P L R P G H+ PL
Sbjct: 65 TFPHPGMLPADDYRRLRELLAQGADPAAGARYIDALRHRMNPHPAGQMTHNVPMLDGRPL 124
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR + ++++++ Y++ ++
Sbjct: 125 PGLQHKYAETVLFFPAAGQTCHAYCSFCFRWPQFIGAEDMKFNARESDELSRYLRLHPEV 184
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
+V+ TGGDP++++ + L ++ L I H+Q +R ++ PQR + L
Sbjct: 185 TDVLITGGDPMVMNAESLAGYIEPLLAIPHLQNIRIGTKSVAYWPQRFVTDKDADAVLRL 244
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + GK + + H NHP E E A A+ R+ G + QS +++ IND E
Sbjct: 245 FERVVAHGKNLSVMAHYNHPAELRPEIARRAVKRIIGTGATVRMQSPIVRHINDSAETWQ 304
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
L T V L PYY+ +F L + + I + +++SGL + +
Sbjct: 305 ELWTTGVRLGAIPYYMFVERDTGPQRYFELPLVDAYHIFRNAYQRVSGLSRTVRGPSMST 364
Query: 316 GYGKVKIDTHNIKKVGNGSY 335
YGKV + + +G
Sbjct: 365 LYGKVLV--DGVVTLGGEKV 382
>gi|302326000|gb|ADL25201.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 332
Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 18/326 (5%)
Query: 6 KTLTSAQDLYNANL-----IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP--IAR 58
KT T + + + E + + ++ + A+LI N +P + R
Sbjct: 16 KTFTHISEFLDYLGNDFTGLTSEMRANLDQ-EPTFAFNCSKHYADLIK--NSAEPVKLLR 72
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+ +P +EL P +DP+GD + I+ +Y +R L+ C V CRFCFRR
Sbjct: 73 EVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVSTSACGVRCRFCFRRNYP 132
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ S ++ + IWEVI +GGDPL L + +++ + + V L
Sbjct: 133 FQDTQNIAS-----EVSNWLDVHTSIWEVILSGGDPLTLGPGPFRDLVEAIAFHPSVTTL 187
Query: 179 RFHSRVPIVDPQRINP--ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
R H+R+PI+ P + EL++ L + +H NHP E EE+ A ++L +G
Sbjct: 188 RIHTRLPIMRPDLVMQHFELLRELPA-RFNCVLVVHVNHPDELDEESAAVFAQLKFSGWT 246
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
LL+QSVLLKG+NDD E L L R E + PYYLH D A G +HF ++ E ++++A
Sbjct: 247 LLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKGVAHFEVSDERARELIAQ 306
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
++ K+ G P + ++ G K I
Sbjct: 307 IRTKLPGYLVPKLVREIAGEKSKTPI 332
>gi|149377740|ref|ZP_01895474.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893]
gi|149357966|gb|EDM46454.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893]
Length = 241
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 132/240 (55%), Gaps = 2/240 (0%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
P G++ +Y R LL + C + CR+CFRR LS +D A+ + E ++
Sbjct: 1 MPATGLIRKYDSRALLMVTGQCAINCRYCFRRHFPYEDH--RLSPEDRTQAIKTLSEDTR 58
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ EVIF+GGDPL+ + + L + L I H++ LR H+R+P+V PQR+ LI+ L +
Sbjct: 59 LNEVIFSGGDPLVANDRLLSAWAEALAAIPHIRRLRVHTRLPVVIPQRVTDSLIKWLSGS 118
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+ IH NHP E + A+ RL AGI LL+QSV+LKG+ND+ +LA L E
Sbjct: 119 RLQAVVVIHVNHPAELDADTQRALERLKAAGITLLNQSVVLKGVNDNARVLAELSERLFE 178
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ PYYLH D AG HF ++ + + +V L + G P + ++PG GK +D
Sbjct: 179 CGVLPYYLHAFDPVAGAHHFEVSDNKARDLVRQLITLLPGFLVPRLVREIPGQSGKTPLD 238
>gi|145595294|ref|YP_001159591.1| hypothetical protein Strop_2771 [Salinispora tropica CNB-440]
gi|145304631|gb|ABP55213.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440]
Length = 448
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 80/368 (21%), Positives = 146/368 (39%), Gaps = 45/368 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R +L + + + I+ IS + + + LI+ P+DPI R
Sbjct: 13 RFRSFGPHHIDELGARYGLSADNVRAIRTISRVLPFRVNEYVLSHLIDWDRIPDDPIFRL 72
Query: 60 FIPQKEELNILPE-------------------------EREDPIGDNNHSPL-------K 87
PQ+ L E P G H+
Sbjct: 73 VFPQRGMLAAADERLLGDLLGAGDRTGLRVEVARIRAGLNPHPSGQQQHNVPHLDGHELP 132
Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L C YC +CFR ++ E + Y+ +
Sbjct: 133 GMQHKYRETVLYFPQQGQTCHAYCTYCFRWAQFVGDADLRFAAPGPEQLVTYLHRHPAVT 192
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197
+V+ TGGDP+I+S +RL+ ++ L + V+ +RF ++ P R + L
Sbjct: 193 DVLVTGGDPMIMSTERLRSHVEPLLRVDTVRTVRFGTKAVAYWPYRFVSDSDADDLLRLF 252
Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ AG+ V + H +HP E +E A AI+R+ + G ++ Q+ L++ +NDDP ++
Sbjct: 253 AQVVAAGRNVAVMAHFSHPRELATEIATRAIARIRSTGAVVYCQAPLIRYVNDDPHAWSD 312
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
+ R + L PYY+ +F++ + I + + + GL + +
Sbjct: 313 MWRAELALGAVPYYMFVERDTGPRDYFQVPLTRAADIFRTAYQDLPGLARTVRGPVMSAT 372
Query: 317 YGKVKIDT 324
GKV +D
Sbjct: 373 PGKVLVDG 380
>gi|261416917|ref|YP_003250600.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373373|gb|ACX76118.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 322
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 18/326 (5%)
Query: 6 KTLTSAQDLYNANL-----IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP--IAR 58
KT T + + + E + + ++ + A+LI N +P + R
Sbjct: 6 KTFTHISEFLDYLGNDFTGLTSEMRANLDQ-EPTFAFNCSKHYADLIK--NSAEPVKLLR 62
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+ +P +EL P +DP+GD + I+ +Y +R L+ C V CRFCFRR
Sbjct: 63 EVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVSTSACGVRCRFCFRRNYP 122
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ S ++ + IWEVI +GGDPL L + +++ + + V L
Sbjct: 123 FQDTQNIAS-----EVSNWLDVHTSIWEVILSGGDPLTLGPGPFRDLVEAIAFHPSVTTL 177
Query: 179 RFHSRVPIVDPQRINP--ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
R H+R+PI+ P + EL++ L + +H NHP E EE+ A ++L +G
Sbjct: 178 RIHTRLPIMRPDLVMQHFELLRELPA-RFNCVLVVHVNHPDELDEESAAVFAQLKFSGWT 236
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
LL+QSVLLKG+NDD E L L R E + PYYLH D A G +HF ++ E ++++A
Sbjct: 237 LLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKGVAHFEVSDERARELIAQ 296
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
++ K+ G P + ++ G K I
Sbjct: 297 IRTKLPGYLVPKLVREIAGEKSKTPI 322
>gi|239944852|ref|ZP_04696789.1| hypothetical protein SrosN15_27950 [Streptomyces roseosporus NRRL
15998]
gi|239991318|ref|ZP_04711982.1| hypothetical protein SrosN1_28712 [Streptomyces roseosporus NRRL
11379]
gi|291448314|ref|ZP_06587704.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998]
gi|291351261|gb|EFE78165.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998]
Length = 448
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 76/380 (20%), Positives = 152/380 (40%), Gaps = 50/380 (13%)
Query: 4 RHKTL--TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
R +T+ ++ + ++ ++ +S + + + LI+ H P DPI +
Sbjct: 13 RFRTVGPQHMDEVAARYGMSHSALETVRAVSRVLPFRVNDYVLSELIDWHRVPEDPIFQL 72
Query: 60 FIPQKEEL--------------------------------NILPEERED-PIGDNNHSPL 86
PQ L N P + + + L
Sbjct: 73 VFPQHGMLRAEDEKLLVDLARARAPKREIAAEVRRIRAGLNPHPSGQMELNVPSLADDAL 132
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+GI H+Y + +L C YC +CFR ++ E + Y++ +
Sbjct: 133 EGIQHKYRETVLYFPQQGQTCHSYCTYCFRWAQFIGDADLRFAAPGPERLVEYLRCHPAV 192
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
+V+FTGGDP+++S +RL+ L+ + ++ V+ +R ++ PQR + L
Sbjct: 193 SDVLFTGGDPMVMSTERLRSHLEPVLSVETVRTVRIGTKAVAYWPQRFVSDADADDLLRL 252
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + +G+ + + H +HP E + A A+ R+ G ++ Q+ L+ +NDD A
Sbjct: 253 FEQVVASGRTLAVMAHFSHPRELETATARRALGRVRATGAVVYCQAPLIAHVNDDARTWA 312
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
L R + PYY+ +F + + +G +I + K+ GL + +
Sbjct: 313 ELWRAELSAGTVPYYMFVERDTGPRHYFEVPLTKGLEIFRTAYSKLPGLARTVRGPVMSA 372
Query: 316 GYGKVKIDTHNIKKVGNGSY 335
GKV + +++ G +
Sbjct: 373 TPGKVLV--DGVEETAEGRF 390
>gi|149911234|ref|ZP_01899857.1| hypothetical 38.7 kDa protein [Moritella sp. PE36]
gi|149805688|gb|EDM65687.1| hypothetical 38.7 kDa protein [Moritella sp. PE36]
Length = 310
Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 99/305 (32%), Positives = 162/305 (53%), Gaps = 10/305 (3%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
+ +EI+ + + N+ + +PNDPI Q IP+ EEL+ + DP+ D+ H
Sbjct: 13 KKEEIE--NKEFPFRSPLEFLNIADFDDPNDPILLQIIPKLEELDTVKGFNLDPVNDSQH 70
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ G++H+Y DR+LL CP++CR+CFR+ S + + EA L+YI+
Sbjct: 71 EKITGLIHKYHDRVLLLFSKHCPIHCRYCFRKGYNYSDN----NKQQIEAWLSYIESNHD 126
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I EVI +GGDPL ++ L + + IKH+ R HSR+P+V P ++ L ++ A
Sbjct: 127 IEEVILSGGDPLFVNSATLLDFVTRVSAIKHITRFRIHSRMPVVSPSLLDKNLANRIRRA 186
Query: 204 GKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
K + + IH+NH E ++E + ++S G I+L+ SVLLKGIND+ L +L R
Sbjct: 187 AKKDIDMILVIHSNHEKELTDEVVKSVSSFQAEGFIILNHSVLLKGINDNALTLKSLSRK 246
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ + + PYYL+ D G++HF + I L++ SG P + D G K+
Sbjct: 247 LIRMGVIPYYLNLLDKIEGSAHFFVEKNISLSIYQELQKISSGYLVPKLVQDN-GKDYKI 305
Query: 321 KIDTH 325
+ +
Sbjct: 306 ILGGN 310
>gi|224368753|ref|YP_002602914.1| KamA3 [Desulfobacterium autotrophicum HRM2]
gi|223691469|gb|ACN14752.1| KamA3 [Desulfobacterium autotrophicum HRM2]
Length = 440
Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats.
Identities = 87/388 (22%), Positives = 151/388 (38%), Gaps = 50/388 (12%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
M+ + T + + L N + EQI I+ + + N LIN + NDP+
Sbjct: 1 MRYKPYTNKNLKSLPQFNRLTPEQIFNIQVVGTVLPFKTNNYVVNELINWDDFENDPMFI 60
Query: 59 QFIPQKEEL--------------------------------NILPEERED-PIGDNNHSP 85
PQ+E L N P + D + +
Sbjct: 61 LNFPQREMLAKKHFNTMAALVKANASKERITMAANRIRHSLNPHPAGQIDKNVPVLDGQR 120
Query: 86 LKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L GI H+Y + +L C +C FCFR G + KD + + Y++ + +
Sbjct: 121 LNGIQHKYRETMLFFPTQGQTCHAFCSFCFRWPQFTGMDGHRFAMKDADLMVRYVRSQPE 180
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP------- 194
+ +++FTGGDPL +S K L L + + ++ +R ++ P R
Sbjct: 181 LTDILFTGGDPLTMSTKILSVYLNAIIDAKLPGIRTIRIGTKTLSFWPYRFTTDKDSAEL 240
Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
EL + + +AG + I H NHP E + E A+ + G ++ SQS +L IN +
Sbjct: 241 LELFKRVTDAGIHLAIMSHLNHPREIATPECKRAVEAIRGTGAVIRSQSPVLNRINASAK 300
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
I + + + + L I PYY+ +F + + + KI +SG+ +
Sbjct: 301 IWSKMWQDQISLGIVPYYMFVARNTGAQDYFSIPLVDTWKIFRDAYSSVSGISRTVRGPS 360
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDH 340
+ GK+KI I ++
Sbjct: 361 MSASPGKIKI--EGITEINEQKVIAMTF 386
>gi|15639115|ref|NP_218561.1| hypothetical protein TP0121 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025355|ref|YP_001933127.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum
SS14]
gi|4033488|sp|O83158|Y121_TREPA RecName: Full=Uncharacterized KamA family protein TP_0121
gi|3322385|gb|AAC65111.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189017930|gb|ACD70548.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum
SS14]
gi|291059540|gb|ADD72275.1| putative radical SAM domain protein [Treponema pallidum subsp.
pallidum str. Chicago]
Length = 355
Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 158/317 (49%), Gaps = 9/317 (2%)
Query: 39 LTPVIANLINPHNPNDP--IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
++P A+LI D + RQ +E + E DP+G++ + +VH+Y +R
Sbjct: 40 ISPAYAHLIAQAQGADAQALKRQVCFAPQERVVHACECADPLGEDRYCVTPFLVHQYANR 99
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L+ C +CR+CFRR + + G + + + E + Y++ + E++ +GGDPL
Sbjct: 100 VLMLATGRCFSHCRYCFRRGFIAQRAGWIPNEER-EKIITYLRATPSVKEILVSGGDPLT 158
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
S ++ + + LR + I+R +R PQ PELI L+E KPV+I H NHP
Sbjct: 159 GSFAQVTSLFRALRSVAPDLIIRLCTRAVTFAPQAFTPELIAFLQEM-KPVWIIPHINHP 217
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E A + AG+ + SQSVLL+G+ND E L L L +KP YL DL
Sbjct: 218 AELGSTQRAVLEACVGAGLPVQSQSVLLRGVNDSVETLCTLFHALTCLGVKPGYLFQLDL 277
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK-----VG 331
A GT FR+ + + + +LKE++SGL P +DLPGG GK + +++
Sbjct: 278 APGTGDFRVPLSDTLALWRTLKERLSGLSLPTLAVDLPGGGGKFPLVALALQQDVTWHQE 337
Query: 332 NGSYCITDHHNIVHDYP 348
++ + YP
Sbjct: 338 REAFSARGIDGAWYTYP 354
>gi|148244460|ref|YP_001219154.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA]
gi|146326287|dbj|BAF61430.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA]
Length = 314
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 92/281 (32%), Positives = 147/281 (52%), Gaps = 6/281 (2%)
Query: 34 HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
+ I + A LI+ N +DP+ +Q I K L+ P+ D +SP+ G++H+Y
Sbjct: 32 TFPIKIPMEFARLIDKRNKDDPLLKQVITPKN-LSKSTNFSLSPLEDEKYSPVAGLIHKY 90
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P+R+LL VC ++C+FCFR+ + + + YI +I EVI +GGD
Sbjct: 91 PNRVLLIASQVCAIHCQFCFRQNFNYVEHDAI---SNWVEIQNYIINDVKINEVILSGGD 147
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL LS +L ++ + +I+H++ LR H+R +V+P RI +L++ ++ + I +H
Sbjct: 148 PLSLSDDKLSTLIDNIAHIEHIKTLRVHTRNAVVEPSRITRKLVEIFNQSRLNIVIVLHI 207
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NH E S + I L + LLSQSVLL+G+ND E+L L + +L I PYYLH
Sbjct: 208 NHAQELSVQFAQKIIELTR--VTLLSQSVLLRGVNDSIEVLTELCLSLFDLGILPYYLHM 265
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
D G F + + ++ LK +SG P + D
Sbjct: 266 LDKVQGAQDFLVKDDYAIQLHQQLKSNLSGYLVPKLVRDSS 306
>gi|158335745|ref|YP_001516917.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina
MBIC11017]
gi|158305986|gb|ABW27603.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina
MBIC11017]
Length = 379
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 95/354 (26%), Positives = 163/354 (46%), Gaps = 17/354 (4%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q T+ + +E D I H+ + A LI+ +P DP+ +
Sbjct: 19 LQFSQTAATT-------LPLGEEDCDRITAAQTHFPFMVPEGYAQLIDWQDPTDPLRQLL 71
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + D G+ + + G+ H+Y +L + C +CR+CFRR ++
Sbjct: 72 LPSVYEQDDH--GSLDTSGETLSTVVPGLQHKYEQTAVLIVTQACAGHCRYCFRRRLMSK 129
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T + +D + A+AYIQ +I V+ +GGDP++ S +RL +L L I H+ +R
Sbjct: 130 DVMTKETIEDLQGAIAYIQTHPEIDNVLMSGGDPMVSSTRRLANLLAALAEIPHLWQIRI 189
Query: 181 HSRVPIVDPQRIN--PELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
+++P P R PEL+Q L + + H +HP E + A A++ L NAG +
Sbjct: 190 STKLPAFLPSRFTSDPELLQVLAQYQERFQIVFQCHFDHPREITPAAEQALAVLRNAGCL 249
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L +Q L++G+N +++ L + L + P YL HP HF+L I EG K+V
Sbjct: 250 LTAQIPLMQGVNSSVDVMETLFKRLHRLSVLPQYLFHPRPVKHALHFQLPILEGLKLVEG 309
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH-DYPP 349
L+++ +G + L +GK+++ + H DYP
Sbjct: 310 LRQRCNG-SVKRFRYILTHEHGKLELVG--LTPGPEPQLIGRWHQRRRGNDYPD 360
>gi|270264523|ref|ZP_06192789.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13]
gi|270041659|gb|EFA14757.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13]
Length = 449
Score = 260 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 81/393 (20%), Positives = 153/393 (38%), Gaps = 49/393 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + TL + E ++ +S+ + I + LI+ N P+DPI R
Sbjct: 6 KFQPYTLRNINQAPQWQNFTSEMRHSVEVLSHVLPFRVNQYILDELIDWDNIPDDPIFRL 65
Query: 60 FIPQKEELNILPE--------------------------EREDPIGDNNHS-------PL 86
P K+ L P G H+ PL
Sbjct: 66 TFPHKDMLRSEEFSQLSDAITRQAGDAELQMLVNKIRMRMNPHPAGQLTHNVPILDNEPL 125
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR +++++ + Y++ +++
Sbjct: 126 SGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMDELKFEARNSQMLVEYLKRHTEV 185
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195
+++ TGGDP+I++ + L ++ L + H++ +R ++ PQR +
Sbjct: 186 TDILITGGDPMIMNARALGDYIRPLLVPELSHIKNIRIGTKSVSYWPQRYLTDKDADDVL 245
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEEAIAA-ISRLANAGIILLSQSVLLKGINDDPEI 253
+ + + +G+ + + H NHP+E E + R+ + G + QS L++ IND+P+
Sbjct: 246 RIFEEVVASGRNLALMAHYNHPHEIQPEVAQRALKRIISTGATVRMQSPLIRHINDNPKD 305
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L T V L PYY+ +F + + +I + +SGL + +
Sbjct: 306 WATLWTTGVRLGAIPYYMFVERDTGPNDYFGMPLIRAWEIFQEAYKSVSGLARTVRGPSM 365
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GK+ ID G + + D
Sbjct: 366 SAFPGKIMIDGVVDIA-GEKVFALQFLQARNPD 397
>gi|167045081|gb|ABZ09744.1| putative Radical SAM superfamily protein [uncultured marine
crenarchaeote HF4000_APKG8I13]
Length = 449
Score = 260 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 80/393 (20%), Positives = 146/393 (37%), Gaps = 50/393 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
++ TL + + + + KE E++ + N + LI+ N PNDP+
Sbjct: 16 IKSYTLMNFRIIPQIQQMSKEDQFEMEVVGNVLPFKTNNYVVEQLIDWDNVPNDPMYVLT 75
Query: 61 IPQKEELNILPEE--------------------------REDPIGDN--------NHSPL 86
PQK L + P G + + L
Sbjct: 76 FPQKGMLIPEHYDKMASTLSSGADKKEVQRVANDIRLQLNPHPAGQMELNVPQLRDGTKL 135
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR + ++ E + Y++E +I
Sbjct: 136 YGMQHKYDETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMREGEQLVQYLKEHPEI 195
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI--------NP 194
+V+FTGGDP+I+ L + +++ +R ++ P +
Sbjct: 196 SDVLFTGGDPMIMKASMFSVYTDALLDAKLPNLKTIRIGTKAISYWPYKFLTDSDADETL 255
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ + + E+G + I H NH E ++ A+ R+ G + +QS LL INDD ++
Sbjct: 256 KNFEKIVESGTHLAIMAHFNHLVELSTDPIKEAVKRIRKTGAQIRTQSPLLAHINDDTDM 315
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + + V L PYY+ +F + + + +KI ++SGL + +
Sbjct: 316 WAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRDAFRQVSGLARTVRGPSM 375
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GKV + + G + +
Sbjct: 376 SATPGKVHVLGVSEI-NGQKVIVLQLLQGRESE 407
>gi|167042471|gb|ABZ07196.1| putative Radical SAM superfamily protein [uncultured marine
crenarchaeote HF4000_ANIW133C7]
Length = 447
Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 80/393 (20%), Positives = 147/393 (37%), Gaps = 50/393 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
++ TL + + + + +E E++ + N + LI+ N PNDP+
Sbjct: 16 IKTYTLINFRKIPQIQQMPEEVQFEMEVVGNVLPFKTNNYVVEQLIDWDNIPNDPMYVLT 75
Query: 61 IPQKEELNILPEE--------------------------REDPIGDN--------NHSPL 86
PQK L + P G + + L
Sbjct: 76 FPQKGMLIPEHYDKMASTLRSGADKKEIARVANDIRLQLNPHPAGQMELNVPQLKDGTKL 135
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR + ++ E + Y++E ++
Sbjct: 136 YGMQHKYDETCLFFPSQSQTCHAYCTFCFRWPQFVGMDEMKFAMREGEQLVQYLKEHPEV 195
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI--------NP 194
+V+FTGGDP+I+ TL + +++ +R ++ P +
Sbjct: 196 TDVLFTGGDPMIMKASMFSAYTDTLLDAKLPNLKTIRIGTKAISYWPYKFLTDSDADETL 255
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ + + ++G + I H NH E ++ AI R+ G + +QS LL INDD +
Sbjct: 256 KNFEKIVKSGTHLAIMAHFNHLVELSTDPIKEAIKRIRKTGAQIRTQSPLLAHINDDSSM 315
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + + V L PYY+ +F + + + +KI S ++SGL + +
Sbjct: 316 WAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRSAFRQVSGLARTVRGPSM 375
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GKV + + G + +
Sbjct: 376 SATPGKVHVLGVSEI-NGQKVIVLQLLQGRESE 407
>gi|271970119|ref|YP_003344315.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021]
gi|270513294|gb|ACZ91572.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021]
Length = 461
Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats.
Identities = 83/381 (21%), Positives = 155/381 (40%), Gaps = 48/381 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
R T DL + E+ I+ ++ + + LI+ P+DPI R
Sbjct: 11 FRAYTAKHLDDLLLRAGLGDEERLRIRAVATVLPFRTNAYVVDQLIDWSAIPDDPIYRLV 70
Query: 61 IPQKEE--------------------------------LNILPEERED-PIGDNNHSPLK 87
PQ + LN P + D + P+
Sbjct: 71 FPQADMLPEPDVTRLAGLLRAGAPNAEIQAAAREVRMRLNPHPAGQLDLNVPRVGEDPMP 130
Query: 88 GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+YP+ +L C YC +CFR + +S D + + Y+++ ++
Sbjct: 131 GMQHKYPETVLFFPKQGQTCHAYCTYCFRWAQFIGEPDLKFASDDVDNLVGYLKKHPRVT 190
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELI 197
V+FTGGDP+I+S L++ L+ L ++ ++ +R ++ PQR L
Sbjct: 191 SVLFTGGDPMIMSESVLRRYLEPLLELEQLESIRIGTKSLAYWPQRFVSDPDAADTLRLF 250
Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ +AGK + H +HP E S A AA++ + G ++ +Q+ L++ INDDP ++
Sbjct: 251 ASVVDAGKNLAFMAHFSHPREMESPVAEAAVAGILATGAVIRTQAPLIRTINDDPATWSS 310
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
+ R + + + PYY+ +F + + +I +SGLC+ +
Sbjct: 311 MWRRQLTMGMVPYYMFVERDTGPQDYFAVPLARAHEIFRDAYASVSGLCRTVRGPSMSAT 370
Query: 317 YGKVKIDTHNIKKVGNGSYCI 337
GKV + + ++ +
Sbjct: 371 PGKVCV--DGVAEIAGQKVFV 389
>gi|312602176|ref|YP_004022021.1| lysine2,3-aminomutase [Burkholderia rhizoxinica HKI 454]
gi|312169490|emb|CBW76502.1| LYSINE 2,3-AMINOMUTASE (EC 5.4.3.2) [Burkholderia rhizoxinica HKI
454]
Length = 459
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 91/393 (23%), Positives = 156/393 (39%), Gaps = 49/393 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T S Q + + + + +K IS + + LIN P+DPI R
Sbjct: 9 KFKPYTRQSIQQAHQWATLPENLREAVKVISRVLPFRTNQYVLDTLINWERVPDDPIYRL 68
Query: 60 FIPQKEELNILPE--------------------------EREDPIGDNNHSP-------L 86
P + L P G H+ +
Sbjct: 69 TFPHSDMLPADEYATLRDLVLIKQDEAAIENEVRKIRMRMNPHPAGQMTHNVPILDGKRM 128
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR +G +K + +AY++ +++
Sbjct: 129 HGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMEGLKFDAKASNELVAYLRRHTEV 188
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195
+V+ TGGDPLI++ + L ++ L + H+Q +R ++ PQR +
Sbjct: 189 TDVLITGGDPLIMNTRSLADYIEPLLSPELAHIQNIRIGTKSVAYWPQRFVTDKDADDLL 248
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + + AGK + + H NHP E + A A+ R+ ++G L QS L++ INDD +
Sbjct: 249 WLFEKVVNAGKNLAVMGHYNHPVELRPDIAQKAVKRIVSSGATLRMQSPLIRHINDDAKA 308
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L T V L PYY+ +F+L + + +I + + +SGL + +
Sbjct: 309 WAELWTTGVRLGAIPYYMFIERDTGPRQYFQLPLIKSYEIFQAAYQSVSGLSRTVRGPSM 368
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
GKV +D G + + D
Sbjct: 369 SAFPGKVVVDGIATI-QGEKVFALQFLQARNPD 400
>gi|182412197|ref|YP_001817263.1| radical SAM domain-containing protein [Opitutus terrae PB90-1]
gi|177839411|gb|ACB73663.1| Radical SAM domain protein [Opitutus terrae PB90-1]
Length = 468
Score = 257 bits (658), Expect = 2e-66, Method: Composition-based stats.
Identities = 83/398 (20%), Positives = 155/398 (38%), Gaps = 54/398 (13%)
Query: 2 QLRHKTLT-----SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PND 54
+++ + + + + + ++ ++ + + LI+ +N P D
Sbjct: 6 RIKARPFRVYQRADLPRIPQLQRLPADTLLAMRAVAAVLPFRVNQYVVEELIDWNNLPAD 65
Query: 55 PIARQFIPQKEELNILP--------------------------EEREDPIGDNNHS---- 84
P+ + PQ L P G +
Sbjct: 66 PMFQLTFPQPGMLAEADLAKMMRLLADGADQPTIERAARQIQRRLNPHPAGQMELNVPYF 125
Query: 85 ---PLKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
PL G+ H+Y D +L C YC +CFR +S+ E+ +AY++
Sbjct: 126 DGQPLSGMQHKYRDTVLFFPSPGQTCHTYCTYCFRWPQFVGLDELKFASRQAESLVAYLK 185
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-- 195
E ++ V+FTGGDPL++ L++ ++ L ++H+ +R ++ P P R E
Sbjct: 186 EHPEVSNVLFTGGDPLVMRTAVLRRYIEPLLSPELEHISAIRIGTKSPAWWPYRFVNEPD 245
Query: 196 ------LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIN 248
L ++ AG+ + I H + P E + A AA+ R+ + G I+ Q+ L++ +N
Sbjct: 246 SDDLLRLFDQVRAAGRHMAIMAHYSRPRELQTPVAQAALRRIKSTGAIVRCQAPLIRHVN 305
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
DD + A+L R V L PYY+ +F + + +I ++SGL +
Sbjct: 306 DDADTWADLWRLQVRLGAVPYYMFVERDTGPKGYFEVPLARCYEIFQKAYRRVSGLERTV 365
Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ GKV ID + G + + D
Sbjct: 366 RGPSMSATPGKVIIDG-VTELQGEKVFSLRFVQAREPD 402
>gi|288916751|ref|ZP_06411125.1| conserved hypothetical protein [Frankia sp. EUN1f]
gi|288351825|gb|EFC86028.1| conserved hypothetical protein [Frankia sp. EUN1f]
Length = 457
Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats.
Identities = 72/381 (18%), Positives = 150/381 (39%), Gaps = 50/381 (13%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL 67
S L + + ++ + + + LI+ P+DPI R PQ + L
Sbjct: 23 SLDGLLERAGLAGPDRLMARAVAAVLPFRVNDYVVDALIDWDAAPDDPIYRLVFPQPDML 82
Query: 68 --------------------------------NILPEERED-PIGDNNHSPLKGIVHRYP 94
N P + + + + + L G+ H+YP
Sbjct: 83 PAEQVAPIAQLLARGAPTREVQAAAAAVRAALNPHPAGQRELNVPELAGTRLDGLQHKYP 142
Query: 95 DRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+ +L H C YC +CFR + ++S++ + + Y++ ++ +V+ TGG
Sbjct: 143 ETVLYFPAHGQTCHAYCTYCFRWAQFVQEPHLRMASRNVDDLVTYVRAHPEVTDVLITGG 202
Query: 153 DPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRI--------NPELIQCLK 201
DP+++S + L + + L H+Q +R ++ P R L + +
Sbjct: 203 DPMVMSAEMLARCVLPLLDEPGLGHLQSIRIGTKSLSYWPARFVTDPGADDTLRLFERVV 262
Query: 202 EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
+G+ + + H +HP E ++ A A+ R+ + G ++ +Q +++ +NDD A + +
Sbjct: 263 ASGRSLALMAHYSHPRELETDVAEHAVRRVLSTGAVIRTQGPVIRSVNDDAGAWAAMWQR 322
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
V L + PYY+ +F + + +I ++ +SGL + + GKV
Sbjct: 323 QVRLGMVPYYMFVERDTGPRGYFEVALLRAYEIFSAAYRSVSGLARTVRGPVMSATPGKV 382
Query: 321 KIDTHNIKKVGNGSYCITDHH 341
+D + +
Sbjct: 383 VVDGVHTVG-AEKYIALRFLQ 402
>gi|256376813|ref|YP_003100473.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
gi|255921116|gb|ACU36627.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
Length = 450
Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 76/391 (19%), Positives = 155/391 (39%), Gaps = 50/391 (12%)
Query: 4 RHKTL--TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
R ++L ++ + + ++ ++ IS + + + LI+ PNDPI +
Sbjct: 13 RFRSLGPHHVDEVAARYAPRADLMEAVRVISQVLPFRVNEYVLSHLIDWARVPNDPIFQL 72
Query: 60 FIPQKEELNILPE-------------------------EREDPIGDNNHSPL-------K 87
PQ+ L E P G +
Sbjct: 73 VFPQRGMLAEDDERELADLLRAKDKRGLRLAVERVRGGLNPHPAGQKELNVPMLDGEVLP 132
Query: 88 GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + L C YC +CFR ++ E + Y+++ +
Sbjct: 133 GVQHKYRETALYFPQQGQTCHAYCTYCFRWAQFVGDADLRFAAPGPELLVRYLRQHPAVT 192
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197
+V+ TGGDP+I+S +RL+ L+ L + V+ +R ++ P R + L
Sbjct: 193 DVLVTGGDPMIMSTERLRSHLEPLLAVDTVRTIRIGTKSVAYWPHRFTTDPDADEVLRLF 252
Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ + +G+ + + H +HP E +++A AA++R+ G ++ Q+ L+K +NDD + A+
Sbjct: 253 ERVVASGRSLAVMAHFSHPRELETDQARAALARIRATGAVVYCQAPLIKHVNDDSRVWAD 312
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
+ R + + PYY+ +F++ + I + GL + +
Sbjct: 313 MWRGELSAGLVPYYMFVERDTGPREYFKVPLARAVDIFQGAYRTLPGLARTVRGPSMSAT 372
Query: 317 YGKVKIDTHNIKKVGNGS-YCITDHHNIVHD 346
GKV + ++ +G + + V +
Sbjct: 373 PGKVLV--DGVEDAPDGKHFRLRMVQARVPE 401
>gi|90423562|ref|YP_531932.1| radical SAM family protein [Rhodopseudomonas palustris BisB18]
gi|90105576|gb|ABD87613.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18]
Length = 480
Score = 252 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 80/363 (22%), Positives = 149/363 (41%), Gaps = 48/363 (13%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEEL 67
+ +L + + EI ++ + NLI+ P+DPI + PQ+ L
Sbjct: 22 NLSELPEWQRLDAQLRREIDIVARVLPFRTNRYVVENLIDWSRVPDDPIFQLVFPQRGML 81
Query: 68 NILPEE--------------------------REDPIGDNNHS-------PLKGIVHRYP 94
+ + + P G H+ PL G+ H+Y
Sbjct: 82 SEVDFDDVRTLVESSDDSEALARAVERIRRRLNPHPGGQLTHNTATLAGRPLPGVQHKYR 141
Query: 95 DRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+ ++ C YC +CFR +G + ++ T +AY++ +I +V+ TGG
Sbjct: 142 ETVVFFPAQGQTCHAYCTYCFRWAQFVGMQGMRIETRSTSELVAYLRAHPEITDVLITGG 201
Query: 153 DPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKE 202
DP+I++ + L++ ++ L + H+Q +R ++ P R + L + +
Sbjct: 202 DPMIMATRTLRRYIEPLLVPELSHIQNIRIGTKSVAYWPHRFVSDADADDCLRLFEEVAA 261
Query: 203 AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
A + + I H HP E A AI R+ + G + Q+ L++ +ND PE+ + L RT
Sbjct: 262 ANRHLAIMGHYTHPVELHPALAREAIRRIRDTGAQIRMQAPLIRHVNDAPELWSELWRTG 321
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
V L + PYY+ +F + + +I +SGL + + GK++
Sbjct: 322 VRLGLIPYYMFIERDTGPRDYFSVPLVRAHEIFRRAAANVSGLARAAQGPTMSVLPGKIR 381
Query: 322 IDT 324
I
Sbjct: 382 ILG 384
>gi|148255106|ref|YP_001239691.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
gi|146407279|gb|ABQ35785.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
Length = 460
Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats.
Identities = 81/388 (20%), Positives = 153/388 (39%), Gaps = 47/388 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQF 60
L+ L L I + +++ + + + + LI+ P+ DP R
Sbjct: 29 LKLYGLQHIDILRRYRDIPDRALHDMRVVGQVLPFRVNNYVLDELIDWAEPDEDPFYRLT 88
Query: 61 IPQKEELNILPEERED-------------------------------PIGDNNHSPLKGI 89
+ + L+ + + + + S + G+
Sbjct: 89 MLDRHMLDPADFDALERALRVGGSAPVEVTAAIHRRFNPHPGRQMTMNMPELGGSGVSGL 148
Query: 90 VHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
H+Y + L+ C YC FCFR + +++ +++ +AYI+E +I +V
Sbjct: 149 QHKYAETCLVFPASGQTCAAYCSFCFRWPQFIGNRDLRMATDESQRFVAYIKEHKEISDV 208
Query: 148 IFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQC------ 199
+ TGGDPLI+ L++ L L + HV +R +++ P R +
Sbjct: 209 LLTGGDPLIMRASVLRRYLLPLLGADLAHVTTIRIGTKMLGFWPYRFTTDDDADDLIALL 268
Query: 200 --LKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ +G+ + I +H +HP E + A A+ RL + G +L SQS +++G+NDD I
Sbjct: 269 EEVVRSGRHLAIMLHISHPRELETAAARRAVQRLLSTGAVLRSQSPVVRGVNDDARIWQE 328
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L V I PYY+ + F + + +I ++SGL + +
Sbjct: 329 LWSREVRQGIVPYYMFVLRDTGPRAFFEVPLARALEIYRGGIRQVSGLARSARGPIMSTD 388
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNIV 344
GKV +D G S+ ++ +
Sbjct: 389 MGKVAVDGVADMG-GTRSFVLSYVQARI 415
>gi|107027427|ref|YP_624938.1| hypothetical protein Bcen_5091 [Burkholderia cenocepacia AU 1054]
gi|116693862|ref|YP_839395.1| lysine 2,3-aminomutase YodO family protein [Burkholderia
cenocepacia HI2424]
gi|105896801|gb|ABF79965.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia AU 1054]
gi|116651862|gb|ABK12502.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia HI2424]
Length = 396
Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats.
Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 24/365 (6%)
Query: 2 QLRHKTLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLINPH----NPN--- 53
Q R+ T+ L A E I+ N + +TP LI + +
Sbjct: 32 QQRN-TIREEASLREACGGWSDELSSHIQSNLNGRKLQITPYYLRLIRESQGDTDADIVR 90
Query: 54 DPIARQFIPQ-KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+P+ RQ +P +E+ + + + H+Y +R++L++++ C YC+FC
Sbjct: 91 NPLWRQVVPFWSDEIVGGYDGESENWELAHEMKTPICQHKYDNRVILRMVNTCNSYCQFC 150
Query: 113 FR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
F R + + + T S ++AYI++ I EVI +GGDPL+LS +L + L LR
Sbjct: 151 FEALRTLEVNSEKTNASRDTFGESVAYIKQNPAIEEVILSGGDPLMLSDAKLDEHLSALR 210
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ ++R HSR +P R+ +L+ L+ +H HP E S A+ R+
Sbjct: 211 DVGRDLLIRIHSRSLTFNPYRVTDQLVAMLERHRVN-AFGVHVCHPDELSPAFTDAVKRI 269
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEE 289
+A I+ S L+GINDD E L L +KPYYL+H + G S ++ +I +
Sbjct: 270 RSAVPIVFSNMPFLRGINDDEETLHRLFIELYRRGVKPYYLYHFMPFSPGASVYKASIRD 329
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHH 341
+I+ LK ++S + P Y+ LP GK V + ++ Y +
Sbjct: 330 AIRIMNRLKRRVSNVAMPEYV--LPHAKGKFTVPLFEGQGDIPQFVETGEQRIYRFVNWQ 387
Query: 342 NIVHD 346
D
Sbjct: 388 GETCD 392
>gi|167947045|ref|ZP_02534119.1| hypothetical protein Epers_11032 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 316
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 152/269 (56%), Gaps = 8/269 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + S L + + +++ + ++E+ + + + +L+N ++ NDPI + +P ++
Sbjct: 23 QNINSIDSLKHYIDLSEDEEEVLREVVGQHPMNIPRYYLSLLNEYDTNDPIRKLALPSED 82
Query: 66 ELNILPEE---REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL + +DP GD+ H+ G++H+YP L+ C +YCR CFR+ +VG
Sbjct: 83 ELIVAGSMGETTKDPYGDDKHNKGNGVLHKYPYSALIVATDYCSMYCRHCFRKAIVGLPN 142
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ ++ + A YI+E +I VI +GGDPL+++ +R++K+L++L I HV +R +
Sbjct: 143 DKTV--ENFQRAATYIREHKEITNVIISGGDPLLINTRRIKKILESLVDIDHVNYVRLGT 200
Query: 183 RVPIVDPQR-INPELIQCLKEAGKP--VYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
R P+V P R + +L++C +E K +Y+ H NH E + A A+ R+ G+ + +
Sbjct: 201 RTPVVYPMRFFDDDLLKCFEEFNKHKTLYLPTHFNHANEITNIAKEAVLRIRQTGVTVNN 260
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKP 268
Q+VLL+G+ND + NLM V + KP
Sbjct: 261 QAVLLEGVNDSASDIENLMNGLVTIWRKP 289
>gi|169608816|ref|XP_001797827.1| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15]
gi|160701722|gb|EAT84959.2| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15]
Length = 487
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 90/353 (25%), Positives = 155/353 (43%), Gaps = 53/353 (15%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDPIARQFIPQKE-ELNI 69
L K+ I++ + + +TP + + I+ +NP +DPI +QFIP +
Sbjct: 61 LLRKITHKEAFIEDAVAATKLAPMAIRITPHVLSRIDWNNPLDDPIRKQFIPLASCIIPD 120
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
+ D + + S +YCRFC R VG TV
Sbjct: 121 HEHLKLDSLEEEKDS----------------------LYCRFCTRSYAVGGGTDTVTKRP 158
Query: 130 D------TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
E Y++ + +++ +GGD L + L ++ + L ++ +++ +RF S+
Sbjct: 159 QKPSLTRWEKVFEYVENCKDLKDIVVSGGDAYYLQPEDLLRMGRRLLHMDNIERVRFASK 218
Query: 184 VPIVDPQRINP---------ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
V P RI EL + GK V + H NHP E + A + L G
Sbjct: 219 GLAVAPGRICEGDPWTEALIELSNLGRSLGKQVCLHTHINHPREITWVTKTAANYLFKHG 278
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+I+ +QSVLLKG+N+DP I+++L++ + I+PYY++ D+ G R ++E +
Sbjct: 279 VIVRNQSVLLKGVNNDPVIMSDLIQGLSSINIQPYYVYQCDMVQGIEDLRTPLQEIIDLD 338
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
L+ +SG P +++DLPGG GK + + + N V Y
Sbjct: 339 KQLRGTLSGFMMPAFVIDLPGGGGKRLVS------------TMESYENGVATY 379
>gi|224007663|ref|XP_002292791.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana
CCMP1335]
gi|220971653|gb|EED89987.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana
CCMP1335]
Length = 533
Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats.
Identities = 76/390 (19%), Positives = 153/390 (39%), Gaps = 51/390 (13%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN---DPIA 57
+ + +L + + + + ++K + +P + LI+ + + DP
Sbjct: 96 RYKAISLQAVDKVAERHPALLPHLYDVKLAGMVFPFKASPYYVDELIDWESEDVRQDPFY 155
Query: 58 RQFIPQKEELNILPEEREDPIGDNNH---------------SPLK--------------- 87
R P + L+ + + + +P
Sbjct: 156 RLVFPTLDMLSDEHRMKLEAAYEEGDPKNLIRTVEEIRSDLNPHPAGQKTLNAPKDDSLT 215
Query: 88 GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L+ C YC +CFR + K+ ++ Y+ + ++
Sbjct: 216 GVQHKYSETVLVFPSAGQTCHAYCTYCFRWAQFIGDDELRFAQKEAKSLFDYLSKHEEVS 275
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRIN-----PELI 197
+++ TGGDP+++ K L + L+ L + H++ +R +R PQR E+I
Sbjct: 276 DILMTGGDPMVMKTKSLARYLEPLTDPNFLPHIKNIRIGTRSLSFWPQRFTTDDDADEVI 335
Query: 198 QCLKE----AGKPVYIAIHANHPYEF-SEEAIAAISRLAN-AGIILLSQSVLLKGINDDP 251
+ L+ G+ V + H +H E +++ AAI R+ A + SQS +++GIND
Sbjct: 336 ELLRRVREEGGRHVAVMAHLSHARELSTDKVKAAIQRIQKEAFATIRSQSPVMRGINDSS 395
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
++ A RT V + I PYY+ F + + KI + SGL +
Sbjct: 396 DVWAEKWRTEVNMGIIPYYMFLARDTGAQQFFDVPMATAHKIYSDALRNCSGLIRTARGP 455
Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ GKV++ +G ++ +
Sbjct: 456 SMSCTPGKVEVTGVEEI-MGQKAFVLRFLQ 484
>gi|302531882|ref|ZP_07284224.1| lysine 2,3-aminomutase [Streptomyces sp. AA4]
gi|302440777|gb|EFL12593.1| lysine 2,3-aminomutase [Streptomyces sp. AA4]
Length = 460
Score = 248 bits (634), Expect = 9e-64, Method: Composition-based stats.
Identities = 73/376 (19%), Positives = 151/376 (40%), Gaps = 49/376 (13%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL---- 67
+ + + +I +S+ + + + LI+ P+DPI R P K+ L
Sbjct: 44 IPQVRSLGPDIRRDISVVSSVLPFKVNNYVVDELIDWSAVPDDPIFRLTFPHKDMLPADM 103
Query: 68 ----------------------------NILPEERE-DPIGDNNHSPLKGIVHRYPDRIL 98
N P ++ + + ++G+ H+Y + +L
Sbjct: 104 YDEVAALQARGLRPAELRRAVAPMRERLNPHPGDQLTKNVPQDGSGVVRGLQHKYAETVL 163
Query: 99 LKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ H C YC +CFR G D + + Y++ ++ +V+FTGGDP+I
Sbjct: 164 VFPSHGQTCHAYCGYCFRWAQFVGMPGLKQQVDDNDRIVDYLRSHREVSDVLFTGGDPMI 223
Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKP 206
++ L++ ++ L +H++ RF ++ P R + L + + +G+
Sbjct: 224 MTTDVLRQYVEPLLGPGFEHLRNFRFGTKALSYWPYRFTTDPDSDDLLRLFEQIVGSGRH 283
Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
V + H +H E ++ A+ R+ + G ++ Q+ +++ +ND+ A + R V L
Sbjct: 284 VAVMAHFSHARELGTDAVARAMRRIRDTGAVVRVQAPIVRHVNDNAPAWAEMWRQSVRLG 343
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
PYY+ +F L + + I +++SGL + + GKV +D
Sbjct: 344 AVPYYMFVERDTGAREYFALPLAQVVDIYRDAFKQVSGLERTARGPVMSASPGKVALDGV 403
Query: 326 NIKKVGNGSYCITDHH 341
G+ ++
Sbjct: 404 ADI-WGSKAFVCRFLQ 418
>gi|302340485|ref|YP_003805691.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM
11293]
gi|301637670|gb|ADK83097.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM
11293]
Length = 461
Score = 247 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 76/393 (19%), Positives = 150/393 (38%), Gaps = 51/393 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R + + + + K Q+ E++ ++ + LI+ P DP+ +
Sbjct: 5 RFRPYSAANIDSITQLKRLPKSQLREMQAVAKILPFRTNNYVVEELIDWSRIPEDPLFQL 64
Query: 60 FIPQKEELN----------------------------------ILPEERED-PIGDNNHS 84
PQ + L+ P + + +
Sbjct: 65 TFPQPQMLHKSDLRRITELLATETGYSPEQLKSEQYRIRTAMNPHPAGQLQLNVPEEEGE 124
Query: 85 PLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
L G+ H+Y + +L C YC +CFR K ++S + E + Y+
Sbjct: 125 VLHGMQHKYDETVLFFPKQGQTCHAYCTYCFRWAQFIGNKELQMASGEVEPLIRYLDRHP 184
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPE----- 195
++ +++ TGGDP+ + L++ ++ L + ++Q +R ++ P R +
Sbjct: 185 EVSDLLITGGDPMFMRSSVLRRYIEPLLRHRPGNLQTIRIGTKSLSYWPYRYLSDKDSDD 244
Query: 196 ---LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
L + AG + I H H E + AAI R+ G I+ QS +++ INDD
Sbjct: 245 LISLFHEITTAGYHLSIMAHFTHIRELSTLAVEAAIRRIKETGAIIRCQSPIVRHINDDA 304
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
+ A + R V+L + PYY+ ++F + I E K+ + ++SGL +
Sbjct: 305 SMWAEMWRREVQLGMIPYYMFIARDTGPKAYFDIPIAETLKLFSDAYRQVSGLARTVRGP 364
Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
+ GK+ +D + G + +
Sbjct: 365 SMSAKPGKILVDGITEIE-GEKYFVLKMIQGRE 396
>gi|323456908|gb|EGB12774.1| hypothetical protein AURANDRAFT_70598 [Aureococcus anophagefferens]
Length = 1879
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 84/368 (22%), Positives = 149/368 (40%), Gaps = 55/368 (14%)
Query: 4 RHKTLTSAQDLYNANLIKK---EQIDEIKEISNHYSIALTPVIAN-LINPHNPND----P 55
R + + S + E + ++K + + +P + + LI+ D P
Sbjct: 773 RFRAI-SLAAIDQWGEKYPRLQENMQDVKRAALIFPFKASPYLVDELIDWDMEADIRTDP 831
Query: 56 IARQFIPQKEELNILPEERED-------------------------PIGDNNHSPLK--- 87
+ P + L+ E D P G + K
Sbjct: 832 FYKLVFPTMDMLSDEHRELLDGVCDAGDPAAIKEAVEEIRESLNPHPAGQKALNAPKKAE 891
Query: 88 --GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G+ H+Y + +L C YC +CFR + KD ++ Y++E +
Sbjct: 892 LTGVQHKYAETVLFFAAAAQTCHAYCTYCFRWAQFIGDPDLRFAQKDADSLFDYLEEHPE 951
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRIN-----PE 195
+ +++FTGGDP+I+ + L++ L+ + + H++ LR +R PQR E
Sbjct: 952 VSDILFTGGDPMIMQTRMLKQYLEPFKDPTHLPHIKNLRIGTRALTFWPQRFTTDADADE 1011
Query: 196 LIQCLKE----AGKPVYIAIHANHPYEF-SEEAIAAISRL-ANAGIILLSQSVLLKGIND 249
L+ L+E G+ + I H H E +++ AI RL G+I+ SQS +++GIND
Sbjct: 1012 LMTLLREVKEIGGRHMAIMAHLGHVRELSTDKVKHAIHRLKQEGGVIIRSQSPVMRGIND 1071
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D ++ A R V L + PYY+ S+F + + Q++ A SGLC+
Sbjct: 1072 DADVWAAKWREEVRLGVIPYYMFIARDTGAQSYFDVPLVRAQRLYADAIRATSGLCRTAR 1131
Query: 310 ILDLPGGY 317
+
Sbjct: 1132 GPSMSCTP 1139
>gi|148252209|ref|YP_001236794.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
gi|146404382|gb|ABQ32888.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
Length = 485
Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats.
Identities = 79/388 (20%), Positives = 146/388 (37%), Gaps = 47/388 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59
+L + T + + + I + + + + NLI+ P+DP+ R
Sbjct: 40 RLIYYTNHRLSQVPQLKSLPPRLVRGIHLAAMVFPFKVNSYVLDNLIDWGAAPDDPMFRL 99
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPL-------------------------------KG 88
P + L E D + + +G
Sbjct: 100 VFPHPDMLQDGDREVLDDLLERGDEVAIAAEVQRIRADMNPHSSDQIVNVPLFEGASLEG 159
Query: 89 IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+ H+Y + L C YC FCFR ++D E AY++ + I +
Sbjct: 160 VQHKYDETALFFAKQGQTCHSYCSFCFRWPQFVDSAVDRFEARDGERLYAYLRTRRDITD 219
Query: 147 VIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRIN--------PEL 196
V+ TGGDP ++S +RL L+ L HV +R ++ PQR L
Sbjct: 220 VLLTGGDPFVMSSRRLADYLEPLLAPEFSHVTNIRIGTKALSYWPQRFYVGAEAEELNRL 279
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + ++GK V + H NH E + E A+ L +G ++ +QS +L+ +NDD +
Sbjct: 280 LVRVADSGKQVAVMAHVNHWRELTPEPVHRAVEALRRSGAVIRTQSPVLRHVNDDVAVWR 339
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
R V + + PYY+ +FR++++ I + +SG+C+ +
Sbjct: 340 RNWRDQVAMGMIPYYMFVERDTGANHYFRISLDRALAIYQAAAAAVSGICRTARGPVMSA 399
Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNI 343
G GK+ + + + ++
Sbjct: 400 GPGKIHVLGRLAIG-NDDYFVLSFLQAR 426
>gi|307133226|ref|YP_003885242.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937]
gi|306530755|gb|ADN00686.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937]
Length = 386
Score = 245 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 95/362 (26%), Positives = 163/362 (45%), Gaps = 21/362 (5%)
Query: 2 QLRHKTLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND----PI 56
Q ++ + L +A +E I + +TP ANLI D P+
Sbjct: 25 QQKN-AIRDEPALRSACGGWSEEVAQHIANNLKDRKMQITPYYANLIRQAAYTDIVDNPL 83
Query: 57 ARQFIPQKEELNILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFR- 114
RQ +P + + + E + +H H+Y +R++L++++ C YC+FCF
Sbjct: 84 WRQVVPFWHDDGVTGYDGESENWELSHEMKTPICQHKYDNRVILRMVNTCNSYCQFCFEA 143
Query: 115 -REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
R + + K + +L YI++ ++ EVI +GGDP++L+ +L + L +R I+
Sbjct: 144 LRTLKVDSEKENAGRKAFQDSLDYIRQTPEVEEVILSGGDPMMLTDAKLDECLGAIRNIR 203
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
++R HSR +P RI L+ L+ +H HP E S+ A+ R+
Sbjct: 204 DSLLIRIHSRSLTFNPYRITDTLLDILQRHRVN-AFGVHVCHPLELSDAFRDAVKRIQQV 262
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEGQK 292
I+ S LL+G+ND+ E L +L + +KPYYL+H + G S ++ +I +
Sbjct: 263 VPIVFSNMPLLRGVNDNEETLKSLFIELYRMGVKPYYLYHFMPFSPGASEYKASIRDAIA 322
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHHNIV 344
I+ LK ++S + P Y+ LP GK V + G Y T+ V
Sbjct: 323 IMNRLKRRVSNIALPEYV--LPHAKGKFTVPLLSGVEEMPQFEDIDGRRFYRFTNWQGDV 380
Query: 345 HD 346
Sbjct: 381 CR 382
>gi|256394391|ref|YP_003115955.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928]
gi|256360617|gb|ACU74114.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928]
Length = 441
Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats.
Identities = 75/378 (19%), Positives = 145/378 (38%), Gaps = 45/378 (11%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQFIPQKEEL- 67
++ + + + ++ S + + + LI+ P+ DP+ F PQ L
Sbjct: 22 LDEIAAKYGLDPQLRESVRLFSLVLPFRVNEYVLSELIDWSAPDADPVFHLFFPQPGMLS 81
Query: 68 ------------------------------NILPEERED-PIGDNNHSPLKGIVHRYPDR 96
N PE ++D + + PL G H+Y
Sbjct: 82 PEDEQRLTAARDGGDAGELARTIAAIRAGMNPHPEHQQDLNVPSDPDGPLPGTQHKYEQT 141
Query: 97 ILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+L C YC +CFR + S+ D A+AY++ ++ +V+ TGGDP
Sbjct: 142 LLYFPAAGQTCHAYCTYCFRWAQFVGEPELRFSAADPARAVAYLRRHPEVTDVLVTGGDP 201
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKP 206
++++ +RL++ L+ ++ +Q +R ++ P R L + + EAGK
Sbjct: 202 MVMTAERLRQHLEPFLAVESLQTVRIGTKSVASWPHRYVSDHDADATLRLFEQIAEAGKT 261
Query: 207 VYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ H +HP E A A+SR+ + G ++ Q+ ++ +NDD A L R
Sbjct: 262 PALMAHLSHPVELEPAIARTALSRIRDTGALVYCQAPIIGRVNDDAAAWARLWRAEQRAG 321
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
PYY+ +F++ + ++ + GL + + GKV +D
Sbjct: 322 AVPYYMFVARDTGPRDYFKVPLARAAEVFRDAYSALPGLARTVRGPVMSTTGGKVVVDGV 381
Query: 326 NIKKVGNGSYCITDHHNI 343
+ + +
Sbjct: 382 AEEPGAGRFFELRYLQAR 399
>gi|27383343|ref|NP_774872.1| hypothetical protein bll8232 [Bradyrhizobium japonicum USDA 110]
gi|27356518|dbj|BAC53497.1| bll8232 [Bradyrhizobium japonicum USDA 110]
Length = 499
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 88/312 (28%), Positives = 147/312 (47%), Gaps = 15/312 (4%)
Query: 40 TPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL 99
T + I D + P E D G+++++ + G+ H+Y LL
Sbjct: 175 TNFYRDQITNSGYYDQLKYIVEPTIAEFKSP--GSLDTSGEHDNTVVPGLQHKYAQTGLL 232
Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C YCR+CFR+ +VG + D YI ++ V+ +GGDP +LS
Sbjct: 233 LVTDRCASYCRYCFRKRIVGKDSDEIAP--DFARVAQYIAGHPEMTNVLLSGGDPFVLST 290
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAGKPVYIAIHANH 215
+L K+L L I H++ +RF +++ P+R L + + EAGK I H +H
Sbjct: 291 AKLGKILDHLLPIPHLESIRFGTKIVAFAPRRFEDPALPALFRRISEAGKTAVIVAHFDH 350
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
E S +A I L G+ L+QSVLL +NDDPEILA ++ ++PYYL
Sbjct: 351 IGEISVDAERNIRALRAQGVQFLNQSVLLAKVNDDPEILAATFAKCHQMGVRPYYLFQGR 410
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGS 334
G SHF++++ G +I + ++SG+ + YI + GK+++ + +G
Sbjct: 411 PVKGASHFQVSLRRGIEIARGINRRLSGIQKTFKYI--MSHYTGKIEV----LDLGADGR 464
Query: 335 YCITDHHNIVHD 346
+ H N + +
Sbjct: 465 VYMRYHQNKIPE 476
>gi|271498600|ref|YP_003331625.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
gi|270342155|gb|ACZ74920.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
Length = 386
Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 93/362 (25%), Positives = 159/362 (43%), Gaps = 21/362 (5%)
Query: 2 QLRHKTLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLIN----PHNPNDPI 56
Q ++ + L A E I + +TP ANLI + ++P+
Sbjct: 25 QQKN-AIRDEPALRAACGGWSDEIAQRITHNLASRKMQITPYYANLIKDAGYKNIVDNPL 83
Query: 57 ARQFIPQKEELNILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFR- 114
RQ +P + + E + +H H+Y +R++L++++ C YC+FCF
Sbjct: 84 WRQVVPFWLDDGATGYDGESENWELSHEMKTPICQHKYDNRVILRMVNTCNSYCQFCFEA 143
Query: 115 -REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
R + + K + +L YI+ + EVI +GGDP++L+ +L + L +R I+
Sbjct: 144 LRTLKVDSEKENAGRKAFQDSLNYIRNTPGVEEVILSGGDPMMLTDVKLDECLGAIRNIR 203
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
++R HSR +P RI L+ L+ +H HP E S+ A+ R+
Sbjct: 204 DSLLIRIHSRSLTFNPYRITDTLLDILRRHRVN-AFGVHVCHPLELSDAFRDAVKRIQQV 262
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEGQK 292
I+ S LL+G+ND+ + L L + +KPYYL+H + G S ++ +I +
Sbjct: 263 VPIVFSNMPLLRGVNDNEDTLRQLFIELYRMGVKPYYLYHFMPFSPGASEYKASIRDAIA 322
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHHNIV 344
I+ LK ++S + P Y+ LP GK V + G Y T+ V
Sbjct: 323 IMNRLKRRVSNIALPEYV--LPHAKGKFTVPLLSSVQDMPQFEDIDGERFYRFTNWQGDV 380
Query: 345 HD 346
Sbjct: 381 CR 382
>gi|147919038|ref|YP_687235.1| hypothetical protein RRC148 [uncultured methanogenic archaeon RC-I]
gi|110622631|emb|CAJ37909.1| conserved hypothetical protein [uncultured methanogenic archaeon
RC-I]
Length = 633
Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats.
Identities = 84/373 (22%), Positives = 151/373 (40%), Gaps = 38/373 (10%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINP---HNPNDPIA 57
Q++H LT + + + +++I +K H + +TP +L N + +
Sbjct: 237 QMKH-ILTDYKTISELVRLDQDEISALKFAQEHNIPVQITPYYLSLFNKAGRSALDRAVR 295
Query: 58 RQFIPQKEELNI-----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
Q +P D +G+ SP++GI RYP ++LK CP C +C
Sbjct: 296 AQVLPSMNYCKTIVKNRQSAADMDFMGEKWTSPVEGITRRYPQILILKPYDSCPQICVYC 355
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
R + S + + A+ +I++ I EV+ TGGDPL ++ + + +L+ + I
Sbjct: 356 QRNWEIKSIDEAEVKRDTIQNAIQWIKDNESISEVLITGGDPLTMNDQYIDSLLRKVSGI 415
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAIS 228
HV+ LR +R P+ P RI P+L + LK+ +P V + H HP E + E++ A+
Sbjct: 416 DHVERLRIGTRTPVTVPFRITPKLAEILKQYHQPGAREVCVVTHFEHPMEMTPESLQAVQ 475
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
+ AG+ + +Q V N +A + + + PYY + T FR+ I
Sbjct: 476 TIRQAGMSVYNQQVF-TYYNSRKFEIAKMRKVLKICGVDPYYTFNTKGKEETMDFRVPIA 534
Query: 289 EGQKIVASLKEKISG--------LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340
++ G P GK +++ + +
Sbjct: 535 RVEQERKEEARLQPGIVRTDEPVFNVPKL--------GK-----SHLRAWQDHEVIMILP 581
Query: 341 HNIV--HDYPPKS 351
YP +S
Sbjct: 582 GGQRSYRFYPWES 594
>gi|134046377|ref|YP_001097862.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C5]
gi|132664002|gb|ABO35648.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C5]
Length = 594
Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 16/315 (5%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINPHNP---NDPIARQFIPQ 63
+T + L + + + +I IK+ N +TP +L++ + + I Q IP
Sbjct: 201 ITDLETLQDLLDLSESEISSIKKACENSIPFGITPYYVSLMDETSSREFDHAIRAQVIPP 260
Query: 64 KEELNILPEER-----EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
++ E R D +G+N+ SP+ + RYP ++K C C +C R +
Sbjct: 261 TRYVDKTLESRTRGNSLDFMGENDTSPVDLVTRRYPMIAIMKPYETCAQICVYCQRNWQI 320
Query: 119 GS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
K + + A+ + + I EV+ TGGDP +L + L +L IKHV+
Sbjct: 321 KDVLSKDALAPKETVLNAIEWFKNHESIKEVLITGGDPALLDDEYLDWILSEFSQIKHVE 380
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLAN 232
+R +R+P+V PQRI ++ L + +P + ++ H H YE +++ A+S+L N
Sbjct: 381 RIRIGTRIPVVLPQRITKNFVEILAKYNEPGIREIAVSTHVEHVYEITKDVQEAVSKLKN 440
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G+ + +Q V N + L + + I PYYL + T +R+ I +
Sbjct: 441 KGMSVYNQQVF-TVENSRRFETSALRKVLKLIGIDPYYLFNTKGKDETIDYRVPIARALQ 499
Query: 293 IVASLKEKISGLCQP 307
+ + G C+
Sbjct: 500 ERSEEARLLPGYCRT 514
>gi|85118412|ref|XP_965436.1| hypothetical protein NCU02663 [Neurospora crassa OR74A]
gi|28927245|gb|EAA36200.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 492
Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats.
Identities = 91/372 (24%), Positives = 161/372 (43%), Gaps = 70/372 (18%)
Query: 1 MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
MQ++ + + D + +I +TP I + IN +P +DPIA
Sbjct: 153 MQMQSRDEFIKDVLD---------------GVAAATMAIRMTPYILSRINWLDPRHDPIA 197
Query: 58 RQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
RQF+P K L P+ D + + SP+KG+
Sbjct: 198 RQFLPMKSIMLPDHPKLTLDSLHETADSPVKGL--------------------------- 230
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+ + E A AYI+ + ++ +++ +GGD L ++L + + L + +++
Sbjct: 231 -----ASLKPTRRRWEEAFAYIESRPELQDIVVSGGDSYYLQPEQLTLIGERLISLPNIK 285
Query: 177 ILRFHSRVPIVDPQRINPE---LIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAA 226
RF S+ V P RI E + L K+AGK + + H N P E S + A
Sbjct: 286 RFRFASKGLAVAPTRILDESDGWVNALIDISNKAKKAGKSMALHTHFNSPNEISWISSDA 345
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+L G+++ +Q+VLL+G+NDD E ++ L+R + I PYY++ DL H R
Sbjct: 346 SQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQLADNNITPYYVYQCDLVERVEHLRTP 405
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG--------SYCIT 338
++ + A ++ I+G P +++DLPGG GK ++ + +
Sbjct: 406 LQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGK-RLACSYQSYDRDTGVSTFVAPAVTGR 464
Query: 339 DHHNIVHDYPPK 350
D + V++Y
Sbjct: 465 DKADKVYEYYDP 476
>gi|38567180|emb|CAE76473.1| related to L-lysine 2, 3-aminomutase [Neurospora crassa]
Length = 519
Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats.
Identities = 91/372 (24%), Positives = 161/372 (43%), Gaps = 70/372 (18%)
Query: 1 MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
MQ++ + + D + +I +TP I + IN +P +DPIA
Sbjct: 180 MQMQSRDEFIKDVLD---------------GVAAATMAIRMTPYILSRINWLDPRHDPIA 224
Query: 58 RQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
RQF+P K L P+ D + + SP+KG+
Sbjct: 225 RQFLPMKSIMLPDHPKLTLDSLHETADSPVKGL--------------------------- 257
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+ + E A AYI+ + ++ +++ +GGD L ++L + + L + +++
Sbjct: 258 -----ASLKPTRRRWEEAFAYIESRPELQDIVVSGGDSYYLQPEQLTLIGERLISLPNIK 312
Query: 177 ILRFHSRVPIVDPQRINPE---LIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAA 226
RF S+ V P RI E + L K+AGK + + H N P E S + A
Sbjct: 313 RFRFASKGLAVAPTRILDESDGWVNALIDISNKAKKAGKSMALHTHFNSPNEISWISSDA 372
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+L G+++ +Q+VLL+G+NDD E ++ L+R + I PYY++ DL H R
Sbjct: 373 SQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQLADNNITPYYVYQCDLVERVEHLRTP 432
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG--------SYCIT 338
++ + A ++ I+G P +++DLPGG GK ++ + +
Sbjct: 433 LQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGK-RLACSYQSYDRDTGVSTFVAPAVTGR 491
Query: 339 DHHNIVHDYPPK 350
D + V++Y
Sbjct: 492 DKADKVYEYYDP 503
>gi|94271846|ref|ZP_01292023.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93450322|gb|EAT01561.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 572
Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 76/323 (23%), Positives = 131/323 (40%), Gaps = 19/323 (5%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISN-HYSIALTPVIANLIN------PHNPND 54
Q++ + + L + +E+ + +TP +L++ +
Sbjct: 171 QIK-QIIRELDPLAKLVRLTEEEKQALALARENRLPFGITPYYLSLMDDELDGRAGGRDA 229
Query: 55 PIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
I Q +P L D +G+ + SP + I RYP +LK + CP C
Sbjct: 230 SIRAQVLPPLSYVQGVLATDNSASLDFMGEEDTSPFELITRRYPAICILKPFNTCPQICV 289
Query: 111 FCFRREMV--GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
+C R + KG EAA+ +I E I EV+ TGGDPL + ++RL ++++
Sbjct: 290 YCQRNWEIDEVMAKGAFAGWPRIEAAIQWIHEHPSIHEVLITGGDPLAMGNERLARIMER 349
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAI 224
+ I ++ +R +R + P R L+ L +P V + H HPYE + +
Sbjct: 350 VAAIPTIERIRIGTRTLVTMPMRFTEGLLSLLARHRQPGRREVAVVTHVQHPYEITPDLA 409
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A++RL GI + +Q V A L R + I PYY + T+ +R
Sbjct: 410 EAVNRLRLRGIPVYNQLVY-TFYASRRFEAAALRRQLRLIGIDPYYTFNTKGKDETAAYR 468
Query: 285 LTIEEGQKIVASLKEKISGLCQP 307
+ I + + GL +
Sbjct: 469 VPIARLIQEQQEEARLLPGLGRT 491
>gi|94264369|ref|ZP_01288160.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93455198|gb|EAT05414.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 598
Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 77/323 (23%), Positives = 131/323 (40%), Gaps = 19/323 (5%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISN-HYSIALTPVIANLIN------PHNPND 54
Q++ + + L + +E+ + +TP +L++ +
Sbjct: 197 QIK-QIIRELDPLDRLVRLTEEEKQALALARENRLPFGITPYYLSLMDDELDGRAGGRDA 255
Query: 55 PIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
I Q +P L D +G+ + SP + I RYP +LK + CP C
Sbjct: 256 SIRAQVLPPLSYVQGVLATDNSASLDFMGEEDTSPFELITRRYPAICILKPFNTCPQICV 315
Query: 111 FCFRREMV--GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
+C R + KG EAA+ +I E I EV+ TGGDPL + ++RL ++++
Sbjct: 316 YCQRNWEIDEVMAKGAFAGWPRIEAAIQWIHEHPSIHEVLITGGDPLAMGNERLARIMER 375
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAI 224
+ I ++ +R +R + P R L+ L +P V + H HPYE + E
Sbjct: 376 VAAIPTIERIRIGTRTLVTMPMRFTEGLLSLLARHRQPGRREVAVVTHVQHPYEITPELA 435
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A++RL GI + +Q V A L R + I PYY + T+ +R
Sbjct: 436 EAVNRLRLRGIPVYNQLVY-TFYASRRFEAAALRRQLRLIGIDPYYTFNTKGKDETAAYR 494
Query: 285 LTIEEGQKIVASLKEKISGLCQP 307
+ I + + GL +
Sbjct: 495 VPIARLIQEQQEEARLLPGLGRT 517
>gi|108758698|ref|YP_632865.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
gi|108462578|gb|ABF87763.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
Length = 456
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 80/367 (21%), Positives = 162/367 (44%), Gaps = 31/367 (8%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEIKEISN---HYSIALTPVIANLINPHN-PNDPIA 57
R T+ + ++L + + + ++ S+ + P + N +N + DP+
Sbjct: 53 RKHTIKNLKELKATLGALLPDDLAESMERDQRERATMSLLVPPQMLNTMNLEDLWRDPVR 112
Query: 58 RQFIPQKE----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
R +P E P+ D + + + ++G+ HRYP ++L ++L CP YC C
Sbjct: 113 RYMLPAYADRLTEWTNHPKASRDSLHEQDMWVVEGLTHRYPTKVLAEMLPTCPQYCGHCT 172
Query: 114 RREMVGSQKGTVL-------SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
R ++VG+ V L Y++ + +V+ +GGD L ++L+ +
Sbjct: 173 RMDLVGNDVPQVSKHKFGIGPKDRYAQMLDYLRRTPTVRDVVVSGGDIANLPIQQLEPFV 232
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKPVYIAIHANHPYE 218
+L I +++ +R S+ + PQ L + E G + + H NH +
Sbjct: 233 SSLMDIPNIRDIRLASKGLMAIPQHFLQDSVLQGLDRLAKKAVERGVDLALHTHVNHAQQ 292
Query: 219 FSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPDL 276
+ A+ +L G + +Q VLL+G+ND P+ L +L T ++ +I PYY + D+
Sbjct: 293 LTPLVGKAVRKLLEMGFRDVRNQGVLLRGVNDSPQALLDLCFTLLDHAKILPYYFYMCDM 352
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--THNIKKVGNGS 334
+ H+RL++ + Q++ + + G P + D+P GK + ++ G
Sbjct: 353 IPNSEHWRLSVAQAQQLQHDIMGYMPGFATPRIVCDVPF-VGKRWVHQVAEYDRERGISY 411
Query: 335 YCITDHH 341
+ ++
Sbjct: 412 WT-KNYR 417
>gi|300722010|ref|YP_003711290.1| hypothetical protein XNC1_1003 [Xenorhabdus nematophila ATCC 19061]
gi|297628507|emb|CBJ89074.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
Length = 389
Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 94/366 (25%), Positives = 164/366 (44%), Gaps = 22/366 (6%)
Query: 2 QLRHKTLTSAQDLY-NANLIKKEQIDEIKEISNHYSIALTPVIANLI-NPHNPND----P 55
Q ++ L + L E I++ + +TP + I D P
Sbjct: 27 QQKN-ALRDEESLRIACGGWNDEITRRIQQNLQGQKMQITPYYLSRILTTSQSGDITTNP 85
Query: 56 IARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
+ RQ +P E + + E + H+Y +R++L++++ C YC+FCF
Sbjct: 86 LWRQVVPFWNEEKLNGYDGESENWELKEEMKTPICQHKYDNRVILRMVNACNSYCQFCFE 145
Query: 115 --REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
R + + + + +L YI+ + EVI +GGDPL+L+ +L + L +R I
Sbjct: 146 ALRTLKVNSDKSNAGRTSFQQSLEYIKNTPSVEEVILSGGDPLMLTDSKLDESLAAIREI 205
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
+ ++R HSR +P RI L++ LK+ +H HP+E SEE A+ + +
Sbjct: 206 REDLLIRVHSRALTFNPYRITDALLEILKKHRVN-SFGVHICHPHELSEEFQHAVRCIQS 264
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEGQ 291
I+ S L+GIND+ EIL L + + +KPYYL+H + G+S ++ +I +
Sbjct: 265 VVPIVFSNMPFLRGINDNEEILHKLFISLYRIGVKPYYLYHFMPFSPGSSEYKASINDAI 324
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHHNI 343
I+ LK ++S + P Y+ LP GK V + + G Y + N
Sbjct: 325 AIMGKLKRRVSNIALPEYV--LPHMKGKFTVPLFTNPGEMPYFETINGRRYYRFINWRNE 382
Query: 344 VHDYPP 349
++
Sbjct: 383 QCEWLD 388
>gi|149924160|ref|ZP_01912537.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1]
gi|149814961|gb|EDM74521.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1]
Length = 407
Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats.
Identities = 79/341 (23%), Positives = 138/341 (40%), Gaps = 49/341 (14%)
Query: 32 SNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEER--------------- 74
S I LI+ P+DP+ + Q L R
Sbjct: 2 STVLPFKTNEYIVEELIDWDRVPDDPMFQLTFVQSGMLAEHDYARMAELVRAGASKAEIR 61
Query: 75 -----------EDPIGDNNHSPL-------KGIVHRYPDRILLKLLH--VCPVYCRFCFR 114
P G +H+ +G+ H+Y + +L C YC FCFR
Sbjct: 62 SAADAIRLRLNPHPAGQRSHNVPTVDGRRLEGVQHKYRETVLFFPQQGQTCHAYCTFCFR 121
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR--YI 172
+G S++ Y++ + +V+FTGGDP+++ + L++ ++ L
Sbjct: 122 WAQFVGLEGMKFESREMADLTTYLRNNPAVTDVLFTGGDPMVMKTRVLRRYIEPLLHPDF 181
Query: 173 KHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEA 223
+H+ +R ++ PQR + L + + +G+ + + H NHP E +E A
Sbjct: 182 EHIN-VRIGTKSVSYWPQRYVSDDDADELLALFEEVSASGRHLALMAHYNHPRELQTEVA 240
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A++R+ + G + QS L++ IND PE A L RT V+L PYY+ ++F
Sbjct: 241 QRAVARIRSTGAQIRIQSPLIRRINDAPETWAELWRTGVKLGCIPYYMFVERDTGPRNYF 300
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
+ + +I ++SGL + + GKV +D
Sbjct: 301 EVPLARAWEIFGDAYRQVSGLARTVRGPSMSTMPGKVLVDG 341
>gi|218781690|ref|YP_002433008.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
gi|218763074|gb|ACL05540.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
Length = 594
Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 83/328 (25%), Positives = 143/328 (43%), Gaps = 17/328 (5%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINP--HNPND-PIARQFIPQ 63
+ + L + + E+ I +TP A+L++ D + Q IP
Sbjct: 200 IRDEKILGDLVQLTDEEKQAIALARERRIPFGITPYYASLMDEKEDRKRDYAVRAQVIPP 259
Query: 64 KE------ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
E E D + +N+ SP++GI RYP ++LK + CP C +C R
Sbjct: 260 LNYIEKLWEARQRSEASMDFMLENDTSPIEGITRRYPMIVILKPILTCPQICVYCQRNWE 319
Query: 118 VGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
+ + LS K E A+ +I + +I EV+ TGGDP +LS+ R++ +L L IKH+
Sbjct: 320 IEDVYSQTAALSQKKLERAIQWIADTPEIREVLVTGGDPFLLSNSRIENLLFRLSSIKHI 379
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLA 231
+ +R +R P+ PQRI L + + +P + + H HPYE + A+ A+ ++
Sbjct: 380 ERIRIGTRTPVTLPQRITESLARDIGHFHEPGKREITVITHFEHPYEITPNAMEAVQKIR 439
Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
G+ + +Q V N A L + + PYY + T +R+ +
Sbjct: 440 RLGMSVKNQMVF-TTFNSRKFEAAVLRHKLSLIGVSPYYTFNTKGKEETEDYRVPLARLL 498
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGK 319
+ A + G + ++ G GK
Sbjct: 499 QERAEEARLMPGTVRTDGVVFNVPGLGK 526
>gi|219117417|ref|XP_002179503.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409394|gb|EEC49326.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 470
Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 79/390 (20%), Positives = 153/390 (39%), Gaps = 51/390 (13%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN---DPIA 57
+ + +L+ + + + K + +I+ + +P + LI+ + DP
Sbjct: 33 RYKAISLSHLEKVAEKHPQLKPHLRDIQLSGLVFPFKASPYYVDELIDWECEDVREDPFY 92
Query: 58 RQFIPQKEELNILPEE-------------------------REDPIGDNNHSPLK----- 87
+ P + L E P G + K
Sbjct: 93 KLVFPTMDMLIEEHREKLEKAHKAGDPVKLIKTVAEIREDLNPHPAGQKELNAPKEDKLT 152
Query: 88 GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L+ C YC +CFR + K+ + Y+ E ++
Sbjct: 153 GVQHKYSETVLVFPAAAQTCHAYCTYCFRWAQFIGDDELRFAQKEATSLFEYLAEHEEVS 212
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP-------- 194
+++ TGGDP+I+ K L + L+ L + H++ LR +R PQR
Sbjct: 213 DILMTGGDPMIMKTKSLAQYLEPLTDPNFLPHIKNLRIGTRSLSFWPQRFTTDDDADECI 272
Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEF-SEEAIAAISRLAN-AGIILLSQSVLLKGINDDP 251
EL + ++E G + + I H H E +++ A++R+ A + SQS +++G+NDD
Sbjct: 273 ELFRRVREQGNRHIAIMAHLGHDRELSTDKFQDAVNRIQKEAYATIRSQSPIMRGVNDDA 332
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
E+ A R V++ I PYY+ +F + + K+ + SGL +
Sbjct: 333 EVWARKWRKEVQMGIIPYYMFMARDTGAQQYFDVPLVRAHKLYSDAIRNCSGLIRTARGP 392
Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ GKV++ +G ++ +
Sbjct: 393 SMSCTPGKVEVTGVEEI-MGQKAFVLRFLQ 421
>gi|297570169|ref|YP_003691513.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296926084|gb|ADH86894.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 594
Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 73/319 (22%), Positives = 127/319 (39%), Gaps = 15/319 (4%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISN-HYSIALTPVIANLIN--PHNPNDPIAR 58
Q+RH + + L + + + + +TP +L++ + I
Sbjct: 197 QIRH-IVRELETLEKLVKLSDSEREAVALARKHKLPFGITPYYLSLMDDELGGRDASIRA 255
Query: 59 QFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
Q +P L + D +G+ + SP I RYP +LK + CP C +C R
Sbjct: 256 QVLPPMNYVQGVLAVKDPSCLDFMGEEDTSPFDLITRRYPAICILKPYNTCPQICVYCQR 315
Query: 115 REMV--GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ G + + A+ +I + I EV+ TGGDPL + ++ L ++++ + I
Sbjct: 316 NWEIDEVMAPGAFAGMEKIKEAIDWIHDHPAIHEVLITGGDPLAMGNETLAEIIERVAAI 375
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAIS 228
V+ +R +R + P R L + +P V + H HPYE + E + A++
Sbjct: 376 PTVERIRLGTRTLVTMPMRFTEGLAGLIARHHRPGRREVAVMTHVQHPYEITPEMVEAVN 435
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
RL GI + +Q V A L R I PYY + T +R+ I
Sbjct: 436 RLRQLGIPVYNQLVY-TFFISRRFEAACLRRQLRLSGIDPYYTFNTKGKDETIGYRVPIA 494
Query: 289 EGQKIVASLKEKISGLCQP 307
+ + GL +
Sbjct: 495 RLIQEQEEEARLLPGLGRT 513
>gi|134045650|ref|YP_001097136.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
gi|150403695|ref|YP_001330989.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
gi|132663275|gb|ABO34921.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
gi|150034725|gb|ABR66838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
Length = 594
Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 81/321 (25%), Positives = 141/321 (43%), Gaps = 17/321 (5%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPH---NPNDPIA 57
QL + + S + L N + + + I++ + +TP +L++ + +
Sbjct: 196 QLENVVINS-KTLENLVALSVSEKNAIEKARQNNIPFGITPYYVSLMDNTTDRKYDHAVR 254
Query: 58 RQFIPQKEELNILPE-----EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
Q IP + E E D +G+ + SP+ + RYP ++K C C +C
Sbjct: 255 AQVIPPLNYVEKTAEARNSGESLDFMGETDTSPVDLVTRRYPMIAIMKPYETCAQICVYC 314
Query: 113 FRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
R + K + + E A+ + + I EV+ TGGDP ILS + L +L
Sbjct: 315 QRNWQIKDVFSKNALAKKESVENAIEWFRNNESIKEVLLTGGDPGILSEEYLAYLLSEFS 374
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAA 226
IKH++ +R +R P+V PQRI E + L +P V ++ H H YE +++ A
Sbjct: 375 EIKHLERIRIGTRTPVVLPQRITDEFTEVLGHYNEPGIREVAVSTHIEHVYEVTKDLKDA 434
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+S+L N GI + +Q V N + L + + I+PYYL + T ++R+
Sbjct: 435 VSKLKNNGIYVYNQQVF-TVENSRRFETSALRKALKLVGIEPYYLFNTKGKEETVNYRVP 493
Query: 287 IEEGQKIVASLKEKISGLCQP 307
I + + G C+
Sbjct: 494 IARALQERKEEARLLPGYCRT 514
>gi|156938169|ref|YP_001435965.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis
KIN4/I]
gi|156567153|gb|ABU82558.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis
KIN4/I]
Length = 621
Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 78/362 (21%), Positives = 147/362 (40%), Gaps = 40/362 (11%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISN-HYSIALTPVIANLINPHN--PND-PIARQFI 61
+ + ++L + +E +++ + +TP +L + +D + RQ +
Sbjct: 225 RAIKVLKELVK--GLSEEDWKALEDAVKYNVPFGITPYYLHLFDFDEGWKHDYAVRRQVL 282
Query: 62 PQ---KEELNILPEERE---DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
P +E+ +ERE D +G+++ SP I RYP +LK H CP C +C R
Sbjct: 283 PPLHYVKEMVAHLDEREYYFDFMGEHDTSPHPLITRRYPMVAILKAAHTCPQICVYCQRN 342
Query: 116 EMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
+ + K + + + A+ + E I +V+ TGGDP IL + ++ ++K L +
Sbjct: 343 WEIMTAMDKEAIPTRMTIDEAIDWFAEHPNIIDVLVTGGDPFILRDEDIEHIVKRLSELD 402
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISR 229
HV+++RF +R P+ P RI PE + L +P +++ H H YE + E A++
Sbjct: 403 HVKMIRFGTRTPVTVPMRITPEFAEMLGSYIEPGKRNIHVVTHVEHAYEVTPEMAEAVTN 462
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L I + +Q V N + L + I PYY +P T + + +
Sbjct: 463 LRKNKIYVYNQQVF-TFWNSRRFETSALRIALKSIGIDPYYTFYPKGKWETKDYLVPVAR 521
Query: 290 GQKIVASLKEKISG--------LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ + G P GK ++++ + +
Sbjct: 522 ILQERKEEARVLPGTFRTEEPVFNVPRL--------GK-----NHLRAWQDHELIMIRPD 568
Query: 342 NI 343
Sbjct: 569 GR 570
>gi|270264931|ref|ZP_06193195.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13]
gi|270041229|gb|EFA14329.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13]
Length = 333
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 98/336 (29%), Positives = 160/336 (47%), Gaps = 21/336 (6%)
Query: 20 IKKEQIDEIKEISNHYSI--ALTPVIANLINPHNPNDPIARQFIPQKEELNIL-----PE 72
+ EQ +K++ LTP + L Q I E N
Sbjct: 1 MSAEQKIVVKQVEEETRFSEKLTPYLKELSKTS--------QAIKDMYEFNPEYETLPAN 52
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKD 130
D + + +P+ G V +Y ++L+ L + C CR+C R R VG L
Sbjct: 53 LDVDLLNEKTSTPVFGTVKKYDGQLLVLLSYTCAANCRYCERQDRVGVGLDVEGRLKMSQ 112
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ + YI I+EVI +GGDPL + K LQ + L+ I HV+++R H+R P+ +P
Sbjct: 113 IDDIVDYIANDKSIYEVIASGGDPLT-NPKGLQYLFNRLKAIDHVKVVRIHTRYPLQNPG 171
Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ EL++ L +A VY+++H +HP E E I I G +LL+Q+V LK INDD
Sbjct: 172 KVRMELMEELAQAKPTVYLSLHIDHPDELQPEVIEMIRAFKKMGYVLLTQTVFLKTINDD 231
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
+ L L EL ++PYY++H T F + +E+ I+ L+ ++SGL P ++
Sbjct: 232 KDTLKTLFLRLFELGVRPYYIYHGQEVTSTRRFVMRLEDEMAIMTQLRNELSGLAFPQHV 291
Query: 311 LDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+D+P GKV + + + + +TD +
Sbjct: 292 IDIPSASGKVVVPSDH---WQTDTATVTDFYGKTVR 324
>gi|260828943|ref|XP_002609422.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae]
gi|229294778|gb|EEN65432.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae]
Length = 512
Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 76/367 (20%), Positives = 135/367 (36%), Gaps = 51/367 (13%)
Query: 30 EISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEELNILPEER------------- 74
+ + + LI+ N P DPI + PQ L ER
Sbjct: 80 AAATVLPMRTNNYVVQELIDWSNVPEDPIFQLTFPQPGMLKPEALERISKLMKNNAPRTV 139
Query: 75 -------------EDPIGDNNHS-------PLKGIVHRYPDRILLKLL--HVCPVYCRFC 112
P + PL G+ H+Y + +L C YC +C
Sbjct: 140 LQREAEVIRKEMNPHPAQQKTMNVPRVDGHPLPGLQHKYRETVLFFPAEGQFCHAYCTYC 199
Query: 113 FRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
FR S D L Y++ + +++ TGGDP+++S +RL + L
Sbjct: 200 FRWAQFTSVGSPQQFQSDDSKLLQLYLRRNRHVSDLLLTGGDPMVMSAQRLGGYILPLLK 259
Query: 172 ---IKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EAGKPVYIAIHANHPYEF- 219
+ ++ +R ++ P R + +L++ + ++G+ + I H +HP E
Sbjct: 260 DTCLDNLSTIRIGTKSLAYWPYRYVTDSDSDDLLRIFEEVVKSGRQLAIMAHFSHPRELS 319
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ AI RL G ++ +Q+ L+ +N DP A L+RT L + PYY+
Sbjct: 320 TPTVQEAIRRLRMTGAVIRAQAPLVNHVNADPATWARLIRTETRLGVIPYYMFVERDTGA 379
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
+F + + +I + +SGL + + GKV + G + +
Sbjct: 380 RHYFEVPLARAVEIYSQAFSSVSGLGRTLRGPSMSATPGKVHVVGVTEIA-GEKVFVLKM 438
Query: 340 HHNIVHD 346
D
Sbjct: 439 LQGRNPD 445
>gi|302867587|ref|YP_003836224.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029]
gi|315506013|ref|YP_004084900.1| lysine 2,3-aminomutase [Micromonospora sp. L5]
gi|302570446|gb|ADL46648.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029]
gi|315412632|gb|ADU10749.1| Lysine 2,3-aminomutase [Micromonospora sp. L5]
Length = 468
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 78/373 (20%), Positives = 152/373 (40%), Gaps = 37/373 (9%)
Query: 4 RHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP------ 52
R + + + L ++ ++ ++ S+ + P + N + PH P
Sbjct: 60 RVNCVKNIKQLRAVLGDTVDETFYADLEADQKALATMSMLVPPQMLNTMVPHQPMSTEAL 119
Query: 53 -NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
DPI R IP + P D + +++ +G+ HRYP ++L +LL CP
Sbjct: 120 LADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLSTCPQ 179
Query: 108 YCRFCFRREMVGSQKG-------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
YC C R ++VG+ T+ +A + Y++ + +V+ +GGD + +
Sbjct: 180 YCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANVPWR 239
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGKPVYIAIH 212
L+ L L I+ ++ +R ++ + PQ + + G + I H
Sbjct: 240 NLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAIHTH 299
Query: 213 ANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYY 270
NH + A + G+ + +Q VL++G+N L +L E I PYY
Sbjct: 300 VNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVNATSADLLDLCFALQGEAGILPYY 359
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK--VKIDTHNIK 328
+ D+ H+R+ + Q++ + + G P + D+P GK V + T +
Sbjct: 360 FYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVPF-VGKRWVHMLTDYDR 418
Query: 329 KVGNGSYCITDHH 341
+ G + ++
Sbjct: 419 ERGISYWT-KNYR 430
>gi|115380256|ref|ZP_01467274.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|310822788|ref|YP_003955146.1| hypothetical protein STAUR_5549 [Stigmatella aurantiaca DW4/3-1]
gi|115362735|gb|EAU61952.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|309395860|gb|ADO73319.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 456
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 83/367 (22%), Positives = 161/367 (43%), Gaps = 31/367 (8%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEIKEISN---HYSIALTPVIANLINPHN-PNDPIA 57
R T+ + ++L A + +E I+ S+ L P + N +N + DP+
Sbjct: 53 RKHTVKNLRELRAALGPLLPEELAVSIERDQKERATMSVLLPPQMLNTMNLEDLWGDPVR 112
Query: 58 RQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
R +P + P D + + ++G+ HRYP ++L ++L CP YC C
Sbjct: 113 RYMLPAFADRLTTWPNHPRASRDSLHEAEMWVVEGLTHRYPTKVLAEMLPTCPQYCGHCT 172
Query: 114 RREMVGSQKGTVL-------SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
R ++VG+ V + E L Y++ + +V+ +GGD L ++L+ +
Sbjct: 173 RMDLVGNDVPQVEKHRFSIGPKERYEKMLDYLRRTPSVRDVVVSGGDIANLPIQQLEPFV 232
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKPVYIAIHANHPYE 218
+L I +++ +R S+ + PQ L + E G + + H NH +
Sbjct: 233 SSLMDIPNIRDIRLASKGLMGIPQHFLQDSVLQGLDRLAKKAVERGVDLALHTHVNHARQ 292
Query: 219 FSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPDL 276
+ A+ +L + G + +Q VLL+G+ND L +L T ++ +I PYY + D+
Sbjct: 293 LTPLVGKAVRKLLDMGFRDVRNQGVLLRGVNDSAPALLDLCFTLLDHAKILPYYFYMCDM 352
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--THNIKKVGNGS 334
+ H+RL++ + Q + + + G P + D+P GK + ++ G
Sbjct: 353 IPNSEHWRLSVAQAQTLQHDIMGYMPGFATPRIVCDVPF-VGKRWVHQVAEYDRERGISY 411
Query: 335 YCITDHH 341
+ ++
Sbjct: 412 WT-KNYR 417
>gi|150399938|ref|YP_001323705.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
gi|150012641|gb|ABR55093.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
Length = 594
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 16/315 (5%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPND-PIARQFIPQ 63
+T ++ L N + + + I++ + +TP +L++ ND + Q IP
Sbjct: 201 VTDSKTLENLVRVSELEKYSIEKARENNIPFGITPYYVSLMDNSLDRRNDHAVRAQVIPP 260
Query: 64 KEELNI-----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+ + D +G+++ SP+ + RYP ++K C C +C R +
Sbjct: 261 VRYVEKTIEARSSGKNLDFMGESDTSPVDLVTRRYPMIAIMKPYETCAQICVYCQRNWQI 320
Query: 119 GS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+ S + A+ + E I E++ TGGDP ILS++ L +L IKH++
Sbjct: 321 KDVFSDNVLASKESVNNAINWFNENECIKELLLTGGDPAILSNEYLDYLLSEFSKIKHLE 380
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLAN 232
+R +R P+ PQRI E + L + KP + I+ H H YE + + AISRL N
Sbjct: 381 RIRIGTRTPVALPQRITNEFSEILGKYNKPGVREIAISTHVEHVYEVTADLRDAISRLKN 440
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
+GI + +Q V N + L + + I+PYYL + T+++R+ I +
Sbjct: 441 SGITVYNQQVF-TIENSRRFETSALRKVLKLIGIEPYYLFNTKGKEETTNYRVPIARALQ 499
Query: 293 IVASLKEKISGLCQP 307
+ G C+
Sbjct: 500 ERKEEARLLPGYCRT 514
>gi|71735715|ref|YP_276669.1| arginine aminomutase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556268|gb|AAZ35479.1| arginine aminomutase, putative [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 385
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 89/329 (27%), Positives = 149/329 (45%), Gaps = 22/329 (6%)
Query: 37 IALTPVIANLINPH---NP--NDPIARQFIPQKEELNILPEEREDPIGDNNH-SPLKGIV 90
+ +TP +LI P P+ RQ +P E + + + NH
Sbjct: 56 MQITPYYVDLIMQSLGSEPVTEHPLWRQVVPYWNENVMGDYDGASENWELNHEMKTPICQ 115
Query: 91 HRYPDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
H+Y +R++L++ + C YC+FCF R + ++ ++ YI+ I EVI
Sbjct: 116 HKYDNRVILRMTNTCNAYCQFCFEALRTLQVGTDKKNANTDLFLDSVEYIRNNPAIEEVI 175
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+GGDPL+LS ++L++ L LR I+ ++R HSR +P R+ E + L +
Sbjct: 176 LSGGDPLMLSDRKLEENLAALRSIREDLLIRIHSRALSFNPFRVTDEFVAILAKYKVN-A 234
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+H HP E S + AIS++ A I+ S LL+G+ND+ + L L + +KP
Sbjct: 235 FGVHVCHPLELSVDFERAISKIRIAVPIIFSNMPLLRGVNDNEKTLHRLFIDLYRMGVKP 294
Query: 269 YYLHHPDL-AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK--VKI--- 322
YYL+H + G S ++ +I + I+ LK ++S + P Y+ LP GK V +
Sbjct: 295 YYLYHFMPFSPGASEYKASISQAIAIMNRLKRRVSNIALPEYV--LPHAQGKFTVPLVDF 352
Query: 323 -----DTHNIKKVGNGSYCITDHHNIVHD 346
+ G Y +
Sbjct: 353 EQPEDLPRFENRDGQRYYKFKNCEGQWCT 381
>gi|218508047|ref|ZP_03505925.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Brasil 5]
Length = 198
Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats.
Identities = 117/198 (59%), Positives = 157/198 (79%)
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+LS +RL+++++ L I HV+I+RFH+RVP+VDP++I+ LI LK +GK VY+A+HA
Sbjct: 1 PLVLSPRRLREIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHA 60
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHH
Sbjct: 61 NHPRELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHH 120
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
PDLA GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK I I+ G+G
Sbjct: 121 PDLAPGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVISESVIRATGDG 180
Query: 334 SYCITDHHNIVHDYPPKS 351
Y ++D+ H YPP
Sbjct: 181 CYSVSDYRGGEHSYPPAG 198
>gi|32967991|gb|AAP92506.1| lysine 2,3-aminomutase [Streptomyces vinaceus]
Length = 445
Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats.
Identities = 82/377 (21%), Positives = 154/377 (40%), Gaps = 41/377 (10%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEI---KEISNHYSIALTPVIANLINPHNPND---- 54
R + +A+ L + + D++ +E ++ +TP + N I P P D
Sbjct: 26 RAHCVKNARQLRAVVGDGLDDKFYDDLTEDQEHMATMAMLITPQMLNTIAPETPADSDGY 85
Query: 55 -------PIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103
P+ R +P + + P D + + ++G+ RYP ++L +L+
Sbjct: 86 HDAFYADPVRRYMVPVRSDRDLRWPSHPLSSRDSLHEAEMWVVEGLTRRYPTKVLAELVA 145
Query: 104 VCPVYCRFCFRREMVGSQKG-------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
CP YC C R ++VG T+ + EA L +++ + +V+ +GGD
Sbjct: 146 TCPQYCGHCTRMDLVGGSTPSVDKQRLTLRPADRQEAILDHLRRTPGVRDVVVSGGDVAN 205
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGKPVY 208
+ RL+ L L I V+ +R S+ + PQ + G +
Sbjct: 206 VPWPRLESFLLRLLEIDSVRDIRLASKALVGLPQHWLQPQVVSGLENVAGVAARRGVHLA 265
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVE-LRI 266
+ HANH + L +AG+ + +Q VL++G+ND L +L + I
Sbjct: 266 VHTHANHVQSVTPLVAEGARALLDAGVRDVRNQGVLMRGVNDSTAALLDLCFALQDEAGI 325
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-- 324
PYY + D+ G H+R ++ E Q + ++ + G P + D+P GK +
Sbjct: 326 LPYYFYMCDMVPGAEHWRTSLAEAQDLQHAIMGYLPGYATPRIVCDVP-YVGKRWVHQAV 384
Query: 325 HNIKKVGNGSYCITDHH 341
++ G + ++
Sbjct: 385 EYDRERGISYWT-KNYR 400
>gi|256810214|ref|YP_003127583.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
fervens AG86]
gi|256793414|gb|ACV24083.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
fervens AG86]
Length = 620
Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats.
Identities = 78/368 (21%), Positives = 146/368 (39%), Gaps = 42/368 (11%)
Query: 2 QLRH-----KTLTSAQDLYNA--NLIKKEQIDEIKE-ISNHYSIALTPVIANLINPHNP- 52
Q ++ K + + ++L I E ++ I++ + N +TP +L + NP
Sbjct: 218 QFKNVIKGLKGIETLKELREETNFKISDEDLEIIEKAVKNGIPFGITPYYLHLFDFENPY 277
Query: 53 --NDPIARQFIPQ------KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
+ + RQ IP E ++ D +G+++ SP+ + RY ++K
Sbjct: 278 VEDLAVRRQVIPPEWYVEKMMEHKEDRDKAFDFMGEHDTSPIDLVTRRYVPIAIIKPYES 337
Query: 105 CPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
CP C +C R MV + E AL + E + E++ TGGDP LS K ++
Sbjct: 338 CPQICVYCQRNWMVQDFDTKAFKGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAIE 397
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
++L + + HV +RF +R + P RI EL + L K + ++ H YE + E
Sbjct: 398 RILNRVSEMDHVIGVRFGTRTIVTAPMRITDELAELLGSFEKSLMVSTHVESCYEITPEV 457
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
+ +L I + +Q V + ++ E L ++ I PYY +P +
Sbjct: 458 KETVEKLRKNNIYVYNQHVFHRYVSRRFE-NVALRIALKKVGIIPYYTFYPKGKMEHKDY 516
Query: 284 RLTIEE-GQKIVASLKEKISG--------LCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
+ I Q++ + + G P GK ++++ +
Sbjct: 517 LVPIARLAQEVKEEAR-LLPGSFRTDEPIFNVPRM--------GK-----NHLRAWQDRE 562
Query: 335 YCITDHHN 342
+
Sbjct: 563 LIAIKPNG 570
>gi|153875079|ref|ZP_02003031.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
gi|152068457|gb|EDN66969.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
Length = 314
Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 14/268 (5%)
Query: 89 IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+ H+Y + +L C YC FCFR L+S++ +A + Y+ E ++ +
Sbjct: 1 MQHKYRETVLFFPSQGQTCHAYCSFCFRWPQFVGISDLKLASREVDALIQYVSEHPEVSD 60
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196
++ TGGDP+I+ + L + L + H++ +R ++ P R + L
Sbjct: 61 ILLTGGDPMIMKTRILATYIDALLEANLPHLKTIRIGTKALSYWPYRFTSDADAEDLLTL 120
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ K + H NHP E ++ AI + G + +QS LL IND PEI A
Sbjct: 121 FAKVATKNKHLAFMAHFNHPRELKTDAVREAIKGIRETGAQIRTQSPLLAHINDQPEIWA 180
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ +T EL PYY+ +F +++ I + + ++GL + +
Sbjct: 181 EMWKTQTELGCIPYYMFITRDTGAQHYFGVSLIRAWDIFKNAYQNVTGLARTVRGPSMSA 240
Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GKV++ N + +
Sbjct: 241 TPGKVQMLGVNQI-KDEKVFVMQFLQAR 267
>gi|269126573|ref|YP_003299943.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183]
gi|268311531|gb|ACY97905.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183]
Length = 456
Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats.
Identities = 81/370 (21%), Positives = 151/370 (40%), Gaps = 34/370 (9%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEIKE---ISNHYSIALTPVIANLINPHN----PND 54
R + + + L I + ++ + +TP + N ++ D
Sbjct: 48 RAHCVKNIRQLQQVLGDLIDESFYADLHRDQTGHATMPMLVTPQMLNTMDTSTTEAFYAD 107
Query: 55 PIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
P+ R +P + P D + + + ++G+ HRYP ++L +LL CP YC
Sbjct: 108 PVRRYMLPVASDRRTDWPSHPCATRDSLHEADMWAVEGLTHRYPTKVLAELLSTCPQYCG 167
Query: 111 FCFRREMVGSQKGTVL-------SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C R ++VG+ V + EA L Y++ + +V+ +GGD L RL+
Sbjct: 168 HCTRMDLVGTSTPAVAKHRFTARPADRHEAMLEYLRRTPTVRDVVVSGGDVANLPWPRLE 227
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKPVYIAIHANH 215
+ L I ++ +R ++ + PQ L + G + + H N
Sbjct: 228 AFVDRLLDIDSIRDIRLATKALMALPQHWLQDEVRAGMERLAAKARRRGVALAVHTHVNT 287
Query: 216 PYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHH 273
+ A L AG+ + +Q VLL G+ND P L +L ++ +I PYYL+
Sbjct: 288 ARSLTPLVARAARGLLEAGVRDVRNQGVLLHGVNDSPAALLDLSFALLDEAQIMPYYLYM 347
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--THNIKKVG 331
D+ G+ H+RL + Q++ ++ + G P + D+P GK + + G
Sbjct: 348 CDMIPGSEHWRLPLWRAQELQHAIMGYLPGFATPRIVCDVP-YVGKRWVHQPADYDRLRG 406
Query: 332 NGSYCITDHH 341
+ ++
Sbjct: 407 ISYWT-KNYR 415
>gi|150249481|gb|ABR67759.1| CmnP [Saccharothrix mutabilis subsp. capreolus]
Length = 448
Score = 228 bits (582), Expect = 9e-58, Method: Composition-based stats.
Identities = 79/374 (21%), Positives = 152/374 (40%), Gaps = 38/374 (10%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYS---IALTPVIANLINPHNPND---- 54
R + + + L + + D++ ++ + L P + N + P D
Sbjct: 39 RVHCVRNTRQLRAVVGDLLDERFYDDLAADQESFATMSMLLPPQMLNTMVPEGAADFTGA 98
Query: 55 ----PIARQFIPQKE----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
P+ R +P + E P D + + ++G+ HRYP ++L +L+ CP
Sbjct: 99 FYADPVRRYMLPVRSDRDPEWPSHPYSSRDSLHEAEMWVVEGLTHRYPTKVLAELVSTCP 158
Query: 107 VYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
YC C R ++VG+ V K + L Y++ + +V+ +GGD +
Sbjct: 159 QYCGHCTRMDLVGNSTPQVRKHKLELKPVDRQDRMLDYLRRTPAVRDVVVSGGDVANVPW 218
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKPVYIAI 211
+L+ L L I+ V+ +R ++ PQ + + G + +
Sbjct: 219 PQLESFLARLLEIETVRDIRLATKALAGLPQHWLQPQVVEGMSRVARTAASRGVNLAVHT 278
Query: 212 HANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRIKPY 269
H NH + A L +AG+ + +Q VL++G+N P+ L L E I PY
Sbjct: 279 HVNHAQSVTPLVAEAARALLDAGVRDVRNQGVLMRGVNATPDDLLELCFALQGEANILPY 338
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT--HNI 327
Y + D+ H+R ++ E Q + A++ + G P + D+P GK +
Sbjct: 339 YFYLCDMIPNAEHWRTSVAEAQDLQAAIMGYLPGYATPRIVCDVP-YVGKRWVHQVVEYD 397
Query: 328 KKVGNGSYCITDHH 341
+++G + ++
Sbjct: 398 RELGVSYWT-KNYR 410
>gi|330468030|ref|YP_004405773.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032]
gi|328811001|gb|AEB45173.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032]
Length = 467
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 77/373 (20%), Positives = 150/373 (40%), Gaps = 37/373 (9%)
Query: 4 RHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP------ 52
R + + + L ++ ++ + S+ + P + N + P P
Sbjct: 59 RVNCVKNVKQLRTVLGDTVDESFYADLEADQRAMATMSMLVPPQMINTMVPFAPPSTEAL 118
Query: 53 -NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
DPI R IP + P D + +++ +G+ HRYP ++L +LL CP
Sbjct: 119 LADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLATCPQ 178
Query: 108 YCRFCFRREMVGSQKGTV-------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
YC C R ++VG+ V +A + Y++ + +V+ +GGD + +
Sbjct: 179 YCGHCTRMDLVGNSTPAVDKLKLSLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANVPWR 238
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGKPVYIAIH 212
L+ L L I+ ++ +R ++ + PQ + + G + I H
Sbjct: 239 NLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAIHTH 298
Query: 213 ANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYY 270
NH + A + G+ + +Q VL++G+N + L +L E I PYY
Sbjct: 299 VNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVNATSKDLLDLCFGLQGEAGILPYY 358
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK--VKIDTHNIK 328
+ D+ H+R+ + Q++ + + G P + D+P GK V + T +
Sbjct: 359 FYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVPF-VGKRWVHMVTEYDR 417
Query: 329 KVGNGSYCITDHH 341
+ G + ++
Sbjct: 418 ERGISYWT-KNYR 429
>gi|145594793|ref|YP_001159090.1| radical SAM domain-containing protein [Salinispora tropica CNB-440]
gi|145304130|gb|ABP54712.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440]
Length = 491
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/373 (21%), Positives = 152/373 (40%), Gaps = 37/373 (9%)
Query: 4 RHKTLTSAQDLYNANL--IKK---EQIDEIKEISNHYSIALTPVIANLINP-----HNP- 52
R + + + L + + ++ ++ S+ +TP + N + P +
Sbjct: 83 RTNCVKNIKQLRTVLGDLVSETFYADLEADQKALATMSMLVTPQMLNTMVPFESMSTDAL 142
Query: 53 -NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
DPI R IP + P D + +++ +G+ HRYP ++L +LL CP
Sbjct: 143 YADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLSTCPQ 202
Query: 108 YCRFCFRREMVGSQKG-------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
YC C R ++VG+ T+ +A ++Y++ + +V+ +GGD + K
Sbjct: 203 YCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHISYLKAHPGVRDVVVSGGDVANVPWK 262
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGKPVYIAIH 212
L+ L L I V+ +R ++ + PQ + + G + I H
Sbjct: 263 NLETYLMRLLDIDTVRDIRLATKALMGLPQHWLRADVVEGLERVARTAARRGVNLAIHTH 322
Query: 213 ANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYY 270
NH + A + G+ + +Q VL++G+N L +L E I PYY
Sbjct: 323 VNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVNATTPDLLDLCFALQGEAGILPYY 382
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK--VKIDTHNIK 328
+ D+ H+R+ + Q++ + + G P + D+P GK V + T +
Sbjct: 383 FYMCDMIPNAEHWRVPVGHAQQLQHDIMGYLPGYATPRIVCDVPF-VGKRWVHMLTEYDQ 441
Query: 329 KVGNGSYCITDHH 341
+ G + ++
Sbjct: 442 ERGISYWT-KNYR 453
>gi|330508808|ref|YP_004385236.1| KamA family protein [Methanosaeta concilii GP-6]
gi|328929616|gb|AEB69418.1| KamA family protein [Methanosaeta concilii GP-6]
Length = 582
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 81/361 (22%), Positives = 149/361 (41%), Gaps = 27/361 (7%)
Query: 2 QLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHY-SIALTPVIANLINPHNPND---P 55
Q RH K + + + A + +E I+ ++ +TP +L++ P+D
Sbjct: 181 QFRHVFKDIQGLETIKRAIKLDEEHEASIRLALENHVPFGVTPHYLHLMDKE-PSDMDYA 239
Query: 56 IARQFIPQKEELNILPEEREDPIG------DNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
+ RQ P + + R+D + + SP+ I RYP ++K CP C
Sbjct: 240 VRRQVFPPLSYVENMIAHRKDKKWAFDFMRERDTSPIDLITRRYPRVAIVKPYESCPQIC 299
Query: 110 RFCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
+C R + S + + EAA+ + E ++ +V+ TGGDPL++ + ++L
Sbjct: 300 VYCQRNWEISSPLMASALAPMEKIEAAIDWFYEHEEMMDVLLTGGDPLVMDDSLIDRILN 359
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPYEFSEEA 223
L I H++ +R SR P PQR+ EL + L + + + H HPYE + E
Sbjct: 360 RLSQIPHLKSIRVASRTPATVPQRLTEELCEILGSYQELGRRNLCLVTHFMHPYEVTPET 419
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
+AAI R+ GI + +Q V N ++L ++ + PYY + +
Sbjct: 420 LAAIIRVKKTGIEIYNQQVF-TFANSRKFETSSLRIILKQIGVDPYYTFNMKGKTEMEDY 478
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFY-ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
+ I + + G+ + + ++PG GK +++ N
Sbjct: 479 AVPIARILQERKEEARLLPGIFRTDEPVFNVPG-LGK-----DHLRAWQNHELIGITSEG 532
Query: 343 I 343
Sbjct: 533 R 533
>gi|159037977|ref|YP_001537230.1| lysine 2,3-aminomutase [Salinispora arenicola CNS-205]
gi|157916812|gb|ABV98239.1| Lysine 2,3-aminomutase [Salinispora arenicola CNS-205]
Length = 467
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 78/373 (20%), Positives = 151/373 (40%), Gaps = 37/373 (9%)
Query: 4 RHKTLTSAQDLYNANL--IKK---EQIDEIKEISNHYSIALTPVIANLINPHNP------ 52
R + + + L + + ++ ++ S+ + P + N + P P
Sbjct: 59 RANCVKNIKQLRAVLGDLVSETFYADLEADQKALATMSMLVPPQMLNTMVPFAPMTTEAL 118
Query: 53 -NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
DPI R IP + P D + +++ +G+ HRYP ++L +LL CP
Sbjct: 119 YADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLSTCPQ 178
Query: 108 YCRFCFRREMVGSQKG-------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
YC C R ++VG+ T+ +A + Y++ + +V+ +GGD + +
Sbjct: 179 YCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANVPWR 238
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGKPVYIAIH 212
L+ L L I+ V+ +R ++ + PQ + + G + I H
Sbjct: 239 NLESYLMRLLDIETVRDIRLATKALMGLPQHWLRADVVEGLERVARTAARRGVNLAIHTH 298
Query: 213 ANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYY 270
NH + A + G+ + +Q VL++G+N L +L E I PYY
Sbjct: 299 VNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVNATTPDLLDLCFALQGEAGILPYY 358
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK--VKIDTHNIK 328
+ D+ H+R+ + Q++ + + G P + D+P GK V + T +
Sbjct: 359 FYLCDMIPNAEHWRVPVGYAQQLQHDIMGYLPGYATPRIVCDVPF-VGKRWVHMLTEYDR 417
Query: 329 KVGNGSYCITDHH 341
+ G + ++
Sbjct: 418 ERGISYWT-KNYR 429
>gi|326331434|ref|ZP_08197724.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium
Broad-1]
gi|325950690|gb|EGD42740.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium
Broad-1]
Length = 465
Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats.
Identities = 84/379 (22%), Positives = 159/379 (41%), Gaps = 43/379 (11%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEIKEI---SNHYSIALTPVIANLI-----NPHNP- 52
R + + + L +++ ++++ S+ + P + N + + +P
Sbjct: 52 RVNCIKNVRQLRALMGDLLEERFYADLEKDMAERATMSMLVPPQMVNTMVVSTSSTTDPS 111
Query: 53 -------NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101
DPI IP + P+ D + +++ +G+ HRYP ++L +L
Sbjct: 112 EFTDAFYADPIRHYMIPVFSDRRTDWPSHPQASRDSLHEHDMWVAEGLTHRYPTKVLAEL 171
Query: 102 LHVCPVYCRFCFRREMVGSQKG-------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
L CP YC C R ++VG+ T EA L Y++ Q+ +V+ +GGD
Sbjct: 172 LSTCPQYCGHCTRMDLVGNSTPVIDKLKLTGKPVDRHEAMLDYLRNTPQVRDVVVSGGDV 231
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKP 206
L RL+ L L I +++ +R ++ I PQ E + +E G
Sbjct: 232 ANLPWPRLEDFLTKLMAIDNIRDIRLATKGLIGLPQHWLQEPLLEGMSRVTSIARERGVS 291
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVE-L 264
+ + HANH + A L AG+ + +Q VLL G+N D L +L ++
Sbjct: 292 LAVHTHANHANSVTPLVAEASKALMAAGVRDVRNQGVLLAGVNADSHSLLDLCFRLLDGA 351
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID- 323
+I PYY + D+ + H+R+++ + Q++ + + G P + D+P GK +
Sbjct: 352 QIMPYYFYMCDMIPFSEHWRVSVADAQRMQHDIMGYLPGFATPRIVCDVPF-VGKRWVHQ 410
Query: 324 -THNIKKVGNGSYCITDHH 341
+ G + ++
Sbjct: 411 LADYDTERGISYWT-KNYR 428
>gi|289192520|ref|YP_003458461.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp.
FS406-22]
gi|288938970|gb|ADC69725.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp.
FS406-22]
Length = 620
Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats.
Identities = 82/368 (22%), Positives = 146/368 (39%), Gaps = 42/368 (11%)
Query: 2 QLRH--KTLTSAQDLYNA-----NLIKKEQIDEIKE-ISNHYSIALTPVIANLINPHNP- 52
Q ++ + L + L I E ++ I++ + N +TP +L + NP
Sbjct: 218 QFKNVLRGLKGVKILRELREETNFKISDEDLEIIEKAVKNGIPFGITPYYLHLFDFENPY 277
Query: 53 --NDPIARQFIPQKE------ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
+ + RQ IP + E D +G+++ SP+ + RY ++K
Sbjct: 278 VEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMGEHDTSPIDLVTRRYVTIAIIKPYES 337
Query: 105 CPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
CP C +C R MV + + E AL + E + E++ TGGDP LS K ++
Sbjct: 338 CPQICVYCQRNWMVQDFSEKAFPGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAIE 397
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
K+L + + HV +RF +R + P RI EL + L K V I+ H + YE + E
Sbjct: 398 KMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKSVMISTHVENCYEITPEV 457
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A+ +L I + +Q V + ++ E L ++ I PYY +P +
Sbjct: 458 KEAVKKLRTNNIYVYNQHVFHRYVSRRFE-NVALRIALKKVGIIPYYTFYPKGKMEHKDY 516
Query: 284 RLTIEE-GQKIVASLKEKISG--------LCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
+ I Q++ + + G P GK ++++ +
Sbjct: 517 LVPIARLAQEVKEEAR-LLPGSFRTDEPIFNVPRM--------GK-----NHLRAWQDRE 562
Query: 335 YCITDHHN 342
+
Sbjct: 563 LIAIKPNG 570
>gi|119716886|ref|YP_923851.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614]
gi|119537547|gb|ABL82164.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614]
Length = 468
Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats.
Identities = 81/378 (21%), Positives = 158/378 (41%), Gaps = 42/378 (11%)
Query: 4 RHKTLTSAQDLYNAN-LIKKE----QIDEIKEISNHYSIALTPVIANLINPHN------- 51
R + + + L + +E ++ + S+ + P + N + PH
Sbjct: 55 RAHCVKNVRQLRELLGDLVEERFYADLERDQAERATMSMLVPPQMMNTMVPHEVPAGPGS 114
Query: 52 -----PNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
DP+ IP + P D + +++ +G+ HRYP ++L +LL
Sbjct: 115 LTEAFYADPVRHYMIPVFSDRRTDWPSHPHATRDSLHEHDMWVAEGLTHRYPTKVLAELL 174
Query: 103 HVCPVYCRFCFRREMVGSQKGTV-------LSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
CP YC C R ++VG+ T+ + L Y++ Q+ +V+ +GGD
Sbjct: 175 PTCPQYCGHCTRMDLVGNSTPTIDKLKFVAKPNDRLGDMLDYLRRTPQVRDVVVSGGDVA 234
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPV 207
L RL+ L L I++++ +R ++ + PQ E + + G +
Sbjct: 235 NLPWPRLEDFLTRLLEIENIRDIRLATKALVGLPQHWLQEDVRAGMARVAGTARSRGVSL 294
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVE-LR 265
I HANH + A + + AG+ + +Q VLL G+N P+ L +L ++ +
Sbjct: 295 AIHTHANHANSITPLVADATAAMFEAGVRDVRNQGVLLNGVNAGPDALLDLCFRLLDGAQ 354
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID-- 323
I PYY + D+ + H+R+++ + Q++ + + G P + D+P GK +
Sbjct: 355 IMPYYFYMCDMIPFSEHWRVSVADAQRLQHHIMGYLPGFATPRIVCDVPF-VGKRWVHQV 413
Query: 324 THNIKKVGNGSYCITDHH 341
+ G + ++
Sbjct: 414 ADYDTERGISYWT-KNYR 430
>gi|325122955|gb|ADY82478.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus PHEA-2]
Length = 226
Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 120/222 (54%), Gaps = 2/222 (0%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C V+CR+CFRR + + ++D YI+ I E+I +GGDPL LS++
Sbjct: 1 MTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIEANPNINEIILSGGDPLTLSNR 58
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+L L+ L +K +QILR HSRVPIV P RI+ +LI LK + + + +H+NH E
Sbjct: 59 KLALWLERLSSLKQIQILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLVVHSNHASELD 118
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
+ + + +L++ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G
Sbjct: 119 DFTCSKLLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYLHVLDKVKGA 178
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
HF L + I + + G P + ++ G K +
Sbjct: 179 QHFDLESSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 220
>gi|261402967|ref|YP_003247191.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
vulcanius M7]
gi|261369960|gb|ACX72709.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
vulcanius M7]
Length = 621
Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats.
Identities = 81/369 (21%), Positives = 144/369 (39%), Gaps = 42/369 (11%)
Query: 2 QLRH--KTLTSAQDLYNA-----NLIKKEQIDEIKE-ISNHYSIALTPVIANLINPHNP- 52
Q ++ + L + L I + ++ I++ + N LTP +L + NP
Sbjct: 219 QFKNVLRGLKGVEILKKLREETNFKISDDDLEIIEKAVKNGIPFGLTPYYLHLFDFENPY 278
Query: 53 --NDPIARQFIPQKE------ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
+ + RQ IP + E + D +G+++ SP+ I RY ++K
Sbjct: 279 VEDLAVRRQVIPPEWYVEKMIEHKEDRDTAFDFMGEHDTSPIDLITRRYVTIAIVKPYES 338
Query: 105 CPVYCRFCFRREMVGSQKGTVLSS-KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
CP C +C R MV + E AL + E + E++ TGGDP LS K ++
Sbjct: 339 CPQICVYCQRNWMVQDFDAKAFKGWEKIEKALDWFAEHDSMIEILITGGDPFSLSDKAIE 398
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
++L + + HV +RF +R + P RI EL + L K + I+ H YE + E
Sbjct: 399 RMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKRIMISTHVESCYEITPEV 458
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A+ +L I + +Q V + ++ E L ++ I PYY +P +
Sbjct: 459 KDAVEKLNKNKIYVYNQHVFHRYVSRRFE-NVALRIALKKVGIIPYYTFYPKGKMEHKDY 517
Query: 284 RLTIEE-GQKIVASLKEKISG--------LCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
+ I Q++ + + G P GK ++++ +
Sbjct: 518 LVPIARLAQEVKEEAR-LLPGSFRTDEPIFNVPRM--------GK-----NHLRAWQDRE 563
Query: 335 YCITDHHNI 343
Sbjct: 564 LIAIKPDGG 572
>gi|227357432|ref|ZP_03841786.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906]
gi|227162390|gb|EEI47390.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906]
Length = 260
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 4/223 (1%)
Query: 6 KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ ++ +L ++ ++ + + + + + +PNDP+ Q +
Sbjct: 21 QAISDPVELLQLLALEHHAELQRGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAH 80
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E + P DP+ + + + G++H+Y +R LL + C V CR+CFRR
Sbjct: 81 AEFTLTPGFSTDPLDEQQ-NAVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYEDNKG 139
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + + A+ YI+ ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+
Sbjct: 140 --NKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQLEAIPHIKRLRIHSRL 197
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227
P+V P RI L Q L+++ + +H NH E + A
Sbjct: 198 PVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDDALREAC 240
>gi|330003195|ref|ZP_08304561.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3]
gi|328537036|gb|EGF63321.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3]
Length = 195
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 71/189 (37%), Positives = 104/189 (55%)
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR HSR+PIV P RI
Sbjct: 1 MDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRIHSRLPIVIPARITE 60
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + V + H NH E E AA++ L AG+ LL+QSVLL+G+ND+ + L
Sbjct: 61 TLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTL 120
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A+L + + PYYLH D G +HF ++ +E ++I+ L ISG P ++
Sbjct: 121 ADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTLISGYMVPKLAREIG 180
Query: 315 GGYGKVKID 323
G K +D
Sbjct: 181 GEPSKTPLD 189
>gi|291301420|ref|YP_003512698.1| lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728]
gi|290570640|gb|ADD43605.1| Lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728]
Length = 475
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 83/378 (21%), Positives = 153/378 (40%), Gaps = 42/378 (11%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEIKEISNH---YSIALTPVIANLINPH-------- 50
R + + L + D++ + S+ L P + N I P
Sbjct: 43 RVHCVKNVAQLRGVLGDRVDDAFYDDLAADGDKRATMSMLLPPQMLNTIAPTLETTAPGS 102
Query: 51 ----NPNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
DPI R +P + P D + +++ +G+ HRYP ++L +LL
Sbjct: 103 WTEAYYADPIRRYMLPVFSDRRTDWPSHPHATRDSLHEHDMWVAEGLTHRYPTKVLAELL 162
Query: 103 HVCPVYCRFCFRREMVGSQKGTV-------LSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
CP YC C R ++VG+ T+ +A + Y+Q + +V+ +GGD
Sbjct: 163 STCPQYCGHCTRMDLVGNSTPTIDKLKLKLKPMARYDAMIEYLQSHPGVRDVVVSGGDVA 222
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPV 207
+ K L+ + L I+ ++ +R ++ + PQ + + +E G +
Sbjct: 223 NVPWKNLENFISRLLEIESIRDIRLATKALMGLPQHWLQDDVVDGMGRVATVARERGVNL 282
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELR 265
I H NH + A + +AG+ + +Q VL+ G+N+ PE L +L E
Sbjct: 283 AIHTHVNHVQSLTPTVARAARAMLDAGVRDVRNQGVLMNGVNNSPEALLDLCFALQGEAN 342
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID-- 323
I PYY + D+ + H+R ++ E Q + ++ + G P I D+P GK +
Sbjct: 343 ILPYYFYMCDMIPNSEHWRTSVSEAQALQTAIMGYLPGYATPRIICDVPF-VGKRWVHQV 401
Query: 324 THNIKKVGNGSYCITDHH 341
+ G + ++
Sbjct: 402 GRYDAEHGISYWT-KNYR 418
>gi|284031530|ref|YP_003381461.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM
17836]
gi|283810823|gb|ADB32662.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM
17836]
Length = 490
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 76/394 (19%), Positives = 164/394 (41%), Gaps = 49/394 (12%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEI---KEISNHYSIALTPVIANLINPHNPND---- 54
R + + + L + +++ +++ + S+ L P + N I P D
Sbjct: 56 RSHCVKNVKQLRDVMGDLLEERVYEDLTRDQAERATMSMLLPPQMLNTIVPQGAADYTEA 115
Query: 55 ----PIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
P+ R +P ++ + P D + ++ +G+ HRYP ++L ++L CP
Sbjct: 116 FYADPVRRYMLPMFTDRRTDWPSHPHATRDSLHEHEMWATEGLTHRYPTKVLAEVLPTCP 175
Query: 107 VYCRFCFRREMVGSQKG-------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
YC C R ++VG+ T+ + + L Y++ + +V+ +GGD +
Sbjct: 176 QYCGHCTRMDLVGNSTPVIDKLKFTIKPQQRLDDMLDYLRRTPGVRDVVVSGGDVANMPW 235
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKPVYIAI 211
RL+ L +L I++++ +R ++ + PQ + ++ G V +
Sbjct: 236 PRLEAFLTSLLEIENIRDIRLATKALMGMPQHWLSDDVRAGVERVATIARQRGVMVAMHT 295
Query: 212 HANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVE-LRIKPY 269
H N + A + +AG+ + +Q VL++G+ND L +L ++ I PY
Sbjct: 296 HVNAAQSVTPLVAEATKAMFDAGLRDVRNQGVLMRGVNDSVPQLLDLCFALLDGATITPY 355
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--THNI 327
Y + D+ + H+R+++++ Q + + + G P + D+P GK + +
Sbjct: 356 YFYMCDMIPFSEHWRVSVKDAQHLQHGILGYLPGFATPRIVCDVP-YVGKRWVHQLSDYD 414
Query: 328 KKVGNGSYCITDHH-----------NIVHDYPPK 350
+ G + ++ N ++Y
Sbjct: 415 EVRGISYWK-KNYRTGIEQQDPEALNRTYEYYDP 447
>gi|218516316|ref|ZP_03513156.1| L-lysine 2,3-aminomutase protein [Rhizobium etli 8C-3]
Length = 195
Score = 224 bits (572), Expect = 2e-56, Method: Composition-based stats.
Identities = 115/195 (58%), Positives = 153/195 (78%)
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
LS +RL+ +++ L I HV+I+RFH+RVP+VDP++I+ LI LK +GK VY+A+HANHP
Sbjct: 1 LSPRRLRDIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHANHP 60
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHHPDL
Sbjct: 61 RELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHHPDL 120
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
A GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK I I+ G+G Y
Sbjct: 121 APGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVIGESVIRATGDGCYS 180
Query: 337 ITDHHNIVHDYPPKS 351
++D+ H YPP
Sbjct: 181 VSDYRGGEHSYPPAG 195
>gi|218661195|ref|ZP_03517125.1| hypothetical protein RetlI_17423 [Rhizobium etli IE4771]
Length = 320
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 142/291 (48%), Gaps = 11/291 (3%)
Query: 38 ALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
+T + I + + P +E D G++ ++ + G H+Y
Sbjct: 15 RVTRFYRDQIVKSGFFEQLKFIVEPSLKEFESP--GSLDTSGEHENTVVPGFQHKYEQTG 72
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
LL C YCR+CFR+ +VG + + + + + YI ++ V+ +GGDP +L
Sbjct: 73 LLLATDRCASYCRYCFRKRIVGQESSEIAN--EFAQIVEYIGSHLEMTNVLISGGDPFVL 130
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAGKPVYIAIHA 213
+L +L L H++ +RF +++ P+R L Q + EAGK I H
Sbjct: 131 RTGKLHGILDYLLPFTHLKSIRFGTKMLAYAPKRFEDPELGALFQRIHEAGKTAVIVTHF 190
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
+H E S +A +I L + G+ L+QSVLL +NDDPEILA+ T ++ I PYYL
Sbjct: 191 DHIGEISLDAERSIQSLRSHGVQFLNQSVLLAKVNDDPEILASTFATCHQMGIHPYYLFQ 250
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKID 323
G SHF++ ++ G +I + +++SG+ + YI + GK+++
Sbjct: 251 SRPVKGASHFQVPLDRGLEIAHGVSQRLSGVQKTFKYI--MSHYTGKIELL 299
>gi|15668815|ref|NP_247618.1| hypothetical protein MJ_0634 [Methanocaldococcus jannaschii DSM
2661]
gi|2496087|sp|Q58051|Y634_METJA RecName: Full=Uncharacterized KamA family protein MJ0634
gi|1591346|gb|AAB98629.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 620
Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats.
Identities = 82/368 (22%), Positives = 145/368 (39%), Gaps = 42/368 (11%)
Query: 2 QLRH-----KTLTSAQDLYNA--NLIKKEQIDEIKE-ISNHYSIALTPVIANLINPHNP- 52
Q ++ K + ++L I E ++ I++ + N LTP +L + NP
Sbjct: 218 QFKNVLRGLKGVKILRELREVTNFKISDEDLEIIEKAVKNGIPFGLTPYYLHLFDFENPY 277
Query: 53 --NDPIARQFIPQKE------ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
+ + RQ IP + E D +G+++ SP+ + RY ++K
Sbjct: 278 VEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMGEHDTSPIDLVTRRYVTIAIIKPYES 337
Query: 105 CPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
CP C +C R MV + E AL + E + E++ TGGDP LS K ++
Sbjct: 338 CPQICVYCQRNWMVQDFDAKAFPGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAIE 397
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
K+L + + HV +RF +R + P RI EL + L K + I+ H YE + E
Sbjct: 398 KMLNRIAEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKSLMISTHVESCYEITPEV 457
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A+ +L I + +Q V + ++ E L ++ I PYY +P +
Sbjct: 458 AEAVKKLRTNNIYIYNQHVFHRYVSRRFE-NVALRIALKKVGIIPYYTFYPKGKMEHKDY 516
Query: 284 RLTIEE-GQKIVASLKEKISG--------LCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
+ I Q++ + + G P GK ++++ +
Sbjct: 517 LVPIARLAQEVKEEAR-LLPGSFRTDEPIFNVPRM--------GK-----NHLRAWQDRE 562
Query: 335 YCITDHHN 342
+
Sbjct: 563 LIAIKPNG 570
>gi|325916984|ref|ZP_08179226.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937]
gi|325536835|gb|EGD08589.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937]
Length = 216
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 2/218 (0%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C V+CR+CFRR +++ + + A+ I + I EV+ +GGDPL L+ +L +
Sbjct: 1 CAVHCRYCFRRHFPYAEE--TAAREGWREAVDAIAADADIDEVLLSGGDPLSLASPKLAE 58
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
+ L I H++ LR HSR+P+V P R++ L+ L+ PV IHANH EF +
Sbjct: 59 LTDALAAIPHLKRLRIHSRLPVVLPARVDAPLLAWLRSLPWPVAFVIHANHANEFDADVD 118
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A+ L + G+ LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF
Sbjct: 119 TAMRALRDVGVQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFE 178
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ + + A L ++SG P + ++PG GK +
Sbjct: 179 VDDARARALHAELATRLSGYLVPRLVREIPGDTGKRPL 216
>gi|300786612|ref|YP_003766903.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32]
gi|299796126|gb|ADJ46501.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32]
Length = 456
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 85/387 (21%), Positives = 158/387 (40%), Gaps = 42/387 (10%)
Query: 4 RHKTLTSAQDLYNA-NLIKKE----QIDEIKEISNHYSIALTPVIANLINPH---NPN-- 53
R + +A+ L + +E + + S+ L P + N + P +P
Sbjct: 44 RVHCVRNAKQLRALMGDLLEERFYDDLLADQRELATMSMLLPPQMLNTMAPTAGTDPAKV 103
Query: 54 ------DPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103
DPI R +P + + P D + + ++G+ HRYP ++L +++
Sbjct: 104 TEAFYADPIRRYMLPVRSDRDATWPSHPHSERDSLHEAEMWVVEGLTHRYPTKVLAEMIS 163
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSS-------KDTEAALAYIQEKSQIWEVIFTGGDPLI 156
CP YC C R ++VG+ TV +A +AY+++ + +V+ +GGD
Sbjct: 164 TCPQYCGHCTRMDLVGNSTETVEKHKLTLKPVDRQDAMIAYLKKTPGVRDVVVSGGDVAN 223
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGKPVY 208
+ +L+ L L I V+ +R ++ PQ + + G +
Sbjct: 224 VPWPQLESFLMRLMDIDTVRDIRLATKALAALPQHWLQPKVVEGLERVAVTAQRRGVNLA 283
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRI 266
I H NH + A N G+ + +Q VL++G+N P L +L E I
Sbjct: 284 IHTHVNHAQSVTPLVAEAAQTALNVGVRDVRNQGVLMRGVNATPAALLDLCFALQGEANI 343
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--T 324
PYY + D+ H+R+++ E Q++ S+ + G P + D+P GK +
Sbjct: 344 LPYYFYMCDMIPNAEHWRVSVWEAQELQHSIMGYLPGYATPRIVCDVP-YVGKRWVHQLA 402
Query: 325 HNIKKVGNGSYCITDHH-NIVHDYPPK 350
+++G + ++ I H P
Sbjct: 403 EYDRELGISYWT-KNYRTGIEHSDPEA 428
>gi|257056184|ref|YP_003134016.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017]
gi|256586056|gb|ACU97189.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017]
Length = 459
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 87/387 (22%), Positives = 156/387 (40%), Gaps = 42/387 (10%)
Query: 4 RHKTLTSAQDLYNA-NLIKKE----QIDEIKEISNHYSIALTPVIANLINPH---NPN-- 53
R + + + L + +E + ++ S+ L P + N + PH +P
Sbjct: 49 RVHCVRNIKQLRAVMGDLLEERFYDDLAADQQQMATMSMLLPPQMLNTMAPHAGTDPAKV 108
Query: 54 ------DPIARQFIPQKE----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103
DPI R +P E P + D + + ++G+ HRYP ++L +LL
Sbjct: 109 TEAFYADPIRRYMLPVHSDRHPEWPSHPHSQRDSLHEAEMWVVEGLTHRYPTKVLAELLS 168
Query: 104 VCPVYCRFCFRREMVGSQKG-------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
CP YC C R ++VG+ T+ +A + Y++ + +V+ +GGD
Sbjct: 169 TCPQYCGHCTRMDLVGNSTPQVDKHRLTLKPVDRQDAMIDYLKRTPGVRDVVVSGGDVAN 228
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAGKPVY 208
+ +L+ L L I+ V+ +R S+ PQ + + G +
Sbjct: 229 VPWHQLEAFLMRLLDIETVRDIRLASKALAGLPQHWLQPKVVEGLARVAGTARRRGVNLA 288
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRI 266
I H NH + A G+ + +Q VL++G+N P L +L E I
Sbjct: 289 IHTHINHVQSVTPLVAEATRAALEVGVRDVRNQGVLMRGVNATPADLLDLCFALQGEANI 348
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--T 324
PYY + D+ H+RL + E Q++ ++ + G P + D+P GK +
Sbjct: 349 LPYYFYMCDMIPNAEHWRLAVWEAQELQHAIMGYLPGYATPRIVCDVP-YVGKRWVHQVA 407
Query: 325 HNIKKVGNGSYCITDHH-NIVHDYPPK 350
++ G + ++ I HD P
Sbjct: 408 EYDRERGVSYWT-KNYRTGIEHDDPEA 433
>gi|111019966|ref|YP_702938.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
gi|110819496|gb|ABG94780.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
Length = 440
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 79/366 (21%), Positives = 147/366 (40%), Gaps = 49/366 (13%)
Query: 3 LRHKTLT--SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPH-NPNDPIAR 58
L ++++ + L E +S ++ + + LI+ P+DPI R
Sbjct: 12 LAPRSISGDRLRKLVAERTGDPILGHEAHVVSQVLPFKVSSYVVDELIDWGRAPDDPIYR 71
Query: 59 QFIPQKEELNILPEERED--------------------------------PIGDNNHSPL 86
P ++ L I + + + ++
Sbjct: 72 LTFPHRDMLEIEHFDLIERAVAQGDRGTVRQAVDTVRAALNPHPGDQLSMNVPQHDDIDG 131
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L+ C YC +CFR ++ EA Y+ I
Sbjct: 132 SGMQHKYAETLLVFPRQGQTCHSYCGYCFRWAQFVDTPDLKMAMSGPEAMTRYLDLHPGI 191
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPE------- 195
+V+ TGGDPL++ + L L+ L +HV+ +R ++ P R+
Sbjct: 192 TDVLLTGGDPLVMRTELLASYLEPLLEPEREHVETIRIGTKAVSFWPYRLLAGPEADDLL 251
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L++ L AGK V + +H +H E ++ A A++RLA+ G +L +Q+ +++ +NDDP
Sbjct: 252 RLLERLTAAGKHVAMMLHLSHVAELQTDAARTALARLASTGAVLRAQAPVVRHVNDDPRT 311
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A+L + V R+ PYY+ +F L + I +++SGL + +
Sbjct: 312 WADLWQAQVRNRVVPYYMFVERDTGARPYFGLPLARAVDIYREALQRVSGLGRTARGPVM 371
Query: 314 PGGYGK 319
GK
Sbjct: 372 SASPGK 377
>gi|332975312|gb|EGK12210.1| hypothetical protein HMPREF9374_1621 [Desmospora sp. 8437]
Length = 377
Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 153/317 (48%), Gaps = 18/317 (5%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
+ + + ++ + ++P ++ L DP+A+QFIP E E+ G NNH
Sbjct: 13 EREMVLDVIGKFRTKMSPALSRLAKQS---DPVAKQFIPSPYEALDFGTEKPFEEGKNNH 69
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ G+ Y DR +L C YCR+CF++ + +S +D + A+ +I+ S+
Sbjct: 70 G-IYGLERVYEDRAVLTPYFECSAYCRYCFKKSRTLAGSAKRMSDEDIDKAIRFIESDSR 128
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I V+ TGGDPL+ + L+KVL + I H++ +R +R + P+++ P+L + +
Sbjct: 129 IRTVLITGGDPLV-DPRLLEKVLDKVFPIPHIRNIRIGTRNILFSPEKVTPDLAKMIARY 187
Query: 204 ----------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
K + I + NH E + E + A RL GI + Q VLLKGIND
Sbjct: 188 QQIDYDEPRKSKNISIGLSLNHVDELTPEVVRAYQRLIREGITVRGQVVLLKGINDSVSA 247
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+ L+ TF+ I PYYL H G HFR ++++G ++ L SG Y+
Sbjct: 248 MRELLETFLCTGIVPYYLFHCMPVVGAKHFRTSVQKGLDLLQELSPY-SGTTTFQYVYVT 306
Query: 314 PGGYGKVKIDTHNIKKV 330
P GK +I + +
Sbjct: 307 P--IGKHRIAPGHQLEY 321
>gi|226312788|ref|YP_002772682.1| hypothetical protein BBR47_32010 [Brevibacillus brevis NBRC 100599]
gi|226095736|dbj|BAH44178.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 421
Score = 218 bits (557), Expect = 7e-55, Method: Composition-based stats.
Identities = 86/355 (24%), Positives = 152/355 (42%), Gaps = 20/355 (5%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNH--YSIALTPVIANLINPHNPNDPIARQ----FIPQK 64
++ + + +E + +T A LI + ++P Q +P
Sbjct: 18 FEEFATIVGFTEAEKEERGALLEQSYMPFKVTRYYAELI--ASQSEPYRTQMINIVLPPP 75
Query: 65 EELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFR-REMVGSQ 121
+ R DP G+ ++ + + H+Y +LL + C C+FC++ E+
Sbjct: 76 G--VKPYKGRFDPYGNKSYRQDETAFLQHKYKKTLLLHIDDFCIANCQFCYKVNEIRHED 133
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-SHKRLQKVLKTLRYIKHVQILRF 180
G E A+ Y++ I V+FTGGDP L K++ TL +K ++++RF
Sbjct: 134 IGYTNIMDKAERAVQYLEAHPYIDNVLFTGGDPASFRKTSDLIKLISTLLSVKSIRLVRF 193
Query: 181 HSRVPIVDPQRINP-ELIQCL----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
++ DP R EL+ + GK V + NHP E S+ +I A L + G+
Sbjct: 194 ATKALAYDPARFLDGELLAFFDQVRQTPGKQVSVISQFNHPGEISDVSIQATQALLSVGV 253
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
+ Q +++G+ND E L +L R F++ RI YYL G + + ++E + VA
Sbjct: 254 QIRGQPAIIRGVNDSVETLIDLQRKFLDNRIISYYLTVFMPVRGVEQYAIPLDEAFRNVA 313
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
K + GL + +L +GK++I + H + DY P+
Sbjct: 314 ESKRNLGGLEK-KGVLLTSHDFGKLEICGFYPTAERPEKIVLKWHQAVGPDYLPE 367
>gi|315229952|ref|YP_004070388.1| lysine 2,3-aminomutase [Thermococcus barophilus MP]
gi|315182980|gb|ADT83165.1| lysine 2,3-aminomutase [Thermococcus barophilus MP]
Length = 647
Score = 218 bits (557), Expect = 8e-55, Method: Composition-based stats.
Identities = 84/388 (21%), Positives = 148/388 (38%), Gaps = 56/388 (14%)
Query: 4 RHKTLTSAQDLYN--ANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIA 57
R K L + ++L + +E + +++ + +TP +L + NP + +
Sbjct: 247 REKGLETLRELNELGIVKVPEEDLKQVEIAVKYGIPWGITPYYLHLWDFENPYKEDRHVR 306
Query: 58 RQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
RQ +P ++ + + RED +G+++ SPL I RY +LK CP C +
Sbjct: 307 RQVMPPTWYVSNMLQHREDREYYFDFMGEHDTSPLDLITRRYVTIAILKAYDTCPQICVY 366
Query: 112 CFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
C R V G+ EAA+ + E + +V+ TGGDPL LS K + K++ L
Sbjct: 367 CQRNWEVLEPFMAGSFPGWDKIEAAIEWFGEHESMLDVLITGGDPLALSDKIIDKIMSRL 426
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIA 225
HV +R+ SR+ + P RI L + L +P V I+ H YE + E
Sbjct: 427 SEFDHVVNIRWGSRIFVTVPMRITNSLAEILGSYIEPGKRNVSISTHFETAYEVTPEVAE 486
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
A ++ GI + +Q V + ++ E L ++ I PYY +P + +
Sbjct: 487 ATYKIRRQGIYIYNQLVYQRNVSRRFE-NVALRIALRKVGIDPYYTFYPKGKIEQKDYLV 545
Query: 286 TIEEGQKIVASLKEKISG--------LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCI 337
I + + G P GK ++++ +
Sbjct: 546 PIARVVQERKEEARLLPGQFRPDEPVFNVPRM--------GK-----NHLRAWQDRELVG 592
Query: 338 TDHHN----------------IVHDYPP 349
++ YP
Sbjct: 593 IRPDGSRIYLMHPWEKGISETKLYTYPD 620
>gi|302527347|ref|ZP_07279689.1| CmnP protein [Streptomyces sp. AA4]
gi|302436242|gb|EFL08058.1| CmnP protein [Streptomyces sp. AA4]
Length = 463
Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 82/387 (21%), Positives = 158/387 (40%), Gaps = 42/387 (10%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYS---IALTPVIANLINPH---NPN-- 53
R + + + L ++ +++ + + L P + N + PH +P
Sbjct: 51 RVHCVRNVKQLRALMGDLLEDRFYEDLLADQREMATMSMLLPPQMINTMAPHAGTDPAKV 110
Query: 54 ------DPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103
DPI R +P + + + P D + + ++G+ HRYP ++L +++
Sbjct: 111 TEAFYADPIRRYMLPVRSDRHPAWPSHPHAERDSLHEAEMWVVEGLTHRYPTKVLAEMIS 170
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLI 156
CP YC C R ++VG+ + K +A Y++ + +V+ +GGD
Sbjct: 171 TCPQYCGHCTRMDLVGNSTEQIEKHKLALKPVDRQDAMTDYLKRTPGVRDVVVSGGDVAN 230
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-----RINPEL---IQCLKEAGKPVY 208
+ +L+ L L I+ V+ +R ++ PQ ++ L + G +
Sbjct: 231 VPWPQLESFLMRLMDIETVRDIRLATKALAALPQHWLQPKVTEGLQRVALTAQARGVNLA 290
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRI 266
I H NH + A G+ + +Q VL++G+ND P L +L E I
Sbjct: 291 IHTHVNHAQSVTPLVAEAARTALQVGVRDVRNQGVLMRGVNDTPAALLDLCFALQGEANI 350
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--T 324
PYY + D+ H+R+ + E Q++ S+ + G P + D+P GK +
Sbjct: 351 LPYYFYMCDMIPNAEHWRVAVWEAQELQHSIMGYLPGYATPRIVCDVP-YVGKRWVHQLA 409
Query: 325 HNIKKVGNGSYCITDHH-NIVHDYPPK 350
+ +G + ++ I H+ P
Sbjct: 410 EYDRDLGISYWT-KNYRTGIEHEDPEA 435
>gi|317124916|ref|YP_004099028.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043]
gi|315589004|gb|ADU48301.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043]
Length = 483
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 81/381 (21%), Positives = 153/381 (40%), Gaps = 45/381 (11%)
Query: 4 RHKTLTSAQDLYNANL--IKKE---QIDEIKEISNHYSIALTPVIANLINPHNPN----- 53
R + + + L + + ++ + S+ + P + N + P
Sbjct: 41 RVNCVRNVKQLRSLMGDLLDDRFYTDLERDQAERATMSMLVPPQMLNTMVPATSAAMPAS 100
Query: 54 ----------DPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILL 99
DPI R +P + P D + +++ +G+ HRYP ++L
Sbjct: 101 GADFTEAFYADPIRRYMLPVFSDRRTDWPSHPFSSRDSLHEHDMWVAEGLTHRYPTKVLA 160
Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTV-------LSSKDTEAALAYIQEKSQIWEVIFTGG 152
+LL CP YC C R ++VG+ V +A LAY++ + +V+ +GG
Sbjct: 161 ELLPTCPQYCGHCTRMDLVGNSTPQVNKLKFDLKPVDRYDAMLAYLRNTPSVRDVVVSGG 220
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAG 204
D + K L+ L L I +++ +R ++ + PQ + + + G
Sbjct: 221 DVANMPWKNLESFLDRLLEIDNIRDIRLATKALMGLPQHWFADDVVEGVARVAATARARG 280
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVE 263
+ I H N+ + A + AG+ + +Q VL++GIND E L +L +
Sbjct: 281 VSLAIHTHVNNAQSVTPAVARASRAMLEAGVRDVRNQGVLMRGINDSTEQLLDLCFALAD 340
Query: 264 -LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
I PYY + D+ H+RL++ E Q++ S+ + G P + D+P GK +
Sbjct: 341 GASITPYYFYMCDMIPFAEHWRLSLAEAQRLQHSIMGYLPGFATPRIVCDVPF-VGKRWV 399
Query: 323 DT--HNIKKVGNGSYCITDHH 341
+ G + ++
Sbjct: 400 HQQDEYDTERGISYWR-KNYR 419
>gi|296108845|ref|YP_003615794.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
infernus ME]
gi|295433659|gb|ADG12830.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
infernus ME]
Length = 589
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 24/332 (7%)
Query: 2 QLRH-----KTLTSAQDLYNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINPHNP--- 52
Q ++ K L +DL + I +E + +++ N+ A+TP +L + P
Sbjct: 191 QFKNVIKGKKGLEILRDLKDIVKISEEDLTLLEKAIENNIPYAITPYYLHLFDFDQPYKY 250
Query: 53 NDPIARQFIPQKE----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
+ PI RQ IP + N E D +G+ + +P + I RY ++K CP
Sbjct: 251 DLPIRRQVIPPEHYINMMANAESREVFDYMGELDTTPEELITRRYVTIAIMKPYESCPQI 310
Query: 109 CRFCFRREMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
C +C R M+ E AL + +E + E++ TGGDPL LS ++K+++
Sbjct: 311 CVYCQRNWMIKDFGDKAFVGWDKVEKALKWFEEHESMIEILITGGDPLCLSDSSIKKIVE 370
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIAA 226
++ HV +RF +R + P RI L+ L K V ++ HA YE + E A
Sbjct: 371 RIKNFDHVIGVRFGTRTLLTAPMRITESLLDVLSILKDKKVIVSTHAESSYEITPEVKRA 430
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ L + I + +Q V + ++ E L ++ I PYY +P + +
Sbjct: 431 VELLGSKNIRVYNQHVYHRYVSRRFE-NVALRIALRKVGIIPYYTFYPKGKEEHRDYLIP 489
Query: 287 IEEGQKIVASLKEKISG--------LCQPFYI 310
I + V + G P
Sbjct: 490 IARIVQEVHEEARLLPGTFRTDEPIFNVPRLG 521
>gi|238059077|ref|ZP_04603786.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149]
gi|237880888|gb|EEP69716.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149]
Length = 469
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 81/374 (21%), Positives = 156/374 (41%), Gaps = 38/374 (10%)
Query: 4 RHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP------ 52
R + + + L ++ + ++ S+ + P + N + PH P
Sbjct: 60 RVNCIKNIKQLRAVLGDTVDESLYTDLAADQDAHATMSMLVPPQMINTMVPHAPPTTEAL 119
Query: 53 -NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
DPI R IP + P D + +++ +G+ HRYP ++L +LL CP
Sbjct: 120 LADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLSTCPQ 179
Query: 108 YCRFCFRREMVGSQKG-------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
YC C R ++VG+ T+ +A +AY++ + +V+ +GGD + +
Sbjct: 180 YCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHIAYLKAHPGVRDVVVSGGDVANVPWR 239
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGKPVYIAIH 212
L+ L L I+ ++ +R ++ + PQ + + G + I H
Sbjct: 240 NLESYLMRLLEIETIRDVRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAIHTH 299
Query: 213 ANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDD-PEILANLMRTFVELR-IKPY 269
NH + A + G+ + +Q VL++G+N P++L L R F + I PY
Sbjct: 300 VNHRQSITPLVAKAAQTALDVGVRDVRNQGVLMRGVNATAPDLLGPLFRPFRRKKKILPY 359
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK--VKIDTHNI 327
Y + D+ H+R+ + Q++ + + G P + D+P GK V + T
Sbjct: 360 YFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVPF-VGKRWVHMLTDYD 418
Query: 328 KKVGNGSYCITDHH 341
++ G + ++
Sbjct: 419 REHGISYWT-KNYR 431
>gi|311899414|dbj|BAJ31822.1| putative L-lysine 2,3-aminomutase [Kitasatospora setae KM-6054]
Length = 487
Score = 212 bits (541), Expect = 6e-53, Method: Composition-based stats.
Identities = 78/369 (21%), Positives = 144/369 (39%), Gaps = 41/369 (11%)
Query: 12 QDLYNANL--IKKEQIDEIKEISNHYS---IALTPVIANLINPHNP-----------NDP 55
+ L + DE+ ++ + + P + N + DP
Sbjct: 49 RQLRQVFGPLLTDRFYDELAADQREFATMSVLVPPQMLNTMAAGAELAPDAFTEAFLADP 108
Query: 56 IARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
+ R +P + + + P D + + ++G+ HRYP ++L +LL CP YC
Sbjct: 109 VRRYMLPVRSDRHPSWPSHPLAARDSLHEAQMWVVEGLTHRYPTKVLAELLSTCPQYCGH 168
Query: 112 CFRREMVGSQKGTVL-------SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C R ++VG V + E L Y++ + +V+ +GGD + RL+
Sbjct: 169 CTRMDLVGRSTPQVAKARLVLRPADREEQMLDYLKRTPSVRDVVVSGGDLANVPWPRLES 228
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKPVYIAIHANHP 216
L L + V+ +R S+ + PQ + + + + HANH
Sbjct: 229 FLLRLLELGSVRDIRLASKSVVGLPQHWLQPKVLSGVERVARLAARRSVNLAVHTHANHA 288
Query: 217 YEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHP 274
+ A L +AG+ + +Q VL++G+N P L +L E I PYY +
Sbjct: 289 ASVTPLVAEAARGLLDAGVRDVRNQGVLMRGVNATPTALLDLCFALQGEANILPYYFYLC 348
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT--HNIKKVGN 332
D+ H+RL + E Q + ++ + G P + D+P GK + + G
Sbjct: 349 DVIPNAEHWRLPLAEAQHLQEAILGYLPGYATPRLVADVP-DVGKRWVHQAVGYDRVRGI 407
Query: 333 GSYCITDHH 341
+ ++
Sbjct: 408 SYWT-KNYR 415
>gi|84496424|ref|ZP_00995278.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649]
gi|84383192|gb|EAP99073.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649]
Length = 484
Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats.
Identities = 78/383 (20%), Positives = 154/383 (40%), Gaps = 46/383 (12%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEIKEI---SNHYSIALTPVI----ANLINPHN--- 51
R + + L + ++ +++ S+ + P + + ++ +
Sbjct: 42 RAHCVKNVAQLRELMGDLLTEDFYADLERDQVERATMSMLVPPQMMNTMVSEMSWADGSM 101
Query: 52 -----------PNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
DP+ R +P + P D + +++ ++G+ HRYP +
Sbjct: 102 PAAGAAFTEAFLADPVRRYMLPVFSDRRTDWPSHPFAARDSLHEHDMWAVEGLTHRYPTK 161
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVL-------SSKDTEAALAYIQEKSQIWEVIF 149
+L ++L CP YC C R ++VG+ ++ A L Y+Q Q+ +V+
Sbjct: 162 VLAEMLPTCPQYCGHCTRMDLVGNSTAQIVKLKLAGKPVDRHAAMLDYLQRTPQVRDVVV 221
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLK 201
+GGD + K L+ L L I +++ +R ++ + PQ + +
Sbjct: 222 SGGDVANMPWKNLEGFLDKLMRIDNIRDIRLATKALMGLPQHWLQPDVVEGVARVSALAR 281
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRT 260
G + I H NH + A + AG+ + +Q VL++GIND + L +L
Sbjct: 282 SRGVSLAIHTHVNHAQSVTPLVADASKAMLEAGVRDVRNQGVLMRGINDTSKDLLDLCFA 341
Query: 261 FVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ I PYY + D+ + H+RL + E Q + S+ + G P + D+P GK
Sbjct: 342 LQDEAMITPYYFYMCDMIPFSEHWRLALHEAQHLQHSIMGYLPGFATPRIVCDVPF-VGK 400
Query: 320 VKIDTHNIKKVGNG-SYCITDHH 341
+ + G S+ ++
Sbjct: 401 RWVHQVDTYDRDKGMSFWRKNYR 423
>gi|256377785|ref|YP_003101445.1| lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
gi|255922088|gb|ACU37599.1| Lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
Length = 459
Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats.
Identities = 71/376 (18%), Positives = 147/376 (39%), Gaps = 40/376 (10%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYS---IALTPVIANLINP-----HN-- 51
R + + + L + +++ + + L P + N + P +
Sbjct: 50 RAHCVKNVKQLRAVLGDLVDDRFYADLEADQEQLATMSMLLPPQMLNTVVPRLGEGGDFT 109
Query: 52 ---PNDPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
DP+ R +P + + + P D + + ++G+ HRYP ++L +L+
Sbjct: 110 EAFYADPVRRYMLPVRSDRDPDWPSHPHSSRDSLHEAEMWVVEGLTHRYPTKVLAELVST 169
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157
CP YC C R ++VG+ V K + + Y++ + +V+ +GGD +
Sbjct: 170 CPQYCGHCTRMDLVGNSTPQVAKHKLALKPVDRQDRIVEYLKSTPGVRDVVVSGGDVANV 229
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGKPVYI 209
+L+ L L ++ V+ +R ++ PQ + + G + I
Sbjct: 230 PWPQLESFLMRLLGVETVRDVRLATKALAGLPQHWVQPQVVEGLERVARTAARRGVNLAI 289
Query: 210 AIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267
H NH + A G+ + +Q VL++G+N L +L E +
Sbjct: 290 HTHVNHANSVTPLVAEAARTALAVGVRDVRNQGVLMRGVNATATDLLDLCFALQGEAGVL 349
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--TH 325
PYY + D+ H+R+ + E Q++ ++ + G P + D+P GK +
Sbjct: 350 PYYFYMCDMIPNAEHWRVAVWEAQELQHAIMGYLPGYATPRIVCDVP-YVGKRWVHQVQE 408
Query: 326 NIKKVGNGSYCITDHH 341
++ G + ++
Sbjct: 409 YDRERGVSYWT-KNYR 423
>gi|6729659|emb|CAB67710.1| hypothetical protein [Streptomyces rochei]
Length = 403
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 82/348 (23%), Positives = 148/348 (42%), Gaps = 36/348 (10%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPH----NP--------NDPIARQFIPQKEELNI- 69
E + + S+ L P + N + P P +DP+ R +P + +
Sbjct: 14 EDWEWDRSHYATMSVLLPPQMINTMAPEVAAARPGELTKAFYDDPVRRYMMPVMSDRHPQ 73
Query: 70 ---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P D + + + ++G+ HRYP ++L +LL CP YC C R ++VG+ V
Sbjct: 74 WPSHPMASRDSLHEQDMWVVEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPQVT 133
Query: 127 SS-------KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S + LA+++ I +V+ +GGD + RL++ L L I ++ +R
Sbjct: 134 KSRLQLKPVDRADRILAHLRVSPGIRDVVVSGGDLANMPWPRLERFLDDLLEIDSIRDIR 193
Query: 180 FHSRVPIVDPQRINP--------ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
S+ I PQ N + + + G + + HAN + + A L
Sbjct: 194 LASKALIGLPQHWNSGPLLEGVARIARKARSRGVRIALHTHANAAQQVTPAVARAAWALL 253
Query: 232 NAGII-LLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEE 289
+AG+ + +Q VL++G+ND L +L + I PYY + D+ H+R+ +
Sbjct: 254 DAGLHDVRNQGVLMRGVNDSAHDLLDLCFALTDHAGITPYYFYMCDMIPNAEHWRVPLHR 313
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT--HNIKKVGNGSY 335
Q I + + G P + D+P GK +D +++G +
Sbjct: 314 AQLIQRQIMGYLPGFATPRIVCDVPMA-GKRWVDQTDSYDRELGVSHW 360
>gi|212224418|ref|YP_002307654.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1]
gi|212009375|gb|ACJ16757.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1]
Length = 636
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 77/364 (21%), Positives = 143/364 (39%), Gaps = 40/364 (10%)
Query: 5 HKTLTSAQDLYN--ANLIKKEQIDEIKEISN-HYSIALTPVIANLINPHNP---NDPIAR 58
K L ++L + +E ++E++ +TP +L + P + + R
Sbjct: 237 RKGLEILRELNELGIVKVPEEDLEEVERAVKYRIPWGITPYYLHLWDFKEPYKEDRHVRR 296
Query: 59 QFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
Q +P K ++ + R+D +G+++ SP+ + RY +LK CP C +C
Sbjct: 297 QVMPPKWYMDNMILHRKDREYAFDFMGEHDTSPIDLVTRRYVMIAILKAFDTCPQICVYC 356
Query: 113 FRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
R V G+ E A+ + E+ + +V+ TGGDP LS+K + K++ L
Sbjct: 357 QRNWEVLEPFMAGSFPGWDKIEKAIEWFGERESMIDVLITGGDPFALSNKIIDKIMSRLS 416
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAA 226
HV +R+ +R+P+ P R+ EL + L +P V ++ H YE + E A
Sbjct: 417 EFDHVINIRWGTRIPVTVPMRVTEELAEILGSYIEPGKRNVAVSTHVETAYEVTPEMARA 476
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ L GI + +Q V + ++ E L ++ I PYY +P + +
Sbjct: 477 VYNLRRQGIYVYNQLVYQRNVSRRFE-NVALRIALKKIGIDPYYTFYPKGKIEQRDYLVP 535
Query: 287 IEEGQKIVASLKEKISG--------LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
I + + G P GK ++++ +
Sbjct: 536 IARVIQERKEEARLLPGQFRTDEPIFNVPRM--------GK-----NHLRAWQDRELIAI 582
Query: 339 DHHN 342
Sbjct: 583 KPDG 586
>gi|302533021|ref|ZP_07285363.1| CmnP [Streptomyces sp. C]
gi|302441916|gb|EFL13732.1| CmnP [Streptomyces sp. C]
Length = 463
Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 82/358 (22%), Positives = 148/358 (41%), Gaps = 39/358 (10%)
Query: 4 RHKTLTSAQDLYNANL--IKKEQIDEIKE---ISNHYSIALTPVIANLINPHNP------ 52
R + A+ L + +E ++ + S+ L P + N +
Sbjct: 50 RAHCVKDAKGLRAVVGDLLDEEFYEDWERDRLHRATMSVLLPPQMINTMAAEASAARPGE 109
Query: 53 ------NDPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
+DP+ R +P + + P D + + + ++G+ HRYP ++L +LL
Sbjct: 110 LTKAFYDDPVRRYMLPVFSDRHPVWPSHPMASRDSLHEQDMWVVEGLTHRYPTKVLAELL 169
Query: 103 HVCPVYCRFCFRREMVGSQKGTVL-------SSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
CP YC C R ++VG+ V + E LA+++ I +V+ +GGD
Sbjct: 170 STCPQYCGHCTRMDLVGNSTPQVTKNRLQLKPADRAEQILAHLRATPGIRDVVVSGGDLA 229
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--------RINPELIQCLKEAGKPV 207
+ RL++ + L I+ ++ +R S+ I PQ R + + G V
Sbjct: 230 NMPWPRLERFVDGLLDIESIRDIRLASKGLIGLPQHWSSPPVLRGVERVAAKARSRGVRV 289
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVE-LR 265
+ HAN + + A L AG+ + +Q VL++G+ND L +L +
Sbjct: 290 ALHTHANAAQQVTSGVARAAWGLLGAGLHDVRNQGVLMRGVNDSAHDLLDLCFALCDHAG 349
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
I PYY + D+ H+R+ + Q I + + G P + D+P GK +D
Sbjct: 350 ITPYYFYMCDMIPNAEHWRVPLHSAQLIQRQIMGYLPGFATPRIVCDVPMA-GKRWVD 406
>gi|253989648|ref|YP_003041004.1| hypothetical protein PAU_02168 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781098|emb|CAQ84260.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 384
Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 81/331 (24%), Positives = 142/331 (42%), Gaps = 18/331 (5%)
Query: 33 NHYSIALTPVIANLINP-----HNPNDPIARQFIPQKEELNI-LPEEREDPIGDNNHSPL 86
N I +T I+ + P+ R P KE L + P E + D + P
Sbjct: 35 NLLPIKVTRFFQQKIDEEVATLGHTEGPLHRMVYPTKERLLVCAPGEVAYFVDDRENMPE 94
Query: 87 K---GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEK 141
I+ +Y +R L C +C++CFR++++ Q T + K +Y+
Sbjct: 95 DAPGNIIQKYRNRALFMPTSTCVSHCQYCFRQDVLSEQHETGKTVLDKAILELDSYLSMH 154
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL 200
I EVI +GGDP+ L + LQ ++ ++ V+ +R H++ PQ + E ++ L
Sbjct: 155 PDIQEVILSGGDPMTLPMESLQSIISAIKSHAQVKSIRIHTKTISYFPQVFKSDEKLRLL 214
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
AG + H HPYE E I R+ + GI +Q +L+ IND PE+L ++T
Sbjct: 215 ASAGVRLVF--HLTHPYELCEVVRKTIKRIQDTGIRCYNQFPILRQINDHPEVLRRHLKT 272
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL-KEKISGLCQPFYILDLPGGYGK 319
L I+ + PD ++ F +++ + I+ L S + +++D GK
Sbjct: 273 LDCLGIRNLSVFIPDPINFSALFSISLARLRNIINELNWRSPSWINSTRFVMDT--KVGK 330
Query: 320 VKIDTHNIKKVGNGS-YCITDHHNIVHDYPP 349
V++ ++ I + YP
Sbjct: 331 VRVRREDMTHYDAERGIAIFERDGKTIHYPD 361
>gi|213585072|ref|ZP_03366898.1| hypothetical protein SentesTyph_29075 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 219
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKP 206
V P RI EL+ ++
Sbjct: 200 VIPARITDELVARFDQSCLQ 219
>gi|289671289|ref|ZP_06492364.1| lysine 2,3-aminomutase [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 188
Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 103/185 (55%)
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
I I EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV P+R++ L+
Sbjct: 4 IAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLL 63
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
L++ PV +HANH EF AA+ L +AG LL+Q+VLL+G+ND + LA L
Sbjct: 64 AWLRQLPWPVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDALAAL 123
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ PYYLH D AG +HF + + + L ++SG P + ++PG
Sbjct: 124 SERSFAAGVLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIPGDT 183
Query: 318 GKVKI 322
GK +
Sbjct: 184 GKRPL 188
>gi|302539601|ref|ZP_07291943.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
[Streptomyces hygroscopicus ATCC 53653]
gi|302457219|gb|EFL20312.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
[Streptomyces himastatinicus ATCC 53653]
Length = 362
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 84/317 (26%), Positives = 135/317 (42%), Gaps = 20/317 (6%)
Query: 34 HYSIALTPVIANLINPHNPNDPIA-RQFIPQKEELNILPEEREDPIGDNNHSPLKG---- 88
++ ++P + I P Q++ E E + +G
Sbjct: 8 VFAEKISPYLRKKIEEAGEPLPFLDLQYVVDPSEAVEQTFEVARHYQSEMGTVFEGRELR 67
Query: 89 -IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ---EKSQI 144
+ Y +L++ +C +CR+C R G T LS +D E Y E +
Sbjct: 68 GVEKLYRRTLLVEPTTICAAHCRWCIR----GQYDTTTLSREDLEFIARYCGTAPENQDV 123
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
EV+ TGGDPLIL R++ +L L V+I+R +RVP+ DP+RI+ + L+
Sbjct: 124 REVLVTGGDPLILID-RIEWLLDALEEHAPQVEIVRIATRVPLQDPRRIDARMKHALRRR 182
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
V +A H NH E E A + L AG + Q+VLL+G+ND+ + L L
Sbjct: 183 STFRVEVATHINHKGELFPEVREAYAALQEAGARIYDQTVLLRGLNDNLDTLVELFDELR 242
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL--KEKISGLCQPFYILDLPGGYGKV 320
+ I+ +YL H G H R ++ EG ++ L SG +P + L GKV
Sbjct: 243 HMDIEAHYLFHCVPIRGMDHHRTSVAEGLELHRRLGASGLTSGRTRPHFTLMT--DVGKV 300
Query: 321 KIDTHNIKKVGNGSYCI 337
+ +I + +
Sbjct: 301 PLYEGSIIDRDEHNRIL 317
>gi|83859269|ref|ZP_00952790.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii
HTCC2633]
gi|83852716|gb|EAP90569.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii
HTCC2633]
Length = 481
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 72/365 (19%), Positives = 145/365 (39%), Gaps = 54/365 (14%)
Query: 21 KKEQIDEIKEI--SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
E++DE++ SN T +L + + EE+ L E DP
Sbjct: 61 SAEELDELEAAGISNRLPPRATGYYLDLAKRST---AVKNLIKARPEEMEDLSGE-ADPS 116
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
+SP+ G++H+Y + L+ ++ C +CR+C+R + + + G + YI
Sbjct: 117 NQLKYSPIPGLLHKY-ELCLVYVVRTCSSWCRYCYRSDFLTGKTGK--DTASIHEVKDYI 173
Query: 139 QEK------------SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ EV+ +GGDP++LS++ L L L V+++R ++
Sbjct: 174 ETHNAKVERGEITHKPKVREVLLSGGDPMVLSNRNLFDYLNGLAEAG-VEVIRIGTKEMA 232
Query: 187 VDPQRINPELIQCLKEAGKP-----VYIAIHANHPYEF-------------------SEE 222
P+R + + L + V +H HP EF +
Sbjct: 233 FYPERFDDNFFRMLDLFHEVHPQVLVAFMVHFTHPDEFLRLDVNGDYVRDERGRPLRNPL 292
Query: 223 AIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
A +RL + L +Q+ ++ G+NDD + L + + + + +Y G
Sbjct: 293 VEQAATRLRARPFVTLENQTPIIDGVNDDADALRLMQQELKRMGVNNHYFFQCREIEGFR 352
Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
F + +E+ K+ A + +SG+ + + L GK++ + V +G +
Sbjct: 353 AFAVPVEKAWKLHAESQHGLSGIERSRFA--LSTEAGKME-----MVSVIDGDERLRSLG 405
Query: 342 NIVHD 346
+ +
Sbjct: 406 GELGE 410
>gi|58426924|gb|AAW75961.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 202
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 65/179 (36%), Positives = 97/179 (54%)
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV P+R++ L+ L+
Sbjct: 24 IDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSL 83
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P +HANH EF A+ L + G LL+Q+VLL G+ND + LA L
Sbjct: 84 PWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFA 143
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ PYYLH D AG +HF + + + L ++SG P + ++PG GK +
Sbjct: 144 AGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATRLSGYLVPRLVREIPGDTGKRPL 202
>gi|293393237|ref|ZP_06637552.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582]
gi|291424383|gb|EFE97597.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582]
Length = 174
Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 89/168 (52%)
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L ++ L I H++ LR HSR+P+V P R+ L Q L + V + H NH
Sbjct: 1 MAKDHELDWLIGELEAIPHLKRLRIHSRLPVVIPARVTEALCQRLAASRLQVLMVTHINH 60
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
E ++++L AG+ LL+QSVLL+ INDD + LA L + I PYY+H D
Sbjct: 61 ANEIDAALSTSMAQLRRAGVTLLNQSVLLRHINDDADTLAALSNALFDAGILPYYIHVLD 120
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
G +HF ++ ++ ++I+ +L K+SG P ++ G K +D
Sbjct: 121 KVQGAAHFMVSDDQAREIMKALLSKVSGYLVPRLTREIGGEPSKTPLD 168
>gi|262045422|ref|ZP_06018445.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259037251|gb|EEW38499.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 174
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 89/168 (52%)
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L ++ L I HV+ LR HSR+PIV P RI L + + V + H NH
Sbjct: 1 MAKDHELDWLMTQLEAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNH 60
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
E E AA++ L AG+ LL+QSVLL+G+ND+ + LA+L + + PYYLH D
Sbjct: 61 ANEIDGEFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLD 120
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
G +HF ++ +E ++I+ L ISG P ++ G K +D
Sbjct: 121 RVQGAAHFMVSDDEAREIMRELLTLISGYMVPKMAREIGGEPSKTPLD 168
>gi|226327321|ref|ZP_03802839.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198]
gi|225204539|gb|EEG86893.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198]
Length = 174
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 89/168 (52%)
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L ++ L I H++ LR HSR+P+V P R+ L Q L+++ + +H NH
Sbjct: 1 MAKDDELDWLITQLEAIPHLKRLRIHSRLPVVIPARVTDALCQRLQQSRLQNIMVLHTNH 60
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
E + A S+L A + LL+Q VLL+G+ND E+LA+L R + + PYYLH D
Sbjct: 61 ANEMDDALREACSKLKKANVTLLNQGVLLRGVNDSAEVLADLSRALFDAGVMPYYLHVLD 120
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
G +HF + E ++I+ +L +SG P ++ G K +D
Sbjct: 121 KVQGAAHFMVPDSEAREIMKALMSLVSGYMVPKLTREIGGEPSKTLLD 168
>gi|251799361|ref|YP_003014092.1| hypothetical protein Pjdr2_5396 [Paenibacillus sp. JDR-2]
gi|247546987|gb|ACT04006.1| conserved hypothetical protein [Paenibacillus sp. JDR-2]
Length = 336
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 52/327 (15%)
Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
+ + + + +K+ + NLI+ +P DPI + I E P ++
Sbjct: 13 GLSEAERERLKK-----HFRVNDYYLNLIDWDDPKDPIRKHLIAAAGE---APHGIQEFT 64
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
+ G H Y +LL + +AYI
Sbjct: 65 WEAA-----GCKHIYQSMVLLPVSQAA---------------------------EGIAYI 92
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPEL 196
E ++I +V+ TG D L+L +L +++ LR I+H+ +R SR+P+ +P RI + L
Sbjct: 93 AEHNEIHKVVLTG-DSLMLGIAKLTSIIEQLRDIEHIGTIRLDSRMPVHNPMRIYEDHAL 151
Query: 197 IQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
++ L + P +Y+ NHP E + EA A + L AG+++L+Q+ ++KG+N+DP +
Sbjct: 152 LKMLSQFSSPEKRIYLMTTINHPRELTAEAKKAFNALHQAGVVVLNQTPIVKGVNNDPLL 211
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
L L+ + + PY + L+++ IV KE + L + +L +
Sbjct: 212 LGKLIDQLSQAGVSPYSFIINRPNSSYPESSLSLQTQFSIVQQAKELTAELGKRIRLL-M 270
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDH 340
YGKV++ + G + H
Sbjct: 271 AHDYGKVEL-----LDIEGGKAYVKYH 292
>gi|167624868|ref|YP_001675162.1| hypothetical protein Shal_2954 [Shewanella halifaxensis HAW-EB4]
gi|167354890|gb|ABZ77503.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
Length = 537
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 74/395 (18%), Positives = 134/395 (33%), Gaps = 61/395 (15%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK-- 64
+ N N I IDE + Y T N IN + P D + + PQ
Sbjct: 90 FREVCAILNKNGIDIGHIDEREFFVEVYRFLATRHSLNSINWDDYPTDSVFQLVFPQPGM 149
Query: 65 --EELNILPEEREDPIG--------DNNHSPLKG---------------------IVHRY 93
E + DP +P G H+Y
Sbjct: 150 INAETTQAYIDASDPKARTQVAIEYMEKTNPHDGNQQLNKPWFVNDEGVLEFLDGSQHKY 209
Query: 94 PDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
P L+ K C +C +CFR V + + KD Y++ ++ +++ TG
Sbjct: 210 PQCQLVFDKTTQNCFSFCTYCFRHAQVRGDEDMFI-QKDIAQLHEYLRRHKEVTDILITG 268
Query: 152 GDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPE-------LIQCLK 201
GD + RL++ + L HV+ +R +R P+ + E L ++
Sbjct: 269 GDGGYMPMSRLKQYVMPLIEDPSLLHVKNVRLATRALTFQPEIVLTEKYQPMLELFDTMR 328
Query: 202 EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGI------------N 248
+ G + H + P E + +AAI RL N G+ + SQS ++ I
Sbjct: 329 DNGVQLAWMAHFSTPRELLNPSTLAAIRRLQNHGVNIRSQSPMMNHISLFMDDKGGVDVE 388
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
+ +L L I + ++ ++ + + KI + ++ + +P
Sbjct: 389 RSSQSWIDLSNILGMLCIGFHSMYCARPTGEHHYYTAPLADMSKIFNRIYRSLASINRPS 448
Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
+ + GK+ I +I G + +
Sbjct: 449 RHISMTISAGKLAILGTSIV-NGEKCFALQFTEAR 482
>gi|224370563|ref|YP_002604727.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum
HRM2]
gi|223693280|gb|ACN16563.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum
HRM2]
Length = 819
Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 21/311 (6%)
Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68
T + L N I E +I ++ Y + + + +A Q++P KEELN
Sbjct: 127 TQVERLANQV-IPPEDTADINQVIETYPVRFSMHTVRQMRVSKS---VACQYLPFKEELN 182
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
+ IG + + Y +R++ L CPVYCRFCFR+
Sbjct: 183 SVGHTNT-WIGQFH---QGLLEQMYQNRVIFLLNMTCPVYCRFCFRKHKDSR-NEKNPGV 237
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
D A+A+++ I E++ TGGDP I + +++ ++ L+ I HV+ LR +R
Sbjct: 238 DDVSKAVAHVKNSPAIKEIVITGGDPFINRN-NMERAIQELKEIDHVETLRLATRSIAYY 296
Query: 189 PQRI---NPELIQCLK-------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
PQ N + LK + GK + +A H HP E S ++++ IS L GI +
Sbjct: 297 PQLFLKDNSRWLNYLKAKNLELMQKGKRIEVATHFIHPDEVSVQSLSIISDLVAGGIGVY 356
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASL 297
Q+ L+G ND+ L L + + +Y++ G S + + +G + L
Sbjct: 357 VQTPFLEGCNDNGPELVTLFQALRGAGAEIHYIYIPCSPIHGNSVYWSPLSKGIQAGRYL 416
Query: 298 KEKISGLCQPF 308
+ S P
Sbjct: 417 RAHASDRSIPR 427
Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 19/195 (9%)
Query: 132 EAALAYIQEKSQIWEVIFTGG--DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+A + YI+ + I++V+ DP + S R++++ TL+ ++HV LR S + P
Sbjct: 564 DADIDYIKSQRDIFDVVLVSKTKDP-VQSAARIRQLATTLKEVQHVNSLRIRSLDFVHHP 622
Query: 190 QRINPELIQCLKE-------AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
L++ L V I E + L GI
Sbjct: 623 DTYTSGLVETLGRLNCLSVANPLRVEIETWVVCADELTPRQQQITQALYRRGITTYFNVA 682
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLH------HPDLAAGTSHFRLTIEEGQKIVAS 296
L+ G+ND+ + + + T ++ ++++ + + +++ I
Sbjct: 683 LITGVNDNEDEIQKIAYTSRGFGMQFHHVYLAGLEIQNRMNGENK---VKVDDIFDIATR 739
Query: 297 LKEKISGLCQPFYIL 311
++ + SG P YI+
Sbjct: 740 VRREGSGREIPGYII 754
>gi|157376843|ref|YP_001475443.1| hypothetical protein Ssed_3711 [Shewanella sediminis HAW-EB3]
gi|157319217|gb|ABV38315.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
Length = 493
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 69/395 (17%), Positives = 134/395 (33%), Gaps = 61/395 (15%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEE 66
+ N N I IDE + Y T N IN + P D + + PQ
Sbjct: 48 FREVCAILNKNGIDIGAIDERELFVEVYRFLATRHTLNSINWDDYPTDSVFQLVFPQPGM 107
Query: 67 LNILPEER----------------------EDPIGDNNHSPL-----------KGIVHRY 93
++ ++ + P G H+Y
Sbjct: 108 IDEQTTQQYVGSPDAKARTQVAIDYMEKTNPHDGNQQLNKPWFVNDEGVLEFLDGSQHKY 167
Query: 94 PDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
P L+ K C +C +CFR V + + KD Y++ ++ +++ TG
Sbjct: 168 PQCQLVFDKTTQNCFSFCTYCFRHAQVRGDEDMFI-QKDIAQLHEYLRRHPEVTDILITG 226
Query: 152 GDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINP-------ELIQCLK 201
GD + RL++ + L HV+ +R +R P+ + EL ++
Sbjct: 227 GDGGYMPVSRLRQYVMPLIEDPSLLHVKNVRLATRALTFQPEMVLTEKYEPMLELFDTMR 286
Query: 202 EAGKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGI------------N 248
+ G + H + P E + IAAI RL N G+ + SQS ++ I
Sbjct: 287 DNGVQLAWMAHFSTPRELLNPSTIAAIRRLQNHGVNIRSQSPMMNHISLFKDEAGNVDVE 346
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
+ +L + + + ++ ++ + + KI + ++ + +P
Sbjct: 347 RSSQNWIDLATILGMMCVGFHSMYCARPTGEHHYYTAPLADMGKIFNRIYRSLASINRPS 406
Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
+ + GK+ I ++ G + +
Sbjct: 407 RHISMTISAGKLAILGTSVV-NGEKCFALQFTEAR 440
>gi|289524601|ref|ZP_06441455.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502159|gb|EFD23323.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 169
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E N E+ DP+ ++ ++P+ G VHRYPDR +L + C +YCRFC RR G +
Sbjct: 2 AERNTAVEDFHDPLAEDRYAPVPGFVHRYPDRGILLVTDQCSMYCRFCTRRRFAG-EIDR 60
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
S ++ +AA+ YI++ + +++ TGGDPL + L+ +L++LR I HV+I+R +RV
Sbjct: 61 PKSREEMQAAIDYIEKTEALRDILITGGDPLTMEDDNLEWLLRSLRRIPHVEIIRIGTRV 120
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
P V PQRI L+ LK+ P++I +H NHP E + + A++ LANAG
Sbjct: 121 PAVMPQRITNSLVTMLKKF-HPLWINVHFNHPKEITPHSARALNILANAG 169
>gi|289665700|ref|ZP_06487281.1| hypothetical protein XcampvN_22139 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 217
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + L + + + + + + + + +DP+ RQ +
Sbjct: 24 QQWRDAVRDPRVLLEQLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ +P D +GD G++ +Y R LL C V+CR+CFRR ++
Sbjct: 84 PLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A A I I EV+ +GGDPL L+ +L ++ L I H++ LR H
Sbjct: 144 E--TAARDGWREAGAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELI 197
SR+PIV P+R++ L+
Sbjct: 202 SRLPIVLPERVDAPLL 217
>gi|124003742|ref|ZP_01688590.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123990797|gb|EAY30264.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 424
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 73/338 (21%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 17 ANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEER 74
+ K Q D+ +SN + + + LI+ N DP+ R K L+ ++
Sbjct: 17 YGRLSKAQQDDFDLLSNIFYFKTNNYVLDQLIDWDNLETDPLFRLNFLHKNVLSEADYQQ 76
Query: 75 EDPIGDNNHS--------------------------------PLKGIVHRYPDRILLKLL 102
+ S +KG+ + + I L
Sbjct: 77 LLSLYQAGASIEVLQPFIELIRKKTTPQIPYDEKCFPTAGGERIKGLYRSFNNVISLFPD 136
Query: 103 H---VCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
C YC +CFR + + + S KD + + Y++ +I E +FTG DPL L+
Sbjct: 137 PMLKTCHAYCSYCFRWIAFNNSEVQSYTSYKDPQTPVTYLKANPEINETLFTGADPLTLT 196
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAGKPVYIA 210
++++ + L I V +RF+++ P R EL + + +G+ +
Sbjct: 197 AAKIKEYIDPLLTIDSVTTIRFNTKALTWWPFRFTTDKDAKNILELFKHIVASGRTLTFC 256
Query: 211 IHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H H E ++ I A+ + G ++ Q +++GIND E NL V L ++PY
Sbjct: 257 AHLTHVKELQNDNVIEAVKNIQATGAKIICQGPVVEGINDTIEDWVNLWSQEVALGLQPY 316
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
Y+ + FR+ + + I ++++ GL QP
Sbjct: 317 YMFVELNHNAEASFRIPLAKAVHIFQEAEKRVKGLQQP 354
>gi|302337139|ref|YP_003802345.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
gi|301634324|gb|ADK79751.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 818
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 24/328 (7%)
Query: 7 TLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
++ L + + E++++ Y + L+ + P+ +A Q++P
Sbjct: 121 SIGDVDQLVAKTNLMVPEAARTELQKVIETYPVRLSYHTIRQMLLS-PD--VAYQYMPFV 177
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EEL+ + IG + + Y +R++ L CPVYCRFCFR+
Sbjct: 178 EELDPVGHTNT-WIGQFH---QGLLEQMYQNRVIFLLNMSCPVYCRFCFRKHKESR-NEK 232
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ +D A+A++++ I E++ TGGDP L+ + + L I HVQ LR +R
Sbjct: 233 NPTVEDVNRAIAHVEKSPSIKEIVLTGGDPF-LNRSNMAAAIDGLMGIDHVQSLRLATRS 291
Query: 185 PIVDPQRINPE---LIQCLKE-------AGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
P+ + + LK+ GK + IA H HP E S E++ I+ L +G
Sbjct: 292 LAYYPELFLGKGEWYLNYLKQKNLELQLHGKRMEIATHFIHPDEVSPESLGIITELVKSG 351
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKI 293
I + Q+ L+ ND L L R + +Y++ G S + + +G I
Sbjct: 352 IAVYVQTPFLQHCNDTGPELQKLFRLLRGAGAEMHYIYIPCSPIHGNSVYWSPLSDGIDI 411
Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVK 321
L+ +S P P GK++
Sbjct: 412 AEYLRAHLSDRSVPKICTATP--IGKME 437
Score = 86.5 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 16/223 (7%)
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
EA + YI+ + I +VI L + ++ + I HV +R P+
Sbjct: 560 EADIDYIRSDTLISDVIIRTSSLLAEELHEISSLIGKIGTIDHVNAVRISLPEVNYAPES 619
Query: 192 INPELIQCLKEA-------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
I+P +IQ L + I + + +E A + RL N GI + + + LL
Sbjct: 620 ISPAMIQHLASCNRLTVSNPLRLEIETWFINANQITEMHSALVRRLNNKGITVYANTPLL 679
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLH---HPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
IND+P+ + NL + I+ ++L+ HP A + + + I + ++ +
Sbjct: 680 GEINDNPDEIYNLTYAYRRAGIEFHHLYVAGHPIQKAWNEKHPIDMYDVVDIASKIRREG 739
Query: 302 SGLCQPFYILDLPGG---YGKVKIDTHNIKKVGNGSYCITDHH 341
SG P YIL P G YG + + I G+ + +
Sbjct: 740 SGREGPRYILQTPLGDVYYG---LTSSFIHGGGDIRVKLDSYD 779
>gi|71277819|ref|YP_270271.1| hypothetical protein CPS_3603 [Colwellia psychrerythraea 34H]
gi|71143559|gb|AAZ24032.1| conserved domain protein [Colwellia psychrerythraea 34H]
Length = 555
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 65/394 (16%), Positives = 133/394 (33%), Gaps = 60/394 (15%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEE 66
++ AN I I+E + Y T N I+ N D + + +PQ
Sbjct: 110 FRRVVEILVANNIDIGDIEERELFIEVYRFLATKHSLNSIDWTNFYEDSVFQLVMPQPNM 169
Query: 67 LNI---------------------LPEEREDPIGDNNHSPL-----------KGIVHRYP 94
+N + + P G H+YP
Sbjct: 170 INKITVAEYLAASVAEKKVIVEEYQEKTSPHDGNQQLNKPWFENEQGEIEFLDGSQHKYP 229
Query: 95 DRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
L+ K C +C +CFR V + + K+ + Y++ ++ +++ TGG
Sbjct: 230 QCQLIFDKTTQNCFSFCTYCFRHAQVRGDEDMFI-QKEIDQIHRYLKVHEEVTDMLITGG 288
Query: 153 DPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRI----NPELIQCLKEAGK 205
D + R ++ + L R + H++ +R +R P+ I +++ +
Sbjct: 289 DGGYMPASRFEQYVTPLLEDRDLLHIKTVRLATRALTFQPEMILSSKYDKMLAVFDKMHD 348
Query: 206 ---PVYIAIHANHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN------------D 249
+ H + P E + IAAI RL G+++ SQS ++ I+
Sbjct: 349 NGIQLAWMAHFSTPRELLNPTTIAAIRRLQRHGVVIRSQSPMMNHISLFENKDGSIDIDR 408
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
+ +L + I + ++ +F + +I + ++ + +P
Sbjct: 409 SAQNWIDLSNILGTMLISFHSMYCARPTGEHHYFTAPLSAVSQIFDKIYRELPSINRPSR 468
Query: 310 ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
L + GK+ I G ++ +
Sbjct: 469 HLSMTTSAGKISIMGECEVG-GERAFALMFTEGR 501
>gi|163784748|ref|ZP_02179553.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879982|gb|EDP73681.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1]
Length = 250
Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 154 PLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-NP-------ELIQCLKEA 203
PLI+ L++ ++ + I H++ +R ++ P R +L + + +
Sbjct: 1 PLIMKTHVLKQYIEPILEANIPHLKTIRIGTKALGFWPYRFLTDNDAQELLDLFKKIVDK 60
Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
G + H NH E ++E A+ ++ G ++ +QS +L+ IND+P++ A + + V
Sbjct: 61 GYHLAYMAHFNHYKELETDEVKEAVQKIRETGAVIRTQSPILRHINDNPDVWAKMWKEQV 120
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ + PYY+ +F + I +I +K+SGL + + GK++I
Sbjct: 121 KQGMIPYYMFMARDTGAQHYFGVPIVRAWEIFREAYQKVSGLARTVKGPSMSATPGKIRI 180
Query: 323 DTHNIKKVGNGSYCITDH-HNIVHD 346
+ ++ Y + D D
Sbjct: 181 LG--VSEINGKKYIVLDFLQGRNPD 203
>gi|295401597|ref|ZP_06811565.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976364|gb|EFG51974.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 218
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 64/179 (35%), Positives = 100/179 (55%), Gaps = 11/179 (6%)
Query: 170 RYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAI 224
R I HV+I+RF S++P+ +P RI + EL+ ++ P +Y+ H NHP E +EEA
Sbjct: 2 RAIDHVKIIRFGSKLPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEAR 61
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A L +AG+I+++Q+ +LKGINDDPE+LA L+ + PYY AG S F
Sbjct: 62 KAFQALHDAGVIVVNQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDFV 121
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
LT+E+ +IV K + SGL + ++ + GK++I + NG + H +
Sbjct: 122 LTLEKVYQIVEQAKARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQSR 174
>gi|290474686|ref|YP_003467566.1| Arginine aminomutase (fragment) [Xenorhabdus bovienii SS-2004]
gi|289173999|emb|CBJ80786.1| Arginine aminomutase, putative (fragment) [Xenorhabdus bovienii
SS-2004]
Length = 244
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ EVI +GGDPL+L+ +L + L ++R I+ ++R HSR +P RI LI+ LK+
Sbjct: 31 SVEEVILSGGDPLMLTDNKLNESLASIREIRDDLLIRIHSRALTFNPYRITDALIETLKK 90
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+H HP+E SEE A+ R+ +A I+ S L+GIND+ + L L
Sbjct: 91 YRIN-AFGVHVCHPFELSEEFQTAVRRIQSAVPIVFSNMPFLRGINDNEKTLHKLFIDLY 149
Query: 263 ELRIKPYYLHHPDL-AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK-- 319
+ +KPYYL+H + G+S ++ +I + I++ LK +IS + P Y+ LP GK
Sbjct: 150 RMGVKPYYLYHFMPFSPGSSEYKASINDAISIMSKLKRRISNIALPEYV--LPHMKGKFT 207
Query: 320 VKI------DTHNIKKVGNGSYCITDHHNIVHDYPP 349
V + + G Y + N ++
Sbjct: 208 VPLFTHPQEMPYFETLNGKRYYRFINWQNEQCEWLD 243
>gi|229004623|ref|ZP_04162361.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
gi|228756664|gb|EEM05971.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
Length = 233
Score = 156 bits (396), Expect = 4e-36, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 12/203 (5%)
Query: 155 LILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPELIQCLKE---AG 204
+I++ ++ + L H++ +R ++ P R + EL+Q K+ +G
Sbjct: 1 MIMNASKIMHYISPLLEPEFDHIRNIRIGTKALTYWPNRFISDSDSEELLQFFKKIIDSG 60
Query: 205 KPVYIAIHANHPYEFS-EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
K + I H H E AI ++ + G I+ SQS ++ IN++PE L V+
Sbjct: 61 KSLAIMAHFTHWRELEAPLTQVAIKKIRDVGAIIRSQSPIIGHINNNPETWKILWEKQVQ 120
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
L I PYY+ +F++ + E I ++SGL + + YGK+++
Sbjct: 121 LGIIPYYMFVERDTGSNRYFQVPLIEAYNIYRDAISRVSGLARTARGPVMSTTYGKIEVQ 180
Query: 324 THNIKKVGNGSYCITDHHNIVHD 346
I+ +G + + D
Sbjct: 181 G-VIEILGVKYFTLRFLQARNID 202
>gi|295401598|ref|ZP_06811566.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976365|gb|EFG51975.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 154
Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ K +T+ + + I KE+ +++K+I+N Y + NLIN +PNDPI + IP
Sbjct: 3 QPKYITNIEKITQ---IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPN 59
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ ELN D + + + G H+Y LL + VC YCRFCFR+ + S
Sbjct: 60 EGELNE--YGSWDASDEEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVK 117
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
+S D + YI + +I V+ TGGD LIL+ K+
Sbjct: 118 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKK 153
>gi|213416979|ref|ZP_03350123.1| hypothetical protein Salmonentericaenterica_03062 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 141
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G+N
Sbjct: 1 PARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVN 60
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
D+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG P
Sbjct: 61 DNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPR 120
Query: 309 YILDLPGGYGKVKID 323
++ G K +D
Sbjct: 121 LAREIGGEPSKTPLD 135
>gi|328884100|emb|CCA57339.1| Lysine 2,3-aminomutase [Streptomyces venezuelae ATCC 10712]
Length = 431
Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 69/348 (19%), Positives = 119/348 (34%), Gaps = 54/348 (15%)
Query: 22 KEQIDEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQFIPQKEELNILPE------- 72
E + + +T +A+ L++ P+DP+ R +P + L
Sbjct: 20 PALAHEAEVVGQVLPFRVTSHVADELVDWTRAPDDPLYRLVMPHRGLLAPADFAAVERSL 79
Query: 73 ----------------EREDPIGDNNHSPLKGIVHRYPDRILLKLLH--VCPVYCRFCFR 114
ER DP + G+ HRYP+ +L+ C C C R
Sbjct: 80 RDGDRDRLRLVVDGLRERLDPHPAGRDAA--GLRHRYPETLLVLPGQGRTCHGPCASCSR 137
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI---------------LSH 159
EA + +I +V+F G P L
Sbjct: 138 WPRFAGDPVRGRELGGPEALGDRLDRHPEITDVLFAGV-PFAGGSGADPPDPPDPFELRT 196
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAGKPVYIAI 211
RL + L V+ +R +R P R L++ + +G+ + + +
Sbjct: 197 ARLAPYVTALLDRPGVRTVRIVTRAVSRFPGRFLDAPDADDLLRLLERVVASGRHLVLTL 256
Query: 212 HANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ HP E A A+ RLA G +L ++ +L+ +NDD + A + R L + PY
Sbjct: 257 YVCHPRELRPATARRALGRLAATGAVLRTRGAVLRRVNDDAALWARMWREQTALGLAPYG 316
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
+ FRL + ++ A ++ GL +P G
Sbjct: 317 MLVERGGGVRRCFRLPLARVLEVHAEALRRVPGLAGRVCGPVMPTELG 364
>gi|298375250|ref|ZP_06985207.1| KamA family protein [Bacteroides sp. 3_1_19]
gi|298267750|gb|EFI09406.1| KamA family protein [Bacteroides sp. 3_1_19]
Length = 704
Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 62/340 (18%), Positives = 112/340 (32%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--NDPIARQFI 61
+ S +L + E + + +TP +L+N + +D R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268
Query: 62 PQKEELNILPEEREDPIGDN---NHSPL---------KGIVHRYPDRILLKLLH---VCP 106
EL + ++ P I RYP+ +L C
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRSEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L +T L + YY +
Sbjct: 509 TAK-LRQTLNALGVVCYYTFSVKGFRENYAVYTPNSRSLQ 547
>gi|256839551|ref|ZP_05545060.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738481|gb|EEU51806.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 704
Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 62/340 (18%), Positives = 112/340 (32%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--NDPIARQFI 61
+ S +L + E + + +TP +L+N + +D R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268
Query: 62 PQKEELNILPEEREDPIGDN---NHSPL---------KGIVHRYPDRILLKLLH---VCP 106
EL + ++ P I RYP+ +L C
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRSEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L +T L + YY +
Sbjct: 509 TAK-LRQTLNALGVVCYYTFSVKGFRENYAVYTPNSRSLQ 547
>gi|150007262|ref|YP_001302005.1| hypothetical protein BDI_0607 [Parabacteroides distasonis ATCC
8503]
gi|149935686|gb|ABR42383.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 704
Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 62/340 (18%), Positives = 112/340 (32%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--NDPIARQFI 61
+ S +L + E + + +TP +L+N + +D R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268
Query: 62 PQKEELNILPEEREDPIGDN---NHSPL---------KGIVHRYPDRILLKLLH---VCP 106
EL + ++ P I RYP+ +L C
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L +T L + YY +
Sbjct: 509 TAK-LRQTLNALGVVCYYTFSVKGFRENYAVYTPNSRSLQ 547
>gi|255014113|ref|ZP_05286239.1| hypothetical protein B2_09392 [Bacteroides sp. 2_1_7]
Length = 706
Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 62/340 (18%), Positives = 112/340 (32%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--NDPIARQFI 61
+ S +L + E + + +TP +L+N + +D R +I
Sbjct: 211 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 270
Query: 62 PQKEELNILPEEREDPIGDN---NHSPL---------KGIVHRYPDRILLKLLH---VCP 106
EL + ++ P I RYP+ +L C
Sbjct: 271 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 330
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 331 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 390
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 391 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 450
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 451 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 510
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L +T L + YY +
Sbjct: 511 TAK-LRQTLNALGVVCYYTFSVKGFRENYAVYTPNSRSLQ 549
>gi|212694782|ref|ZP_03302910.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855]
gi|212662636|gb|EEB23210.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855]
Length = 703
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 70/340 (20%), Positives = 121/340 (35%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--ND-PIARQF 60
+ S +L + +E + + + +TP +L+NP +D I
Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ PQ E NI E+ED + D + I RYPD +L C
Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + L + YY +
Sbjct: 501 TAK-LRKVLNGLGVLCYYTFSVKGFEENYAVFTPNSRSLQ 539
>gi|237727246|ref|ZP_04557727.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434102|gb|EEO44179.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 703
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 70/340 (20%), Positives = 121/340 (35%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--ND-PIARQF 60
+ S +L + +E + + + +TP +L+NP +D I
Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ PQ E NI E+ED + D + I RYPD +L C
Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + L + YY +
Sbjct: 501 TAK-LRKVLNGLGVLCYYTFSVKGFEENYAVFTPNSRSLQ 539
>gi|262382166|ref|ZP_06075304.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262297343|gb|EEY85273.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 704
Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats.
Identities = 62/340 (18%), Positives = 112/340 (32%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--NDPIARQFI 61
+ S +L + E + + +TP +L+N + +D R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268
Query: 62 PQKEELNILPEEREDPIGDN---NHSPL---------KGIVHRYPDRILLKLLH---VCP 106
EL + ++ P I RYP+ +L C
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L +T L + YY +
Sbjct: 509 TAK-LRQTLNALGVVCYYTFSVKGFRENYAVYTPNSRSLQ 547
>gi|237710948|ref|ZP_04541429.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229454792|gb|EEO60513.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 697
Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats.
Identities = 70/340 (20%), Positives = 121/340 (35%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--ND-PIARQF 60
+ S +L + +E + + + +TP +L+NP +D I
Sbjct: 195 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 254
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ PQ E NI E+ED + D + I RYPD +L C
Sbjct: 255 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 314
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 315 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 374
Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L
Sbjct: 375 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 434
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 435 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 494
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + L + YY +
Sbjct: 495 TAK-LRKVLNGLGVLCYYTFSVKGFEENYAVFTPNSRSLQ 533
>gi|265750535|ref|ZP_06086598.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263237431|gb|EEZ22881.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 703
Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats.
Identities = 69/340 (20%), Positives = 120/340 (35%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--ND-PIARQF 60
+ S +L + +E + + + +TP +L+NP +D I
Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ PQ E NI E+ED + D + I RYPD +L C
Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+P+ P RIN EL+ L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + L + YY +
Sbjct: 501 TAK-LRKVLNGLGVLCYYTFSVKGFEENYAVFTPNSRSLQ 539
>gi|301310737|ref|ZP_07216676.1| KamA family protein [Bacteroides sp. 20_3]
gi|300832311|gb|EFK62942.1| KamA family protein [Bacteroides sp. 20_3]
Length = 704
Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 62/340 (18%), Positives = 112/340 (32%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--NDPIARQFI 61
+ S +L + E + + +TP +L+N + +D R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268
Query: 62 PQKEELNILPEEREDPIGDN---NHSPL---------KGIVHRYPDRILLKLLH---VCP 106
EL + ++ P I RYP+ +L C
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEVLKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRKGH 508
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L +T L + YY +
Sbjct: 509 TAK-LRQTLNALGVVCYYTFSVKGFRENYAVYTPNSRSLQ 547
>gi|75764491|ref|ZP_00743973.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74488018|gb|EAO51752.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 202
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D
Sbjct: 9 IMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAVPTFVVD 68
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
PGG GK+ + + + + + ++ YP S
Sbjct: 69 APGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 108
>gi|150005257|ref|YP_001300001.1| hypothetical protein BVU_2729 [Bacteroides vulgatus ATCC 8482]
gi|149933681|gb|ABR40379.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 703
Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats.
Identities = 69/352 (19%), Positives = 124/352 (35%), Gaps = 57/352 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ + +L + +E + + + +TP +L+NP ++ I
Sbjct: 201 AVKNPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260
Query: 61 IPQKE--EL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ + E NI E+ED + D + I RYPD +L C
Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQFRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +LK + + H +Q +R SR+P+ P RIN EL++ L
Sbjct: 381 QNKTLRNILKAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK--IVASLKEKIS 302
L + L + YY + + K+S
Sbjct: 501 TAK-LRKVLNGLGVLCYYTFSVKGFEENYAVFTPNSRSLQEKEEEKVWGKLS 551
>gi|331005683|ref|ZP_08329048.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989]
gi|330420506|gb|EGG94807.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989]
Length = 146
Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGII 236
+R HSR+P+V P RI E I+ + + + +H NH E + AIS++ NAGI
Sbjct: 1 MRIHSRLPVVIPDRITAESIEWMSQTRLATVMVLHINHAQELKNGILRTAISQMKNAGIT 60
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+L+QSVLLKGIND + A L T + + PYYLH D G++HF + + + +
Sbjct: 61 VLNQSVLLKGINDTLDTQAELSETLFDAGVLPYYLHVLDKVQGSAHFDTMDDRAKTLHKA 120
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
+ K+ G P + ++ K+ +
Sbjct: 121 MTAKLPGYLVPKLVREVAHEPSKITV 146
>gi|294777091|ref|ZP_06742548.1| KamA family protein [Bacteroides vulgatus PC510]
gi|294448960|gb|EFG17503.1| KamA family protein [Bacteroides vulgatus PC510]
Length = 703
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 69/352 (19%), Positives = 124/352 (35%), Gaps = 57/352 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ S +L + +E + + + +TP +L+NP ++ I
Sbjct: 201 AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260
Query: 61 IPQKE--EL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ + E NI E+ED + D + I RYPD +L C
Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK--IVASLKEKIS 302
L + L + YY + + K+S
Sbjct: 501 TAK-LRKVLNGLGVLCYYTFSVKGFEENYAVFAPNSRSLQEKEEEKVWGKLS 551
>gi|319643449|ref|ZP_07998072.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A]
gi|317384854|gb|EFV65810.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A]
Length = 576
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 68/352 (19%), Positives = 124/352 (35%), Gaps = 57/352 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ S +L + +E + + + +TP +L+NP ++ I
Sbjct: 74 AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 133
Query: 61 IPQKE--EL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ + E NI E+ED + D + I RYPD +L C
Sbjct: 134 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 193
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 194 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 253
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+P+ P RIN EL++ L
Sbjct: 254 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 313
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 314 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 373
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK--IVASLKEKIS 302
L + L + YY + + K+S
Sbjct: 374 TAK-LRKVLNGLGVLCYYTFSVKGFEENYAVFAPNSRSLQEKEEEKVWGKLS 424
>gi|254883725|ref|ZP_05256435.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254836518|gb|EET16827.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 703
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 68/352 (19%), Positives = 124/352 (35%), Gaps = 57/352 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ S +L + +E + + + +TP +L+NP ++ I
Sbjct: 201 AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260
Query: 61 IPQKE--EL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ + E NI E+ED + D + I RYPD +L C
Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+P+ P RIN EL++ L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK--IVASLKEKIS 302
L + L + YY + + K+S
Sbjct: 501 TAK-LRKVLNGLGVLCYYTFSVKGFEENYAVFAPNSRSLQEKEEEKVWGKLS 551
>gi|329961990|ref|ZP_08300001.1| KamA family protein [Bacteroides fluxus YIT 12057]
gi|328530638|gb|EGF57496.1| KamA family protein [Bacteroides fluxus YIT 12057]
Length = 698
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 117/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ S +L + E + + + TP +L++ ++ +
Sbjct: 201 AVKSPAELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLDCTGSGYDDEALRSYI 260
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ PQ E I ERED + + + I RYP+ +L C
Sbjct: 261 LYSPQLVETYGQIHAWEREDTVEEGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320
Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S + T+ + E +AY +E +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKESWEKKLRRLMAYFEEDAQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIKH-----------------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L + + +Q +R SR+P P RIN EL++ L
Sbjct: 381 QNKTLRNILDAVYRMASRKRKANLERPEGEKYAELQRIRLGSRLPAYLPMRINDELVEIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA I +L AG ++ +Q V +
Sbjct: 441 REFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + +L + YY
Sbjct: 501 TTR-LRQILNQLGVVCYYTF 519
>gi|325970018|ref|YP_004246209.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy]
gi|324025256|gb|ADY12015.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy]
Length = 710
Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats.
Identities = 64/337 (18%), Positives = 118/337 (35%), Gaps = 59/337 (17%)
Query: 5 HKTLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANLIN------PHNP--N 53
H + SA DL + ++ + ++E I TP +LI+ NP +
Sbjct: 222 HFAIRSADDLNLYLAHSMDEKTLSLMREAQAKGIPIFATPYFLSLIDTRPLEKRENPRSD 281
Query: 54 DPIARQFIPQKE---EL-NILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
+ I K+ E +I+ E+ED P P + RYP+ +
Sbjct: 282 EAIRSYLFYSKDLVQEFGSIVAWEKEDIARPGEPNAAGWLLPSHNVHRRYPNVAIFIPDT 341
Query: 104 ---VCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTG 151
C C +C R + + K + L Y + +W+++ TG
Sbjct: 342 MGRACGGLCSYCQRMYDFQGGRFNFELEKLRPKKSWQEQLEQNMEYFRNDPYLWDILITG 401
Query: 152 GDPLILSHKRLQKVLKTLRYI-----------------KHVQILRFHSRVPIVDPQRINP 194
GD + S K L+ +L + + ++ +R +++P+ PQR+
Sbjct: 402 GDAFMSSVKSLKNILDAVLAMARQKIEDNEARSPEEQYAPMRRVRLGTKIPVYLPQRVTA 461
Query: 195 ELIQCLKEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
EL+Q L + K + H + E + E A+ RL +G + +Q V
Sbjct: 462 ELVQVLADFKKKAALVGIDQCVVQTHVSSAMEITPETRKAVKRLLASGWAVTNQEVFTVA 521
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
+ L + ++ + PYY
Sbjct: 522 ASRRGHSAK-LRKVLNDIGVLPYYNFSVKGFKENRDL 557
>gi|319901443|ref|YP_004161171.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108]
gi|319416474|gb|ADV43585.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108]
Length = 697
Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 70/340 (20%), Positives = 121/340 (35%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPND-PIARQF 60
+ S +L + E + + + TP +L+N P+ +D +
Sbjct: 201 AIKSPTELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTPNGYDDEALRSYI 260
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ PQ E I ERED + + + I RYP+ +L C
Sbjct: 261 LYSPQLVETYGQIHAWEREDIVEEGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320
Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S + T+ + E L Y +E +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLHPKESWEKKLRRLMNYFEEDAQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L + + +Q +R SR+P P RIN EL++ L
Sbjct: 381 QNKTLRNILDAVYRMAARKRKANEERPEGEKYAELQRIRLGSRLPAYLPMRINDELVEIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
K+ + I H P E + EA I +L +AG ++ +Q V +
Sbjct: 441 KKFKEKASTIGIRQFIIQTHFQTPLEVTPEAAKGIHKLLSAGWLIDNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + +L + YY + +
Sbjct: 501 TAR-LRQILNQLGVVCYYTFSVKGFEENNAVFTPNSRSVQ 539
>gi|1369901|dbj|BAA12848.1| yjeK [Buchnera aphidicola]
gi|2827006|gb|AAC38098.1| 39-kDa hypothetical protein [Buchnera aphidicola]
Length = 144
Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 54/133 (40%), Positives = 77/133 (57%)
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P RI +L Q + + I H NHP E +E+ ++ +L + +ILL+
Sbjct: 1 IHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDSLLKLKKSNVILLN 60
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLK IND+ ILA L E I PYYLH D GTSHF ++ ++ + I++ L +
Sbjct: 61 QSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVSNKKAKSIISDLMK 120
Query: 300 KISGLCQPFYILD 312
ISG P + D
Sbjct: 121 MISGFLVPRLVFD 133
>gi|330995846|ref|ZP_08319742.1| KamA family protein [Paraprevotella xylaniphila YIT 11841]
gi|329574377|gb|EGG55948.1| KamA family protein [Paraprevotella xylaniphila YIT 11841]
Length = 707
Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 60/321 (18%), Positives = 115/321 (35%), Gaps = 57/321 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--NDP-IARQF 60
+ SA +L + E + ++ + +TP +L+NP +D I
Sbjct: 200 AVKSAAELNRMLGGTLSGETMRVYQQAQEKGIPVFVTPYYLSLLNPTGKGYDDAAIRSYV 259
Query: 61 IPQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VC 105
I L ERED + + + I RYP+ +L C
Sbjct: 260 IYSSR-LVETFGGIRAWEREDIVEEGKPNVAGWLLPGGHNIHRRYPEVAILIPDTMGRAC 318
Query: 106 PVYCRFCFRREMVGS-----QKGTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDPLI 156
C C R S + + ++ + Y + +QI +++ TGGD L+
Sbjct: 319 GGLCASCQRMYDFQSRRLNFELEKLKPKENWNTRLRKLMDYFEHDTQIRDILITGGDALM 378
Query: 157 LSHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQC 199
+ L+ +L + + +Q +R +R+P+ P R++ EL+
Sbjct: 379 SRNATLRNILDAVCKMAVRKRQANLSRPDGEKYAELQRVRLGTRLPVYLPMRVDDELLDI 438
Query: 200 LKEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
L++ + +++ H P E + E+ AI R+ + G + +Q V +
Sbjct: 439 LRDFRQKAAEAGITQLFVQTHFQSPLEVTPESREAIRRILSTGWAVTNQLVYNVAASRRG 498
Query: 252 EILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 499 HTAK-LRKVLNSLGVICYYTF 518
>gi|332877293|ref|ZP_08445041.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684676|gb|EGJ57525.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 707
Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 60/321 (18%), Positives = 115/321 (35%), Gaps = 57/321 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP--NDP-IARQF 60
+ SA +L + E + ++ + +TP +L+NP +D I
Sbjct: 200 AVKSAAELNRMLDGTLSGETLRIYQQAQEKGIPVFVTPYYLSLLNPTGKGYDDAAIRSYV 259
Query: 61 IPQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VC 105
I L ERED + + + I RYP+ +L C
Sbjct: 260 IYSSR-LVETFGGIRAWEREDIVEEGKPNVAGWLLPGGHNIHRRYPEVAILIPDTMGRAC 318
Query: 106 PVYCRFCFRREMVGS-----QKGTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDPLI 156
C C R S + + ++ + Y + +QI +++ TGGD L+
Sbjct: 319 GGLCASCQRMYDFQSRRLNFELEKLKPKENWNTRLRKLMDYFEHDTQIRDILITGGDALM 378
Query: 157 LSHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQC 199
+ L+ +L + + +Q +R +R+P+ P R++ EL+
Sbjct: 379 SRNATLRNILDAVCKMAVRKRQANLSRPDGEKYAELQRVRLGTRLPVYLPMRVDDELLDI 438
Query: 200 LKEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
L++ + +++ H P E + E+ AI R+ + G + +Q V +
Sbjct: 439 LRDFRQKAAEAGITQLFVQTHFQSPLEVTPESREAIRRILSTGWAVTNQLVYNVAASRRG 498
Query: 252 EILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 499 HTAK-LRKVLNSLGVICYYTF 518
>gi|218260892|ref|ZP_03475966.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii
DSM 18315]
gi|218224314|gb|EEC96964.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii
DSM 18315]
Length = 703
Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats.
Identities = 65/380 (17%), Positives = 123/380 (32%), Gaps = 83/380 (21%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI 61
S +L + +D + +TP +L+N + +D R +I
Sbjct: 208 AFKSPTELNYFLGGSLSAGTMDLLARARKKGMPFFVTPYYLSLLNTNTSGYDDATIRSYI 267
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKG--------------IVHRYPDRILLKLLH---V 104
EEL + + G I RYP+ +L
Sbjct: 268 LYSEELVDT--YGRIKAWEKEDIVVSGQPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRA 325
Query: 105 CPVYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPL 155
C C C R S++ ++ + + + Y +E +Q+ +++ TGGD L
Sbjct: 326 CGGLCASCQRMYDFQSERLNFDFESLKPKEAWDKKLRRLMRYFEEDAQLRDILITGGDAL 385
Query: 156 ILSHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQ 198
+ + L +L + + +Q +R SR+ P RI EL+
Sbjct: 386 MSQNATLCNILDAVYKMAVRKRKANESRPKGEKYAELQRVRLGSRLLAYLPLRITDELVD 445
Query: 199 CLKEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
L+ I H P E + EA AI + +AG I+ +Q V +
Sbjct: 446 ILRSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAIEAILSAGWIITNQMVYTVAASRR 505
Query: 251 PEILANLMRTFVELRIKPYYLHHPDL--------AAGTSHFR----------LTIEEGQK 292
L +T + + YY + + + E+ ++
Sbjct: 506 GHAAK-LRQTLNAMGVVCYYTFSVKGFHENYAVFTPNSRSLQKQQEEKIFGLIPKEKQKE 564
Query: 293 IVASLK------EKISGLCQ 306
+ ++ +K+SG +
Sbjct: 565 LYRLIRYERPLGKKLSGFLK 584
>gi|154492755|ref|ZP_02032381.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC
43184]
gi|154087060|gb|EDN86105.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC
43184]
Length = 703
Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats.
Identities = 66/380 (17%), Positives = 124/380 (32%), Gaps = 83/380 (21%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI 61
S +L + +D + +TP +L+N + +D R +I
Sbjct: 208 AFKSPTELNYFLGGSLSAGTMDLLARARKKGMPFFVTPYYLSLLNTNTSGYDDATIRSYI 267
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKG--------------IVHRYPDRILLKLLH---V 104
EEL + + G I RYP+ +L
Sbjct: 268 LYSEELVDT--YGRIKAWEKEDIVVSGQPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRA 325
Query: 105 CPVYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPL 155
C C C R S++ ++ + + + Y +E +Q+ +++ TGGD L
Sbjct: 326 CGGLCASCQRMYDFQSERLNFDFESLKPKETWDKKLRRLMRYFEEDAQLRDILITGGDAL 385
Query: 156 ILSHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQ 198
+ + L+ +L + + +Q +R SR+ P RI EL+
Sbjct: 386 MSQNATLRNILDAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRITDELVG 445
Query: 199 CLKEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
L+ I H P E + EA AI + +AG I+ +Q V +
Sbjct: 446 ILRSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAIEAILSAGWIITNQLVYTVAASRR 505
Query: 251 PEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFR-----------------LTIEEGQK 292
L +T + + YY + F + E+ ++
Sbjct: 506 GHTAK-LRQTLNAMGVVCYYTFSVKGFHENYAVFAPNSRSLQEQQEEKVFGLIPKEKQKE 564
Query: 293 IVASLK------EKISGLCQ 306
+ ++ +K+SG +
Sbjct: 565 LYRLIRYERPLGKKLSGFLK 584
>gi|213584604|ref|ZP_03366430.1| hypothetical protein SentesTyph_26615 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 125
Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 64/118 (54%)
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ + H NH E E A+ +L + G+ LL+QSVLL+G+ND+ + LANL +
Sbjct: 2 QILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAG 61
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ PYYLH D G +HF +T +E ++I+ L +SG P ++ G K +D
Sbjct: 62 VMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 119
>gi|291515343|emb|CBK64553.1| L-lysine 2,3-aminomutase [Alistipes shahii WAL 8301]
Length = 699
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 69/352 (19%), Positives = 124/352 (35%), Gaps = 57/352 (16%)
Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDP-IARQF 60
+ S +L + E + + + TP +L++ +D I
Sbjct: 203 AVKSPSELNRFLAGSLSSETMYLLSKARKKGMPFFATPYYLSLLDVTGGGYDDAAIRSYI 262
Query: 61 I--PQKEEL--NILPEERED------PIGDNNHSPL-KGIVHRYPDRILLKLLH---VCP 106
+ PQ E I ERED P P I RYP+ +L C
Sbjct: 263 LYSPQLVETYGQIRAWEREDVVEAGRPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + + + Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFETLRPKESWDHKLRRLMNYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+P P R+N EL++ L
Sbjct: 383 QNKTLRNILEAVCRMAGRKRRANARRPDGEKYAELQRVRLGSRLPAYLPMRVNDELVEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG ++ +Q V +
Sbjct: 443 REFHEKASAVGVKQFVIQTHFQTPLEVTPEAEEAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ--KIVASLKEKIS 302
L + L + YY ++ + +++
Sbjct: 503 TTR-LRQVLNSLGVVCYYTFSVKGFQENYAVFTPNSRSMQEQVEEKVYGRLT 553
>gi|332975102|gb|EGK12007.1| lysine 2,3-aminomutase [Desmospora sp. 8437]
Length = 189
Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ +T + + I +E+ +++ +I+N + L +LI+ ++PNDPI + IP +
Sbjct: 14 PRYITDIRKIQE---IPEEKREKLTKITNKFVFRLNDYYLSLIDWNDPNDPIYKLIIPSE 70
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL+ + D + + + G H+Y LL + VC YCRFCFR+ + +
Sbjct: 71 AELDE--YGKWDASDEYTNYVVPGCQHKYQTTALLIVSEVCGAYCRFCFRKRLFRNDVHE 128
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGG---DP 154
+S D + YI++ QI V+ TGG DP
Sbjct: 129 --ASLDVAPGVEYIRKNPQINNVLLTGGRLPDP 159
>gi|255011024|ref|ZP_05283150.1| hypothetical protein Bfra3_17927 [Bacteroides fragilis 3_1_12]
gi|313148829|ref|ZP_07811022.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137596|gb|EFR54956.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 699
Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats.
Identities = 65/340 (19%), Positives = 117/340 (34%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ + +L + E + + TP +L+N + ++ I
Sbjct: 203 AIKTPAELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTNGEGYNDEAIRSYI 262
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI ERED + + I RYP+ +L C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + L Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMTYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLRNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEA--------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASAIGMKQFIIQTHFQSPLEVTPQTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + L + YY +
Sbjct: 503 TTR-LRQVLNSLGVVCYYTFSVKGFNENYAVFTPNSRSMQ 541
>gi|255690900|ref|ZP_05414575.1| KamA family protein [Bacteroides finegoldii DSM 17565]
gi|260623540|gb|EEX46411.1| KamA family protein [Bacteroides finegoldii DSM 17565]
Length = 713
Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 117/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISN-HYSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLHRARKKRMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED + + I RYP+ +L C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAEKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + E L Y +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWERKLRRLMTYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+P P RIN EL++ L
Sbjct: 386 QNKTLQHILDAVYRMAVRKQKANLDRPEGEKYAELQRVRLGSRLPAYLPMRINDELVEIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAAGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 TTR-LRQVLNSLGVMCYYTF 524
>gi|253569751|ref|ZP_04847160.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251840132|gb|EES68214.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 717
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 117/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 206 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED + + I RYP+ +L C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + ++ L Y ++ +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN EL+ L
Sbjct: 386 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 TTR-LRQVLNSLGVVCYYTF 524
>gi|167763257|ref|ZP_02435384.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC
43183]
gi|167698551|gb|EDS15130.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC
43183]
Length = 699
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 68/344 (19%), Positives = 115/344 (33%), Gaps = 55/344 (15%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ S +L + E + + TP +L+N +D +
Sbjct: 201 AVKSPTELNRFLGNSLSVETMYLLSRARKKGMPFFATPYYLSLLNCTGSGYNDDSLRSYI 260
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ PQ E I ERED + + I RYP+ +L C
Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320
Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S + + + + L Y +E +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFEELHPKESWDKKLRRLMTYFEEDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L + + +Q +R SR+P P RIN EL+ L
Sbjct: 381 QNKTLRNILDAVYRMAVRKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINDELVDIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA I +L +AG ++ +Q V +
Sbjct: 441 REFKEKASTVGIRQFIIQTHFQTPLEVTPEAEEGIRKLLSAGWLITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L + +L I YY + +
Sbjct: 501 TAR-LRQVLNKLGIICYYTFSVKGFEENNAVFTPNSRSIQEEQE 543
>gi|29349882|ref|NP_813385.1| hypothetical protein BT_4474 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341793|gb|AAO79579.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 720
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 117/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 208 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED + + I RYP+ +L C
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + ++ L Y ++ +Q+ +++ TGGD L+
Sbjct: 328 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 387
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN EL+ L
Sbjct: 388 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 447
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 448 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 508 TTR-LRQVLNSLGVVCYYTF 526
>gi|298384138|ref|ZP_06993699.1| KamA family protein [Bacteroides sp. 1_1_14]
gi|298263742|gb|EFI06605.1| KamA family protein [Bacteroides sp. 1_1_14]
Length = 718
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 117/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 206 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED + + I RYP+ +L C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + ++ L Y ++ +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN EL+ L
Sbjct: 386 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 TTR-LRQVLNSLGVVCYYTF 524
>gi|313158793|gb|EFR58178.1| KamA family protein [Alistipes sp. HGB5]
Length = 698
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 57/355 (16%), Positives = 114/355 (32%), Gaps = 63/355 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ S +L + E + + + TP +L++ ++ I
Sbjct: 202 AVKSPSELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLDVTGKGYGDEAIRSYI 261
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKG--------------IVHRYPDRILLKLLH--- 103
+ ++ + G I RYP+ +L
Sbjct: 262 LYSP---QLVETYGSIRAWEKEDVVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGR 318
Query: 104 VCPVYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDP 154
C C C R S++ ++ + + + Y +E +Q+ +++ TGGD
Sbjct: 319 ACGGLCASCQRMYDFQSERLNFEFESLRPKESWDHKLRRLMTYFEEDTQLRDILITGGDA 378
Query: 155 LILSHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELI 197
L+ +K L +L+ + + +Q +R SR+P P RI+ L+
Sbjct: 379 LMSQNKTLHNILEAVYRMACRKRKANAGRPDGEKYAELQRVRLGSRLPAYLPMRIDDGLV 438
Query: 198 QCLKEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ L+E + I H P E + EA AI R+ AG ++ +Q V +
Sbjct: 439 EVLREFKQKASAVGVRQFIIQTHFQSPLEVTPEAQEAIRRILAAGWLVTNQLVYTVAASR 498
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ--KIVASLKEKIS 302
L + L + YY + + +++
Sbjct: 499 RGHTTR-LRQVLNALGVVCYYTFSVKGFQENYAVFTPNSRSLQEQHEEKIYGRLT 552
>gi|253565968|ref|ZP_04843422.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251945072|gb|EES85510.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 699
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 65/340 (19%), Positives = 115/340 (33%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ + +L + E + + TP +L+N ++ I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI ERED + + I RYP+ +L C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + L Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + L + YY +
Sbjct: 503 TTR-LRQVLNSLGVVCYYTFSVKGFNENYAVFTPNSRSMQ 541
>gi|53714863|ref|YP_100855.1| hypothetical protein BF3578 [Bacteroides fragilis YCH46]
gi|52217728|dbj|BAD50321.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 699
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 65/340 (19%), Positives = 115/340 (33%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ + +L + E + + TP +L+N ++ I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI ERED + + I RYP+ +L C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + L Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + L + YY +
Sbjct: 503 TTR-LRQVLNSLGVVCYYTFSVKGFNENYAVFTPNSRSMQ 541
>gi|301164314|emb|CBW23872.1| conserved hypothetical protein [Bacteroides fragilis 638R]
Length = 699
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 65/340 (19%), Positives = 115/340 (33%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ + +L + E + + TP +L+N ++ I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI ERED + + I RYP+ +L C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + L Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + L + YY +
Sbjct: 503 TTR-LRQVLNSLGVVCYYTFSVKGFNENYAVFTPNSRSMQ 541
>gi|60682845|ref|YP_212989.1| hypothetical protein BF3383 [Bacteroides fragilis NCTC 9343]
gi|60494279|emb|CAH09074.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
Length = 699
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 65/340 (19%), Positives = 115/340 (33%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ + +L + E + + TP +L+N ++ I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI ERED + + I RYP+ +L C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + L Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + L + YY +
Sbjct: 503 TTR-LRQVLNSLGVVCYYTFSVKGFNENYAVFTPNSRSMQ 541
>gi|270293625|ref|ZP_06199827.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270275092|gb|EFA20952.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 698
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 59/347 (17%), Positives = 110/347 (31%), Gaps = 61/347 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ S +L + E + + + TP +L+N ++ +
Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKG--------------IVHRYPDRILLKLLH--- 103
+ ++ + + G I RYP+ +L
Sbjct: 261 LYSP---QLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGR 317
Query: 104 VCPVYCRFCFRREMVGS-----QKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDP 154
C C C R S + T+ + E + Y +E +Q+ +++ TGGD
Sbjct: 318 ACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMDYFEEDTQLRDILITGGDA 377
Query: 155 LILSHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELI 197
L+ +K L +L + + +Q +R SR+P P RIN L+
Sbjct: 378 LMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLV 437
Query: 198 QCLKEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ L+E + I H P E + EA I +L AG ++ +Q V +
Sbjct: 438 EILREFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASR 497
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L + +L + YY + +
Sbjct: 498 RGHTTR-LRQVLNQLGVVCYYTFSVKGFEENNAVFTPNSRSVQEQRE 543
>gi|265766723|ref|ZP_06094552.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253100|gb|EEZ24576.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 699
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 65/340 (19%), Positives = 115/340 (33%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ + +L + E + + TP +L+N ++ I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI ERED + + I RYP+ +L C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + L Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + L + YY +
Sbjct: 503 TTR-LRQVLNSLGVVCYYTFSVKGFNENYAVFTPNSRSMQ 541
>gi|189467675|ref|ZP_03016460.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM
17393]
gi|189435939|gb|EDV04924.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM
17393]
Length = 697
Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 68/340 (20%), Positives = 118/340 (34%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHN---PNDPIARQF 60
S +L + E + + +TP +L+NP + ++ +
Sbjct: 200 AAKSPTELNRFLGNSLSAETMYLLSRARKKGMPFFVTPYYLHLLNPGSTGYNDESLRSYI 259
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ PQ E I ERED + + I RYP+ +L C
Sbjct: 260 LYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 319
Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S + ++ + E L Y +E +Q+ +++ TGGD L+
Sbjct: 320 GLCASCQRMYDFQSKRLNFEFDSLRPKETWEKKLRRLMTYFEEDTQLRDILITGGDALMS 379
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L +L+ + + +Q +R SR+P P RIN EL++ L
Sbjct: 380 QNKTLNTILEAIYRMAARKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINNELVEIL 439
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+ + I H P E + EA I +L +AG ++ +Q V +
Sbjct: 440 RTFKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGIRKLLSAGWLITNQLVYNVAASRRGH 499
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + EL + YY + +
Sbjct: 500 TTR-LRQVLNELGVVCYYTFSVKGFEENNAVFTPNSRSMQ 538
>gi|160888851|ref|ZP_02069854.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492]
gi|156861750|gb|EDO55181.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492]
Length = 698
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 60/347 (17%), Positives = 110/347 (31%), Gaps = 61/347 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ S +L + E + + + TP +L+N ++ +
Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKG--------------IVHRYPDRILLKLLH--- 103
+ ++ + + G I RYP+ +L
Sbjct: 261 LYSP---QLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGR 317
Query: 104 VCPVYCRFCFRREMVGS-----QKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDP 154
C C C R S + T+ + E +AY +E +Q+ +++ TGGD
Sbjct: 318 ACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMAYFEEDTQLRDILITGGDA 377
Query: 155 LILSHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELI 197
L+ +K L +L + + +Q +R SR+P P RIN L+
Sbjct: 378 LMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLV 437
Query: 198 QCLKEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ L+E I H P E + EA I +L AG ++ +Q V +
Sbjct: 438 EILREFKEKASTIGIHQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASR 497
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L + +L + YY + +
Sbjct: 498 RGHTTR-LRQVLNQLGVVCYYTFSVKGFEENNAVFTPNSRSVQEQRE 543
>gi|153809340|ref|ZP_01962008.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185]
gi|149128110|gb|EDM19331.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185]
Length = 712
Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats.
Identities = 68/320 (21%), Positives = 117/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED + + I RYP+ +L C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWILPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + + L Y +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN EL++ L
Sbjct: 386 QNKTLRHILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVEIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 TTR-LRQVLNSLGVVCYYTF 524
>gi|317479408|ref|ZP_07938542.1| KamA family protein [Bacteroides sp. 4_1_36]
gi|316904482|gb|EFV26302.1| KamA family protein [Bacteroides sp. 4_1_36]
Length = 698
Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 60/343 (17%), Positives = 111/343 (32%), Gaps = 61/343 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPIARQF 60
+ S +L + E + + + TP +L+N ++ +
Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKG--------------IVHRYPDRILLKLLH--- 103
+ ++ + + G I RYP+ +L
Sbjct: 261 LYSP---QLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGR 317
Query: 104 VCPVYCRFCFRREMVGS-----QKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDP 154
C C C R S + T+ + E +AY +E +Q+ +++ TGGD
Sbjct: 318 ACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMAYFEEDTQLRDILITGGDA 377
Query: 155 LILSHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELI 197
L+ +K L +L + + +Q +R SR+P P RIN L+
Sbjct: 378 LMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLV 437
Query: 198 QCLKEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ L+E + I H P E + EA I +L AG ++ +Q V +
Sbjct: 438 EILREFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASR 497
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + +L + YY + +
Sbjct: 498 RGHTTR-LRQVLNQLGVVCYYTFSVKGFEENNAVFTPNSRSVQ 539
>gi|224538814|ref|ZP_03679353.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519571|gb|EEF88676.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus
DSM 14838]
Length = 697
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 68/340 (20%), Positives = 118/340 (34%), Gaps = 55/340 (16%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLINPHN---PNDPIARQF 60
S +L + E + + +TP +L+NP + ++ +
Sbjct: 200 AAKSPTELNRFLGNSLSAETMYLLSRARKKGMPFFVTPYYLHLLNPGSTGYNDESLRSYI 259
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ PQ E I ERED + + I RYP+ +L C
Sbjct: 260 LYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 319
Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S + ++ + E L Y +E +Q+ +++ TGGD L+
Sbjct: 320 GLCASCQRMYDFQSKRLNFEFDSLRPKEIWEKKLRRLMTYFEEDTQLRDILITGGDALMS 379
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L +L+ + + +Q +R SR+P P RIN EL++ L
Sbjct: 380 QNKTLNTILEAVYRMAARKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINNELVEIL 439
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+ + I H P E + EA I +L +AG ++ +Q V +
Sbjct: 440 RTFKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGIRKLLSAGWLITNQLVYNVAASRRGH 499
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + EL + YY + +
Sbjct: 500 TTR-LRQVLNELGVVCYYTFSVKGFEENNAVFTPNSRSMQ 538
>gi|299148849|ref|ZP_07041911.1| KamA family protein [Bacteroides sp. 3_1_23]
gi|298513610|gb|EFI37497.1| KamA family protein [Bacteroides sp. 3_1_23]
Length = 713
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 115/320 (35%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 208 AIKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED + + I RYP+ +L C
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 508 TTR-LRQVLNSLGVVCYYTF 526
>gi|332975101|gb|EGK12006.1| protein of hypothetical function DUF160 [Desmospora sp. 8437]
Length = 187
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 193 NPELIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ EL+ L E +++ H NHP E +++A AI L AG+IL++Q+ +LKGIND
Sbjct: 6 DKELLDTLSEYSLGDSRIHVMAHFNHPRELTDQAYRAIDALQRAGVILVNQTPVLKGIND 65
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-F 308
DPEILA L+ + PYY AG + F LT E +++ K + SGL +
Sbjct: 66 DPEILAELLDKLSWAGVTPYYFFQNRPVAGNADFVLTFREAYEVIEQAKARTSGLGKRIR 125
Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
Y + GK++I V + H D+
Sbjct: 126 YA--MSHSTGKIEI-----LAVEGNKIYLKYHQARNPDF 157
>gi|295087042|emb|CBK68565.1| L-lysine 2,3-aminomutase [Bacteroides xylanisolvens XB1A]
Length = 713
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 114/320 (35%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265
Query: 61 I--PQKEEL--NILPEERED------PIGDNNHSPL-KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED P P I RYP+ +L C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + L Y +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQHILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 TTR-LRQVLNSLGVVCYYTF 524
>gi|160887264|ref|ZP_02068267.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483]
gi|156107675|gb|EDO09420.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483]
Length = 711
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 115/320 (35%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED + + I RYP+ +L C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 TTR-LRQVLNSLGVVCYYTF 524
>gi|260171420|ref|ZP_05757832.1| hypothetical protein BacD2_06100 [Bacteroides sp. D2]
Length = 711
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 115/320 (35%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED + + I RYP+ +L C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 TTR-LRQVLNSLGVVCYYTF 524
>gi|315919734|ref|ZP_07915974.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313693609|gb|EFS30444.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 713
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 115/320 (35%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 208 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED + + I RYP+ +L C
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 508 TTR-LRQVLNSLGVVCYYTF 526
>gi|293369159|ref|ZP_06615753.1| KamA family protein [Bacteroides ovatus SD CMC 3f]
gi|292635742|gb|EFF54240.1| KamA family protein [Bacteroides ovatus SD CMC 3f]
Length = 711
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 115/320 (35%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED + + I RYP+ +L C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 TTR-LRQVLNSLGVVCYYTF 524
>gi|237721600|ref|ZP_04552081.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229449396|gb|EEO55187.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 713
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 115/320 (35%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 208 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267
Query: 61 I--PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED + + I RYP+ +L C
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 508 TTR-LRQVLNSLGVVCYYTF 526
>gi|237715748|ref|ZP_04546229.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262408756|ref|ZP_06085302.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644787|ref|ZP_06722531.1| KamA family protein [Bacteroides ovatus SD CC 2a]
gi|294806062|ref|ZP_06764919.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b]
gi|229444457|gb|EEO50248.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262353621|gb|EEZ02715.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639865|gb|EFF58139.1| KamA family protein [Bacteroides ovatus SD CC 2a]
gi|294446730|gb|EFG15340.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 712
Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 114/320 (35%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265
Query: 61 I--PQKEEL--NILPEERED------PIGDNNHSPL-KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED P P I RYP+ +L C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + L Y +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 TTR-LRQVLNSLGVVCYYTF 524
>gi|298484432|ref|ZP_07002588.1| KamA family protein [Bacteroides sp. D22]
gi|298269405|gb|EFI11010.1| KamA family protein [Bacteroides sp. D22]
Length = 713
Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 114/320 (35%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNANL--IKKEQIDEIKEISNH-YSIALTPVIANLIN---PHNPNDPIARQF 60
+ S +L + E + + TP +L+N ++ I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265
Query: 61 I--PQKEEL--NILPEERED------PIGDNNHSPL-KGIVHRYPDRILLKLLH---VCP 106
+ P+ E NI E+ED P P I RYP+ +L C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + L Y +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 TTR-LRQVLNSLGVVCYYTF 524
>gi|289665699|ref|ZP_06487280.1| Putative radical SAM superfamily protein [Xanthomonas campestris
pv. vasculorum NCPPB702]
Length = 123
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 65/123 (52%)
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+++ PV +HANH EF AA+ L +AG LL+Q+VLL+G+ND + LA L
Sbjct: 1 MRQLPWPVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDALAALSE 60
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ PYYLH D AG +HF + + + L ++SG P + ++PG GK
Sbjct: 61 RSFAAGVLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIPGDTGK 120
Query: 320 VKI 322
+
Sbjct: 121 RPL 123
>gi|226327320|ref|ZP_03802838.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198]
gi|225204538|gb|EEG86892.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198]
Length = 153
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 6 KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ ++ +L ++ E++ + + + + + + +PNDP+ Q +
Sbjct: 21 QAISDPVELLQLLALEHHEELQKGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAN 80
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E I P DP+ + + + G++H+Y +R LL + C V CR+CFRR
Sbjct: 81 AEFTITPGFSTDPLDEQQ-NAVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYEDNKG 139
Query: 125 VLSSKDTEAALAYIQE 140
+ + + A+ YI++
Sbjct: 140 --NKANWQKAIEYIKK 153
>gi|213024108|ref|ZP_03338555.1| hypothetical protein Salmonelentericaenterica_16976 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 105
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 62/104 (59%)
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDPL+ L +L L IKHV+ LR HSR+PIV P RI EL+ ++ + +
Sbjct: 1 GDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVN 60
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
H NH E E A+ +L + G+ LL+QSVLL+G+ND+ + LA
Sbjct: 61 HINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLA 104
>gi|167944999|ref|ZP_02532073.1| KamA family protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 107
Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 52/106 (49%)
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E S + +L+ GI LL+QSVLL+G+ND E LA L + + PYYLH D
Sbjct: 1 REISAAVADGLQQLSEQGIRLLNQSVLLRGVNDSAETLAELSEQLFDAGVMPYYLHLLDR 60
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
G +HF L + Q+I +L + G P + + G K +
Sbjct: 61 VDGAAHFELPAAKSQQIYQALLAALPGYLVPKLVREEVGAPSKTPV 106
>gi|10198121|gb|AAG15195.1|AF286047_3 unknown [Chlorobaculum tepidum]
Length = 276
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 37/170 (21%)
Query: 33 NHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEELNILPEER---------------- 74
Y + +A NLI+ N P+DP+ R PQ L+
Sbjct: 46 EVYPFRVNSHVAENLIDWSNIPDDPMFRLTFPQAGMLSADDYTMLSGLVASNADPSIIRE 105
Query: 75 ----------EDPIGDN-------NHSPLKGIVHRYPDRILLKL--LHVCPVYCRFCFRR 115
+P G + P G+ H+Y + +L VC YC +CFR
Sbjct: 106 EARKIQLRQNPNPAGQMELNTPWLDDEPFHGMQHKYRESVLFFPLEAQVCHAYCTYCFRW 165
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
+ ++ E + Y+++ ++ +VIFTGGDP+++S ++K+
Sbjct: 166 PQFSGVENLKFANDSIERLVEYLEQHPEVKDVIFTGGDPMVMSTMLIKKI 215
>gi|58426923|gb|AAW75960.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 237
Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 2/132 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + L + + + + + + + + +DP+ RQ +
Sbjct: 24 QQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ +P D +GD G++ +Y R LL C V+CR+CFRR ++
Sbjct: 84 PLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEA 133
+ +
Sbjct: 144 E--TAARDGWRE 153
>gi|270669603|ref|ZP_06222610.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212]
gi|270316555|gb|EFA28395.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212]
Length = 105
Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A+ +L + LL+QSVLL+ +NDD +IL L + I PYYLH D G SHF
Sbjct: 6 NAMQKLNAVNVTLLNQSVLLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFL 65
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
++ E +I +L+ SG P ++ G K
Sbjct: 66 ISDIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 101
>gi|325918736|ref|ZP_08180828.1| hypothetical protein XVE_4859 [Xanthomonas vesicatoria ATCC 35937]
gi|325535030|gb|EGD06934.1| hypothetical protein XVE_4859 [Xanthomonas vesicatoria ATCC 35937]
Length = 130
Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 40/107 (37%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + + L + + E + + + + + + +DP+ RQ +
Sbjct: 24 QQWRDAVRDPRVLLELLGLDAQAAGISAEAAAQFPLRVPQAFVARMRHGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
P E+ +P D +GD G++ +Y R LL C V+
Sbjct: 84 PLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVH 130
>gi|169626132|ref|XP_001806468.1| hypothetical protein SNOG_16345 [Phaeosphaeria nodorum SN15]
gi|111055211|gb|EAT76331.1| hypothetical protein SNOG_16345 [Phaeosphaeria nodorum SN15]
Length = 243
Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
I L G+ + + + LL G+ + + L+ + I PY++ + G +
Sbjct: 77 IDHLFQHGVTVPNLTRLLSGVEEQASDMRELINKLSGIHIVPYHVCLHEACEG-EDLCVP 135
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ ++ ++ I P + DLP G GK
Sbjct: 136 LSVALQLEKEIRGPILDYQMPKLVADLPNGGGK 168
>gi|213859667|ref|ZP_03385371.1| hypothetical protein SentesT_25317 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 81
Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
++E I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 1 SQDEFVIAPGFSTDPL-EEQHSVVSGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAEN 59
Query: 123 GTVLSSKDTEAALAYIQEKSQIWE 146
+ ++ + AL Y+ ++ E
Sbjct: 60 QG--NKRNWQTALEYVAAHPELDE 81
>gi|167947613|ref|ZP_02534687.1| hypothetical protein Epers_14147 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 119
Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 4/119 (3%)
Query: 7 TLTSAQDLYNANLIKKEQID-EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
T Q L+ + + + + + + A L+ +P DP+ RQ +P +
Sbjct: 4 AFTHPQALFEFLQLDPGPAAWRALQAATTFPLRVPLGYAALMRKGDPADPLLRQVLPLAQ 63
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL +P+G S +G + + C F R T
Sbjct: 64 ELQDQAGFDTNPVG---DSAGRGTARSAAEVPGTSAIDRHWRLCPFNCPRYWPSPPGPT 119
>gi|154308719|ref|XP_001553695.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10]
gi|150852733|gb|EDN27925.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10]
Length = 309
Score = 76.9 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 22 KEQIDEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDP 77
++ I+++KE +++ P + ++I+ NP DPI RQFIP K +L P+ D
Sbjct: 216 EDFIEDVKEGIKLAPMSIRLPPHVLSIIDWENPFEDPIRRQFIPMKSSKLEDHPKVELDS 275
Query: 78 IGDNNHSPLKGIVHRYPDRILLK 100
+ +++ SP++G VHRY D+ L
Sbjct: 276 LHESDDSPVEGFVHRYYDKALFL 298
>gi|163784746|ref|ZP_02179552.1| Lysine 2,3-aminomutase [Hydrogenivirga sp. 128-5-R1-1]
gi|159879987|gb|EDP73685.1| Lysine 2,3-aminomutase [Hydrogenivirga sp. 128-5-R1-1]
Length = 115
Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ LT+ +++ + KE + + + TP +LI + ++PI +Q
Sbjct: 29 QIANR-LTTLEEIKKIFPVSKELETAFLKTTEIFHFGTTPYYLSLIKEFSYDNPIFKQVF 87
Query: 62 PQKEELN--ILPEEREDPIGDNNHSP 85
P +E++ EDP ++ SP
Sbjct: 88 PSLDEIDKEKQKYSYEDPFLEDTLSP 113
>gi|88800258|ref|ZP_01115825.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297]
gi|88776973|gb|EAR08181.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297]
Length = 322
Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 88/248 (35%), Gaps = 41/248 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C G LS+ + EAA+ + ++ TGG+P + S
Sbjct: 17 VTDVCNFRCSYCLPDGYQGKPDEAFLSASELEAAVRGFAQM-GTQKIRLTGGEPGLRSD- 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY--- 217
L +++ L I + + + PQRI + NH
Sbjct: 75 -LPEIIYRLNRIDGINNIAVTTNG-YKLPQRI-------------QHWADAGLNHLNVSI 119
Query: 218 ---------EFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
E + E + +++ G+ + +VL+KG+NDD LA ++ +
Sbjct: 120 DSLDSSTFHEITGHDRLAEVLEGLAKARELGLTVKVNAVLMKGVNDD---LAAVLTWLKQ 176
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ ++ + + FR G I SL + G QP D+ G +
Sbjct: 177 TPVTLRFIEVMETSDQAVFFRQYHVRGDDIRQSLLSQ--GW-QPVL-RDVAAGPAQEFWH 232
Query: 324 THNIKKVG 331
++G
Sbjct: 233 PDYAGRIG 240
>gi|227357433|ref|ZP_03841787.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
gi|227162391|gb|EEI47391.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
Length = 63
Score = 70.7 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
PYYLH D G +HF + E ++I+ SL +SG P ++ G K +D
Sbjct: 1 MPYYLHVLDKVQGAAHFMVPDSEAREIMKSLMSLVSGYMVPKLTREIGGEPSKTLLD 57
>gi|163785257|ref|ZP_02179923.1| lysine 2,3-aminomutase related protein [Hydrogenivirga sp.
128-5-R1-1]
gi|159879475|gb|EDP73313.1| lysine 2,3-aminomutase related protein [Hydrogenivirga sp.
128-5-R1-1]
Length = 105
Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 1 MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIA 57
M+ + T S +D+ + ++QI +I+ +S + + + LIN NP DPI
Sbjct: 1 MRYKTYTAKSFKDIPQVKKYLTEQQIFDIEVVSRVFPFKVNNYVIEKLINWGNPLEDPIF 60
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLK 87
R PQ+ L + + N + K
Sbjct: 61 RLTFPQRGMLQDEDYYKIAKLMKNGENEEK 90
>gi|213418029|ref|ZP_03351106.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 67
Score = 69.2 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101
+ NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL +
Sbjct: 9 FIARMEKGNPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLV 66
>gi|229004622|ref|ZP_04162360.1| Lysine 2,3-aminomutase protein [Bacillus mycoides Rock1-4]
gi|228756663|gb|EEM05970.1| Lysine 2,3-aminomutase protein [Bacillus mycoides Rock1-4]
Length = 177
Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 34/136 (25%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQ 63
T ++ +++ N I + EI+ I + + NLI+ N PNDP+ + P
Sbjct: 14 YTTSNFKNIPQLNEISPHLMKEIEVIGSVLPFKVNSYYLNNLIDWGNVPNDPMFQLVFPN 73
Query: 64 KEELNILPE-------------------------EREDPIGDN-------NHSPLKGIVH 91
++ + P G + LKGI H
Sbjct: 74 RKMIEEEDYIKLESSIDTGDKALKKELVENIIKKLNPHPGGQMELNVPIVEENALKGIQH 133
Query: 92 RYPDRILLKLLHVCPV 107
+Y + +L V PV
Sbjct: 134 KYNETVLFFQKKVKPV 149
>gi|15607116|ref|NP_214498.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5]
gi|7674126|sp|O67929|MOAA_AQUAE RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|2984358|gb|AAC07877.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5]
Length = 320
Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 99/227 (43%), Gaps = 25/227 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L C + C FC + K +L+ ++ E + I K + +V TGG+PL+
Sbjct: 17 LTDRCNLRCNFCMPPGKEYNFLPKRQLLTPEEIEEYVK-IFAKLGVEKVRLTGGEPLLRE 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP- 216
L+++++ + ++ ++ + + + +R ++ LKEAG K + +++H+ +P
Sbjct: 76 D--LEEIIQRISKVEGIKDIALTTNG-VFLKER-----LKALKEAGLKRITVSVHSLNPE 127
Query: 217 -------YEFS-EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ E I R G + SV++KG NDD + +L R F L +
Sbjct: 128 KNQKLVNRSVNLGEVFEVIIRAKELGFKVKVNSVIIKGFNDD--EILDLARFFKNLGVTL 185
Query: 269 YYLHHPDLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILDLP 314
++ + D + + + + +I+ +K++ + P D
Sbjct: 186 RFIEYMD-VGTVNDWDFSKVVSADEILNLMKKEFTFYPLPKRPEDTS 231
>gi|315425435|dbj|BAJ47099.1| molybdenum cofactor biosynthesis protein A [Candidatus
Caldiarchaeum subterraneum]
Length = 347
Score = 63.8 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 89/251 (35%), Gaps = 33/251 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C FC V +L+ ++ + + + +V +GG+PL+
Sbjct: 35 VTDRCNFRCDFCMPLHPVWIPHKEILTYEEMARVIRILVGM-NVTKVRLSGGEPLMRRD- 92
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPYEF 219
L+K +K + I V+ + + E LKEAG V +++H+ P F
Sbjct: 93 -LEKGVKLISSIPGVETISMTTNGY------FLEEKAAQLKEAGLQSVTVSLHSLKPERF 145
Query: 220 SEEA------IAAISRLANA---GI-ILLSQSVLLKGINDDPEI-LANL-MRTFVELRIK 267
+ + L A G+ + V+ +G NDD + L ++ +R
Sbjct: 146 EKIVGRKDVFSKVLDGLREAKKVGLQPIKINCVVTRGCNDDEILDFVELGRQSGFSIRFI 205
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
Y S + G +I+ ++EK GL ++LP G +
Sbjct: 206 EYMPFDGRHLWDVSRL-VP---GMEIIEKIREKY-GL------VELPREPGSTAVVYEFA 254
Query: 328 KKVGNGSYCIT 338
IT
Sbjct: 255 DGADGNVAVIT 265
>gi|94263035|ref|ZP_01286854.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
proteobacterium MLMS-1]
gi|93456578|gb|EAT06686.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
proteobacterium MLMS-1]
Length = 338
Score = 61.1 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 79/213 (37%), Gaps = 25/213 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C + + +LS ++ E + + I +V TGG+PL+
Sbjct: 29 VTDRCNLNCRYCRPKGPCEEPRRELLSYEELERLVRLLVAM-GISKVRLTGGEPLVR--H 85
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+ + LR I ++ L + + ++ ++ L+ +G + + + +
Sbjct: 86 GMIAFMGRLRAIAGLEQLALTTNA-TLLASHLDD--LRQLRLSGLNISLDT-LSAARFAT 141
Query: 221 EEAIAAISRLAN-------AGIILLSQSVLLKGINDDPEI----LANLMRTFVE------ 263
R+ GI L +V+ +GIN D + LA V
Sbjct: 142 ITGQDLFGRVFKVIEAALATGIPLKINAVVQEGINTDELLDLARLAEKWPLEVRYIEPMP 201
Query: 264 -LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
+ DLA +HF+ + E +IV
Sbjct: 202 FAGRDEFSAGQWDLARLRAHFQANLPELTEIVR 234
>gi|94269536|ref|ZP_01291489.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
proteobacterium MLMS-1]
gi|93451185|gb|EAT02100.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
proteobacterium MLMS-1]
Length = 338
Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 79/213 (37%), Gaps = 25/213 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C + + +LS ++ E + + I +V TGG+PL+
Sbjct: 29 VTDRCNLNCRYCRPKGPCEEPRRELLSYEELERLVRLLVAM-GISKVRLTGGEPLVR--H 85
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+ + LR I ++ L + + ++ ++ L+ +G + + + +
Sbjct: 86 GMIAFMGRLRAIAGLEQLALTTNA-TLLASHLDD--LRQLRLSGLNISLDT-LSAARFAT 141
Query: 221 EEAIAAISRLA-------NAGIILLSQSVLLKGINDDPEI----LANLMRTFVE------ 263
R+ GI L +V+ +GIN D + LA V
Sbjct: 142 ITGQDLFGRVFTVIEAALATGIPLKINAVVQEGINTDELLDLARLAEKWPLEVRFIEPMP 201
Query: 264 -LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
+ DLA +HF+ + E +IV
Sbjct: 202 FAGRDEFSAGQWDLARLRAHFQANLPELTEIVR 234
>gi|229917634|ref|YP_002886280.1| molybdenum cofactor biosynthesis protein A [Exiguobacterium sp.
AT1b]
gi|229469063|gb|ACQ70835.1| molybdenum cofactor biosynthesis protein A [Exiguobacterium sp.
AT1b]
Length = 335
Score = 59.9 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/244 (17%), Positives = 88/244 (36%), Gaps = 21/244 (8%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFR----REMVGSQKGTVLSSKDTEAALAYIQ 139
+P R + + + ++ C CR+C R ++ +LS + E + I
Sbjct: 2 TPWTDRRRRPLEDLRISVIDKCNFRCRYCMPEEAFRHHQFLKRDELLSFDEIERFVRIIA 61
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS------RVPIVDPQRIN 193
+ +V TGG+PL+ + L ++++ LR + ++ + + R+ V Q
Sbjct: 62 PH-GVKKVRLTGGEPLLRPN--LDELIRRLRAVTTIETIGLTTNGVYLERMAKVLKQAGL 118
Query: 194 PELIQCLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+ L + + + E + I G+ + V+ KG ND
Sbjct: 119 DRVNVSLDALSAETFGMMNGRGTSPE---TVLRGIDEAKRQGLEVKVNMVVRKGWNDHEV 175
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
E I Y+ D+ + + I+ LK++ +GL +P +
Sbjct: 176 APMAAYFK--ERNITLRYIEFMDVGTANEWNVEHVVSSESILEVLKQR-NGLLEP-LAPE 231
Query: 313 LPGG 316
G
Sbjct: 232 TLGE 235
>gi|262189696|ref|ZP_06048065.1| lysine 2,3-aminomutase [Vibrio cholerae CT 5369-93]
gi|262034425|gb|EEY52796.1| lysine 2,3-aminomutase [Vibrio cholerae CT 5369-93]
Length = 51
Score = 59.9 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
G +HF ++ ++ ++I+A L E++SG P ++ G K +D
Sbjct: 1 MQGAAHFYVSDDKARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLD 47
>gi|94985862|ref|YP_605226.1| molybdenum cofactor biosynthesis protein A [Deinococcus
geothermalis DSM 11300]
gi|94556143|gb|ABF46057.1| Molybdenum cofactor biosynthesis protein A [Deinococcus
geothermalis DSM 11300]
Length = 333
Score = 59.1 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 43/209 (20%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C + C +C E+ G + +L+ ++ E + ++ TGG+PL
Sbjct: 17 VTDRCNLRCTYCMPAEVFGPDYAFLPRTELLTFEEIERLARAF-VDLGVRKLRLTGGEPL 75
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L +++ L I V+ + + ++ P L L+ AG
Sbjct: 76 LRRD--LPELVARLGRIAGVEDIALTTNGLLL------PRLAADLQRAGLKRVTV----S 123
Query: 216 PYEFSEEAIAAISRL--------------ANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E ++ L AG+ + +V+ +G+ND+ L L
Sbjct: 124 LDSLDPEVFGRMNGLNVHPQRVLDGIEAALQAGLSVKVNTVVQRGVNDEG--LRELWLAL 181
Query: 262 VE---------LRIKPYYLHHPDLAAGTS 281
E + + + + D +
Sbjct: 182 REQAVVRFIEFMDVGNHNGWNLDAVVPSR 210
>gi|289671287|ref|ZP_06492362.1| hypothetical protein XcampmN_23115 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 78
Score = 59.1 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 23/68 (33%)
Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68
+ L + + + + + + + + +DP+ RQ +P E+
Sbjct: 2 RDPRVLLEQLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVLPLDAEMQ 61
Query: 69 ILPEERED 76
+P D
Sbjct: 62 PVPGFGLD 69
>gi|218780597|ref|YP_002431915.1| molybdenum cofactor biosynthesis protein A [Desulfatibacillum
alkenivorans AK-01]
gi|218761981|gb|ACL04447.1| molybdenum cofactor biosynthesis protein A [Desulfatibacillum
alkenivorans AK-01]
Length = 315
Score = 58.4 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 76/212 (35%), Gaps = 19/212 (8%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E + VLS ++ A + I +V TGG+PL+
Sbjct: 1 MSVTDRCNLRCFYCVPEEGLPFLGHKDVLSYEEITAIVQAGVRH-GIQKVRITGGEPLVR 59
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRV-----PIVDPQRINPELIQCLKEAGKPVYI--A 210
K +++++ ++ + ++ L + D ++ + ++ KP
Sbjct: 60 --KGIEELVASISALPEIKDLAMTTNGVRLASMAHDLKKAGLHRVNVSLDSMKPEVFEKI 117
Query: 211 IHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD--PEILANLMRTFVELRIK 267
NH E I +AG+ + V + G+ND + M V +R
Sbjct: 118 TGRNHCQE----VKEGIEAALDAGLTPVKINVVAVAGVNDSEFADFAKLTMDKPVSVR-F 172
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Y+ ++ E ++I+
Sbjct: 173 IEYMPIGKNMHWAEDRSISSREIREIIEKQLG 204
>gi|157694065|ref|YP_001488527.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus
SAFR-032]
gi|157682823|gb|ABV63967.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus
SAFR-032]
Length = 335
Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 31/179 (17%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIW 145
HR + + + C C +C E+ G K +LS ++ E + +
Sbjct: 9 HRPLRDLRISVTDRCNFRCTYCMPAEIFGPDYPFLNKEELLSFEEIEQLATLFAKDLGVV 68
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++ TGG+PL+ L +++ L I ++ + + ++ P LK+AG
Sbjct: 69 KIRITGGEPLLRKD--LPILIEKLSNIPGIEDIAMTTNGTLL------PVYADKLKKAGL 120
Query: 206 PVYIAIHANHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDD 250
+ + I AG+ + V+ KG+ND
Sbjct: 121 QRVTI----SLDSLNPDRFKQMNGRNISIQKVFDGIEAAKKAGLAIKINMVVQKGVNDQ 175
>gi|299537483|ref|ZP_07050777.1| molybdenum cofactor biosynthesis protein A [Lysinibacillus
fusiformis ZC1]
gi|298727044|gb|EFI67625.1| molybdenum cofactor biosynthesis protein A [Lysinibacillus
fusiformis ZC1]
Length = 338
Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 89/268 (33%), Gaps = 52/268 (19%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQI 144
+HR + + + C CR+C E+ G +LS + E + I +
Sbjct: 8 LHRPLRDLRISVTDRCNFRCRYCMPAEVFGPDYAFLPSDKILSFDEIERLVK-IFVSLGV 66
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
++ TGG+PL+ L +++ + IK V+ + + LK+
Sbjct: 67 KKIRITGGEPLLRRD--LPELIARIHRIKGVEDIALTTNGS-------------LLKKYA 111
Query: 205 KPVY---IAIHANHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGI 247
+P+ +A + +E + I + A AG+ + V+ KG
Sbjct: 112 QPLAQAGLARVSVSLDSLDDERFFEMNGYRGKVLPVLEGIEKAAEAGLQVKINMVVQKGK 171
Query: 248 NDDPEILANLM--RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG-QKIVASLKEKISGL 304
N+ + LR Y ++ +RL ++I+ + +
Sbjct: 172 NEQDIVTMAQFFKEKQHILRFIEY-----MDVGNSNGWRLDDVVSKKEIIEQIHQFTP-- 224
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGN 332
QP P G+V G
Sbjct: 225 LQPV----APNYKGEVATRYQYQDAQGE 248
>gi|117928855|ref|YP_873406.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B]
gi|166217236|sp|A0LVG0|MOAA_ACIC1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|117649318|gb|ABK53420.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B]
Length = 362
Score = 56.1 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 85/267 (31%), Gaps = 62/267 (23%)
Query: 101 LLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGGDP 154
+ C + CR+C RE+ G + +L+ ++ A A+I+ + ++ TGG+P
Sbjct: 20 VTDRCNMRCRYCMPREIFGPNFTFLPRSELLTFEEITRIAAAFIRA--GVRKIRLTGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPEL-------I 197
L+ + L +++ L + V L + ++ R+ L
Sbjct: 78 LLRAD--LPRLVAMLADLPDVHDLALTTNGSLLARYARPLRDAGLRRVTVSLDTLNPATF 135
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILAN 256
L + P+ + +A I +AG + +V+ +G+ND
Sbjct: 136 SRLADTDIPL-------------DNVLAGIDAAQSAGFFPIKLNAVIRRGVNDGDVEELA 182
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
+ ++ + D+ + +I+A + +D
Sbjct: 183 AFAR--DNGHIMRFIEYMDVGNSNGWRAADVVPAAEIIARISSHWP--------ID---- 228
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNI 343
+ +V N
Sbjct: 229 ----PLPPRYPGEVAN---RFRYRDGR 248
>gi|296129601|ref|YP_003636851.1| molybdenum cofactor biosynthesis protein A [Cellulomonas flavigena
DSM 20109]
gi|296021416|gb|ADG74652.1| molybdenum cofactor biosynthesis protein A [Cellulomonas flavigena
DSM 20109]
Length = 349
Score = 56.1 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 50/229 (21%), Positives = 87/229 (37%), Gaps = 26/229 (11%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G+V RY + L C + C +C E + + TVL+ + + E
Sbjct: 16 GLVDRYGRVATDLRVSLTDRCNLRCTYCMPAEGLPWAPDDTVLTDAEVVRLVRIGVEHLG 75
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLK 201
I EV FTGG+PL L++ L+++ H H R + + + L
Sbjct: 76 IREVRFTGGEPL------LRRGLESIVAGTHALRTADGAHVRTSLTTNGLGLDKRARSLA 129
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLAN--AG---------IILLSQSVLLKGINDD 250
EAG + + + I RLA+ AG + +VL++G+NDD
Sbjct: 130 EAGLD-RVNVSLDSLDPVRFATITRRDRLADVLAGLAAASATGLAPVKVNAVLVRGVNDD 188
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
+ L+R + ++ L S R + ++I+ +L
Sbjct: 189 EAV--PLLRWSLTHGYHLRFIEQMPLGPHGSWKRDDLVTAREILDALAA 235
>gi|147678958|ref|YP_001213173.1| molybdenum cofactor biosynthesis enzyme [Pelotomaculum
thermopropionicum SI]
gi|189028691|sp|A5CYZ0|MOAA_PELTS RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|146275055|dbj|BAF60804.1| molybdenum cofactor biosynthesis enzyme [Pelotomaculum
thermopropionicum SI]
Length = 325
Score = 55.7 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 87/233 (37%), Gaps = 34/233 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E V S G +L ++ E + + + ++ TGG+PL+
Sbjct: 16 VTDRCNLRCVYCMPEEGVRSLPHGEILRLEEIETVVR-AAALTGVKKIRLTGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----HANH 215
K L+++++ + I + + + ++ P + LKEAG A+
Sbjct: 73 KGLEELVRRVSGIPGIDDIALTTNGLLL------PSRAKALKEAGVKRVNVSLDTLRADR 126
Query: 216 PYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
E + A I +AG+ + +V+++G N+D + + R
Sbjct: 127 YAEITRGGNLAGAWEGIQSALDAGLHPVKLNTVIIRGFNEDEVVAMAM---LTINRPLHV 183
Query: 270 YLHHPDLAAGTSHF----RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
+S + + +++ ++ K+ G P P G G
Sbjct: 184 RFIELMPIGSSSSWAAGRYVP---AAEVMDAISAKL-GPLVPAR---QPAGGG 229
>gi|297570341|ref|YP_003691685.1| molybdenum cofactor biosynthesis protein A [Desulfurivibrio
alkaliphilus AHT2]
gi|296926256|gb|ADH87066.1| molybdenum cofactor biosynthesis protein A [Desulfurivibrio
alkaliphilus AHT2]
Length = 368
Score = 55.7 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 17/194 (8%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+E+ P +P+ + + G + Y + L + C + CR+C + +
Sbjct: 24 TGDEILTQPLAPVEPV--SGLTDNHGRMVNY---VRLAVTDRCNLNCRYCRPKGPCNEPR 78
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+LS ++ E + I +V TGG+PL+ + L+ LR IK +Q L +
Sbjct: 79 RELLSYEELERICRLLVAM-GISKVRVTGGEPLVR--HGMLGFLRQLRDIKGLQQLALTT 135
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAI------HANHPYEFSEEAIAAISRLANAGII 236
++ P EL + L+ +G + + A + A I AG+
Sbjct: 136 NATLLAPHL--SEL-RQLRLSGLNISLDTLQPERFAAITGQDLFARVFAVIEAAVAAGMP 192
Query: 237 LLSQSVLLKGINDD 250
+ +V+ +GIN D
Sbjct: 193 VKINAVVQEGINTD 206
>gi|323701819|ref|ZP_08113489.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323533123|gb|EGB22992.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 330
Score = 55.7 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 78/216 (36%), Gaps = 40/216 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R V +++ L++++ + + I E + +IF+GG+PL+
Sbjct: 3 VSWNTTNACNLYCAHCYRDAGVKAEEE--LNTEEGKRLIDQIAE-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKP-----VYI 209
+ L + LR F + + I PE+ + LK+ G +
Sbjct: 60 RPD------IFELVAYAKSKGLRPVFGTNGTL-----ITPEVAKRLKDCGAAGMGISLDS 108
Query: 210 AIHANH----PYE-FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
H E + A+ + AG+ + ++ D+ E L +L V
Sbjct: 109 VDPVKHDKFRAQEGCWQAAVEGMRNCRQAGLPFQIHTTVVDWNYDEVEALTDLA---VRE 165
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
+++ F + I L+
Sbjct: 166 GAVAHHVF----------FLVPTGRAVNIEQESLRA 191
>gi|56410451|ref|YP_145825.1| molybdopterin cofactor biosynthesis protein [Geobacillus
kaustophilus HTA426]
gi|56378348|dbj|BAD74257.1| molybdopterin cofactor biosynthesis protein (moaA/nifB/pqqE family)
[Geobacillus kaustophilus HTA426]
Length = 341
Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 76/206 (36%), Gaps = 14/206 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G +G +L+ ++ A LA + + ++ TGG+PL
Sbjct: 24 VTDQCNFRCVYCMPAEVFGPNFRFLDEGQLLTVEEM-ALLAECFVELGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP--IVDPQRINPELIQCLKEAGKPV--YIAI 211
+ L +++ L I ++ + + + +R+ ++ + + + I
Sbjct: 83 LRRD--LDALIERLSAIPGLRDIGLTTNGVHLVKWSKRLKAAGLKRVNVSLDALDDDIFR 140
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
N + + I AG+ + V+ KG ND + +L I ++
Sbjct: 141 KMNGIGVGAAPVLKGIEAALAAGLGVKVNMVVKKGWNDSQIVPMAAYFK--DLGIPLRFI 198
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASL 297
D+ + ++I +
Sbjct: 199 EFMDVGTTNGWDYSHVVTKKEIYEQI 224
>gi|169831502|ref|YP_001717484.1| radical SAM domain-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638346|gb|ACA59852.1| Radical SAM domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 334
Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 90/281 (32%), Gaps = 48/281 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ ++C + C C+R G + LS+ + +A + I + +IF+GG+PL+
Sbjct: 3 VSWNTTNMCNLACAHCYRDA--GQKAEDELSTAEGKALIDEIAG-AGFKIMIFSGGEPLM 59
Query: 157 LSH--KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
+ LR + S + I PE+ L +AG
Sbjct: 60 RPDIYDLIAYAASRGLRPV-------LGSNGTL-----ITPEVAGRLVQAGARAIGISLD 107
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+ A+ + AG+ + ++ ++ E L +L VE
Sbjct: 108 SVDPGAHDGFRAEKGSWQAAVEGMKNCRAAGLPFQVHTTVMDWNEEEVEGLTDLA---VE 164
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI------SGLCQ-----PFYILD 312
L +++ T ++ L ++ +GL P +I
Sbjct: 165 LGGIAHHVFFLVPTGRALAIEHTTLRARQ-YEQLLRRLLKKQQTAGLEVKPTCAPQFIRV 223
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV--HDYPPKS 351
K + + + YC+ + + Y K+
Sbjct: 224 ADQLGAKTRFTRGCLAGIA---YCLVNPVGDLQACAYLDKA 261
>gi|328766119|gb|EGF76180.1| hypothetical protein BATDEDRAFT_28746 [Batrachochytrium dendrobatidis
JAM81]
Length = 1450
Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/299 (16%), Positives = 108/299 (36%), Gaps = 39/299 (13%)
Query: 46 LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVC 105
LI+ P D +A Q ++L I N ++ I+ + + ++ C
Sbjct: 1085 LISKSAPTD-LALQ---LADDLGITAIGFARGNRLNIYTHPYRII---EANLRISVIDRC 1137
Query: 106 PVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
C +C +E+ G K +LS ++ E E I ++ TGG+PL+
Sbjct: 1138 NFRCTYCMPKEIFGRDFVFMPKDQLLSFEEIERLAKNFVE-LGIRKIRLTGGEPLLRRD- 1195
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIV--DPQRINPELIQCLKEAGKPV--YIAIHANHP 216
L +++ L +K ++ + + ++ ++ + + + + I N
Sbjct: 1196 -LPILIERLTRMKDLEDIALTTNGSLLGALASKLKDAGLDRINVSLDALDDAIFKKINDS 1254
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + I + G+ + V+ KG+ND + E I Y+ D
Sbjct: 1255 GVGPERILRGIKKAHAVGLEVKVNMVVKKGMNDSQIVPMANYFK--ENGITLRYIEFMD- 1311
Query: 277 AAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
T+ + + + ++I+ LK + L+ ++ + I +V
Sbjct: 1312 VGQTNGWDFSKVITKKEIIEKLKGN--------FALE--------PVEPNYIGEVAKRY 1354
>gi|86143254|ref|ZP_01061656.1| molybdenum cofactor biosynthesis protein A [Leeuwenhoekiella
blandensis MED217]
gi|85830159|gb|EAQ48619.1| molybdenum cofactor biosynthesis protein A [Leeuwenhoekiella
blandensis MED217]
Length = 335
Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 76/218 (34%), Gaps = 22/218 (10%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ G H Y L C + C +C + + L S + A A + ++
Sbjct: 9 TDTHGRKHNYLRISL---SEKCNLRCTYCMPHDGIPLSPRANLMSAEEIEAFAKVFVENG 65
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ ++ TGG+PL+ +LK L + ++ I + I K+
Sbjct: 66 VDKIRLTGGEPLVRKD--FSDILKRLAKLP--------VKLSITTNALLTHRFIADFKKY 115
Query: 204 GKP-VYIAIHANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGINDDPEIL 254
G + +++ + + +F+ I +L G + +VL+K N+D +
Sbjct: 116 GLKDINVSLDSLNAEKFNFITRRDQYKKAFTNIEQLIKEGFNVKINAVLMKNFNEDEIVE 175
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
+ ++ ++ D A ++ E
Sbjct: 176 FIKLTRERDINVRFIEFMPFDGNAWNKDKLVSQAEIIN 213
>gi|15807624|ref|NP_293989.1| molybdenum cofactor biosynthesis protein A [Deinococcus radiodurans
R1]
Length = 247
Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/252 (15%), Positives = 74/252 (29%), Gaps = 50/252 (19%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C + C +C E+ G + +LS ++ E ++ TGG+P
Sbjct: 17 VTDRCNLRCTYCMPAEVFGPDYAFLPRAELLSFEEIERLARVFVGLGA-EKLRITGGEPT 75
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L ++L L VQ L + ++ P L LK AG
Sbjct: 76 LRRD--LPELLARLAAFPGVQDLAMTTNGLLL------PRLAADLKAAGLQRVTI----S 123
Query: 216 PYEFSEEAIAAISRL--------------ANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ ++ L +AG+ + +V+ +G+ND+ L R
Sbjct: 124 LDSLDPQVFGEMNGLGVSPQKVLGGIEAALHAGLGVKINTVVKRGVNDEHLT--ELWRGL 181
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
E + G + + L SG G
Sbjct: 182 REFG----------PVRFIEFMDVGNHNGWNMDSVL---PSG---EVLARLAAEGGPLTP 225
Query: 322 IDTHNIKKVGNG 333
+ + + G
Sbjct: 226 VAPAHAARWRPG 237
>gi|134300005|ref|YP_001113501.1| radical SAM domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134052705|gb|ABO50676.1| Radical SAM domain protein [Desulfotomaculum reducens MI-1]
Length = 330
Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 80/217 (36%), Gaps = 42/217 (19%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C +YC C+R V +++ LS+ + + L I E +IF+GG+PL+
Sbjct: 3 ISWNTTNACNLYCEHCYRDAGVKAEEE--LSTDEGKRLLDQIAE-VGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ L + LR F + + I PE+ + LKE+G + + I +
Sbjct: 60 RPD------IYELVAHARSKGLRPVFGTNGTL-----ITPEVAKRLKESG-ALGMGISLD 107
Query: 215 H----------PYE-FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
E + A+ + AG+ + ++ + + E + +L V+
Sbjct: 108 SVDPAKHDKFRAQEGCWQAAVEGMRNCRRAGLPFQIHTTVM---DWNYEEVEDLTDFAVQ 164
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
+++ F + I L+
Sbjct: 165 EGAVAHHVF----------FLVPTGRAVNIEQESLRA 191
>gi|15644072|ref|NP_229121.1| astB/chuR-related protein [Thermotoga maritima MSB8]
gi|148270594|ref|YP_001245054.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
gi|157364077|ref|YP_001470844.1| radical SAM domain-containing protein [Thermotoga lettingae TMO]
gi|170289295|ref|YP_001739533.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
gi|222100244|ref|YP_002534812.1| Radical SAM domain protein [Thermotoga neapolitana DSM 4359]
gi|281412902|ref|YP_003346981.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
gi|4981877|gb|AAD36391.1|AE001786_4 astB/chuR-related protein [Thermotoga maritima MSB8]
gi|147736138|gb|ABQ47478.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
gi|157314681|gb|ABV33780.1| Radical SAM domain protein [Thermotoga lettingae TMO]
gi|170176798|gb|ACB09850.1| Radical SAM domain protein [Thermotoga sp. RQ2]
gi|221572634|gb|ACM23446.1| Radical SAM domain protein [Thermotoga neapolitana DSM 4359]
gi|281374005|gb|ADA67567.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
Length = 463
Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 8/183 (4%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+ L + VC + CR+C+ G + L + + + GG+PL
Sbjct: 83 RLALNVSQVCRLKCRYCYANAGTYGNPG-FMKRNVLVRTLDFFLSNYNVHNIHIFGGEPL 141
Query: 156 ILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKPVYIAI 211
L+ + ++++ + L K LR + + I+ + +Y+ +
Sbjct: 142 -LNIEMIEEMFRILTSKYAKKFNNLRITVATSLFVSEETINRFIKIYESYKDKFQIYMVV 200
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLL--KGINDDPEILANLMRTFVELRIKPY 269
+ P E + ++ +++ + + LL KG + E+ + + I
Sbjct: 201 SLDGPKEIQDNTRPSLDSKSSSFDRIKNNINLLKQKGFSISFEVTYTKLHKQLGWNILKI 260
Query: 270 YLH 272
Y +
Sbjct: 261 YKY 263
>gi|150387904|ref|YP_001317953.1| radical SAM domain-containing protein [Alkaliphilus metalliredigens
QYMF]
gi|149947766|gb|ABR46294.1| Radical SAM domain protein [Alkaliphilus metalliredigens QYMF]
Length = 335
Score = 54.5 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 73/216 (33%), Gaps = 40/216 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C +YC C+R V L++++ +A + I + +IF+GG+PL+
Sbjct: 3 ISWNTTNHCNMYCDHCYRDSGVKGSSE--LNTEEGKALIDEI-VLAGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVY------ 208
L L + LR + I P + + LK G
Sbjct: 60 RED------LFELIAYAKDRGLRPVLGTNGTF-----ITPAVAEKLKRVGTMGVGISLDS 108
Query: 209 IAIH----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ H H + AI + +AG+ + ++ N + E + +L VEL
Sbjct: 109 LDSHKHDGLRHYDGAWDGAIQGMRNCQSAGLPFQIHTTVMDWNNPELEAITDLA---VEL 165
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
++ F + I L+
Sbjct: 166 GAVAHHFF----------FLVPTGRAHNIEEESLRA 191
>gi|229166606|ref|ZP_04294358.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
gi|228616860|gb|EEK73933.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
Length = 338
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 24/171 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGRDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPELIQCLKEAGK 205
+ L ++++ L I V+ + + ++ R+ L L E
Sbjct: 79 LRKD--LPELIQRLNEIDGVEDIGLTTNGSLLKKFAPDLYKAGLSRVTVSL-DSLNEERF 135
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ N + +A I A AG+ + V+ KG N++ +
Sbjct: 136 -----SYLNGNRSKVKTVLAGIQAAAEAGMKIKMNMVVQKGKNEEDIVQMA 181
>gi|52787593|ref|YP_093422.1| molybdenum cofactor biosynthesis protein A [Bacillus licheniformis
ATCC 14580]
gi|163119684|ref|YP_080993.2| molybdenum cofactor biosynthesis protein A [Bacillus licheniformis
ATCC 14580]
gi|319648075|ref|ZP_08002292.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. BT1B_CT2]
gi|81608871|sp|Q65DY5|MOAA_BACLD RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|52350095|gb|AAU42729.1| MoaA [Bacillus licheniformis ATCC 14580]
gi|145903194|gb|AAU25355.2| MoaA [Bacillus licheniformis ATCC 14580]
gi|317389710|gb|EFV70520.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. BT1B_CT2]
Length = 341
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 55/259 (21%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C + C +C E+ G KG +LS ++ E + + ++ TGG+PL
Sbjct: 23 VTDRCNLRCTYCMPAEIFGQDYPFLPKGELLSFEELERLAKLFVHQFGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + +++ L IK ++ + + ++ P LK+AG
Sbjct: 83 MRKD--MPELVGKLAGIKGIRDIAMTTNGVLL------PVYADKLKKAGLKRVTV----S 130
Query: 216 PYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+E +A I AG+ + V+ KG+N+ + + + R F
Sbjct: 131 LDSLDDERFKSINGRGVSVSKVLAGIEAAKKAGLGVKINMVVQKGVNE--KDILPMARYF 188
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTI---EEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
E ++ D+ R ++ + +I+ D+P
Sbjct: 189 KEKGHILRFIEFMDVGNTNEWNRQSVVAKADIIRIINE---------------DMPIE-- 231
Query: 319 KVKIDTHNIKKVGNGSYCI 337
ID + +V +
Sbjct: 232 --PIDPNYEGEVAKRYRYL 248
>gi|194336426|ref|YP_002018220.1| molybdenum cofactor biosynthesis protein A [Pelodictyon
phaeoclathratiforme BU-1]
gi|194308903|gb|ACF43603.1| molybdenum cofactor biosynthesis protein A [Pelodictyon
phaeoclathratiforme BU-1]
Length = 326
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HR+ D + + + C + C +C R E G ++L + +A + E +V F
Sbjct: 9 HRHVDYVRIAVTSRCNLRCSYCMREEHEGRADTVSLLDKNEINTIIAVLAE-LGFSKVRF 67
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
TGG+PL+ + + +++ + ++ + + V R P LI
Sbjct: 68 TGGEPLLR--EGIAGLVREAKQHPSIKTVGLTTNG--VLLDRFLPSLIDA 113
>gi|95929921|ref|ZP_01312661.1| molybdenum cofactor synthesis-like [Desulfuromonas acetoxidans DSM
684]
gi|95133890|gb|EAT15549.1| molybdenum cofactor synthesis-like [Desulfuromonas acetoxidans DSM
684]
Length = 325
Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 22/175 (12%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQI 144
++ RY +I + C + CR+C V VLS ++ ++ + I
Sbjct: 3 LIDRYGRKINYLRLSVTDRCNMRCRYCMPAHGVEKVTHDDVLSYEELYR-ISQAAVTTGI 61
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
++ TGG+PL+ K + L+ L I ++ L + ++ E+ LK+AG
Sbjct: 62 EKIRVTGGEPLVR--KGIVPFLERLSRIDGLKQLVLTTNGLML------DEMAYDLKQAG 113
Query: 205 KPVYIAI----HANHPYEFSEEA--IAAISRLANA---GIILLSQSVLLKGINDD 250
+AN E + A + ++ LA A G+ + V+++G+ND
Sbjct: 114 VKHLNVSLDSLNANTFAEVTRGANLVKVLAGLAAAERVGLPVKLNMVVMRGVNDH 168
>gi|297617592|ref|YP_003702751.1| radical SAM protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145429|gb|ADI02186.1| Radical SAM domain protein [Syntrophothermus lipocalidus DSM 12680]
Length = 339
Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 71/215 (33%), Gaps = 39/215 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C ++C C+R + + L++++ + + I++ + +IF+GG+PL+
Sbjct: 3 VSWNTTNQCNMFCDHCYRDAGLKLSEE--LNTEEGKELIREIKK-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
+ L Q LR + + I E+ LKEAG
Sbjct: 60 RHD------IFELGDYARQQGLRPVLGTNGTL-----ITSEVATKLKEAGFAACGVSLDS 108
Query: 212 -------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ I L AG+ + ++ + E L ++ V+L
Sbjct: 109 LDAAKNDSFRKLENAFNLTLEGIDNLREAGVPFQIHTTVMDWNVGELEALTDMA---VKL 165
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
+++ F + G I
Sbjct: 166 GAVAHHIF----------FLVPTGRGLNIEEEALR 190
>gi|260886564|ref|ZP_05897827.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
gi|330839603|ref|YP_004414183.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
gi|260863707|gb|EEX78207.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
gi|329747367|gb|AEC00724.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
Length = 330
Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 73/216 (33%), Gaps = 40/216 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C +YC+ C+R G + LS+ + + L I + +IF+GG+PL
Sbjct: 3 ISWNTTNACNMYCKHCYRDA--GCKAEEELSTAEAKKLLDEIAR-AGFKIMIFSGGEPLT 59
Query: 157 LSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-----------EAG 204
L + L F + + I PE+ + LK ++
Sbjct: 60 RPDILELVEHATKLG-----LRSVFGTNGTL-----ITPEMARDLKAAGAMGMGISLDSM 109
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
P ++P + A+ + AG+ + ++ + E + + VEL
Sbjct: 110 SPAKHDTFRSYPGGW-AGAVEGMKNCRAAGLPFQIHTTVMDWNEKELEAITDFA---VEL 165
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
++ F + + I L+
Sbjct: 166 GAVAHHFF----------FLVPTGRAETIEEESLRA 191
>gi|315649901|ref|ZP_07902983.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex
V453]
gi|315274700|gb|EFU38082.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex
V453]
Length = 334
Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 84/226 (37%), Gaps = 26/226 (11%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E M ++S ++ A L + + +
Sbjct: 10 GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAILRVLAPM-GVSK 65
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V TGG+PL+ L+ +++ + I+ +Q + + ++ + L++
Sbjct: 66 VRLTGGEPLVRKD--LENLVRMIASIEGIQDISLTTNGIMLPSK---ARLLKEAGLTRIN 120
Query: 207 VYIAI-HANHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDP---EILAN 256
+ + H + + + I AG+ + VL+KG N+D I
Sbjct: 121 ISLDSLHEERYARITRGGHVSKVLEGIEAAYEAGLDPIKLNMVLMKGFNEDEIRDFIAMT 180
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHF---RLTI---EEGQKIVAS 296
L R I+ + A S+ R++ E G I
Sbjct: 181 LDRPLHVRFIEYMPIGQASDAWRDSYLPLSRVSEVCQEAGWSIQEE 226
>gi|226355448|ref|YP_002785188.1| molybdenum cofactor biosynthesis protein A [Deinococcus deserti
VCD115]
gi|226317438|gb|ACO45434.1| putative molybdenum cofactor biosynthesis protein A [Deinococcus
deserti VCD115]
Length = 337
Score = 53.4 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 75/221 (33%), Gaps = 45/221 (20%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFTGGDP 154
+ C + C +C + G V S+ + I+ ++ + ++ TGG+P
Sbjct: 21 VTDRCNLRCTYCMPASVFGPDYAFVPRSELL--SFEEIERLTRLFLILGVRKLRLTGGEP 78
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
+ L ++ L ++ V+ L + ++ P L + LK AG
Sbjct: 79 TLRRD--LSDLIARLARLEGVEDLAMTTNGLLL------PRLARELKSAGLRRVTVSLDS 130
Query: 212 -------HAN----HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
N HP + + I AG+ + +V+ +G+ND L L
Sbjct: 131 LDPDVFGQMNGLGVHPQQ----VLDGIEAALQAGLGVKINTVVQRGVNDQG--LRELWLA 184
Query: 261 FVE---------LRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
+ + + + D +S + EG +
Sbjct: 185 LRAQAPVRFIEFMDVGNHNGWNMDSVVPSSEVLARLSEGSE 225
>gi|224477241|ref|YP_002634847.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus carnosus
subsp. carnosus TM300]
gi|7674139|sp|Q9ZIM6|MOAA_STACT RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|3955209|gb|AAC83144.1| MoaA [Staphylococcus carnosus]
gi|222421848|emb|CAL28662.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 340
Score = 53.4 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +LS + E + + ++ TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDDFVFLPKDELLSFSEMERIAR-VYTHLGVKKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L K++ L I+ V+ + +
Sbjct: 79 MRRD--LYKLIAALNEIEGVEDIGLTTNGL 106
>gi|154687786|ref|YP_001422947.1| molybdenum cofactor biosynthesis protein A [Bacillus
amyloliquefaciens FZB42]
gi|166217238|sp|A7Z9P0|MOAA_BACA2 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|154353637|gb|ABS75716.1| MoaA [Bacillus amyloliquefaciens FZB42]
Length = 341
Score = 53.4 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G K +LS ++ E + + ++ TGG+PL
Sbjct: 23 VTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + +++K L I ++ + +
Sbjct: 83 MRKD--MPELIKKLARIPGLKDIAMTTNGS 110
>gi|193212999|ref|YP_001998952.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum
NCIB 8327]
gi|193086476|gb|ACF11752.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum
NCIB 8327]
Length = 333
Score = 53.4 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 92/267 (34%), Gaps = 45/267 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
D + + + C + C +C + E +K L + T A + + + I +V FTGG+P
Sbjct: 21 DYVRIAVTSACNLRCTYCLKNEEDADRKIDQLDADQTVAVIEVLAQM-GIRKVRFTGGEP 79
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HA 213
L+ + ++++ + + ++F + R ELI G + + A
Sbjct: 80 LLHPD--IVELVRRAKATPGIDTVKFTTNGI--LLDRYLDELIAA-GLDGINLSLDTLDA 134
Query: 214 NHPYEFS-----EEAIAAISRLANAGII---LLSQSVLLKGINDD-PEILANLMRTFVEL 264
+ + AA+ RL + I + +++L+GIN+D L R+ +L
Sbjct: 135 QKYRDITRRDRFASVRAALDRLLD--IPDMSVKINTLMLRGINNDEIPDFVELTRS-HKL 191
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQK-IVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++ L D +R G + I L +
Sbjct: 192 NVRFMELQPFDDQQI---WRTGKFMGAEMIREQLFQHYP--------------------Q 228
Query: 324 THNIKKVGNGSYCIT--DHHNIVHDYP 348
+ Y ++ + P
Sbjct: 229 LEAVTGRDTEHYSFRLSNYQGSIAIIP 255
>gi|325289531|ref|YP_004265712.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
gi|324964932|gb|ADY55711.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 332
Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 37/214 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R V ++ LS+ + E L I + +IF+GG+PL+
Sbjct: 3 VSWNTTNACNMYCDHCYRDSGVRQEEE--LSTAEAETMLEQIAR-AGFKIMIFSGGEPLM 59
Query: 157 LSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG----------K 205
L + L F + ++ EL Q LK AG
Sbjct: 60 RPDIVDLAAYARELG-----LRPVFGTNGTLL-----TAELAQKLKGAGAMGMGISLDSL 109
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
EEA+ + AG+ + ++ + + E L +
Sbjct: 110 DRAKHDQFRRYPGAWEEAVRGMRNCRQAGLPFQIHTTVMDWNSGELEALTDFAGKE---G 166
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
+++ F + + +
Sbjct: 167 AVAHHIF----------FLVPAGRAVSLEEEALK 190
>gi|328555376|gb|AEB25868.1| molybdenum cofactor biosynthesis protein A [Bacillus
amyloliquefaciens TA208]
gi|328913747|gb|AEB65343.1| molybdenum cofactor biosynthesis protein A [Bacillus
amyloliquefaciens LL3]
Length = 341
Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G K +LS ++ E + + ++ TGG+PL
Sbjct: 23 VTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + ++++ L I ++ + +
Sbjct: 83 MRKD--MPELIRKLARIPGLKDIAMTTNGS 110
>gi|308175399|ref|YP_003922104.1| molybdenum cofactor biosynthesis protein A [Bacillus
amyloliquefaciens DSM 7]
gi|307608263|emb|CBI44634.1| molybdenum cofactor biosynthesis protein A [Bacillus
amyloliquefaciens DSM 7]
Length = 344
Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G K +LS ++ E + + ++ TGG+PL
Sbjct: 23 VTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + ++++ L I ++ + +
Sbjct: 83 MRKD--MPELIRKLARIPGLKDIAMTTNGS 110
>gi|114566232|ref|YP_753386.1| radical SAM protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337167|gb|ABI68015.1| radical SAM domain protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 333
Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 75/217 (34%), Gaps = 43/217 (19%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C ++C C+R G++ LS++ + + I++ + +IF+GG+PL+
Sbjct: 3 VSWNTTNQCNMFCDHCYRDA--GARLEDELSTEQAKKLIEEIKK-AGFRIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ L Q LR V + I+PE+ Q LK+AG
Sbjct: 60 RPD------IFELGQYATRQGLRV---VMGTNGSLISPEVAQKLKKAG----FMAAGVSL 106
Query: 217 YEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + L +AG+ + ++ D+ E + + +
Sbjct: 107 DSLNPAKNNAFRKLDNAFQLTCEGMQNLKDAGLPFQVHTTVMDWNVDELEAICDFA---I 163
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
E+ Y++ F + G I
Sbjct: 164 EIGAMAYHVF----------FLVPTGRGADIEEEALR 190
>gi|212704755|ref|ZP_03312883.1| hypothetical protein DESPIG_02819 [Desulfovibrio piger ATCC 29098]
gi|212671818|gb|EEB32301.1| hypothetical protein DESPIG_02819 [Desulfovibrio piger ATCC 29098]
Length = 399
Score = 53.0 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 28/197 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I ++ C + C+ C G S+++ +A + + +IFTGGDP++
Sbjct: 55 IAWEVTRSCNLACKHCRAEAHPEPYPGE-FSTEEAKALIDTFPQVGNPI-IIFTGGDPMM 112
Query: 157 LSHKRLQKVLKTLRYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA---- 210
+ L H + F + I PEL + +KEAG
Sbjct: 113 RPD------VYELVAYAHNKGLTCAFSPNGTL-----ITPELARKIKEAGVNRCSISIDG 161
Query: 211 IHANHPYEFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
A EF + ++ I L AG+ + + + + + NL +
Sbjct: 162 ADAASHDEFRGVPGAFDASMRGIEYLKQAGVPFQINTTVTRNNLHSFKDIFNLCE---RI 218
Query: 265 RIKPYYLHHPDLAAGTS 281
+++ S
Sbjct: 219 GAAAWHIFLLVPMGRAS 235
>gi|317486219|ref|ZP_07945053.1| molybdenum cofactor biosynthesis protein A [Bilophila wadsworthia
3_1_6]
gi|316922518|gb|EFV43770.1| molybdenum cofactor biosynthesis protein A [Bilophila wadsworthia
3_1_6]
Length = 347
Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 64/197 (32%), Gaps = 24/197 (12%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
IP L ED G RY I L + C + C +C
Sbjct: 3 AIPPFAHLCEPAASLED---------GHGRTVRY---IRLSVTDRCNLRCTYCRSGMETF 50
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+VL ++ E + + + +V TGG+P K L+ LR +R
Sbjct: 51 IPHESVLRYEEMEQLVD-MAMDMGVEKVRLTGGEPFAR--KGFADFLERLRAAHPALDIR 107
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAI------HANHPYEFSEEAIAAISRLANA 233
+ ++ P ++ + + + + + + L +A
Sbjct: 108 VTTNGTLIGPHIQT---LKAIGLNAVNLSLDTFDRDKFEQITGRDLFGKVRENMDALLDA 164
Query: 234 GIILLSQSVLLKGINDD 250
GI +V L+G NDD
Sbjct: 165 GIPFKLNAVALRGFNDD 181
>gi|329929025|ref|ZP_08282827.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5]
gi|328937014|gb|EGG33443.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5]
Length = 334
Score = 52.6 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 49/230 (21%), Positives = 86/230 (37%), Gaps = 34/230 (14%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E M ++S ++ A + + + +
Sbjct: 10 GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAIMRVLAPM-GVSK 65
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V TGG+PL+ L+ ++ + I+ VQ + + ++ P + LKEAG
Sbjct: 66 VRLTGGEPLVRKD--LETLVHKIASIEGVQDISLTTNGIML------PSKARLLKEAGLT 117
Query: 207 VYIAIHANHPYE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDP---E 252
I I + E + + + I AG+ + VL+KG N+D
Sbjct: 118 -RINISLDSLQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNEDEIRDF 176
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHF---RLTI---EEGQKIVAS 296
I L R I+ + S+ R++ E G I
Sbjct: 177 IALTLDRPLHVRFIEYMPIGQASDTWRDSYLPLTRVSEVCQEAGWAIQEE 226
>gi|296132657|ref|YP_003639904.1| Radical SAM domain protein [Thermincola sp. JR]
gi|296031235|gb|ADG82003.1| Radical SAM domain protein [Thermincola potens JR]
Length = 331
Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 46/219 (21%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G++ L++++ +A L I + + +IF+GG+P +
Sbjct: 3 VSWNTTNQCNMYCDHCYRDA--GAKATEELNTEEGKALLDEIAK-AGFKIMIFSGGEPFM 59
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
L K L F + + I P++ + LKE + +
Sbjct: 60 REDIFDLVAHAKKLGLHP-----VFGTNGTL-----ITPDVAKKLKE----LGVMGVGIS 105
Query: 216 PYEFSEEAIAAISRL--------------ANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+E + +L AG+ + L+ D+ E + +
Sbjct: 106 LDSLDKEKHDNLRKLKGAWDGAVQGMINCREAGVPFQVHTTLMDWNYDEAEAITDFA--- 162
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
VE+ K ++ F + + I L+
Sbjct: 163 VEIGAKAHHFF----------FLVPTGRAKNIEEESLRA 191
>gi|194334917|ref|YP_002016777.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris
aestuarii DSM 271]
gi|194312735|gb|ACF47130.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris
aestuarii DSM 271]
Length = 336
Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 84 SPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQ 139
SPLK + RY + + C + C +C R E V + +G LS + + LA +
Sbjct: 10 SPLKPLSDRYRRTVDYVRLAVTSQCNLRCMYCMREEHTVYNPEGEALSGDEIVSMLAVLA 69
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ +V +TGG+PL+ + ++++ + ++ ++ + +
Sbjct: 70 RM-GVSKVRYTGGEPLLRQD--IVRLVRDAKALEGIETVSLTTNG 111
>gi|85857996|ref|YP_460198.1| molybdenum cofactor biosynthesis protein A [Syntrophus
aciditrophicus SB]
gi|85721087|gb|ABC76030.1| molybdenum cofactor biosynthesis protein A [Syntrophus
aciditrophicus SB]
Length = 329
Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 62/162 (38%), Gaps = 22/162 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C E + +LS +D ++ + I ++ TGG+PL+
Sbjct: 19 VTDRCNLRCRYCMPEEGISKLDHREILSLEDIVRSVK-VAAGVGIRKIRLTGGEPLVRKD 77
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPELIQCLKEAGKPVYI 209
+ +++ + + + + + + R+N + + E + +
Sbjct: 78 --IARLIGFISEVPEIDDIAMTTNGVLFADMAEQLKAAGLDRVNFSMDTMVSEKFRYISR 135
Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
H + AI + G+ + +V+++G NDD
Sbjct: 136 RDHL-------ADVRKAIFKALELGLEPVKINTVVIRGFNDD 170
>gi|119356568|ref|YP_911212.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeobacteroides DSM
266]
gi|119353917|gb|ABL64788.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeobacteroides DSM
266]
Length = 333
Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 90/255 (35%), Gaps = 32/255 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R+ + + + C + C +C R E LSS++ + + I ++ F
Sbjct: 16 QRHIEYARIAVTAHCNLRCTYCMREEHEYHTIADPELSSREVGKIIVALAS-IGIKKIRF 74
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC--------LK 201
TGG+PL+ + +++ + I ++ + + R ELI L
Sbjct: 75 TGGEPLLRKD--ISVLVRQAKSIAGIKTVSLTTNGI--LLDRHLDELIDAGLDAINLSLD 130
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRT 260
+ Y+A EF + LA A + V+++G+N D+ + L RT
Sbjct: 131 TLDRERYLA--ITRRNEFDRVMSNLETLLAKATFPVKLNVVMMRGVNGDEIKDFIELTRT 188
Query: 261 FVELRIKPYYLHHPDL--AAGTSHFRLTIEEGQK-IVASLKEKISGLCQPF------YIL 311
L ++ L D T F G I L+ G+ + +
Sbjct: 189 -HSLTVRFMELQPFDDNQIWKTGKFM-----GIDKITEQLRSLNPGVQKKQGKSTEYFSF 242
Query: 312 DLPGGYGKVKIDTHN 326
LPG G + +
Sbjct: 243 SLPGHQGSIAVIPAY 257
>gi|326434948|gb|EGD80518.1| molybdenum cofactor synthesis 1 isoform 2 [Salpingoeca sp. ATCC
50818]
Length = 399
Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 77/224 (34%), Gaps = 32/224 (14%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y L C + C++C E V S K +L+ + + +
Sbjct: 82 GRQHSYLRISL---TERCNLRCQYCMPEEGVQLSPKDELLTFDELVRLARIFASN-GVSK 137
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ TGG+PL+ +L +++ R + ++ + + + + LK+AG
Sbjct: 138 IRLTGGEPLLYP--QLSDLIREFRGMPGIESVGITTNGLTL------ARKLDALKDAGL- 188
Query: 207 VYIAIHAN------HPYEFSEEAIAA--------ISRLANAGIILLSQSVLLKGINDDPE 252
H N H ++F+ + I +AG+ VL + +NDD
Sbjct: 189 ----THLNVSLDTFHEHKFNIISRRRGLDRVFRGIDAAIDAGLTPKINVVLTRNVNDDEL 244
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ + ++ D ++ +E + +
Sbjct: 245 LDFVEWTREKPVDVRFIEYMPFDGNRWNMDRFVSYKEMLERIEQ 288
>gi|108757868|ref|YP_632408.1| molybdenum cofactor biosynthesis protein MoaA [Myxococcus xanthus
DK 1622]
gi|108461748|gb|ABF86933.1| molybdenum cofactor biosynthesis protein MoaA [Myxococcus xanthus
DK 1622]
Length = 334
Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 75/231 (32%), Gaps = 45/231 (19%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C G + +L ++ E + I V TGG+PLI
Sbjct: 32 ITDRCNFRCSYCSPASWGGKRD--LLGPEELERITSVFARM-GIRRVRLTGGEPLIRPD- 87
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+ + + + + +Q L S + L + L+EAG N
Sbjct: 88 -ILDIARRIAAVPGIQHLAITSNASHL------ERLARPLREAG-----VTQLN--LSLD 133
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEI-LANLMRTFVELRIKPYYLHHPDLAAG 279
R++ G +L+G++ A+L V +R
Sbjct: 134 TLLAETFRRISKQG----DFDAVLRGVDAAAGAGYASLKLNVVVMR-------------- 175
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
+ EE ++A + G P +I +P G G + T + +
Sbjct: 176 ----GVNDEEASALIAYAHAR--GF-TPRFIELMPFGQG-TPVPTAELVER 218
>gi|313896785|ref|ZP_07830333.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312974702|gb|EFR40169.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 332
Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C V +LS ++ + + I +V TGG+PL+
Sbjct: 16 VTDCCNLRCRYCMPAHGVKKLAHEDILSYEEILRDVRALAA-LGIRKVRLTGGEPLVRRD 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
+ +++ L+ I ++ + +
Sbjct: 75 --IVTLVRGLKEIPGIETVAVTTNGV 98
>gi|253574226|ref|ZP_04851568.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251846703|gb|EES74709.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 335
Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y + + + C + C +C E MV ++S ++ ++ + + +
Sbjct: 9 GRKHDY---LRISVTDRCNLRCVYCMPAEGMVFQPHEEIMSYEEIAETVSALTPM-GLRK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ TGG+PL+ L++++ L I ++ + + +
Sbjct: 65 IRLTGGEPLVRKD--LEQLVAMLSSIPGIEDIALTTNGMFLAK 105
>gi|261409709|ref|YP_003245950.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
Y412MC10]
gi|261286172|gb|ACX68143.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
Y412MC10]
Length = 334
Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 86/230 (37%), Gaps = 34/230 (14%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E M ++S ++ + + + + +
Sbjct: 10 GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIASIMRVLAPM-GVSK 65
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V TGG+PL+ L+ ++ + I+ VQ + + ++ P + LKEAG
Sbjct: 66 VRLTGGEPLVRKD--LETLVHQIASIEGVQDISLTTNGIML------PSKARLLKEAGLT 117
Query: 207 VYIAIHANHPYE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDP---E 252
I I + E + + + I AG+ + VL+KG N+D
Sbjct: 118 -RINISLDSLQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNEDEIRDF 176
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHF---RLTI---EEGQKIVAS 296
I L R I+ + S+ R++ E G I
Sbjct: 177 IALTLDRPLHVRFIEYMPIGQASDTWRDSYLPLSRVSEVCQEAGWAIQEE 226
>gi|154174652|ref|YP_001407497.1| molybdenum cofactor biosynthesis protein A [Campylobacter curvus
525.92]
gi|166217241|sp|A7GWA5|MOAA_CAMC5 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|112803789|gb|EAU01133.1| molybdenum cofactor biosynthesis protein A [Campylobacter curvus
525.92]
Length = 322
Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 58/178 (32%), Gaps = 22/178 (12%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+V +Y + + C CR+C L S + + +
Sbjct: 2 LVDKYGRVVDYLRISVTQRCNFRCRYCMPTTPFSWTPKENLLSFEELFLFVKVAIDEGVT 61
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPE 195
++ TGG+PL+ L +K + K L + ++ RIN
Sbjct: 62 KIRLTGGEPLVRKD--LDVFVKMISDYKPDIDLALTTNGFMLRHYAKRLRDAGLKRINMS 119
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L L E H E + +AG+ + +V LKG+NDD I
Sbjct: 120 L-DTLNEQKAKFIAQKSVLH------EVLTGFEAALDAGLKVKINTVALKGVNDDELI 170
>gi|297616758|ref|YP_003701917.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus
lipocalidus DSM 12680]
gi|297144595|gb|ADI01352.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus
lipocalidus DSM 12680]
Length = 326
Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 12/157 (7%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C V +LS ++ + + + I +V TGG+PL+ +
Sbjct: 16 VTDRCNLRCRYCMPEAGVELKPHSEILSLEEIHRIIK-VGTRVGIRKVRLTGGEPLVRRN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKEAGKPVYIAIHA 213
L ++++ +R I + + + + + L L Y I
Sbjct: 75 --LSRLVQMIRTIDLIDDVAITTNGLLFPEMAGELKEAGLHRLNVSLDTMNPEKYSFITR 132
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N + A + LA + +V+++GINDD
Sbjct: 133 N--GSLKQALRAIETALALEFHPVKINTVVMRGINDD 167
>gi|160879625|ref|YP_001558593.1| molybdenum cofactor biosynthesis protein A [Clostridium
phytofermentans ISDg]
gi|160428291|gb|ABX41854.1| molybdenum cofactor biosynthesis protein A [Clostridium
phytofermentans ISDg]
Length = 332
Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 68/171 (39%), Gaps = 15/171 (8%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
++ +Y I + C + C +C ++ + ++L+ ++ I
Sbjct: 1 MIDQYKRSIDYMRISITDRCNLRCTYCMPEDVEKLEHESILTYEEILRICKS-ASSLGIR 59
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++ TGG+P++ K++ ++ I ++ + + ++ + + E + + G
Sbjct: 60 KIKITGGEPMVRKDAV--KLMANIKAIPGIEFVTLTTNG-VLLEEHV--EELAKIPLDGV 114
Query: 206 PVYIAI-HANHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDD 250
V + + + + + + I +L AGI V KG+N++
Sbjct: 115 NVSLDTLNTDTFKKITRRDEFLKVWNGIQKLIEAGIPTKINCVPQKGVNEE 165
>gi|219669369|ref|YP_002459804.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
gi|219539629|gb|ACL21368.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
Length = 332
Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 68/215 (31%), Gaps = 38/215 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G Q L++ + + L I + +IF+GG+PL+
Sbjct: 3 VSWNTTNACNMYCDHCYRDA--GCQAEEELNTAEAKTLLEQIAR-AGFKIMIFSGGEPLL 59
Query: 157 LSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG----------K 205
L +L F + + I E+ + LKEAG
Sbjct: 60 RPDIVELVAYATSLG-----LRPVFGTNGTL-----ITVEMARRLKEAGAMGMGISLDSL 109
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ EEA+ + G+ + ++ D+ E + + V
Sbjct: 110 HIDKHNQFRKYPRAWEEAVQGMRNCREVGLPFQIHTTVMDWNRDELEAITDFA---VAEG 166
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
++ F + I L+
Sbjct: 167 AVAHHFF----------FLVPTGRAVSIEEESLRA 191
>gi|157163980|ref|YP_001466045.1| molybdenum cofactor biosynthesis protein A [Campylobacter concisus
13826]
gi|166217240|sp|A7ZB87|MOAA_CAMC1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|112801191|gb|EAT98535.1| molybdenum cofactor biosynthesis protein A [Campylobacter concisus
13826]
Length = 322
Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 22/175 (12%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
++ +Y + + C CR+C L + + + +
Sbjct: 2 LIDKYGRVVDYLRISVTQRCNFRCRYCMPTTPFSWTPKENLLTFEELFLFVKVAIDEGVK 61
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPE 195
++ TGG+PL+ L +K + K L + ++ +RIN
Sbjct: 62 KIRITGGEPLVRKD--LDVFIKMISDYKPDIDLALTTNGFMLPHFAKRLKDAGLKRINMS 119
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
L L E H E +A +AG+ + +V LKG NDD
Sbjct: 120 L-DTLNEQKAKFIAQKSVLH------EVLAGFEAALDAGLKVKINTVALKGFNDD 167
>gi|307570581|emb|CAR83760.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
L99]
Length = 333
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 72/177 (40%), Gaps = 23/177 (12%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V TGG+PL+ + + ++++ L I ++ + + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAKK------AEALKEAGLT 116
Query: 207 VYIAI----HANHPYEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDPEI 253
HA+H + ++ + I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADHFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEIT 173
>gi|89894967|ref|YP_518454.1| hypothetical protein DSY2221 [Desulfitobacterium hafniense Y51]
gi|89334415|dbj|BAE84010.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 332
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 69/215 (32%), Gaps = 38/215 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G Q L++ + + L I + + +IF+GG+PL+
Sbjct: 3 VSWNTTNACNMYCDHCYRDA--GCQAEEELNTAEAKTLLEQIAK-AGFKIMIFSGGEPLL 59
Query: 157 LSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG----------K 205
L +L F + + I E+ + LKEAG
Sbjct: 60 RPDIVELVAYATSLG-----LRPVFGTNGTL-----ITVEMARRLKEAGAMGMGISLDSL 109
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ EEA+ + G+ + ++ D+ E + + V
Sbjct: 110 HIDKHNQFRKYPRAWEEAVQGMRNCREVGLPFQIHTTVMDWNRDELEAITDFA---VAEG 166
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
++ F + I L+
Sbjct: 167 AVAHHFF----------FLVPTGRAVSIEEESLRA 191
>gi|241676232|ref|XP_002400329.1| molybdenum cofactor biosynthesis pathway protein, putative [Ixodes
scapularis]
gi|215504220|gb|EEC13714.1| molybdenum cofactor biosynthesis pathway protein, putative [Ixodes
scapularis]
Length = 381
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 56/152 (36%), Gaps = 20/152 (13%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQK 122
+EL ++P + G H Y L C + C +C E V +
Sbjct: 39 PQELIQPANSHDEPA--KVLTDSFGRKHSYLRISL---TEKCSLRCVYCMPAEGVPLTPN 93
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+LSS + LA + + +V TGG+PL+ +++ L I ++ L +
Sbjct: 94 EKLLSSDEIVH-LATLFATFGVNKVRLTGGEPLVRKDTL--DIVEKLSQIPQLETLGMTT 150
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
++ + LK+AG H N
Sbjct: 151 NGLVL------SRKLADLKKAGL-----THLN 171
>gi|168215418|ref|ZP_02641043.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
NCTC 8239]
gi|182382388|gb|EDT79867.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
NCTC 8239]
Length = 331
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 91/245 (37%), Gaps = 25/245 (10%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I L C + C +C ++ +++ + + I +V
Sbjct: 12 KYGREIDYLRISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKV 70
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ + + ++K + I ++ + + I+ ++ LK +
Sbjct: 71 RLTGGEPLVR--EGIVDLIKNINKIPEIEEICLTTNG-ILLGDKVKELSENGLK--RVNI 125
Query: 208 YIAI-HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + E + ++ + +I + + + +V+L+ N D + +L+
Sbjct: 126 SLDTLKEDRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFNKD--EILDLINLA 183
Query: 262 VELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPG 315
+ I ++ F+ +T E +I+ K+ +S L P + + G
Sbjct: 184 YKNPIDLRFIELM-PIGEGKKFKGVTNSEILEIIKKEKKVLSDGKPLRLNGPAKYISIEG 242
Query: 316 GYGKV 320
GK+
Sbjct: 243 FKGKI 247
>gi|110801520|ref|YP_699075.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
SM101]
gi|123341686|sp|Q0SS32|MOAA_CLOPS RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|110682021|gb|ABG85391.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
SM101]
Length = 323
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 91/245 (37%), Gaps = 25/245 (10%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I L C + C +C ++ +++ + + I +V
Sbjct: 4 KYGREIDYLRISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKV 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ + + ++K + I ++ + + I+ ++ LK +
Sbjct: 63 RLTGGEPLVR--EGIVDLIKNINKIPEIEEICLTTNG-ILLGDKVKELSENGLK--RVNI 117
Query: 208 YIAI-HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + E + ++ + +I + + + +V+L+ N D + +L+
Sbjct: 118 SLDTLKEDRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFNKD--EILDLINLA 175
Query: 262 VELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPG 315
+ I ++ F+ +T E +I+ K+ +S L P + + G
Sbjct: 176 YKNPIDLRFIELM-PIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEG 234
Query: 316 GYGKV 320
GK+
Sbjct: 235 FKGKI 239
>gi|4589922|dbj|BAA76928.1| molybdenum cofactor biosynthesis protein A [Clostridium
perfringens]
Length = 323
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 91/245 (37%), Gaps = 25/245 (10%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I L C + C +C ++ +++ + + I +V
Sbjct: 4 KYGREIDYLRISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKV 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ + + ++K + I ++ + + I+ ++ LK +
Sbjct: 63 RLTGGEPLVR--EGIVDLIKNINKIPEIEEICLTTNG-ILLGDKVKELSENGLK--RVNI 117
Query: 208 YIAI-HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + E + ++ + +I + + + +V+L+ N D + +L+
Sbjct: 118 SLDTLKEDRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFNKD--EILDLINLA 175
Query: 262 VELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPG 315
+ I ++ F+ +T E +I+ K+ +S L P + + G
Sbjct: 176 YKNPIDLRFIELM-PIGEGKKFKGVTNSEILEIIKKEKKVLSDGKPLRLNGPAKYISIEG 234
Query: 316 GYGKV 320
GK+
Sbjct: 235 FKGKI 239
>gi|238928202|ref|ZP_04659962.1| molybdenum cofactor biosynthesis protein A [Selenomonas flueggei
ATCC 43531]
gi|238884162|gb|EEQ47800.1| molybdenum cofactor biosynthesis protein A [Selenomonas flueggei
ATCC 43531]
Length = 331
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C V + VL+ ++ + + + +V TGG+PL+
Sbjct: 16 VTDCCNLRCRYCMPAHGVKKLRHADVLTYEEILRDVRALAA-LGVRKVRLTGGEPLVRRD 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ ++++ L+ I ++ + + V + EL+
Sbjct: 75 --ITRLVRGLKEIPGIETVALTTNG--VLLGTMMDELLDA 110
>gi|317497456|ref|ZP_07955776.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895242|gb|EFV17404.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
5_1_63FAA]
Length = 440
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 17/144 (11%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+E E D D + L + R +K+ C +C +C +
Sbjct: 120 KESAAESIEVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYC-----IIPYARG 174
Query: 125 VLSSKDTEAALAYIQE--KSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHV 175
+ S+ E L I K E + TG D L L +L+ + I V
Sbjct: 175 RVRSRKMEEVLEEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLTDLLEEIAKIPEV 231
Query: 176 QILRFHSRVPIVDPQRINPELIQC 199
+ +R S P + L +
Sbjct: 232 KRIRLGSLEPGFITKDTLDRLSKM 255
>gi|304437610|ref|ZP_07397565.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304369423|gb|EFM23093.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 331
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C V + VL+ ++ + + + +V TGG+PL+
Sbjct: 16 VTDCCNLRCRYCMPAHGVKKLRHADVLTYEEILRDVRVLAA-LGVRKVRLTGGEPLVRRD 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ ++++ L+ I ++ + + V + EL+
Sbjct: 75 --ITRLVRGLKEIPGIETVALTTNG--VLLGTMMDELLDA 110
>gi|255321817|ref|ZP_05362967.1| molybdenum cofactor biosynthesis protein A [Campylobacter showae
RM3277]
gi|255300921|gb|EET80188.1| molybdenum cofactor biosynthesis protein A [Campylobacter showae
RM3277]
Length = 322
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 21/190 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C++C + + L S + + + ++ TGG+PL+
Sbjct: 17 VTQRCNFRCKYCMPKTPFSWEPRENLLSFEELFLFVKVCLDEGVKKIRITGGEPLLRKD- 75
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGKPVYIA 210
L K + + L + ++ RIN L LK
Sbjct: 76 -LDKFIAMINEHSPDVDLAITTNGFMLKHYAKALKNAGLKRINMSL-DSLKTEKAKFLAQ 133
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
H E +A + AG+ + +V L+G+NDD + +L+ + + +
Sbjct: 134 KSVLH------EVLAGLDAALEAGLKVKLNTVALRGVNDD--EIVSLLEFARSMGCQIRF 185
Query: 271 LHHPDLAAGT 280
+ + + T
Sbjct: 186 IEYMENIHAT 195
>gi|310821937|ref|YP_003954295.1| molybdenum cofactor biosynthesis protein moaa [Stigmatella
aurantiaca DW4/3-1]
gi|309395009|gb|ADO72468.1| Molybdenum cofactor biosynthesis protein MoaA [Stigmatella
aurantiaca DW4/3-1]
Length = 335
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 18/134 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C G + +LS+ + E ++ I V TGG+PLI
Sbjct: 30 VTDRCNFRCTYCSPASWGGKKD--LLSALEFERIVSVFASM-GIQRVRLTGGEPLIRPD- 85
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+ ++ + L + V+ + + + L L+EAG N
Sbjct: 86 -ILEIAQRLSALPGVERVAITTNASHL------ERLAVPLREAG-----VSQLN--ISLD 131
Query: 221 EEAIAAISRLANAG 234
+ R++ G
Sbjct: 132 TLSAETFRRISKQG 145
>gi|291519254|emb|CBK74475.1| RNA modification enzyme, MiaB family [Butyrivibrio fibrisolvens
16/4]
Length = 382
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 23/128 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+D E + + + EV+ TG
Sbjct: 88 HTRAFVKVQDGCNQFCSYC-----IIPFARGRIRSRDIEDVVEEVTGLATNGYKEVVITG 142
Query: 152 GDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ LS L +L+ + I V+ +R S ++PQ + E + + K
Sbjct: 143 ---IHLSSYGNGTDYNLADLLEAIEKIDGVERIRLGS----LEPQIVTEEFAKRVSALSK 195
Query: 206 PVYIAIHA 213
+ H
Sbjct: 196 ---MCPHF 200
>gi|313112748|ref|ZP_07798396.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310624947|gb|EFQ08254.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 322
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 16/157 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ +C + CR+C + +L+ ++ A + I V TGG+PL+ +
Sbjct: 16 VTDLCNLRCRYCMPDGVPKLAHEDILTYEEFLRLAALFAQC-GIDTVRITGGEPLVR--R 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP---Y 217
++++ L+ I ++ + + ++ +L L V I++ HP
Sbjct: 73 GVEQLTAGLKAIPGIRRVALTTNGVLLAQ-----KLPALLAAGLDSVNISLDTLHPETFR 127
Query: 218 EFS-----EEAIAAISRLANAGIILLSQSVLLKGIND 249
+ I +GI + V G+N+
Sbjct: 128 RITGKDELAAVQNGIRAALASGIPVKLNCVPQPGVNE 164
>gi|289578123|ref|YP_003476750.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter italicus Ab9]
gi|289527836|gb|ADD02188.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter italicus Ab9]
Length = 449
Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 58/156 (37%), Gaps = 26/156 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S++ E L ++ S E++ TG
Sbjct: 155 RTRAYVKIQDGCNQYCTYC-----IIPYARGPVRSREPEKILEEVRRFADSGYKEIVLTG 209
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++K + I ++ +R S P+ + E I L +
Sbjct: 210 IHIASYGKD---LKNIGLLDIIKRIHEIDGIKRIRLSSIEPVFLTEEFVKE-IAKLPKMC 265
Query: 205 KPVYIAIHANHPYEF--------SEEAIAAISRLAN 232
+ ++++ + ++E + I RL
Sbjct: 266 RHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLRK 301
>gi|315506786|ref|YP_004085673.1| radical sam domain protein [Micromonospora sp. L5]
gi|315413405|gb|ADU11522.1| Radical SAM domain protein [Micromonospora sp. L5]
Length = 768
Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWE-----VIF 149
+LK+ C + C C+ E + ++ + A I E + + VI
Sbjct: 14 VLKVHARCDLACDHCYVYEHADQSWRRRPVRMTPEVLRTAAGRIAEHAAAHDLPDVTVIL 73
Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GG+PL+L +RL +VL LR I V LR + V ++ L L E V
Sbjct: 74 HGGEPLLLGAERLGEVLADLRRVIDPVTRLRLGMQTNGVL---LSERLCDLLAEHDVAVG 130
Query: 209 I 209
+
Sbjct: 131 V 131
>gi|260221009|emb|CBA29146.1| Molybdenum cofactor biosynthesis protein A [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 385
Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 92/276 (33%), Gaps = 45/276 (16%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI-------LLKLLHVCPVYCRFC 112
P +E + P P G++ D + + + C C +C
Sbjct: 8 VFPLIDERS---SGIPVPATAATGMPHPGMLGSVSDTLGRPLRDLRISVTDRCNFRCSYC 64
Query: 113 FRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
+E+ +LS ++ + ++ TGG+PL+ + ++ +++
Sbjct: 65 MPKEVFHKDYPYLPHSALLSFEEITTLAKQFVA-LGVQKIRLTGGEPLLRKN--IETLIE 121
Query: 168 TLRYI----KHVQILRFHSRVPIVDP----------QRINPELIQCLKEAGKPVYIAIHA 213
L I H L + ++ QR+ L L +
Sbjct: 122 QLAAITTPEGHALDLTLTTNGSLLAKKARSLKDAGLQRVTVSL-DGLDDRIFKA-----M 175
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
N + + I +AG+ + V+ +G N+ + + + R F + Y+
Sbjct: 176 NDVDFPVADVLNGIEAAHSAGLGPIKVNMVVKRGTNE--QEILPMARHFRGSGVALRYIE 233
Query: 273 HPDLAAGTSHFRLTIEE-GQKIVASLKEKISGLCQP 307
+ D T+ +R+ Q ++ L++ + P
Sbjct: 234 YMD-VGATNGWRMDEVLPSQDVLKRLRDHLP--LIP 266
>gi|313896883|ref|ZP_07830430.1| putative heme d1 biosynthesis radical SAM protein NirJ2
[Selenomonas sp. oral taxon 137 str. F0430]
gi|320530825|ref|ZP_08031863.1| radical SAM domain protein [Selenomonas artemidis F0399]
gi|312974330|gb|EFR39798.1| putative heme d1 biosynthesis radical SAM protein NirJ2
[Selenomonas sp. oral taxon 137 str. F0430]
gi|320136911|gb|EFW28855.1| radical SAM domain protein [Selenomonas artemidis F0399]
Length = 333
Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 74/216 (34%), Gaps = 40/216 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C +YC C+R G + LS+++ + L I + + +IF+GG+PL
Sbjct: 4 ISWNTTNACNMYCAHCYRDA--GCRAEEELSTEEAKKLLREIAK-AGFRIMIFSGGEPLT 60
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG----------- 204
L + L I F + + I+ + Q LK+AG
Sbjct: 61 RPDIIELVAYARGLGLIP-----VFGTNGTL-----IDRTMAQALKDAGACGMGISLDSL 110
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
P ++P ++ + G+ + ++ + + L + VE+
Sbjct: 111 DPQKHDTFRSYPGGWTGAVR-GMENCRAVGLPFQIHTTVM---DWNQHELEAMTDFAVEI 166
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
K ++ F + + I L+
Sbjct: 167 GAKAHHFF----------FLVPTGRAETIEEESLRA 192
>gi|78060080|ref|YP_366655.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383]
gi|77964630|gb|ABB06011.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383]
Length = 374
Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 50/227 (22%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C RE G+ + SS+ A L I + ++ TGG+PL+
Sbjct: 48 VIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEPLL 107
Query: 157 LSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRINP 194
+ L+ +++ L + V + LR SRV + I+
Sbjct: 108 RRN--LEALIERLAALTTVDGKPVEIALTTNGSLLAAKARTLRDAGLSRVTVSL-DAIDD 164
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEI 253
+ + + +A PV +A I AG + +V+ +G+NDD
Sbjct: 165 AVFRRMSDADVPV-------------SRVLAGIEAAQAAGLAPVKVNAVIERGVNDDQ-- 209
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
+ L+R F + + ++ + D G S + + ++++
Sbjct: 210 ILPLVRHFRQSGVAVRFIEYMD-VGGASFWSGDKVVPAARMRELIDE 255
>gi|317128920|ref|YP_004095202.1| molybdenum cofactor biosynthesis protein A [Bacillus
cellulosilyticus DSM 2522]
gi|315473868|gb|ADU30471.1| molybdenum cofactor biosynthesis protein A [Bacillus
cellulosilyticus DSM 2522]
Length = 339
Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 78/214 (36%), Gaps = 30/214 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-AALAYIQ----EKSQIWEVIFTGGDPL 155
+ C CR+C E+ + ++ +AYI + + I +V TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPPEIFDKNFQFLPKNEVLTLEEMAYITKLFVKAASIKKVRITGGEPL 79
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPEL-IQCLKEAG 204
+ + + ++ +R I+ ++ + + ++ R+ L ++
Sbjct: 80 MR--QNVSHLIALIREIEAIEDIAMTTNGSLLPKYAKELKENGLDRVTISLDCLDDEKFR 137
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
I N E I AG+ + V+ +G+ND + + + F E
Sbjct: 138 YINGRDISVNTVLE-------GIKAAKKAGLHVKINMVVKRGMND--KDILPMAHYFKET 188
Query: 265 RIKPYYLHHPDLAAGTS---HFRLTIEEGQKIVA 295
I ++ + D+ ++ +E I+
Sbjct: 189 GIVLRFIEYMDVGNSNGWKLDHVVSKKEILSIIN 222
>gi|168214364|ref|ZP_02639989.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
CPE str. F4969]
gi|170714163|gb|EDT26345.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
CPE str. F4969]
Length = 331
Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 91/245 (37%), Gaps = 25/245 (10%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I L C + C +C ++ Q +++ + + I +V
Sbjct: 12 KYGREIDYLRISLTDKCNLRCAYCMEKDHNDFIQNDKLMTLDEILRVVKECAS-IGIKKV 70
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ + + ++K + I ++ + + I+ ++ LK +
Sbjct: 71 RLTGGEPLVR--EGVVDLIKNINKIPEIEEICLTTNG-ILLGDKVKELSENGLK--RVNI 125
Query: 208 YIAI-HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + E + ++ + +I + + + +V+LK N D + +L+
Sbjct: 126 SLDTLKEDRFKEITRVGTLDKVLYSIEKCLENNVKVKINTVVLKDFNKD--EILDLVNLA 183
Query: 262 VELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPG 315
+ I ++ F+ +T E +I+ K +S L P + + G
Sbjct: 184 CKNPIDLRFIELM-PIGEGKKFKGVTNSEILEIIKKEKNVLSDGKTLRLNGPAKYISIEG 242
Query: 316 GYGKV 320
GK+
Sbjct: 243 FKGKI 247
>gi|116625479|ref|YP_827635.1| GTP cyclohydrolase subunit MoaA [Candidatus Solibacter usitatus
Ellin6076]
gi|116228641|gb|ABJ87350.1| GTP cyclohydrolase subunit MoaA [Candidatus Solibacter usitatus
Ellin6076]
Length = 331
Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQ 139
N +PL HR D + + + C + C +C V ++ +L ++ E + +
Sbjct: 1 MNATPLVDSFHRVHDNLRISVTDRCNIRCFYCMPETGVTFVERREILDFEEIERFVR-VA 59
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
I ++ TGG+PL+ L ++ L I +Q L + ++ Q
Sbjct: 60 AGLGIRKLRVTGGEPLLRRD--LPVLIGRLACIPGIQDLALTTNGVLLAEQ 108
>gi|255523321|ref|ZP_05390291.1| molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
gi|255512975|gb|EET89245.1| molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
Length = 318
Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 23/162 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTGGDPLILS 158
L C + C +C + V + + E L I+ I ++ +TGG+PLIL
Sbjct: 16 LTDRCNLRCIYCMPEQGVSKKCHEDVIR--FEEVLKIIKSAVPLGIKKIRYTGGEPLILK 73
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+ + ++ I+ ++ + + ++ +L LKEAG + I + E
Sbjct: 74 N--ISSLISETSKIQQIKDIAITTNGILLY------DLADELKEAGLK-RVNISLDTLKE 124
Query: 219 -----FS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + + AI + + GI + +VL+KGINDD
Sbjct: 125 DKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDD 166
>gi|291559329|emb|CBL38129.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium
SSC/2]
Length = 440
Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 17/144 (11%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+E E D D + L + R +K+ C +C +C +
Sbjct: 120 KESAAESIEVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYC-----IIPYARG 174
Query: 125 VLSSKDTEAALAYIQE--KSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHV 175
+ S+ E L I K E + TG D L L +L+ + I V
Sbjct: 175 RVRSRKMEEVLEEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLIDLLEEIAKIPEV 231
Query: 176 QILRFHSRVPIVDPQRINPELIQC 199
+ +R S P + L +
Sbjct: 232 KRIRLGSLEPGFITKDTLDRLSKM 255
>gi|222150403|ref|YP_002559556.1| molybdenum cofactor biosynthesis protein MoaA homolog [Macrococcus
caseolyticus JCSC5402]
gi|222119525|dbj|BAH16860.1| molybdenum cofactor biosynthesis protein MoaA homolog [Macrococcus
caseolyticus JCSC5402]
Length = 336
Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +LS ++ +A + + + +V TGG+PL
Sbjct: 19 VTDRCNFRCTYCMPKEIFGDDYVFLPKDELLSFEELTR-IAKVYAQLGVKKVRITGGEPL 77
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L +++ + I+ ++ + +
Sbjct: 78 LRRD--LPDLIREIHAIEGIEDIGLTTNGL 105
>gi|206890412|ref|YP_002249883.1| molybdenum cofactor biosynthesis protein A [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|226707391|sp|B5YJ09|MOAA_THEYD RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|206742350|gb|ACI21407.1| molybdenum cofactor biosynthesis protein A [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 322
Score = 50.7 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 71/187 (37%), Gaps = 35/187 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
++ C + C +C E + + +LS ++ + I I ++ TGG+PL+
Sbjct: 16 IIDRCNLRCIYCMPEEGITNLLPHHEILSYEEILKIVE-IGVDLGITKIRITGGEPLLR- 73
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY------IAIH 212
K + ++ L I+ ++ + + LK+ K +Y + +
Sbjct: 74 -KGIVSFIERLARIEGIRDIGMTTNGV-------------LLKKFAKDLYNAGLKRVNVS 119
Query: 213 ANHPYE----------FSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTF 261
+ E ++ I NAG+ + V++KGINDD L
Sbjct: 120 LDSLDENKFRAITRVGLIDDVFEGIDEAKNAGLQPVKVNVVVMKGINDDEIEKFALWSKK 179
Query: 262 VELRIKP 268
VE +I+
Sbjct: 180 VEYQIRF 186
>gi|167767374|ref|ZP_02439427.1| hypothetical protein CLOSS21_01893 [Clostridium sp. SS2/1]
gi|167711349|gb|EDS21928.1| hypothetical protein CLOSS21_01893 [Clostridium sp. SS2/1]
Length = 440
Score = 50.7 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 17/144 (11%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+E E D D + L + R +K+ C +C +C +
Sbjct: 120 KESAAESIEVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYC-----IIPYARG 174
Query: 125 VLSSKDTEAALAYIQE--KSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHV 175
+ S+ E L I K E + TG D L L +L+ + I V
Sbjct: 175 RVRSRKMEEVLEEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLIDLLEEIAKIPEV 231
Query: 176 QILRFHSRVPIVDPQRINPELIQC 199
+ +R S P + L +
Sbjct: 232 KRIRLGSLEPGFITKDTLDRLSKM 255
>gi|15920304|ref|NP_375973.1| coenzyme PQQ synthesis protein [Sulfolobus tokodaii str. 7]
gi|15621086|dbj|BAB65082.1| 347aa long hypothetical coenzyme PQQ synthesis protein [Sulfolobus
tokodaii str. 7]
Length = 347
Score = 50.7 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/294 (15%), Positives = 94/294 (31%), Gaps = 62/294 (21%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ CP+ C+ C R + L++++ + L I + ++ V+FTGGD
Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELTTEEGKKLLEEISQFGKVV-VVFTGGD 64
Query: 154 PLILSH-KRLQKVLKTLRYI-------------KHVQILRFHSRVPIVDPQRINPELIQC 199
PL L K+L I ++ ++ + + PE
Sbjct: 65 PLSRDDIFELMDYAKSLGLIVSIAPAPSYRLNEDTIKNIKNSALYMSISLDGYKPETHDW 124
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILANLM 258
L+ G Y +L GI + +++ K ++ +A L
Sbjct: 125 LRGFGNYRYAINGI---------------KLGLKYGIQVQVNTLVWKRSYEELPYIAKL- 168
Query: 259 RTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG-- 315
+L +K + + GT + E+ + ++ L ++S ++ P
Sbjct: 169 --LKDLGVKVWEVFFLIPVGRGTLELDIPREKYKDVIDFLV-EVSRYNIVVRTVEAPFFR 225
Query: 316 ---------------------GYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
G K +D + ++ + YP
Sbjct: 226 RAKLEYKEVKNELIRKLKELLGESKSPVDKSILPTRDGAGVIFISYNGDI--YP 277
>gi|189500137|ref|YP_001959607.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Chlorobium phaeobacteroides BS1]
gi|189495578|gb|ACE04126.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Chlorobium phaeobacteroides BS1]
Length = 255
Score = 50.7 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 68/171 (39%), Gaps = 12/171 (7%)
Query: 93 YPDRI-LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP RI + C C +C E+V S++ E A++ + + V+ T
Sbjct: 37 YPGRISAVIYTMGCNFRCVYCHNPELVVSERLAETVPLVNEELFAWLSLNRALLDAVVIT 96
Query: 151 GGDPLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEA------ 203
GG+P + H L + ++ ++ ++ V+I + P + I+ EL+ +
Sbjct: 97 GGEPTM--HAVLPEFIRRIKTLELDVKIDTNGTN-PAMLEGLIDDELVDYVALDIKAPLV 153
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+ + ++ L AGI ++ LL+ +D+ +I
Sbjct: 154 YRQYVSICGGECTESLLDRIRGSLDLLHRAGIPCEVRTTLLRPYHDENDIY 204
>gi|228985250|ref|ZP_04145415.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774545|gb|EEM22946.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 337
Score = 50.7 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G+ + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGADYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-------- 207
+ L K+++ L I+ ++ + + + Q + LKEAG
Sbjct: 79 LRKD--LPKLIERLAKIEGIKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLDAI 130
Query: 208 --YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Y+ N ++ + + AG+ + V+ KG+ND
Sbjct: 131 EDYVFQKINGRNVSTKPVLKGMEEAKAAGLEVKVNMVVKKGMNDS 175
>gi|168207240|ref|ZP_02633245.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
E str. JGS1987]
gi|170661412|gb|EDT14095.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
E str. JGS1987]
Length = 331
Score = 50.7 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 91/245 (37%), Gaps = 25/245 (10%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I L C + C +C ++ +++ + + I +V
Sbjct: 12 KYGREIDYLRISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKV 70
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ + + ++K + I ++ + + I+ ++ LK +
Sbjct: 71 RLTGGEPLVR--EGIVDLIKNINKIPEIEEICLTTNG-ILLGDKVKELSENGLK--RVNI 125
Query: 208 YIAI-HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + E + ++ + +I + + + +V+L+ N D + +L+
Sbjct: 126 SLDTLKEDRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFNKD--EILDLINLA 183
Query: 262 VELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPG 315
E I ++ F+ +T E +I+ K+ +S L P + + G
Sbjct: 184 CENPIDLRFIELM-PIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEG 242
Query: 316 GYGKV 320
GK+
Sbjct: 243 FKGKI 247
>gi|18310772|ref|NP_562706.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
str. 13]
gi|20141618|sp|Q9WX96|MOAA_CLOPE RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|18145453|dbj|BAB81496.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
str. 13]
Length = 323
Score = 50.7 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 91/245 (37%), Gaps = 25/245 (10%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I L C + C +C ++ +++ + + I +V
Sbjct: 4 KYGREIDYLRISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKV 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ + + ++K + I ++ + + I+ ++ LK +
Sbjct: 63 RLTGGEPLVR--EGIVDLIKNINKIPEIEEICLTTNG-ILLGDKVKELSENGLK--RVNI 117
Query: 208 YIAI-HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + E + ++ + +I + + + +V+L+ N D + +L+
Sbjct: 118 SLDTLKEDRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFNKD--EILDLINLA 175
Query: 262 VELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPG 315
E I ++ F+ +T E +I+ K+ +S L P + + G
Sbjct: 176 CENPIDLRFIELM-PIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEG 234
Query: 316 GYGKV 320
GK+
Sbjct: 235 FKGKI 239
>gi|302870435|ref|YP_003839072.1| radical SAM domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302573294|gb|ADL49496.1| Radical SAM domain protein [Micromonospora aurantiaca ATCC 27029]
Length = 768
Score = 50.7 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 12/121 (9%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWE-----VIF 149
+LK+ C + C C+ E + ++ + A I E + + VI
Sbjct: 14 VLKVHARCDLACDHCYVYEHADQSWRRRPVRMTPEVLRTAAGRIAEHAAAHDLPDVTVIL 73
Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GG+PL+L +RL +VL LR I V LR + V ++ +L L E V
Sbjct: 74 HGGEPLLLGAERLDEVLADLRRVIAPVTRLRLGMQTNGVL---LSEQLCDLLAEHDVAVG 130
Query: 209 I 209
+
Sbjct: 131 V 131
>gi|327311114|ref|YP_004338011.1| Radical SAM domain-containing protein [Thermoproteus uzoniensis
768-20]
gi|326947593|gb|AEA12699.1| Radical SAM domain protein [Thermoproteus uzoniensis 768-20]
Length = 370
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 97/307 (31%), Gaps = 69/307 (22%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD---TEAALAYIQEKSQIWEVI 148
+ P + ++ CP+ CR C ++ G + + + E + + + E+I
Sbjct: 12 KRPLLVFWEVTRACPLACRHCRADAILKPLPGELSTWEAKAFLEQLVDFGRPPP---ELI 68
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207
TGGDPL+ L ++L + + +P ++ L + L E +
Sbjct: 69 VTGGDPLMRLD--LMEILDYAKELG----------IPTSLAPAVSKNLFEALPELRGRIK 116
Query: 208 YIAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+I + E EE AI L AGI + +V+ + + L
Sbjct: 117 SASISLDGLKEVHEELRGVPGVFDSTIEAIKALMGAGIRVQVNTVVWRKSFPQLPDVFKL 176
Query: 258 MRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEE--------------GQKI-------VA 295
+ ++ + + ++ +E G +I
Sbjct: 177 IYDL---GVRVWEVFFLIETGRAVKALDISPQEYEDAVQFLVDASRYGVQIRTVEAPFYR 233
Query: 296 SLK-EKISG--LCQPFY------ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH- 345
K ++ SG P Y + +L G K +D + + V+
Sbjct: 234 RAKIQRASGLSYTSPAYEKLVARLRELMGEP-KKPLDPTVVPTRDGHGIIFVAYDGTVYP 292
Query: 346 ----DYP 348
YP
Sbjct: 293 SGFLPYP 299
>gi|229047248|ref|ZP_04192848.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
gi|228724115|gb|EEL75460.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
Length = 340
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 22 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L K+++ L I V+ + +
Sbjct: 81 LR--RGLPKLIERLNKIDGVEDIGLTTNGS 108
>gi|296504074|ref|YP_003665774.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
gi|296325126|gb|ADH08054.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
Length = 338
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L K+++ L I V+ + +
Sbjct: 79 LR--RGLPKLIERLNKIDGVEDIGLTTNGS 106
>gi|229179852|ref|ZP_04307198.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
172560W]
gi|228603533|gb|EEK61008.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
172560W]
Length = 340
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 22 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L K+++ L I V+ + +
Sbjct: 81 LR--RGLPKLIERLNKIDGVEDIGLTTNGS 108
>gi|30021670|ref|NP_833301.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|228959754|ref|ZP_04121429.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229110990|ref|ZP_04240550.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock1-15]
gi|229128840|ref|ZP_04257816.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-Cer4]
gi|229146135|ref|ZP_04274511.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST24]
gi|29897225|gb|AAP10502.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|228637346|gb|EEK93800.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST24]
gi|228654545|gb|EEL10407.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-Cer4]
gi|228672474|gb|EEL27758.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock1-15]
gi|228799884|gb|EEM46826.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 340
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 22 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L K+++ L I V+ + +
Sbjct: 81 LR--RGLPKLIERLNKIDGVEDIGLTTNGS 108
>gi|324327466|gb|ADY22726.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 338
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L + ++ L I V+ + +
Sbjct: 79 LR--RGLPQFIERLNKIDGVEDIGLTTNGS 106
>gi|206969370|ref|ZP_03230325.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
gi|206736411|gb|EDZ53569.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
Length = 338
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L K+++ L I V+ + +
Sbjct: 79 LR--RGLPKLIERLNKIDGVEDIGLTTNGS 106
>gi|182625681|ref|ZP_02953450.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
D str. JGS1721]
gi|177909083|gb|EDT71558.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
D str. JGS1721]
Length = 331
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 91/245 (37%), Gaps = 25/245 (10%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I L C + C +C ++ +++ + + I +V
Sbjct: 12 KYGREIDYLRISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKV 70
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ + + ++K + I ++ + + I+ ++ LK +
Sbjct: 71 RLTGGEPLVR--EGVVDLIKNINKIPEIEEICLTTNG-ILLGDKVKELSENGLK--RVNI 125
Query: 208 YIAI-HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + E + ++ + +I + + + +V+LK N D + +L+
Sbjct: 126 SLDTLKEDKFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILKDFNKD--EILDLINLA 183
Query: 262 VELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPG 315
+ I ++ F+ +T E +I+ K+ +S L P + + G
Sbjct: 184 YKNPIDLRFIELM-PIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEG 242
Query: 316 GYGKV 320
GK+
Sbjct: 243 FKGKI 247
>gi|315302537|ref|ZP_07873372.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL
F6-596]
gi|313629099|gb|EFR97397.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL
F6-596]
Length = 333
Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKS 142
+ G VH Y I + + C + C +C E + VLS + + I K
Sbjct: 5 TDKFGRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFME-IMVKF 60
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
I +V TGG+PL+ + + ++++ L I ++ + + + + + LKE
Sbjct: 61 GIKKVRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAKK------AEALKE 112
Query: 203 AGKPVYIAI----HANHPYEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDPE 252
AG HA+ + ++ + I + AG + VL+KG NDD
Sbjct: 113 AGLTRVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEAGLFPIKLNVVLIKGQNDDEI 172
Query: 253 I 253
Sbjct: 173 T 173
>gi|218234531|ref|YP_002368381.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
gi|218162488|gb|ACK62480.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
Length = 338
Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L K+++ L I V+ + +
Sbjct: 79 LR--RGLPKLIERLNKIDGVEDIGLTTNGS 106
>gi|167463117|ref|ZP_02328206.1| molybdenum cofactor biosynthesis protein A [Paenibacillus larvae
subsp. larvae BRL-230010]
Length = 334
Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G VH Y + + + C + C +C E M +L+ + + + +
Sbjct: 8 RYGRVHDY---LRISVTDRCNLRCVYCMPEEGMEFEPDDHLLTFNEITTVVRVLAR-LGV 63
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
++ TGG+PL+ K ++ ++ L I ++ + + + P
Sbjct: 64 RKLRLTGGEPLVR--KHIEDLVNRLSSIPGIEDIALTTNGMFLGP 106
>gi|295707098|ref|YP_003600173.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium DSM
319]
gi|294804757|gb|ADF41823.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium DSM
319]
Length = 338
Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G+ +LS + E + +V TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGADYPFLPAENILSFDELERLTRLFAS-LGVKKVRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ K L ++ L+ I+ + + +
Sbjct: 79 LR--KGLPDLINRLKQIEGIDDIAITTNGS 106
>gi|15895263|ref|NP_348612.1| molybdenum cofactor biosynthesis protein MoaA [Clostridium
acetobutylicum ATCC 824]
gi|24212002|sp|Q97HL8|MOAA_CLOAB RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|15024974|gb|AAK79952.1|AE007703_7 Molybdenum cofactor biosynthesis enzyme MoaA, Fe-S oxidoreductase
[Clostridium acetobutylicum ATCC 824]
gi|325509409|gb|ADZ21045.1| Molybdenum cofactor biosynthesis enzyme MoaA, Fe-S oxidoreductase
[Clostridium acetobutylicum EA 2018]
Length = 318
Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 72/208 (34%), Gaps = 32/208 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C + Q+ +S D L I +V +TGG+PL+ ++
Sbjct: 16 VTDRCNLRCIYCMPKMKGYIQENNKISCSDIFKLLR-AAVSVGINKVRYTGGEPLL--NE 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIH 212
+ K++ + + + + I+ PQ LK +
Sbjct: 73 EISKIIYETSKLPQINDIAITTNG-ILLPQMAKDLKKAGLKRVNISLDTLKSDTFTKITN 131
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF-VELRIKPYY 270
N + ++ + L + +VL+KGIND + NL R VE+R
Sbjct: 132 FN---QITKVIDGIDTCLKLNLKPVKINTVLIKGINDLEVNDFVNLSREMPVEIRFIEL- 187
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+ I EG KI +
Sbjct: 188 --------------MPIGEGAKIYEKGR 201
>gi|228966456|ref|ZP_04127509.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228793178|gb|EEM40728.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 340
Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 22 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L K+++ L I V+ + +
Sbjct: 81 LR--RGLPKLIERLHKIDGVEDIGLTTNGS 108
>gi|218898660|ref|YP_002447071.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
gi|218544787|gb|ACK97181.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
Length = 338
Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L K+++ L I V+ + +
Sbjct: 79 LR--RGLPKLIERLHKIDGVEDIGLTTNGS 106
>gi|75762416|ref|ZP_00742285.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228902038|ref|ZP_04066203.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
IBL 4222]
gi|74490091|gb|EAO53438.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228857624|gb|EEN02119.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
IBL 4222]
Length = 340
Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 22 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L K+++ L I V+ + +
Sbjct: 81 LR--RGLPKLIERLHKIDGVEDIGLTTNGS 108
>gi|189426171|ref|YP_001953348.1| radical SAM protein [Geobacter lovleyi SZ]
gi|189422430|gb|ACD96828.1| Radical SAM domain protein [Geobacter lovleyi SZ]
Length = 354
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 63/218 (28%), Gaps = 36/218 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + C + C C R + ++ + + L I S+ V+ +GG+
Sbjct: 7 PKWIAWETTQKCNLRCVHC-RCSSESTSSEGDFTTDEGKRLLEEIAAFSKPV-VVLSGGE 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL+ L + +L + + + + E+ +K+A +
Sbjct: 65 PLMRPDIFELAEHGTSLG-----LRMCMATNGAL-----VTDEVCHKMKQADIKMVSLSL 114
Query: 213 ANHPYEFSEEAIAAI----------SRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
++ + G L S K D L ++
Sbjct: 115 DGSTAAVHDDFRQCVGAFEGVVRAADAFRRNGQKFLINSSFTKRNQHDIAETFKLAKSL- 173
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+Y+ + G++I+ L K
Sbjct: 174 --GATAWYMFMI----------VPTGRGEEIMNELISK 199
>gi|326941284|gb|AEA17180.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 338
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNEKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L K+++ L I V+ + +
Sbjct: 79 LR--RGLPKLIERLNKIDGVEDIGLTTNGS 106
>gi|228940652|ref|ZP_04103217.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973571|ref|ZP_04134154.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228980129|ref|ZP_04140444.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
Bt407]
gi|228779611|gb|EEM27863.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
Bt407]
gi|228786158|gb|EEM34154.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228819031|gb|EEM65091.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 340
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 22 VTDRCNFRCRYCMPEEIFGPDYSFLSNEKILSFDEIERITR-IFVSLGVRKLRITGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L K+++ L I V+ + +
Sbjct: 81 LR--RGLPKLIERLNKIDGVEDIGLTTNGS 108
>gi|297544398|ref|YP_003676700.1| MiaB-like tRNA modifying protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842173|gb|ADH60689.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 449
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 58/156 (37%), Gaps = 26/156 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S++ E L ++ S E++ TG
Sbjct: 155 RTRAYVKIQDGCNQYCTYC-----IIPYARGPVRSREPEKILEEVKRFADSGYKEIVLTG 209
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++K + I ++ +R S P+ + E I L +
Sbjct: 210 IHIASYGKD---LKNIGLLDIIKRIHEIDGIKRIRLSSIEPVFLTEEFVKE-IAKLPKMC 265
Query: 205 KPVYIAIHANHPYEF--------SEEAIAAISRLAN 232
+ ++++ + ++E + I RL
Sbjct: 266 RHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLRK 301
>gi|251798581|ref|YP_003013312.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
JDR-2]
gi|247546207|gb|ACT03226.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
JDR-2]
Length = 333
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y + + + C + C +C E M + +LS + + I +
Sbjct: 9 GREHDY---LRISVTDRCNLRCLYCMPEEGMEFADASHLLSYDHIVEVVQT-AAELGITK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ TGG+PLI L +++ L+ I ++ + +
Sbjct: 65 LRITGGEPLIRPD--LDSLIRRLKAIPGIEDIALTTNGM 101
>gi|124005079|ref|ZP_01689921.1| molybdenum cofactor biosynthesis protein A [Microscilla marina ATCC
23134]
gi|123989331|gb|EAY28892.1| molybdenum cofactor biosynthesis protein A [Microscilla marina ATCC
23134]
Length = 334
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 72/177 (40%), Gaps = 19/177 (10%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + K +LS ++ E + + + ++ TGG+P +
Sbjct: 22 VTDRCNLRCFYCMPEEGIKYLPKKHLLSYEEMERLVRLLASM-GVNKIRLTGGEPFLRKD 80
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC--------LKEAGKPVYIAI 211
L ++T+R I+ + L + V ++ P +++ L K ++
Sbjct: 81 --LINFMQTIRNIEGINELNITTNG--VLTEQYIPAMVKMGISSVNLSLDTLDKERFLK- 135
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI-LANLMRTFVELRIK 267
EF + + + L +GI V++ G N + + LA L RT + ++
Sbjct: 136 -ITRRNEFD-KVMRCLDALIESGIKTKINMVVMAGQNTEDIVPLAELTRT-HAIGVR 189
>gi|87312365|ref|ZP_01094457.1| molybdopterin cofactor synthesis protein A [Blastopirellula marina
DSM 3645]
gi|87284930|gb|EAQ76872.1| molybdopterin cofactor synthesis protein A [Blastopirellula marina
DSM 3645]
Length = 333
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E V + +L+ ++ E + + + TGG+PL+
Sbjct: 22 VTDRCNIRCFYCMPLENVQFKPRAELLTFEEIERVAR-LAVSLGVRKFRLTGGEPLVR-- 78
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+L ++++ L I V+ L + ++ Q
Sbjct: 79 AQLHELIQRLAAIPGVEDLALTTNGVLLADQ 109
>gi|226305828|ref|YP_002765788.1| molybdenum cofactor biosynthesis protein MoaA [Rhodococcus
erythropolis PR4]
gi|226184945|dbj|BAH33049.1| molybdenum cofactor biosynthesis protein MoaA [Rhodococcus
erythropolis PR4]
Length = 352
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 80/210 (38%), Gaps = 20/210 (9%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +LS+ + + E+ I EV FTGG+PL+ S
Sbjct: 42 ITEKCSLRCTYCMPEEGLPAIAAEDLLSADEIVRVVGIGVERVGIREVRFTGGEPLMRSD 101
Query: 160 --KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-IHANHP 216
K + + I L + ++ + + V + + H
Sbjct: 102 LEKIIAGCAARVPGIP----LAMTTNAVGLEHR---AAKLAAAGLTRVNVSLDSVDRAHF 154
Query: 217 YEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
E + +A I A AG L +VL++ + A+L++ ++ ++ +
Sbjct: 155 AELTRRDRLPSVLAGIRAAAVAGLAPLKVNAVLMR---ETLHGAADLLQWCLDAGVELRF 211
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+ L A + R + ++++ L E+
Sbjct: 212 IEQMPLDADHAWARENMVTAAELLSVLSER 241
>gi|160895345|ref|ZP_02076116.1| hypothetical protein CLOL250_02904 [Clostridium sp. L2-50]
gi|156863038|gb|EDO56469.1| hypothetical protein CLOL250_02904 [Clostridium sp. L2-50]
Length = 439
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 58/183 (31%), Gaps = 27/183 (14%)
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
+ E D + + PL R +K+ C +C +C + + S
Sbjct: 120 VTDEGMLDISAEKEYEPLTINSTLEHTRAYVKIQDGCNQFCSYC-----IIPYVRGRIRS 174
Query: 129 KDTEAALAYIQ--EKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILRFH 181
+D + + ++ + + E++ TG + L V+ + I+ ++ +R
Sbjct: 175 RDIASIIEEVERLALTGVKEIVLTGIHISSYGKDKENEVGLADVIDAISKIESIKRIRLG 234
Query: 182 SRVPIVDPQRINPELIQCL-----KEAGKPVYIAIHANHP------YEFSEEAIAAISRL 230
S ++P I E I + + + N EE L
Sbjct: 235 S----LEPSIITDEFIDRIVDNEKVCPHFHLSLQSGCNTVLKRMNRKYTCEEYFEKCEML 290
Query: 231 ANA 233
A
Sbjct: 291 RKA 293
>gi|242278011|ref|YP_002990140.1| radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
gi|242120905|gb|ACS78601.1| Radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
Length = 343
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 84/226 (37%), Gaps = 32/226 (14%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ ++ L+L VC + C +C+ G + L ++ A+ ++ +I
Sbjct: 20 LQNKQLLTAELELSRVCDLRCIYCYASS--GEKLNNELDFEEITDAVDQCRDLGARKIII 77
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GG+P++ R+ V++ + + +++ + RI PE+ L G
Sbjct: 78 LGGGEPMLYP--RIMDVIRYIHELGLEIELFSNGT--------RITPEIASELYSMGVQP 127
Query: 208 YIAIHANHPY---------EFSEEAIAAISRLANAG-----IILLSQSVLLKGINDDPEI 253
I ++ P + + ++ L AG I + +Q+++ +
Sbjct: 128 VIKFNSLDPQIQDMLAGKKDAHKAIRQGLNNLLEAGYSKGDIPIGAQTII---CRQNYAE 184
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI--EEGQKIVASL 297
+ + R +I PY+ D H L + E+ ++ L
Sbjct: 185 IPEMWRWLRTRKIIPYFETITDQGRAKDHMELALNPEQIGELFDEL 230
>gi|145220160|ref|YP_001130869.1| GTP cyclohydrolase subunit MoaA [Prosthecochloris vibrioformis DSM
265]
gi|145206324|gb|ABP37367.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeovibrioides DSM
265]
Length = 351
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 18/170 (10%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAALAYIQEKSQIWEVIF 149
HR + + C + C +C R E G T +S + ++ + E + I ++
Sbjct: 32 HRQVSYARIAVTGACNLRCAYCMREEHESDSSGRTKMSFTELTTLISVLAE-AGITKIRL 90
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
TGG+PL+ + ++ T + ++ + + ++D L L V +
Sbjct: 91 TGGEPLLRGD--IADLVATAKNTPGIKTVSITTNGLLLDRH-----LDALLSAGIDAVNM 143
Query: 210 AIHANHPYEF--------SEEAIAAISRLAN-AGIILLSQSVLLKGINDD 250
+I + F E A + RL + + L V+L+GINDD
Sbjct: 144 SIDSLRADRFLAITRRNEFERTKANLDRLLSLESVPLKINVVMLRGINDD 193
>gi|225850334|ref|YP_002730568.1| molybdenum cofactor biosynthesis protein A [Persephonella marina
EX-H1]
gi|225645594|gb|ACO03780.1| molybdenum cofactor biosynthesis protein A [Persephonella marina
EX-H1]
Length = 321
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C +L ++ + + + + +V TGG+PL+
Sbjct: 10 VTDKCNLKCFYCRPDNSEFVPHDEILRYEEIARLVKAMTKY-GLRKVRITGGEPLVRP-- 66
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+L++++K L+ I + + + +
Sbjct: 67 QLEELVKMLKDIPQINDISLTTNAITLSKH 96
>gi|256374624|ref|YP_003098284.1| molybdenum cofactor biosynthesis protein A [Actinosynnema mirum DSM
43827]
gi|255918927|gb|ACU34438.1| molybdenum cofactor biosynthesis protein A [Actinosynnema mirum DSM
43827]
Length = 341
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 78/210 (37%), Gaps = 25/210 (11%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + + +LS ++ + + + +V FTGG+PL+
Sbjct: 31 LTDKCNLRCTYCMPAEGLDWLRGPELLSDEELVRVIGIAVTRLGVTDVRFTGGEPLLR-- 88
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKEAGKPVYIAIHA 213
+ L+ VL ++ + + + L + +
Sbjct: 89 RGLEDVLAATTALEPRPRTSMTTNGISLATRAAGLKAAGLDRVNVSLDTLDRERF----- 143
Query: 214 NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
E + + +A ++ AG+ + SVL++G+NDD + L+ VE +
Sbjct: 144 ---RELTRRDRLPDVLAGLAAAREAGLEPVKINSVLMRGVNDDEAV--ALVEFAVEHGYQ 198
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
++ L R + Q+I+ +L
Sbjct: 199 LRFIEQMPLDPQHGWDRSEMVTAQEILDAL 228
>gi|300856502|ref|YP_003781486.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
ljungdahlii DSM 13528]
gi|300436617|gb|ADK16384.1| predicted molybdenum cofactor biosynthesis protein A [Clostridium
ljungdahlii DSM 13528]
Length = 322
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C +E + + G +L +D + I ++ +TGG+PLI+
Sbjct: 16 LTDRCNLRCIYCMPKEGIVKRPYGDLLRFEDILKIIK-AAATLGINKIRYTGGEPLIMKD 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP---VYIAI-HANH 215
++ +++ IK + + + ++ ++ LKEAG + + A+
Sbjct: 75 --IEYLIRETANIKGITDVAITTNGILLC------DMADKLKEAGLKRVNISLDTLKADK 126
Query: 216 PYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + + +I + + G+ + +VLLKG ND
Sbjct: 127 YKFITRCGNLDAVLKSIDKCLSIGLTPVKINTVLLKGFNDT 167
>gi|218903282|ref|YP_002451116.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
gi|218538331|gb|ACK90729.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
Length = 337
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 26/166 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALA-YIQEKSQIWEVIFTGGDP 154
++ C C +C E+ G + +L+ + E +I+ + ++ TGG+P
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFIRM--GVNKIRLTGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAG 204
L+ L ++ L + ++ + + + Q R+N L +++
Sbjct: 78 LLRKD--LPHLIARLAKLDGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDRV 134
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 135 FQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|301055055|ref|YP_003793266.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI]
gi|300377224|gb|ADK06128.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar
anthracis str. CI]
Length = 338
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|147677311|ref|YP_001211526.1| Fe-S oxidoreductases [Pelotomaculum thermopropionicum SI]
gi|146273408|dbj|BAF59157.1| predicted Fe-S oxidoreductases [Pelotomaculum thermopropionicum SI]
Length = 330
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 71/200 (35%), Gaps = 37/200 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC+ C+R G++ LS+++ A + I + +IF+GG+PL+
Sbjct: 3 VSWNTTNACNMYCKHCYRDA--GAKAAEELSTEEGLALIDQIAG-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ ++ R + LR F + + I E + LKEAG V
Sbjct: 60 RDD--IFTLVARARE----RGLRPVFGTNGTL-----ITGETARRLKEAGAAVMGI---- 104
Query: 215 HPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
+ A+ + AG+ + ++ G N D + L
Sbjct: 105 SLDSVDPKSHDDFRATPGAWQGAVDGMRACREAGLPFQVHTTVM-GWNKD--EVERLTDF 161
Query: 261 FVELRIKPYYLHHPDLAAGT 280
V + +++
Sbjct: 162 AVRMGAVGHHIFFLVPTGRA 181
>gi|126458652|ref|YP_001054930.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM
11548]
gi|126248373|gb|ABO07464.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM
11548]
Length = 309
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 85/217 (39%), Gaps = 29/217 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ C C FC G Q +G+ L+++D E A +Y+ K +++ TGG+PL+
Sbjct: 15 YVVDDECNYNCLFC---HFEGQQRRQGSTLTAEDYEFA-SYVFSKLGVYDFKLTGGEPLL 70
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ K+++ + + V + +R L K + + ++IH P
Sbjct: 71 RRD--IDKIVEAIARVAAVS---ITTNGL--LLRRWVDRL---YKAGLRKINVSIHTADP 120
Query: 217 YEF-------SEEAIAAISRL---ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
++ + + L N G+ + +V+L+GIN D + + L++ L
Sbjct: 121 EKYSKVVGAPTWAFKEVLRGLQESRNRGLAIKLNAVVLRGINTDDKSVKELVKLAASLDA 180
Query: 267 KPYYLHHP---DLAAGTSHFRLTIEEGQKIVASLKEK 300
++ + IE +IV L +
Sbjct: 181 SLQFIELMPSGSGLKVFGDYYEPIETIAEIVTRLGGR 217
>gi|289550128|ref|YP_003471032.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus
lugdunensis HKU09-01]
gi|315659242|ref|ZP_07912106.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
lugdunensis M23590]
gi|289179660|gb|ADC86905.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus
lugdunensis HKU09-01]
gi|315495667|gb|EFU83998.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
lugdunensis M23590]
Length = 340
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +L+ ++ E +A I + + ++ TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDDFVFLPKDELLTFEEIER-IAEIYAELGVKKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ + L +++ L I+ ++ + +
Sbjct: 79 LRRN--LYQLIARLNKIEGIEDIGLTTN 104
>gi|261419016|ref|YP_003252698.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
Y412MC61]
gi|319765832|ref|YP_004131333.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
Y412MC52]
gi|261375473|gb|ACX78216.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
Y412MC61]
gi|317110698|gb|ADU93190.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
Y412MC52]
Length = 341
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 70/184 (38%), Gaps = 14/184 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + A LA + + ++ TGG+PL
Sbjct: 24 VIDQCNFRCVYCMPAEVFGPNFRFLAEDQLLTVDEM-ALLAECFVELGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP--IVDPQRINPELIQCLKEAGKPV--YIAI 211
+ L +++ L I ++ + + + +R+ +Q + + + I
Sbjct: 83 LRRD--LDVLIERLSMIPGLRDVALTTNGIHLVKWAKRLKAAGLQRVNVSLDALDDDIFR 140
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
+ N + + I AG+ + V+ KG ND + +L I ++
Sbjct: 141 NMNGIGVGAAPVLKGIEAAREAGLGVKVNMVVKKGWNDSQIVPMAAYFK--DLGIPLRFI 198
Query: 272 HHPD 275
D
Sbjct: 199 EFMD 202
>gi|196034109|ref|ZP_03101519.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
gi|195993183|gb|EDX57141.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
Length = 338
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|52141964|ref|YP_084863.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
gi|51975433|gb|AAU16983.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
Length = 338
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|228916198|ref|ZP_04079768.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228843396|gb|EEM88474.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 338
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|229031224|ref|ZP_04187231.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
gi|228730091|gb|EEL81064.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
Length = 338
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
+ + L ++++ L I V+ + + ++ ++
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGSLLKKFALD 114
>gi|118478814|ref|YP_895965.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
str. Al Hakam]
gi|196044540|ref|ZP_03111775.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB108]
gi|225865551|ref|YP_002750929.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
gi|118418039|gb|ABK86458.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
str. Al Hakam]
gi|196024575|gb|EDX63247.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB108]
gi|225786709|gb|ACO26926.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
Length = 338
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|196038233|ref|ZP_03105542.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
NVH0597-99]
gi|196030641|gb|EDX69239.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
NVH0597-99]
Length = 338
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|49478276|ref|YP_037649.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49329832|gb|AAT60478.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 338
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|47568929|ref|ZP_00239621.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
G9241]
gi|47554413|gb|EAL12772.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
G9241]
Length = 338
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|313904622|ref|ZP_07837997.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
gi|313470592|gb|EFR65919.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
Length = 457
Score = 49.9 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 50/319 (15%), Positives = 105/319 (32%), Gaps = 58/319 (18%)
Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER 74
+ E+ +I T N+ + + F ++ I +
Sbjct: 49 RQFIELSDEEWKQI-------PFGQTFAY------DEENEVLKKLF---EDYYLIAEDGD 92
Query: 75 EDPIGDNNHSPLKGIVHRYPDRI--LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E I + LK + Y + + C C +CF VG ++ + E
Sbjct: 93 ETEIYMSFRRILKTVRKPYKGILQYTIFPTSTCNAKCVYCFEENFVG----YTMTKEVQE 148
Query: 133 AALAYIQEKS---QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ YI E ++++ GG+PLI K + + LR V+ + + + +
Sbjct: 149 QVVKYILETKMPGHAIDLLWFGGEPLI-GAKIIDYICSELRK-NGVEF----TSMIVTNA 202
Query: 190 QRINPELIQCLKE----AGKPVYIA----------IHANHPYEFSEEAIAAISRLANAGI 235
+ ++ +K + + + + + +AIAAI R+++ GI
Sbjct: 203 SLLTEDVADRMKNDWNIRQVQITLDGTQEEYDARKCYIDDSRSYFPQAIAAIHRVSDRGI 262
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFV----ELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
+L + L + ++ L + + L + P LH G
Sbjct: 263 PVLIRLNLDRNNAENLRELIDYLEVEFPKKNNLYVYPGLLHQLMREKNAMDMW-----GV 317
Query: 292 K--IVASLK--EKISGLCQ 306
++ + SGL +
Sbjct: 318 HASLMEYARSKGFCSGLMR 336
>gi|330838563|ref|YP_004413143.1| molybdenum cofactor biosynthesis protein A [Selenomonas sputigena
ATCC 35185]
gi|329746327|gb|AEB99683.1| molybdenum cofactor biosynthesis protein A [Selenomonas sputigena
ATCC 35185]
Length = 328
Score = 49.9 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 83/225 (36%), Gaps = 23/225 (10%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVI 148
R + + + + C + CR+C + V +LS ++ + + + I +V
Sbjct: 5 YRRKIEYVRISVTDRCNLRCRYCMPADGVEKLSHADILSFEEIVRVVRALAQ-LGIRKVR 63
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGG+PL+ + + +++ ++ ++ ++ + + ++ +L + L+ AG
Sbjct: 64 LTGGEPLLR--RGVVDLVREIKAVEGIERVALTTNGVLL------ADLAEELRAAGLD-G 114
Query: 209 IAIHANHPYE------------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ I + E + AG+ V LKG+N+ +
Sbjct: 115 VNISLDTLAEDAFYDITRRSASLLSVVRQGMEAALAAGLKTKLNCVPLKGVNEAELVSLA 174
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
+ + ++ L +A + E ++I+ +
Sbjct: 175 ALAKEHPIDVRFIELMPIGMAKEAGLTGVPTAEVRRILEESFGAL 219
>gi|228945768|ref|ZP_04108115.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228813989|gb|EEM60263.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 333
Score = 49.9 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 16 VIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L K++ L ++ ++ + + + Q R+N L +++
Sbjct: 75 LRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDRVF 131
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 132 QKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171
>gi|229091138|ref|ZP_04222361.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-42]
gi|228692269|gb|EEL46005.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-42]
Length = 333
Score = 49.9 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 16 VIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L K++ L ++ ++ + + + Q R+N L +++
Sbjct: 75 LRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDRVF 131
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 132 QKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171
>gi|229184372|ref|ZP_04311579.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BGSC
6E1]
gi|228599168|gb|EEK56781.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BGSC
6E1]
Length = 333
Score = 49.9 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 16 VIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L K++ L ++ ++ + + + Q R+N L +++
Sbjct: 75 LRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDRVF 131
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 132 QKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171
>gi|225011453|ref|ZP_03701891.1| molybdenum cofactor biosynthesis protein A [Flavobacteria bacterium
MS024-2A]
gi|225003956|gb|EEG41928.1| molybdenum cofactor biosynthesis protein A [Flavobacteria bacterium
MS024-2A]
Length = 335
Score = 49.9 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 79/221 (35%), Gaps = 19/221 (8%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C +C +E V L + + +LA + K+ + ++
Sbjct: 13 GRGHNYLRISL---TERCNLRCSYCMPQEGVTLTPKPQLMNAEEIFSLAALFVKNGVNKI 69
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ +L L + VQ L S +D L++ +
Sbjct: 70 RLTGGEPLVRKD--FPDILSRLSQLP-VQ-LSLTSNAFSIDRH---IPLLKDSGVHSINI 122
Query: 208 YIAI-HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A E + ++ I +L G + +VL+KGINDD I
Sbjct: 123 SLDTLQAKRFQEITFRNYFDQVHQNILKLIREGFNVKINAVLMKGINDDEIIDFINFTKD 182
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
+ + D +T E +I+ + + S
Sbjct: 183 YPISFRFIEFMPFDGNKWKRDKTVTFE---EIMKEVHKNFS 220
>gi|218904693|ref|YP_002452527.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
gi|228928618|ref|ZP_04091654.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|218538124|gb|ACK90522.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
gi|228830937|gb|EEM76538.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 338
Score = 49.9 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|118477567|ref|YP_894718.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al
Hakam]
gi|225864114|ref|YP_002749492.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
gi|118416792|gb|ABK85211.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al
Hakam]
gi|225790320|gb|ACO30537.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
Length = 337
Score = 49.9 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L K++ L ++ ++ + + + Q R+N L +++
Sbjct: 79 LRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDRVF 135
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 136 QKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|49481735|ref|YP_036288.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|301053674|ref|YP_003791885.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI]
gi|49333291|gb|AAT63937.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|300375843|gb|ADK04747.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar
anthracis str. CI]
Length = 337
Score = 49.9 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L K++ L ++ ++ + + + Q R+N L +++
Sbjct: 79 LRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDRVF 135
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 136 QKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|52143300|ref|YP_083529.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
gi|51976769|gb|AAU18319.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
Length = 337
Score = 49.9 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L K++ L ++ ++ + + + Q R+N L +++
Sbjct: 79 LRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDRVF 135
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 136 QKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|30262154|ref|NP_844531.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Ames]
gi|47778008|ref|YP_018776.2| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
'Ames Ancestor']
gi|49184996|ref|YP_028248.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Sterne]
gi|167633002|ref|ZP_02391328.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|167638349|ref|ZP_02396626.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0193]
gi|170686396|ref|ZP_02877617.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
gi|170706016|ref|ZP_02896478.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0389]
gi|177650979|ref|ZP_02933876.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0174]
gi|229602502|ref|YP_002866510.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0248]
gi|254684722|ref|ZP_05148582.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
CNEVA-9066]
gi|254720932|ref|ZP_05182723.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A1055]
gi|254737167|ref|ZP_05194871.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Western North America USA6153]
gi|254743647|ref|ZP_05201332.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Kruger B]
gi|254751482|ref|ZP_05203519.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Vollum]
gi|254758355|ref|ZP_05210382.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Australia 94]
gi|30256780|gb|AAP26017.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Ames]
gi|47551713|gb|AAT31251.2| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
'Ames Ancestor']
gi|49178923|gb|AAT54299.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Sterne]
gi|167513650|gb|EDR89019.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0193]
gi|167531814|gb|EDR94479.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|170129018|gb|EDS97883.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0389]
gi|170669472|gb|EDT20214.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
gi|172083440|gb|EDT68501.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0174]
gi|229266910|gb|ACQ48547.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0248]
Length = 337
Score = 49.9 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L K++ L ++ ++ + + + Q R+N L +++
Sbjct: 79 LRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDRVF 135
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 136 QKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|255656429|ref|ZP_05401838.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-23m63]
gi|296450124|ref|ZP_06891885.1| 2-methylthioadenine synthetase [Clostridium difficile NAP08]
gi|296878505|ref|ZP_06902510.1| 2-methylthioadenine synthetase [Clostridium difficile NAP07]
gi|296260887|gb|EFH07721.1| 2-methylthioadenine synthetase [Clostridium difficile NAP08]
gi|296430312|gb|EFH16154.1| 2-methylthioadenine synthetase [Clostridium difficile NAP07]
Length = 432
Score = 49.5 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 15/115 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+D ++ + ++ + EV+ TG
Sbjct: 141 KTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTG 195
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
D L +L V+K + I+ ++ +R S PI+ E+++
Sbjct: 196 IHVASYGKD-LKDRDIKLLDVIKQINKIEKIERIRLSSVEPILFTDEFVNEVLKM 249
>gi|126700065|ref|YP_001088962.1| putative radical SAM superfamily protein [Clostridium difficile
630]
gi|254976042|ref|ZP_05272514.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-66c26]
gi|255093430|ref|ZP_05322908.1| putative radical SAM superfamily protein [Clostridium difficile CIP
107932]
gi|255101608|ref|ZP_05330585.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-63q42]
gi|255307477|ref|ZP_05351648.1| putative radical SAM superfamily protein [Clostridium difficile
ATCC 43255]
gi|255315175|ref|ZP_05356758.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-76w55]
gi|255517844|ref|ZP_05385520.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-97b34]
gi|255650960|ref|ZP_05397862.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-37x79]
gi|260684029|ref|YP_003215314.1| putative radical SAM superfamily protein [Clostridium difficile
CD196]
gi|260687689|ref|YP_003218823.1| putative radical SAM superfamily protein [Clostridium difficile
R20291]
gi|306520839|ref|ZP_07407186.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-32g58]
gi|115251502|emb|CAJ69335.1| putative MiaB-like tRNA modifying enzyme [Clostridium difficile]
gi|260210192|emb|CBA64398.1| putative radical SAM superfamily protein [Clostridium difficile
CD196]
gi|260213706|emb|CBE05587.1| putative radical SAM superfamily protein [Clostridium difficile
R20291]
Length = 432
Score = 49.5 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 15/115 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+D ++ + ++ + EV+ TG
Sbjct: 141 KTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTG 195
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
D L +L V+K + I+ ++ +R S PI+ E+++
Sbjct: 196 IHVASYGKD-LKDRDIKLLDVIKQINQIEKIERIRLSSVEPILFTDEFVNEVLKM 249
>gi|229174229|ref|ZP_04301763.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3]
gi|228609247|gb|EEK66535.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3]
Length = 338
Score = 49.5 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|229196388|ref|ZP_04323136.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
gi|228587242|gb|EEK45312.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
Length = 333
Score = 49.5 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E I ++ TGG+PL
Sbjct: 16 VIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GINKIRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L K++ L ++ ++ + + + Q R+N L +++
Sbjct: 75 LRKD--LPKLIGRLAKLEGLKDIGLTTNGIHLAKQATALKEAGLKRVNISL-DAIEDCVF 131
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 132 QKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171
>gi|196015044|ref|XP_002117380.1| hypothetical protein TRIADDRAFT_61388 [Trichoplax adhaerens]
gi|190580133|gb|EDV20219.1| hypothetical protein TRIADDRAFT_61388 [Trichoplax adhaerens]
Length = 590
Score = 49.5 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 87/253 (34%), Gaps = 25/253 (9%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E VG L + D L+ + + ++
Sbjct: 53 GRKHDYLRISL---TERCNLRCQYCMPSEGVGLTPQERLLTADEIIKLSQLFASEGVTKI 109
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ L +++ + I + ++ + + R P+L + + V
Sbjct: 110 RLTGGEPLVRRD--LIDIVREINLIPGIDVIAMTTNGVTL--ARHLPKLKEA-GLSLINV 164
Query: 208 YIAIHANHPYEF------SEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRT 260
+ +EF + + I G + V++KG+NDD + +
Sbjct: 165 SLDTLVPAKFEFITRRRGWDRVMKGIDAALQLGYNPVKINCVVMKGLNDDEILDFVQLTE 224
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL--DLPGGYG 318
+ ++ D ++ ++ I+ P + D P
Sbjct: 225 TKAVDVRFIEYMPFDGNKWNYEKFVSYQQMLDIIRDRW--------PELVRMQDSPNDTS 276
Query: 319 KVKIDTHNIKKVG 331
K +I ++G
Sbjct: 277 KAYQVPGHIGRIG 289
>gi|328871501|gb|EGG19871.1| molybdenum cofactor synthesis 1 [Dictyostelium fasciculatum]
Length = 431
Score = 49.5 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q + Q +E D + G H Y L C + C++C E
Sbjct: 78 LQLLKQLKEKQSSSSTMILNKKDELLTDTFGRKHTYLRISL---TERCNLRCQYCMPEEG 134
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V Q + + L+ + + + ++ FTGG+PL+ + ++ +++ + IK ++
Sbjct: 135 VQLQPSENIMTDQEIIKLSRLFVSAGVTKIRFTGGEPLVRKN--IESMIEEIGKIKGLET 192
Query: 178 LRFHSRVPIV 187
+ + +
Sbjct: 193 IAMTTNAIAL 202
>gi|291297888|ref|YP_003509166.1| molybdenum cofactor biosynthesis protein A [Stackebrandtia
nassauensis DSM 44728]
gi|290567108|gb|ADD40073.1| molybdenum cofactor biosynthesis protein A [Stackebrandtia
nassauensis DSM 44728]
Length = 341
Score = 49.5 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/222 (16%), Positives = 85/222 (38%), Gaps = 20/222 (9%)
Query: 89 IVHRYPDRIL---LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQI 144
+V RY + + L C + C +C E + + +L+ + + + +
Sbjct: 15 LVDRYGRTAVDLRVSLTDRCNLRCTYCMPAEGLAWLPRQEILTDDEIVRLVGLAVTRLGV 74
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+V FTGG+PL+ L ++ ++ + + + +R+ P L +
Sbjct: 75 TQVRFTGGEPLLRPA--LADIVARTTALEPRPRVSLTTNAIGL--KRMAPALREA-GLDR 129
Query: 205 KPVYIAI-------HANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILAN 256
+ + H ++ + AG + + SVL++G+N+D +
Sbjct: 130 VNISLDTLDPARFKTLAHRDRLNDTVEGIAAA-KAAGLVPVKVNSVLMRGVNEDEAV--P 186
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
L+R +E + ++ L A R + ++I+ L+
Sbjct: 187 LLRFALEHGYELRFIEQMPLDAQHGWSRENMVTAEEILTQLR 228
>gi|225166845|ref|YP_002650830.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
botulinum]
gi|253771364|ref|YP_003034203.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum D
str. 1873]
gi|225007509|dbj|BAH29605.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
botulinum]
gi|253721341|gb|ACT33634.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum D
str. 1873]
Length = 320
Score = 49.5 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 27/190 (14%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQ 143
++ Y R+ L C + C +C +E ++ + E + +++
Sbjct: 1 MLDSYGRRVEYLRISLTEKCNLKCIYCMPKESYLEERHCTKKISN-EEIIKFLKASVNLG 59
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RIN 193
I +V +TGG+PLI+ + K++ I + + + ++ R+N
Sbjct: 60 IKKVRYTGGEPLIVKD--IDKLIYDTGKIPEINDISITTNGILLYDMVEELKNSGLKRVN 117
Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD-P 251
L ++ K + N + I + + G+ L VLLKGINDD
Sbjct: 118 ISLDTLKEDRFKKITRNGDIN-------KVFQGIDKCLSLGMTPLKINVVLLKGINDDEI 170
Query: 252 EILANLMRTF 261
NL +
Sbjct: 171 GDFINLTKKL 180
>gi|85860740|ref|YP_462942.1| molybdenum cofactor biosynthesis protein A [Syntrophus
aciditrophicus SB]
gi|85723831|gb|ABC78774.1| molybdenum cofactor biosynthesis protein A [Syntrophus
aciditrophicus SB]
Length = 345
Score = 49.5 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 64/163 (39%), Gaps = 23/163 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C + CR+C E + S+ VLS + + + + I +V TGG+PL+
Sbjct: 35 VTDRCNLRCRYCMPEEGIESKLGHEGVLSLEAFARVVR-LAAQVGIRKVRLTGGEPLVRR 93
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+ + ++++ + + + + + + P + + LK AG + I + E
Sbjct: 94 N--IPQLIRYIADVPQIDDIALTTNGILFAP------MAEELKAAGLN-RVNISLDSFKE 144
Query: 219 -----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ A L + +V+++G NDD
Sbjct: 145 DRFRFITRVGNLDQAKKAIFKALELKMNPVKINTVVIRGFNDD 187
>gi|320104529|ref|YP_004180120.1| GTP cyclohydrolase subunit MoaA [Isosphaera pallida ATCC 43644]
gi|319751811|gb|ADV63571.1| GTP cyclohydrolase subunit MoaA [Isosphaera pallida ATCC 43644]
Length = 341
Score = 49.5 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C + + +LS ++ E + + I ++ TGG+PL+
Sbjct: 31 VTDRCNIRCVYCMPETVQFLPRAEILSFEEIERVVR-VAVGLGINKLRLTGGEPLVRRD- 88
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
L K++ L I +Q + + ++ P
Sbjct: 89 -LTKLVARLTAIPGIQDVGLTTNGLLLGP 116
>gi|302530570|ref|ZP_07282912.1| molybdenum cofactor biosynthesis protein A [Streptomyces sp. AA4]
gi|302439465|gb|EFL11281.1| molybdenum cofactor biosynthesis protein A [Streptomyces sp. AA4]
Length = 354
Score = 49.5 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 83/232 (35%), Gaps = 36/232 (15%)
Query: 86 LKGIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEK 141
G+V + + L C + C +C E + VLS + + E
Sbjct: 25 HPGLVDSFGRVATDLRVSLTDRCNLRCTYCMPAEGLDWMPSEQVLSDDELVRLMRIAVEM 84
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QR 191
+ ++ TGG+PL+ L+ +++ + ++ + + + R
Sbjct: 85 LGVTDIRLTGGEPLLRP--GLEHIVERITALEPRPRVSMTTNGIGLAKRAPGLVAAGLDR 142
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLK 245
IN L +E E + +A ++ +AG+ + SVL++
Sbjct: 143 INVSLDTIDRERF------------AELTRRDRLPHVLAGLAAARDAGLSPVKINSVLMR 190
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
G N+ + L+R +E ++ L A R + ++I+A L
Sbjct: 191 GYNEHEAV--PLLRFCLEEGYHLRFIEQMPLDAQHGWNRRDMITAEEILAML 240
>gi|256752725|ref|ZP_05493574.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
ethanolicus CCSD1]
gi|256748400|gb|EEU61455.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
ethanolicus CCSD1]
Length = 317
Score = 49.5 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +L +++ + I + I +V FTGG+PL+
Sbjct: 16 VTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
K ++ ++ IK ++ + + ++ E+ LKEAG
Sbjct: 73 KGIENIIYETSKIKGIEDIALTTNGTMLY------EMADTLKEAGLK 113
>gi|78044427|ref|YP_360054.1| radical SAM domain-containing protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996542|gb|ABB15441.1| radical SAM domain protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 331
Score = 49.5 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 78/220 (35%), Gaps = 48/220 (21%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G++ LS+++ +A + I + + +IF+GG+PL+
Sbjct: 3 VSWNTTNQCNLYCEHCYRDA--GAKVEEELSTEEGKALIDEIVK-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ L + L+ F + + I E+ Q LK+AG + + I
Sbjct: 60 RED------ILELVDYASQKGLKPVFGTNGTL-----ITLEMAQKLKKAG-ALAMGISL- 106
Query: 215 HPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
E A+ + AG+ + + + + + + L
Sbjct: 107 --DSVDPEKHDRFRASPGSWEKAVEGMKNCKAAGLPFQIHTTV---VEWNYDEVEQLTDF 161
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
VE+ +++ F + I L+
Sbjct: 162 AVEIGAIAHHIF----------FLVPTGRAVNIEQESLRA 191
>gi|206975468|ref|ZP_03236381.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|222097023|ref|YP_002531080.1| molybdenum cofactor biosynthesis protein a [Bacillus cereus Q1]
gi|206746370|gb|EDZ57764.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|221241081|gb|ACM13791.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus Q1]
Length = 338
Score = 49.5 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|193214591|ref|YP_001995790.1| molybdenum cofactor biosynthesis protein A [Chloroherpeton
thalassium ATCC 35110]
gi|193088068|gb|ACF13343.1| molybdenum cofactor biosynthesis protein A [Chloroherpeton
thalassium ATCC 35110]
Length = 371
Score = 49.5 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 90/292 (30%), Gaps = 62/292 (21%)
Query: 81 NNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALA 136
+ + R+ R+ + C C +C + + +LS+K+ +
Sbjct: 38 HKMMQQNLLADRFGRRVNYLRVAVTDRCNFRCVYCMPEKGIRFKPATALLSAKEILRVIG 97
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
+ + +V FTGG+PL+ L ++L + ++ L + ++
Sbjct: 98 -LAGSLGVEKVRFTGGEPLLRED--LPEILSEAAALPGIRSLHLTTNGLLLGKY------ 148
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL----------------ANAGII-LLS 239
+ LK++G ++ +AGI +
Sbjct: 149 LPALKKSGIHGVNI-------SLDALQRERFRKITRRDAFQTVWENILQTLDAGIPEVKI 201
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLH---HPDLAAGTSHFRLTIEEGQKIVAS 296
V L +++ + + ++ ++ L H + T+ F + + +++
Sbjct: 202 NVVALADLSESELVQFVALTQSHKVTVRFIELMPFNHETESWRTNAF-TSAKRVLRLLNE 260
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SGL + ++ + I DH V P
Sbjct: 261 ---HFSGL---------------IPLEGS---ATEQQCFAIRDHRGKVAIIP 291
>gi|310643276|ref|YP_003948034.1| gtp cyclohydrolase subunit moaa [Paenibacillus polymyxa SC2]
gi|309248226|gb|ADO57793.1| GTP cyclohydrolase subunit MoaA [Paenibacillus polymyxa SC2]
Length = 338
Score = 49.1 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 28/170 (16%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143
++ R + + + C C +C +E+ G K LS ++
Sbjct: 9 LLRRPIRDLRISVTDRCNFRCSYCMPKEIFGDDFAFLPKSECLSFEEIHRLTELFVG-LG 67
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI----------------- 186
+ ++ TGG+PL+ + L ++ + I V+ + + +
Sbjct: 68 VKKIRLTGGEPLMRPN--LPDLVSRILSINGVEDMGLTTNGLLLGQQAQRLYDAGLRRLN 125
Query: 187 VDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
V +NPEL + G KP +I + E E ++ + G+
Sbjct: 126 VSVDALNPELFGRMNGRGIKPAFILKQIDCAREIGFEIK--VNMVVQKGV 173
>gi|168210846|ref|ZP_02636471.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
B str. ATCC 3626]
gi|170711112|gb|EDT23294.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
B str. ATCC 3626]
Length = 331
Score = 49.1 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 91/245 (37%), Gaps = 25/245 (10%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I L C + C +C ++ +++ + + I +V
Sbjct: 12 KYGREIDYLRISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKV 70
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ + + ++K + I ++ + + I+ ++ LK +
Sbjct: 71 RLTGGEPLVR--EGVVDLIKNINKIPEIEEICLTTNG-ILLGDKVKELSENGLK--RVNI 125
Query: 208 YIAI-HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + E + ++ + +I + + + +++L+ N D + +L+
Sbjct: 126 SLDTLKEDRFKEITRIGTLDKVLYSIEKCLENNVKVKINTIILEDFNKD--EILDLINLA 183
Query: 262 VELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPG 315
+ I ++ F+ +T E +I+ K+ +S L P + + G
Sbjct: 184 YKNPIDLRFIELM-PIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEG 242
Query: 316 GYGKV 320
GK+
Sbjct: 243 FKGKI 247
>gi|110798850|ref|YP_696474.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
ATCC 13124]
gi|123148649|sp|Q0TPG6|MOAA_CLOP1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|110673497|gb|ABG82484.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
ATCC 13124]
Length = 323
Score = 49.1 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 91/245 (37%), Gaps = 25/245 (10%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I L C + C +C ++ +++ + + I +V
Sbjct: 4 KYGREIDYLRISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKV 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ + + ++K + I ++ + + I+ ++ LK +
Sbjct: 63 RLTGGEPLVR--EGVVDLIKNINKIPEIEEICLTTNG-ILLGDKVKELSENGLK--RVNI 117
Query: 208 YIAI-HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + E + ++ + +I + + + +++L+ N D + +L+
Sbjct: 118 SLDTLKEDRFKEITRIGTLDKVLYSIEKCLENNVKVKINTIILEDFNKD--EILDLINLA 175
Query: 262 VELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPG 315
+ I ++ F+ +T E +I+ K+ +S L P + + G
Sbjct: 176 YKNPIDLRFIELM-PIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEG 234
Query: 316 GYGKV 320
GK+
Sbjct: 235 FKGKI 239
>gi|308070036|ref|YP_003871641.1| molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa
E681]
gi|305859315|gb|ADM71103.1| Molybdenum cofactor biosynthesis protein A (narA protein)
[Paenibacillus polymyxa E681]
Length = 337
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C CR+C E+ G K +L+ ++ I + ++ TGG+PL
Sbjct: 20 VIDRCNFRCRYCMPEEIFGHDYPFLPKEKILTFEEITRLSR-IFVSLGVTKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L ++ +L + V+ + + P+ L+EAG
Sbjct: 79 LRKD--LSLLIHSLTQLDGVEDIAMTTNGV------FLPKYAVALREAGLKRVTVSLDSL 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N + + I A AG+ + V+ KG ND
Sbjct: 131 DDDRFRQMNGGRSSVKAVLDGIEAAAQAGMQVKINMVVQKGFNDQ 175
>gi|255318717|ref|ZP_05359944.1| molybdenum cofactor biosynthesis protein A [Acinetobacter
radioresistens SK82]
gi|262378102|ref|ZP_06071259.1| molybdenum cofactor biosynthesis protein A [Acinetobacter
radioresistens SH164]
gi|255304215|gb|EET83405.1| molybdenum cofactor biosynthesis protein A [Acinetobacter
radioresistens SK82]
gi|262299387|gb|EEY87299.1| molybdenum cofactor biosynthesis protein A [Acinetobacter
radioresistens SH164]
Length = 347
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 17/201 (8%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R ++ + + C C +C +K +LS ++ ++ I + TG
Sbjct: 16 RSKRKLRISVTDRCNFKCVYCMPEHPEWMKKQDLLSFEELYQFCDFMVRH-GIEAIRITG 74
Query: 152 GDPLIL-SHKRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKE-A 203
G+PL+ + L+ LR + ++ + + + Q +L L
Sbjct: 75 GEPLMRQGVVHFVEQLQALRKLG-LKRISMTTNGHYLKQYADNLKQAGLDDLNISLDSLN 133
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
K + + + I + AG+ + VL+ GIND + +
Sbjct: 134 NKQFKQLTQ----KDLTP-VLEGIQAVKAAGLPIKINCVLMNGINDHQILPLARWSVQQK 188
Query: 264 LRIKPYYLH--HPDLAAGTSH 282
+ ++ D T H
Sbjct: 189 IMLRFIEFMPLDGDRKWSTEH 209
>gi|217960969|ref|YP_002339537.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
gi|217063865|gb|ACJ78115.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
Length = 338
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKIDGVEDIGLTTNGS 106
>gi|289661642|ref|ZP_06483223.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. vasculorum NCPPB702]
Length = 343
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 51/156 (32%), Gaps = 24/156 (15%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 29 VIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS-VGVTKVRLTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RIN-------PELIQC 199
L ++ L I+ ++ L + ++ Q RI P L +
Sbjct: 88 RRD--LPSLIARLSAIEGIEDLALTTNGTLLARQAVALRQAGLRRITVSMDALEPALFRR 145
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
+ + + E + I+ + GI
Sbjct: 146 MSGDRGEIAQVLAGIAAAELAGFQRLKINCVVQRGI 181
>gi|15615089|ref|NP_243392.1| molybdenum cofactor biosynthesis protein A [Bacillus halodurans
C-125]
gi|24212015|sp|Q9K9W9|MOAA_BACHD RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|10175146|dbj|BAB06245.1| molybdopterin cofactor biosynthesis [Bacillus halodurans C-125]
Length = 338
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 64/165 (38%), Gaps = 23/165 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C ++ G K +LS ++T + + S I ++ TGG+PL
Sbjct: 21 VTDRCNFRCHYCMPADIFGPDYPFLKKTEILSFEETNRLVHLFHQTSPIKKIRITGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + +++ L ++ + + ++ P++ LK+AG +
Sbjct: 81 MRKD--VDQLISMLTATTGIEDVAMTTNGTLL------PKMADKLKKAGLKRVTVSLDSL 132
Query: 216 PYEF----------SEEAIAAISRLANAGIILLSQSVLLKGINDD 250
E ++ + + AG+ + V+ KG+ND
Sbjct: 133 EDEQFGKINGRGIGTKPVLDGMEAAKEAGLGVKVNMVVQKGVNDQ 177
>gi|138894331|ref|YP_001124784.1| molybdenum cofactor biosynthesis protein A [Geobacillus
thermodenitrificans NG80-2]
gi|196248059|ref|ZP_03146761.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
G11MC16]
gi|134265844|gb|ABO66039.1| Molybdenum cofactor biosynthesis protein A [Geobacillus
thermodenitrificans NG80-2]
gi|196212843|gb|EDY07600.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
G11MC16]
Length = 341
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 12/162 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +G +L+ ++ A L+ + + ++ TGG+PL
Sbjct: 24 VIDQCNFRCIYCMPAEVFGPNFRFLAEGELLTVEEM-ALLSECFVELGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP--IVDPQRINPELIQCLKEAGKPV--YIAI 211
+ L ++ L I ++ + + + QR+ ++ + + + I
Sbjct: 83 LRRD--LDALVARLSAIPGLRDIGLTTNGVHLVKWAQRLKEAGLKRVNVSLDALDDDIFR 140
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
N + I AG+ + V+ KG ND +
Sbjct: 141 KMNGIGVGVAPVLKGIEAARAAGLGVKVNMVVKKGWNDSQIV 182
>gi|302325942|gb|ADL25143.1| radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 336
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 69/229 (30%), Gaps = 44/229 (19%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y + + C + C+ C++ G K L++ + + I + + +IF+GG
Sbjct: 5 YGMIVSWMTTNKCNLTCKHCYQDA--GENKSAELTTDEALKLIDEIAK-AGFKIMIFSGG 61
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+P+ + L + LR F + + I +L LKEAG
Sbjct: 62 EPMTRPD------IVELVAHARERGLRPVFGTNGTL-----ITHDLAFMLKEAG----AM 106
Query: 211 IHANHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ I AG+ + ++ ++ +
Sbjct: 107 AMGISVDSIDPARHNDFRGLPNAFELTLMGIENCKAAGLPFQIHTTIMDWNQNEIFDI-- 164
Query: 257 LMRTFVELRIKPYYLHHPDLAAG-----TSHFRLTIEEGQ--KIVASLK 298
M E+ + + R+ EG KI+ +
Sbjct: 165 -MDWVKEIGAVNHQIFFLIPVGRGKEIEGHALRVAEYEGLLRKIMEKSR 212
>gi|255658518|ref|ZP_05403927.1| radical SAM domain protein [Mitsuokella multacida DSM 20544]
gi|260849318|gb|EEX69325.1| radical SAM domain protein [Mitsuokella multacida DSM 20544]
Length = 332
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 46/219 (21%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C +YC C+R G + L++++ + L+ I + + +IF+GG+PL+
Sbjct: 4 ISWNTTNACNMYCAHCYRDA--GCRAEEELNTEEGKKLLSEIAK-AGFKIMIFSGGEPLM 60
Query: 157 LSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
L K L I F + + I ++ + LKEAG
Sbjct: 61 RPDILELVKYASDLHMIP-----VFGTNGTL-----ITLDMAKKLKEAGARAMGI----S 106
Query: 216 PYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A+ + A G+ + ++ + E + +
Sbjct: 107 LDSLDPKKHDKFRSFPGGWEGAVQGMKNCAAVGLPFQIHTTVMDWNQSELEAMTDFA--- 163
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
VE+ K ++ F + + I L+
Sbjct: 164 VEIGAKAHHFF----------FLVPTGRAKTIEEESLRA 192
>gi|294501748|ref|YP_003565448.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium QM
B1551]
gi|294351685|gb|ADE72014.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium QM
B1551]
Length = 338
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G+ +LS + E + + +V TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGADYPFLPAENILSFDELERLTR-LFALLGVKKVRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ K L ++ L+ I+ + + +
Sbjct: 79 LR--KGLPDLINRLKQIEGIDDIAITTNGS 106
>gi|229161145|ref|ZP_04289132.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
R309803]
gi|228622241|gb|EEK79080.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
R309803]
Length = 337
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 64/162 (39%), Gaps = 18/162 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G+ + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGTDYAFLQEECLLTFDEIERLARLFISM-GVEKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L K++ L ++ ++ + + + Q +L++ + + +H
Sbjct: 79 LRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ---AKLLKEAGLKRVNISLDAIEDH 133
Query: 216 PYE-------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ ++ + I AG+ + V+ KG+ND
Sbjct: 134 VFQKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175
>gi|292670532|ref|ZP_06603958.1| molybdenum cofactor biosynthesis protein A [Selenomonas noxia ATCC
43541]
gi|292647821|gb|EFF65793.1| molybdenum cofactor biosynthesis protein A [Selenomonas noxia ATCC
43541]
Length = 331
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C V VLS ++ + + E + +V TGG+PL+
Sbjct: 16 VTDCCNLRCRYCMPAHGVKKLAHADVLSYEEILRNVRALAEM-GVRKVRLTGGEPLVRRD 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP---IVDPQRINPEL 196
+ ++++ L+ ++ + + + + I+ L
Sbjct: 75 --ITRLVRGLKETPGIETVAVTTNGVLLGTMLDELIDAGL 112
>gi|108756838|ref|YP_631100.1| radical SAM domain-containing protein [Myxococcus xanthus DK 1622]
gi|108460718|gb|ABF85903.1| radical SAM domain protein [Myxococcus xanthus DK 1622]
Length = 294
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 54/140 (38%), Gaps = 16/140 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTG-GDPLILS 158
L C C +C + + + D E +A+++ ++Q V FT G+ LI
Sbjct: 10 PLSSCNYGCEYCPFGKWKHTDEELAKDRADLERFVAWVEARTQDTVSVFFTPWGEALIWP 69
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+ + L L ++ HV+ L + + + + ++ ++ H E
Sbjct: 70 WYQ--EALARLSHLPHVERLAIQTNLSCKL------DWVAGVRADKLGIWATYH----PE 117
Query: 219 FSEEAI--AAISRLANAGII 236
+++ A ++L G+
Sbjct: 118 WTKRHRFVAQCAKLTELGVR 137
>gi|303326380|ref|ZP_07356823.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302864296|gb|EFL87227.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 391
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 70/209 (33%), Gaps = 30/209 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ ++ C + C+ C G LS+ + +A + + +IFTGGDP++
Sbjct: 48 VAWEVTRSCNLACKHCRAEAHPEPYPGE-LSTDEAKALIDTFPQVGNPI-IIFTGGDPMM 105
Query: 157 LSHKRLQKVLKTLRYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
+ L H + F + I PE + +KEAG
Sbjct: 106 RPD------VYELVAYTHAKGLTCAFSPNGTL-----ITPESARRIKEAGVERCSISIDG 154
Query: 212 --HANH------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
A+H P F E+++ I L + G+ + + + + + L
Sbjct: 155 ADAASHDAFRGVPGAF-EDSMRGIGYLKDVGVPFQINTTVTRNNLSSFKKIFELCE---R 210
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
+ +++ S + Q+
Sbjct: 211 IGAAAWHIFLLVPMGRASGLADQVITAQE 239
>gi|260460192|ref|ZP_05808444.1| Radical SAM domain protein [Mesorhizobium opportunistum WSM2075]
gi|259033837|gb|EEW35096.1| Radical SAM domain protein [Mesorhizobium opportunistum WSM2075]
Length = 382
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--------SQIWE 146
D +LLK+ C + C +C+ +G + + ++A + + ++ + +
Sbjct: 12 DTVLLKVASRCNLDCSYCY-IYHMGDEAWRSQPKQMSDAVIQMVAQRLSDQLALQAVPFS 70
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQ 198
V+ GG+PL+L RL+ TLR + H + + + RI L++
Sbjct: 71 VVLHGGEPLLLGATRLEHFCATLRGVLPHPCGIHIQTNG-ALISDRIIDVLVR 122
>gi|313633909|gb|EFS00625.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri FSL
N1-067]
Length = 335
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 23/192 (11%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + I K I +
Sbjct: 11 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFME-IMVKFGIKK 66
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V TGG+PL+ + + ++++ L I ++ + + + + + LKEAG
Sbjct: 67 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAKK------AEALKEAGLT 118
Query: 207 VYIAI----HANHPYEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDPEILAN 256
HA+ + ++ + I + G + VL+KG NDD
Sbjct: 119 RVNISLDSLHADRFQTITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDXX 178
Query: 257 LMRTFVELRIKP 268
++ I+
Sbjct: 179 QFTKDKDINIRF 190
>gi|239625860|ref|ZP_04668891.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520090|gb|EEQ59956.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 353
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C + + +LS ++ E A+A I + TGG+PL+
Sbjct: 16 ITDRCNLRCRYCMPNGVESLARSEILSLEEIE-AIAICAASLGISRIKVTGGEPLVRRDC 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+++K L+ I ++ + + V R LI+
Sbjct: 75 C--QLVKLLKSIPGIEKVTITTNG--VLLDRYLEPLIEA 109
>gi|86604900|ref|YP_473663.1| molybdenum cofactor biosynthesis protein A [Synechococcus sp.
JA-3-3Ab]
gi|86553442|gb|ABC98400.1| molybdenum cofactor biosynthesis protein A [Synechococcus sp.
JA-3-3Ab]
Length = 312
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 62/160 (38%), Gaps = 21/160 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C + CR+C K + L+ + + + + I EV TGG+PL+
Sbjct: 18 LTDQCNLRCRYCMPLHPEFLDKSSYLTPQQYKEIIGEL-LDYGIEEVRITGGEPLVRQD- 75
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+V++ L +K + L + R L +A + + + + +
Sbjct: 76 -FDEVIQELAKLK-IPSLSLTTNGL--LLHRYWDVL-----KAANVLNLNVSLDSLQPST 126
Query: 221 EEAIAAISRLAN----------AGIILLSQSVLLKGINDD 250
+ AIA LA+ G L +V+++GIND
Sbjct: 127 QAAIARRDCLADILRNIQEGIARGFSLKVNTVVMRGINDC 166
>gi|295394945|ref|ZP_06805158.1| molybdenum cofactor biosynthesis protein A [Brevibacterium
mcbrellneri ATCC 49030]
gi|294972278|gb|EFG48140.1| molybdenum cofactor biosynthesis protein A [Brevibacterium
mcbrellneri ATCC 49030]
Length = 380
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 77/218 (35%), Gaps = 27/218 (12%)
Query: 101 LLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L +C + C +C M K VL++ + + + + E+ TGG+PL+
Sbjct: 54 LTDLCNLRCTYCMPASGMTFLPKEAVLTAAEVVRLVRVAVDVLGVRELRLTGGEPLLRRD 113
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP-----------------QRINPELIQCLKE 202
L+ ++ ++R + + ++ ++P L
Sbjct: 114 --LEHIVASIRGNHPDLPIAMTTNAISLEKHLPTLHQAGLNRINVSLDTVDPATFAQLSR 171
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
K + N ++ + G+ + SVL++G+ND + +L + +
Sbjct: 172 RTKFSEVMDGLNAALRLRDQTAGDSAPF---GVKI--NSVLMRGVNDHQAV--DLAQFGI 224
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+ I ++ L A R + I L+++
Sbjct: 225 DHGITVRFIEQMPLDADHGWTRQNMVTAHDIATQLQQR 262
>gi|296125375|ref|YP_003632627.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563]
gi|296017191|gb|ADG70428.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563]
Length = 265
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E ++ +L+ + + + + I +V TGG+PL+ +
Sbjct: 16 VTDRCNLRCVYCMPEEGIIKKSHNEILTFEQIYSIVKE-ASELGIKKVRITGGEPLVRKN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+++++ +R I+ V+I+ + ++
Sbjct: 75 --IEELVSMIRSIEKVEIIAMTTNAVLLYS 102
>gi|116872442|ref|YP_849223.1| molybdenum cofactor biosynthesis protein A [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|123466165|sp|A0AHG0|MOAA_LISW6 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|116741320|emb|CAK20442.1| molybdenum cofactor biosynthesis protein A [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 333
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 23/192 (11%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + + I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVQFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V TGG+PL+ + + ++++ L I ++ + + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAKK------AEALKEAGLT 116
Query: 207 VYIAI----HANHPYEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDPEILAN 256
HA+ + ++ + I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDFL 176
Query: 257 LMRTFVELRIKP 268
++ I+
Sbjct: 177 KFTKDKDINIRF 188
>gi|332702939|ref|ZP_08423027.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio africanus
str. Walvis Bay]
gi|332553088|gb|EGJ50132.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio africanus
str. Walvis Bay]
Length = 345
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 61/156 (39%), Gaps = 12/156 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +CF +++ ++L ++ + + ++ I +V TGG+P +
Sbjct: 28 VTDRCNLRCAYCFSKDIRFIDHQSILRYEELLTIVD-LAKELGIRKVRLTGGEPFVRKDF 86
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPI------VDPQRINPELIQCLKEAGKPVYIAIHAN 214
+++ + LR + + + L L ++ I
Sbjct: 87 L--WLVEHILARHPELDLRITTNATLLAGKVRTLKELGVTHLNVSLDTLDPRKFVDITG- 143
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+F + +A+ + GI L +V ++G+NDD
Sbjct: 144 --RDFFRQVRSALDEVMAEGIKLKVNAVAMRGVNDD 177
>gi|312112039|ref|YP_003990355.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
Y4.1MC1]
gi|311217140|gb|ADP75744.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
Y4.1MC1]
Length = 340
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 77/209 (36%), Gaps = 17/209 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G + +L+ ++ E + ++ TGG+PL
Sbjct: 23 VTDQCNFRCVYCMPAEIFGPNFRFLREDELLTIEEMTLLAESFAE-LGVEKIRITGGEPL 81
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP--IVDPQRINPELIQCLKEAGKPV--YIAI 211
+ L ++ L I ++ + + + +R+ ++ + + + I
Sbjct: 82 LRRD--LDVFIERLVRIPGIRDIGLTTNGIHLVKWAKRLKEAGLKRVNVSLDALDDDIFK 139
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
N + + I AG+ + V+ KG+ND I + F E I ++
Sbjct: 140 KMNGVGVGVKPVLKGIEAAVEAGLGVKVNMVVKKGMNDSQII--PMASYFKEQGITLRFI 197
Query: 272 HHPDL-AAGTSHFR--LTIEEGQKIVASL 297
D+ F +T ++ +++ L
Sbjct: 198 EFMDVGTTNGWDFSHVVTKKDMYELLQQL 226
>gi|167630039|ref|YP_001680538.1| radical sam [Heliobacterium modesticaldum Ice1]
gi|167592779|gb|ABZ84527.1| radical sam [Heliobacterium modesticaldum Ice1]
Length = 331
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 75/213 (35%), Gaps = 41/213 (19%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C ++C C+R V + + L++++ + L I + + +IF+GG+PL+
Sbjct: 3 ISWNTTNQCNMFCDHCYRDAGVKADQE--LNTQEGKQLLDEIAK-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ L + LR F + + I EL + LK+AG + + I +
Sbjct: 60 RPD------IVELVAYATSKGLRSVFGTNGTL-----ITRELARDLKKAG-AMGMGISLD 107
Query: 215 HPYE-----------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+ +EA+ + G+ + ++ + + + VE
Sbjct: 108 SLDKKKHDDFRRYPGAWDEAVRGMENCREEGLPFQIHTTVMDWNRHEVHKITDFA---VE 164
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ ++ F + I
Sbjct: 165 IGAVGHHTF----------FLVPTGRAVSIEEE 187
>gi|297538387|ref|YP_003674156.1| coenzyme PQQ biosynthesis protein E [Methylotenera sp. 301]
gi|297257734|gb|ADI29579.1| coenzyme PQQ biosynthesis protein E [Methylotenera sp. 301]
Length = 409
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 82/260 (31%), Gaps = 44/260 (16%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
N+ I P +L ++ + CP++C FC+ L+++ AL ++
Sbjct: 20 QNNGVAANITQTQPLWLLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARK 79
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I + +GG+PL+ ++ + +R I L
Sbjct: 80 MGAIQ-LGISGGEPLLRDD---------------IEDIVIEARKLGYYSNLITSG--VGL 121
Query: 201 KEAGKPVYIAIHANHPY----EFSEEA-------------IAAISRLANAGIILLSQSVL 243
E + +H + +EE + + N G ++ V+
Sbjct: 122 TEKRIQAFKEGGLDHIQLSMHDITEEINNFITNTKTFELKKKVAAMIKNHGYPMVLNVVI 181
Query: 244 LKGINDDPEILANLMRTF----VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
+ + + + VEL YY + + I+E ++I +E
Sbjct: 182 HRYNIGHIKEILEMAEALGADYVELANTQYYGWSLVNRSQLMPLKEQIDEAERITNEFRE 241
Query: 300 KISG-----LCQPFYILDLP 314
K+ P Y D P
Sbjct: 242 KVGNKMKIFFVVPDYFGDRP 261
>gi|262039459|ref|ZP_06012763.1| protein YqeV [Leptotrichia goodfellowii F0264]
gi|261746526|gb|EEY34061.1| protein YqeV [Leptotrichia goodfellowii F0264]
Length = 453
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 69/183 (37%), Gaps = 22/183 (12%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ +S K + R R +K+ C +C +C G + +++ + Y+
Sbjct: 143 EKEYSSNKYTILREKARAFVKIQDGCSKFCSYCKIPYARGLSRSR--ATEHVLEEINYLG 200
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQ--------KVLKTLRYIKHVQILRFHSRVPIVDPQR 191
E+ EV+ TG + +S L +L+ + +K V+ +R S V P
Sbjct: 201 EQGY-KEVVLTG---INMSEYGLDLEPKTDFDTLLEKILAVKSVERVRVSS----VYPDT 252
Query: 192 INPELIQCLKEAGKPVYIAIHAN-HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
I + + LK K + H + ++ + + R A ++ + + + + +
Sbjct: 253 ITDKFLGMLKNNPK---LMPHLHVSVQTLDDKILRLMRRNYKAEFVVNTLEKVKREVPEV 309
Query: 251 PEI 253
Sbjct: 310 ALT 312
>gi|115374433|ref|ZP_01461715.1| radical SAM:Molybdenum cofactor synthesis C-terminal [Stigmatella
aurantiaca DW4/3-1]
gi|115368525|gb|EAU67478.1| radical SAM:Molybdenum cofactor synthesis C-terminal [Stigmatella
aurantiaca DW4/3-1]
Length = 362
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 18/134 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C G + +LS+ + E ++ I V TGG+PLI
Sbjct: 34 VTDRCNFRCTYCSPASWGGKKD--LLSALEFERIVSVFASM-GIQRVRLTGGEPLIRPD- 89
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+ ++ + L + V+ + + + L L+EAG N
Sbjct: 90 -ILEIAQRLSALPGVERVAITTNASHL------ERLAVPLREAG-----VSQLN--ISLD 135
Query: 221 EEAIAAISRLANAG 234
+ R++ G
Sbjct: 136 TLSAETFRRISKQG 149
>gi|115360432|ref|YP_777569.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
AMMD]
gi|115285760|gb|ABI91235.1| GTP cyclohydrolase subunit MoaA [Burkholderia ambifaria AMMD]
Length = 372
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 87/255 (34%), Gaps = 55/255 (21%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C R+ G + SS+ A L I + ++ TGG+PL+
Sbjct: 46 VIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAFISLGVEKIRLTGGEPLL 105
Query: 157 LSHKRLQKVLKTLRYIKHVQ----ILRFHSRV-----------------PIVDPQRINPE 195
+ L+ +++ L + + + + V I+
Sbjct: 106 RRN--LEALIERLATLTTLDGKPVEIALTTNGSLLAAKARSLRDAGLSRVTVSLDAIDDA 163
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEIL 254
+ + + +A PV +A I AG + +V+ +G+NDD +
Sbjct: 164 VFRRMSDADVPV-------------ARVLAGIEAAQAAGLAPVKVNAVIERGVNDDQ--I 208
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEGQKIVASLKEKI----SGL-- 304
L+R F + ++ + D G S + + ++++ + + G
Sbjct: 209 LPLVRHFRHSGVAVRFIEYMD-VGGASAWSGDKVVPATRMRELIEASYPLVLVGEPGHDA 267
Query: 305 -CQPFYILDLPGGYG 318
+D G G
Sbjct: 268 TAIRCRHIDGAGEVG 282
>gi|155967348|gb|ABU41512.1| NirJ2 [Heliophilum fasciatum]
Length = 330
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 71/211 (33%), Gaps = 37/211 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C ++C C+R G++ LS+++ ++ L I + + +IF+GG+PL+
Sbjct: 3 ISWNTTNQCNMFCDHCYRDA--GAKASEELSTEEGKSLLDEIAK-AGFKIMIFSGGEPLM 59
Query: 157 LSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
L + L F + + I E+ Q LK+AG
Sbjct: 60 RPDIVELVQHATNLG-----LRSVFGTNGTL-----ITLEMAQNLKKAGAMGIGISLDSM 109
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+EA+ + AG+ + ++ + + + L VE+
Sbjct: 110 DKQKHDTFRRYPNAWDEAVEGMKNCRAAGLGFQIHTTVM---DWNRHEVHALTDFAVEMG 166
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
++ F + I
Sbjct: 167 AVGHHTF----------FLVPTGRAVSIEEE 187
>gi|34557848|ref|NP_907663.1| 2-methylthioadenine synthetase [Wolinella succinogenes DSM 1740]
gi|34483566|emb|CAE10563.1| conserved hypothetical protein-2-methylthioadenine synthetase
[Wolinella succinogenes]
Length = 416
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 59/197 (29%), Gaps = 15/197 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G L + + + + E + TG +
Sbjct: 133 KSRAFVKVQEGCDFSCSYCIIPSVRGK--ARSLPVDRIVSQVEILAQH-GFGEFVLTGTN 189
Query: 154 PLILSHK---RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ + K+LK L IK V+ LR S P L + + +
Sbjct: 190 VGSYGKESGLNVAKLLKALSQIKGVKRLRLGSLEPSQIDAEFMELLEEPFMARHLHIALQ 249
Query: 211 IH-------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
N E + RLA G L + +L + E+ FV
Sbjct: 250 HTSPKMLQIMNRRNEAQGDLA-LFERLAQKGYALGT-DFILGHPGESEEVWKEAWERFVA 307
Query: 264 LRIKPYYLHHPDLAAGT 280
+ + GT
Sbjct: 308 FPLTHLHAFVYSPREGT 324
>gi|169343771|ref|ZP_02864770.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
C str. JGS1495]
gi|169298331|gb|EDS80421.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
C str. JGS1495]
Length = 331
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 91/245 (37%), Gaps = 25/245 (10%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I L C + C +C ++ +++ + + I +V
Sbjct: 12 KYGREIDYLRISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKV 70
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ + + ++K + I ++ + + I+ ++ LK +
Sbjct: 71 RLTGGEPLVR--EGIVDLIKNINKIPEIEEICSTTNG-ILLGDKVKELSENGLK--RVNI 125
Query: 208 YIAI-HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + E + ++ + +I + + + +V+L+ N D + +L+
Sbjct: 126 SLDTLKEDRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFNKD--EILDLINLA 183
Query: 262 VELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPG 315
E I ++ F+ +T E +I+ K+ +S L P + + G
Sbjct: 184 CENPIDLRFIELM-PIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEG 242
Query: 316 GYGKV 320
GK+
Sbjct: 243 FKGKI 247
>gi|289667851|ref|ZP_06488926.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. musacearum NCPPB4381]
Length = 343
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 51/156 (32%), Gaps = 24/156 (15%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 29 VIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS-VGVTKVRLTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RIN-------PELIQC 199
L ++ L I+ ++ L + ++ Q RI P L +
Sbjct: 88 RRD--LPSLIARLGAIEGIEDLALTTNGTLLARQAVALRQAGLRRITVSMDALEPALFRR 145
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
+ + + E + I+ + GI
Sbjct: 146 MSGDRGEIAQVLAGIAAAELAGFQRLKINCVVQRGI 181
>gi|256371930|ref|YP_003109754.1| Radical SAM domain protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256008514|gb|ACU54081.1| Radical SAM domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 375
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 64/198 (32%), Gaps = 22/198 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGG 152
P +L + CP+ C C + + +++ A + + + VI FTGG
Sbjct: 18 PRLVLWETTQACPLACVHCRANAISTPDPDELTTAEGF-ALIDDLAAVAGPRPVIVFTGG 76
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI- 211
DPL L I H H V +RI P + L +AG
Sbjct: 77 DPLSRPD--------LLDLIAHAAARGLHVAVSPAVSERITPATLTALYDAGARAISISL 128
Query: 212 ---HANH--PYEFSEEAIAAISRL---ANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
NH A+ + L + G+ + + +++ +D +A +
Sbjct: 129 DGLGRNHDATRRVPGHALRTLEALTMARSVGLRVQVNTTVMRTTVNDLPAVAE---AMLA 185
Query: 264 LRIKPYYLHHPDLAAGTS 281
I + + S
Sbjct: 186 RNITTWEVFFLVPTGRAS 203
>gi|27262458|gb|AAN87510.1| molybdenum cofactor biosynthesis protein A [Heliobacillus mobilis]
Length = 327
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C + + VL ++ E + I I V TGG+PL+
Sbjct: 16 VTDRCNLRCVYCMPEQGIPLVDHEEVLRFEEFEQLIR-IAAAEGIRRVRVTGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
K + + ++ I ++ + +
Sbjct: 73 KGIVDFVARVKEIPGIEDVALTTNGI 98
>gi|310658965|ref|YP_003936686.1| molybdopterin biosynthesis protein a [Clostridium sticklandii DSM
519]
gi|308825743|emb|CBH21781.1| molybdopterin biosynthesis protein A [Clostridium sticklandii]
Length = 316
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 13/157 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ +C C +C + +L ++ E + ++ I ++ TGG+PL+ K
Sbjct: 16 VTDLCNFNCEYCMPEGIEKKDHSDILRIEEIENICK-VAARNGIKKIRLTGGEPLVR--K 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELIQCLKEAGKPVYIAIHAN 214
+ ++ ++ I + + + ++D + + L + V+ I
Sbjct: 73 GILSLINKIKSIDEITEVAITTNGVLLDEMAKDLKAAGLDRINLSLDSMDENVFRKITRG 132
Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
H E S E + +AG + +VL+ +ND+
Sbjct: 133 H--ELS-EVYKGLESALDAGFENIKINTVLINKVNDN 166
>gi|319650007|ref|ZP_08004156.1| molybdenum cofactor biosynthesis protein A [Bacillus sp.
2_A_57_CT2]
gi|317398188|gb|EFV78877.1| molybdenum cofactor biosynthesis protein A [Bacillus sp.
2_A_57_CT2]
Length = 338
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 94/253 (37%), Gaps = 41/253 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C++C E+ G K +LS ++ E LA I + ++ TGG+PL
Sbjct: 21 VIDRCNFRCQYCMPAEVFGPDFAFLPKNELLSYEEIER-LAKIFVSLGVEKIRLTGGEPL 79
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-----YIA 210
+ + K++K L I+ ++ + + ++ P+ L + +
Sbjct: 80 MRKD--MPKLVKMLSDIEGLKDIGLTTNG-VLLPKHAKDLKEAGLVRVNISLDSLDDELF 136
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
N + + I AG+ + V+ KG+ND + + + + ++ +
Sbjct: 137 GKINGRNVGVKPVLKGIEAAKEAGLGVKLNMVVKKGLNDS--EIVPMAKFCKDNGLQLRF 194
Query: 271 LHHPDLAAGTSHFR----LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+ + D T+ ++ +T +E I+ Y+L+ +D
Sbjct: 195 IEYMD-VGSTNGWKMDEVVTKKEIYDILKE-----------HYLLE--------PVDPDY 234
Query: 327 IKKVGNGSYCITD 339
+V Y D
Sbjct: 235 FGEV-AKRYRYKD 246
>gi|164686289|ref|ZP_02210319.1| hypothetical protein CLOBAR_02727 [Clostridium bartlettii DSM
16795]
gi|164601891|gb|EDQ95356.1| hypothetical protein CLOBAR_02727 [Clostridium bartlettii DSM
16795]
Length = 432
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 76/209 (36%), Gaps = 37/209 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C YC +C + + S+D E+ + ++ + EV+ TG
Sbjct: 141 KTRAFMKIQDGCDRYCSYC-----IIPYARGRVRSRDLESIVKEVENLASNGYKEVVLTG 195
Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
D S +L V+K + I+ ++ +R S V+P E ++ +
Sbjct: 196 IHVASYGKDIKD----SDIKLLDVIKQINDIEGIERIRLSS----VEPILFTDEFVEAVS 247
Query: 202 EAGK--PVYIAIHANHPYE---------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
K P Y + E +EE A + RL A + + ++ G +
Sbjct: 248 TMDKVCPHYHLSLQSGCDETLKRMKRRYTTEEYKAIVDRLRAAIPNVSITTDVIVGFPGE 307
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ F++ I+ ++H +
Sbjct: 308 TNEEFDKTYEFLK-DIELTHMHVFKYSPR 335
>gi|310827022|ref|YP_003959379.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum
KIST612]
gi|308738756|gb|ADO36416.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum
KIST612]
Length = 318
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 65/165 (39%), Gaps = 28/165 (16%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ +C + C +C E V + T LS ++ EA + I ++ TGG+PL+
Sbjct: 16 ITDLCNLRCVYCMPEEGVPKRRHATNLSFEEIEALVR-AGADMGIDKIRLTGGEPLV-RA 73
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L ++K L I ++ + ++ PE+ LK AG F
Sbjct: 74 GVLD-LVKKLGAIPGIRDFAMTTNGILL------PEMAADLKAAGLRRVNI----SLDTF 122
Query: 220 SEEAIAAISRLAN-----AGI---------ILLSQSVLLKGINDD 250
E A I+R AGI L +VL+KG NDD
Sbjct: 123 DPEKYARITRCGRLEDALAGIDAAVAAGLTPLKINTVLIKGFNDD 167
>gi|227872811|ref|ZP_03991125.1| 2-methylthioadenine synthase [Oribacterium sinus F0268]
gi|227841338|gb|EEJ51654.1| 2-methylthioadenine synthase [Oribacterium sinus F0268]
Length = 478
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 25/151 (16%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVH-RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E + P E P+ + + + R +K+ C +C +C +
Sbjct: 124 ENDASPMEPFSPVREEGEYENLFLSKPKDKSRAFVKVQDGCNQFCAYC-----IIPYVRG 178
Query: 125 VLSSKDTEAALAYIQ--EKSQIWEVIFTG-------GDPLILSHKR----------LQKV 165
+ S+ E L I+ K EV+ TG D LS++ L +
Sbjct: 179 RIRSRKEEDCLEEIRHLAKEGFQEVVLTGIHLSSYGLDFENLSYEYASRKAETGEALLHL 238
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
+ + I +Q +R S P + +R L
Sbjct: 239 ISEVGKIPGIQRIRLGSLEPRIITERFLAGL 269
>gi|229155743|ref|ZP_04283849.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
4342]
gi|228627729|gb|EEK84450.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
4342]
Length = 337
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G+ + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGADYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-------- 207
+ L K+++ L ++ ++ + + + Q + LKEAG
Sbjct: 79 LRKD--LPKLIERLAKLEGIKDIGLTTNGIHLAKQ------AKVLKEAGLKRVNISLDAI 130
Query: 208 --YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Y+ N ++ + + AG+ + V+ KG+ND
Sbjct: 131 EDYVFQKINGRNVSTKPVLKGMEEAKAAGLEVKVNMVVKKGMNDS 175
>gi|146303294|ref|YP_001190610.1| radical SAM domain-containing protein [Metallosphaera sedula DSM
5348]
gi|145701544|gb|ABP94686.1| Radical SAM domain protein [Metallosphaera sedula DSM 5348]
Length = 366
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 24/207 (11%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
D + + G+ RYP ++ + C + C C+ + LS+ A
Sbjct: 9 SDRKEEADRIRYAGLKDRYPSVLVFNVTRNCNLRCLHCYSGSGTQLFQDLPLST--WINA 66
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ + ++ +GG+PL L R I + + ++ +R
Sbjct: 67 VKQ-ASDMGVKHILLSGGEPLARRDLHLIAREAWERGI----RVELSTNGTMLTRER--- 118
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA----------GIILLSQSVLL 244
++ LK Y+ + + P ++ A A G+ + +
Sbjct: 119 --LEELKNYVD--YVGVSLDGPEPIHDKFRGVEGAFAKALKGIRTAKEIGLKTGLRFTIT 174
Query: 245 KGINDDPEILANLMRTFVELRIKPYYL 271
+ + + + +LMR R+ Y+L
Sbjct: 175 RENYEYVDFVFDLMRKEGINRVCFYHL 201
>gi|260437149|ref|ZP_05790965.1| RNA modification enzyme, MiaB family [Butyrivibrio crossotus DSM
2876]
gi|292810461|gb|EFF69666.1| RNA modification enzyme, MiaB family [Butyrivibrio crossotus DSM
2876]
Length = 439
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 62/172 (36%), Gaps = 25/172 (14%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFTG 151
LK+ C +C +C + G+ + + Y+ + E+ G
Sbjct: 146 YLKIAEGCDKHCTYCSIPMIRGAY--RSVPMDELVKEAEYLADNGVKELIIVAQEITVYG 203
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIA 210
D + K+L ++L L I +Q +R P+ I ELI+ ++ K YI
Sbjct: 204 KD--LYGEKKLPELLHRLCKIPGIQWIRL----LYCYPEEITDELIETIRTEKKICHYID 257
Query: 211 IHANHPYEF----------SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+ H + + E IS+L + ++ L+ G + E
Sbjct: 258 MPIQHASDKILKAMGRRTNNVELRNIISKLRKEIPDICLRTTLITGFPGETE 309
>gi|167037275|ref|YP_001664853.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040032|ref|YP_001663017.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X514]
gi|300914120|ref|ZP_07131436.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X561]
gi|307724644|ref|YP_003904395.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X513]
gi|320115692|ref|YP_004185851.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166854272|gb|ABY92681.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X514]
gi|166856109|gb|ABY94517.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300889055|gb|EFK84201.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X561]
gi|307581705|gb|ADN55104.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X513]
gi|319928783|gb|ADV79468.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 317
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +L +++ + I + I +V FTGG+PL+
Sbjct: 16 VTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
K ++ ++ IK ++ + + + E+ LKEAG
Sbjct: 73 KGIENIIYETSKIKGIEDIALTTNGTKLY------EMADTLKEAGLK 113
>gi|307266180|ref|ZP_07547723.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
wiegelii Rt8.B1]
gi|306918784|gb|EFN49015.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 317
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +L +++ + I + I +V FTGG+PL+
Sbjct: 16 VTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
K ++ ++ IK ++ + + + E+ LKEAG
Sbjct: 73 KGIENIIYETSKIKGIEDIALTTNGTKLY------EMADTLKEAGLK 113
>gi|295402412|ref|ZP_06812366.1| molybdenum cofactor biosynthesis protein A [Geobacillus
thermoglucosidasius C56-YS93]
gi|294975575|gb|EFG51199.1| molybdenum cofactor biosynthesis protein A [Geobacillus
thermoglucosidasius C56-YS93]
Length = 340
Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 77/209 (36%), Gaps = 17/209 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G + +L+ ++ E + ++ TGG+PL
Sbjct: 23 VTDQCNFRCVYCMPAEIFGPNFRFLREDELLTIEEMTLLAESFAE-LGVEKIRITGGEPL 81
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP--IVDPQRINPELIQCLKEAGKPV--YIAI 211
+ L ++ L I ++ + + + +R+ ++ + + + I
Sbjct: 82 LRRD--LDVFIERLVRIPGIRDIGLTTNGIHLVKWAKRLKEAGLKRVNVSLDALDDDIFK 139
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
N + + I AG+ + V+ KG+ND I + F E I ++
Sbjct: 140 KMNGVGVGVKPVLKGIEAAVEAGLGVKVNMVVKKGMNDSQII--PMASYFKERGITLRFI 197
Query: 272 HHPDL-AAGTSHFR--LTIEEGQKIVASL 297
D+ F +T ++ +++ L
Sbjct: 198 EFMDVGTTNGWDFSHVVTKKDMYELLQQL 226
>gi|312376680|gb|EFR23697.1| hypothetical protein AND_12429 [Anopheles darlingi]
Length = 708
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKS 142
+ G H Y L C + C++C E V +QK +L+S++
Sbjct: 178 TDTFGRFHTYLRISL---TERCNLRCKYCMPAEGVQLTQKDKLLTSEEVIRLANLFVA-E 233
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
+ ++ TGG+P + L +++ L+ I +++ + + ++ Q +
Sbjct: 234 GVRKIRLTGGEPTVRKD--LPEIVSQLKAIPNLESVGITTNGLMLTRQLV 281
>gi|319787616|ref|YP_004147091.1| molybdenum cofactor biosynthesis protein A [Pseudoxanthomonas
suwonensis 11-1]
gi|317466128|gb|ADV27860.1| molybdenum cofactor biosynthesis protein A [Pseudoxanthomonas
suwonensis 11-1]
Length = 339
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGT----VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V GT +S E + + + ++ TGG+PL+
Sbjct: 26 VIDACNFRCGYCMPADRVPDDHGTSAASRMSFDQIETLVRGFVQ-VGVRKLRLTGGEPLL 84
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ L +++ L I ++ L +
Sbjct: 85 RRN--LPELIARLARIPGIEDLALTTNG 110
>gi|85859326|ref|YP_461528.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
gi|85722417|gb|ABC77360.1| radical SAM superfamily [Syntrophus aciditrophicus SB]
Length = 408
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 71/203 (34%), Gaps = 32/203 (15%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP + ++ C + C C + + L++ + + + I ++FTGG
Sbjct: 60 YPGHPVWEVTRACNLSCIHCHAKSSQAASDE--LTTAEGKRLIDQIASMPAFRTLVFTGG 117
Query: 153 DPLILSH--KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+PL+ + L+ K L I + + I+ + + LK+ G V
Sbjct: 118 EPLVRKDIFELLRHSQKAGLANI-------LATNGTL-----IDDAMARKLKDHGV-VCN 164
Query: 210 AIHANHPYE-----------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
AI + P E E A+ I AGI+L + ++ + +L+ L+
Sbjct: 165 AISVDAPDETIHNYVRNSPRAFELALRGIEATKKAGILLQINTTAMEY---NLPVLSELI 221
Query: 259 RTFVELRIKPYYLHHPDLAAGTS 281
+ ++
Sbjct: 222 DFINDQGASVMLMYQLVAVGRGE 244
>gi|256828649|ref|YP_003157377.1| nitrogenase cofactor biosynthesis protein NifB [Desulfomicrobium
baculatum DSM 4028]
gi|256577825|gb|ACU88961.1| nitrogenase cofactor biosynthesis protein NifB [Desulfomicrobium
baculatum DSM 4028]
Length = 418
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 83/238 (34%), Gaps = 28/238 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAY----IQEKSQIWEVI 148
R+ L + C + C +C R+ ++ ++S + A+ Y ++++ +I V
Sbjct: 22 GRVHLPVAPGCNIQCNYCNRKYDCVNESRPGVTSAILPPDRAVEYLDEVLKKEPRITVVG 81
Query: 149 FTG-GDPLILSHKRLQ-------------KVLKT--LRYIKHVQILR-FHSRVPIVDPQR 191
G GDP+ + + L+ L + L +HV L V
Sbjct: 82 IAGPGDPMAEAKRTLETIERINAKYPNMLYCLSSNGLALPEHVDRLAELGVTHVTVTMNA 141
Query: 192 INPEL-IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++PE+ + + E + +I L GI + S+++ G+ND
Sbjct: 142 VDPEIGAKIYSWVRVGKVVYRGVEGAKILLERQLESIRLLKAKGITVKVNSIIIPGVNDH 201
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
I + L L A T + ++++ L+ K G P
Sbjct: 202 HLIEVAKVAA--SLGADIQNLIPLHPTADTPFAGVEEPT-KELIHELRAK-GGALVPQ 255
>gi|76809653|ref|YP_334300.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1710b]
gi|76579106|gb|ABA48581.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1710b]
Length = 370
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 67/195 (34%), Gaps = 31/195 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLK 201
+ + L+ +++ L + V + + ++ R+ L L
Sbjct: 102 LRKN--LEFLIERLANMTTVDGRPLDITLTTNGSLLMRKAKSLRDAGLSRVTVSL-DALD 158
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRT 260
+ + +H S + + I AG + V+ +G ND + + R
Sbjct: 159 DTLFKLR-----DHADFASADVLDGIFAAHAAGLAPVKVNMVVKRGTND--AEIVPMARR 211
Query: 261 FVELRIKPYYLHHPD 275
F + ++ + D
Sbjct: 212 FKGTGVVLRFIEYMD 226
>gi|325925005|ref|ZP_08186428.1| GTP cyclohydrolase subunit MoaA [Xanthomonas perforans 91-118]
gi|325544589|gb|EGD15949.1| GTP cyclohydrolase subunit MoaA [Xanthomonas perforans 91-118]
Length = 343
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 29 VIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS-VGVTKVRLTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L ++ L I+ ++ L + ++ Q +
Sbjct: 88 RRD--LPSLIARLAAIEGIEDLALTTNGTLLGRQAV 121
>gi|42782634|ref|NP_979881.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10987]
gi|42738560|gb|AAS42489.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10987]
Length = 338
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I V+ + +
Sbjct: 79 LR--RGLPQLIERLNKINGVEDIGLTTNGS 106
>gi|294345246|emb|CBL51476.1| conserved radical SAM domain containing hypothetical protein
[Thermus thermophilus]
Length = 375
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 72/235 (30%), Gaps = 52/235 (22%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RYP + ++ + C + CR C M G LS+++ + + ++ TG
Sbjct: 8 RYPYLVAWEVTNACLLACRHCRASAMPHPLPGE-LSTEEGLRLIEEVATYRPKPLLLLTG 66
Query: 152 GDPLILSHKRL-----------------------QKVLKTLRYIKHVQILRF-------- 180
GDPL L ++++ L+ V L
Sbjct: 67 GDPLAREDLFLLMERARALGLKVGLTPAATPLLTREMVFRLKEAG-VTRLALSLDGASPE 125
Query: 181 ---HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
R QR E + KEAG P + E E A LA G++L
Sbjct: 126 SHDAFRGEAGTFQR-TLEALSWAKEAGLPTQVNTTVT--RENWPEIQALPDLLAEKGVVL 182
Query: 238 LS--------QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
S + LLK ++ E + Y H HFR
Sbjct: 183 WSLFFLVPVGRGALLKQLSAKGFEEVLHW--LYE--VSKAYPFHVK-TTEAHHFR 232
>gi|332799055|ref|YP_004460554.1| MiaB-like tRNA modifying enzyme [Tepidanaerobacter sp. Re1]
gi|332696790|gb|AEE91247.1| MiaB-like tRNA modifying enzyme [Tepidanaerobacter sp. Re1]
Length = 435
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 52/158 (32%), Gaps = 22/158 (13%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVI 148
HR R LK+ C ++C +C + + S+ + + Q K E++
Sbjct: 139 HRQKTRAFLKIQDGCNMFCSYC-----IIPYARGPVRSRSIDNIIDEAQSLAKDGFKEIV 193
Query: 149 FTGGD-PLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
TG L + L V+ + I+ ++ +R S + L +K+
Sbjct: 194 LTGIHLGLYGRDFKDENIHLLDVISRIADIEGIERIRLSSIEAMELTDEFLKSLCG-IKK 252
Query: 203 AGKPVYIAIHANHPYEF--------SEEAIAAISRLAN 232
++ + + ++E I +
Sbjct: 253 FCHHFHVPLQSGCDTVLRRMNRRYTTDEFRDRIDYIRQ 290
>gi|326942510|gb|AEA18406.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 337
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LAKLIARLVKIDGLIDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 DDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 175
>gi|297531012|ref|YP_003672287.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. C56-T3]
gi|297254264|gb|ADI27710.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. C56-T3]
Length = 341
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G + +L+ ++ A LA + + ++ TGG+PL
Sbjct: 24 VTDQCNFRCVYCMPAEVFGPNFRFLAEDQLLTVEEM-ALLAECFVELGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP--IVDPQRI 192
+ L +++ L + ++ + + + +R+
Sbjct: 83 LRRD--LDALIERLSALPGLRDIGLTTNGVHLVKWAKRL 119
>gi|299783310|gb|ADJ41308.1| Molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus
fermentum CECT 5716]
Length = 332
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + + + C + C +C +E + VLS + + + I +V T
Sbjct: 10 RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGIHKVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
GG+PL+ + +++ ++ I ++ + +
Sbjct: 69 GGEPLLRTDVV--DIVRRIKEIDGIEDVSITTNGL 101
>gi|269303354|gb|ACZ33454.1| RNA modification enzyme, MiaB family [Chlamydophila pneumoniae
LPCoLN]
Length = 421
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + G E LA I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
GD + L +++ + I ++ +R S +DP I +L + + +
Sbjct: 189 INVGD-YCDGERSLASLIEQVDQIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241
>gi|15836008|ref|NP_300532.1| hypothetical protein CPj0477 [Chlamydophila pneumoniae J138]
gi|16752565|ref|NP_444827.1| hypothetical protein CP0277 [Chlamydophila pneumoniae AR39]
gi|33241829|ref|NP_876770.1| hypothetical protein CpB0496 [Chlamydophila pneumoniae TW-183]
gi|14916790|sp|Q9Z874|Y477_CHLPN RecName: Full=Putative methylthiotransferase
CPn_0477/CP_0277/CPj0477/CpB0496
gi|7189201|gb|AAF38135.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8978847|dbj|BAA98683.1| hypothetical protein [Chlamydophila pneumoniae J138]
gi|33236338|gb|AAP98427.1| hypothetical protein CpB0496 [Chlamydophila pneumoniae TW-183]
Length = 421
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + G E LA I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
GD + L +++ + I ++ +R S +DP I +L + + +
Sbjct: 189 INVGD-YCDGERSLASLIEQVDQIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241
>gi|255081048|ref|XP_002504090.1| molybdopterin synthase [Micromonas sp. RCC299]
gi|226519357|gb|ACO65348.1| molybdopterin synthase [Micromonas sp. RCC299]
Length = 365
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 37/223 (16%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y L C + C +C E + + K +LS+ + + +
Sbjct: 46 GRRHNYLRISL---TEKCNLRCLYCMPEEGIDLTAKEELLSTDEVVRVARLFVAN-GVDK 101
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ TGG+P + L+++++ LR + ++ + + + + L+ AG
Sbjct: 102 IRLTGGEPTVRPD--LEEIIRRLRALPGLRDIAITTNGLTLHRN------LHALQAAGL- 152
Query: 207 VYIAIHANHPYEFSEEAIAAISRL-ANAGI----------------ILLSQSVLLKGIND 249
H N L G + VL++G+ND
Sbjct: 153 ----THVN--ISLDTLVPPKFELLTRRRGHDRVLKSIDRAVELGYDPVKVNVVLMRGVND 206
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
D + M + ++ D ++ E ++
Sbjct: 207 DELLDFVEMTREKPINVRFIEFMPFDGNKFEEKKVVSYCEAKE 249
>gi|65319439|ref|ZP_00392398.1| COG2896: Molybdenum cofactor biosynthesis enzyme [Bacillus
anthracis str. A2012]
Length = 337
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L K++ L ++ + + + + Q R+N L +++
Sbjct: 79 LRKD--LPKLIARLAKLEGXKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDRVF 135
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 136 QKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|332797245|ref|YP_004458745.1| Fe-S oxidoreductase family [Acidianus hospitalis W1]
gi|332694980|gb|AEE94447.1| Fe-S oxidoreductase family [Acidianus hospitalis W1]
Length = 351
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 51/299 (17%), Positives = 99/299 (33%), Gaps = 64/299 (21%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R P + ++ CP+ C+ C R + L++ + + L I ++ V+FTG
Sbjct: 5 RAPHLVFWEVTKACPLACKHC-RANAIQDPLPGELTTAEGKKLLEEISTFGKVV-VVFTG 62
Query: 152 GDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GDPL L K L + + ++N + I+ +KE+G Y++
Sbjct: 63 GDPLSRDDIFELMDYAKQLG---------LVTSIAPAPSYKLNEDTIRKIKESGVT-YMS 112
Query: 211 IHANHPYEFSEEAIAAISRL-------------ANAGIILLSQSVLLKG-INDDPEILAN 256
I + E + L G+I+ +++ KG + P+I
Sbjct: 113 ISLDGAK---PETHDWLRGLTSYKYAINGIKEGLKQGLIVQVNTLIWKGSYPELPQIAKI 169
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIVASLKEKISGLCQPFYILDLP- 314
L +L +K + + S + E +K+V L ++S ++ P
Sbjct: 170 LH----DLGVKVWEIFFLIPVGRGSIELDIPKENYKKVVNFLL-EVSKYNIIVRTVEGPF 224
Query: 315 -------------------------GGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
G K+ +D + + + YP
Sbjct: 225 FRRAKLEYPEGFEDNELIEELRKLLGKPPKMDVDKSIVPTRDGSGVIFISYDGEI--YP 281
>gi|295697188|ref|YP_003590426.1| molybdenum cofactor biosynthesis protein A [Bacillus tusciae DSM
2912]
gi|295412790|gb|ADG07282.1| molybdenum cofactor biosynthesis protein A [Bacillus tusciae DSM
2912]
Length = 344
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y + + + C + C +C V + +++ ++ + + + +
Sbjct: 21 GRVHDY---LRISVTDRCNLRCLYCMPAHGVQFMESRRLMTYEEIVTVVR-VAARLGVKR 76
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ TGG+PL+ + ++++ L I ++ + +
Sbjct: 77 LRITGGEPLVRPD--IDRLIEALGAIPGIEDMAMTTNAL 113
>gi|242371916|ref|ZP_04817490.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis M23864:W1]
gi|242350423|gb|EES42024.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis M23864:W1]
Length = 340
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +L+ + I + + ++ TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDDFVFLPKDELLTFDEMTRISR-IYAELGVKKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I+ ++ + +
Sbjct: 79 LRRN--LYQLIEQLNEIEGIEDIGLTTNGL 106
>gi|153938937|ref|YP_001391265.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum F
str. Langeland]
gi|166217247|sp|A7GEQ5|MOAA_CLOBL RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|152934833|gb|ABS40331.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum F
str. Langeland]
Length = 319
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E +V + ++ ++ + + ++ FTGG+PLIL
Sbjct: 16 VTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLILKD 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE- 218
+ K++ I ++ + + ++ ++++ LK+AG + I + E
Sbjct: 75 --IDKLIYNTSKINSIKDIAMTTNAILL------EDMVEELKKAGLK-RVNISLDSLKED 125
Query: 219 ----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ + L+ + +V++KGINDD
Sbjct: 126 RFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167
>gi|148379902|ref|YP_001254443.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. ATCC 3502]
gi|153932339|ref|YP_001384199.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. ATCC 19397]
gi|153937083|ref|YP_001387740.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. Hall]
gi|226949238|ref|YP_002804329.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
A2 str. Kyoto]
gi|166217245|sp|A7FUZ6|MOAA_CLOB1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|166217246|sp|A5I365|MOAA_CLOBH RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|254811539|sp|C1FPG7|MOAA_CLOBJ RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|148289386|emb|CAL83482.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. ATCC 3502]
gi|152928383|gb|ABS33883.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. ATCC 19397]
gi|152932997|gb|ABS38496.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. Hall]
gi|226843612|gb|ACO86278.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
A2 str. Kyoto]
gi|322806201|emb|CBZ03769.1| molybdenum cofactor biosynthesis protein MoaA [Clostridium
botulinum H04402 065]
Length = 319
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E +V + ++ ++ + + ++ FTGG+PLIL
Sbjct: 16 VTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLILKD 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE- 218
+ K++ I ++ + + ++ ++++ LK+AG + I + E
Sbjct: 75 --IDKLIYNTSKINSIKDIAMTTNAILL------EDMVEELKKAGLK-RVNISLDSLKED 125
Query: 219 ----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ + L+ + +V++KGINDD
Sbjct: 126 RFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167
>gi|157112872|ref|XP_001657654.1| molybdopterin cofactor synthesis protein a [Aedes aegypti]
gi|108884620|gb|EAT48845.1| molybdopterin cofactor synthesis protein a [Aedes aegypti]
Length = 481
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALA 136
SPL R+ + + L C + C++C E V + K +L++ + LA
Sbjct: 98 WQQETDSPLTDNFGRFHSYLRISLTERCNLRCKYCMPAEGVQLTPKDNLLTTDEVLR-LA 156
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
+ + + ++ TGG+P + L ++++ L+ I ++ + + ++ Q +
Sbjct: 157 TLFVEQGVRKIRLTGGEPTVRKD--LPEIIERLKRIPLLESVGITTNGLMLTRQLV 210
>gi|114797605|ref|YP_760268.1| molybdenum cofactor biosynthesis protein A [Hyphomonas neptunium
ATCC 15444]
gi|114737779|gb|ABI75904.1| molybdenum cofactor biosynthesis protein MoaA [Hyphomonas neptunium
ATCC 15444]
Length = 330
Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 4/94 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + L++ + E + I +V TGG+P +
Sbjct: 23 VTEVCNFRCTYCLPDGYRKTGSMDFLAADEIERLVRAFTG-LGIRKVRLTGGEPTVRKD- 80
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
L +++ + V+ + + P+RI+
Sbjct: 81 -LTQLIARISATPGVEKVALTTNGW-NLPRRIDE 112
>gi|313669401|ref|YP_004049828.1| GTP cyclohydrolase subunit MoaA [Sulfuricurvum kujiense DSM 16994]
gi|313156598|gb|ADR35275.1| GTP cyclohydrolase subunit MoaA [Sulfuricurvum kujiense DSM 16994]
Length = 321
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 76/205 (37%), Gaps = 24/205 (11%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+V R+ + + C CR+C + K +LS ++ A + I + I
Sbjct: 2 LVDRFKRHVTYLRVSVTERCNFRCRYCMAEKPFSWVPKENLLSYEELFAFIK-IGIDNGI 60
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
++ TGG+P + L +++ + + + ++ P L LK+AG
Sbjct: 61 QKIRLTGGEPTTR--ENLDELIAMIHSYAPDVDIGLTTNGYLL------PSLAHKLKKAG 112
Query: 205 KPVYIAI---------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
H + E + I AG+ + SV+L+ IN++ +
Sbjct: 113 LRRVNISLDSLDRNTLHYIAQKDVLPEILQGIEAAVEAGLSVKINSVILRNINEN--EVV 170
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGT 280
+L + + Y+ + + + T
Sbjct: 171 SLFNYAQSIHAQIRYIEYMENSHAT 195
>gi|292670086|ref|ZP_06603512.1| radical SAM domain protein [Selenomonas noxia ATCC 43541]
gi|292648274|gb|EFF66246.1| radical SAM domain protein [Selenomonas noxia ATCC 43541]
Length = 346
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 74/217 (34%), Gaps = 42/217 (19%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C +YC C+R G + LS+++ + L I + + +IF+GG+PL
Sbjct: 17 ISWNTTNACNMYCAHCYRDA--GCRAEEELSTEEAKKLLREIAK-AGFRIMIFSGGEPLT 73
Query: 157 LSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
L + L I F + + I+ + + LKEAG + I +
Sbjct: 74 RPDILELVSYARGLGLIP-----VFGTNGTL-----IDLPMAKALKEAG-ACGMGISLDS 122
Query: 216 ------------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P + ++ G+ + ++ + + + + VE
Sbjct: 123 LDKQKHDAFRSFPGGWDGAVRGMMNC-RAVGLPFQIHTTVM---DWNAHEIEAMTDFAVE 178
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
+ + ++ F + + I L+
Sbjct: 179 IGARAHHFF----------FLVPTGRAETIEEESLRA 205
>gi|167947614|ref|ZP_02534688.1| hypothetical protein Epers_14152 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 59
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+I +GGDPL+L +RL L L I H++ LR HSR+P+V P+RI+ L L +
Sbjct: 1 MILSGGDPLLLDERRLAGWLDDLAAIPHLRRLRLHSRLPVVLPERISESLAHLLTASR 58
>gi|172065715|ref|YP_001816427.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MC40-6]
gi|171997957|gb|ACB68874.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MC40-6]
Length = 371
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 89/256 (34%), Gaps = 57/256 (22%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C R+ G + SS+ A L I + ++ TGG+PL+
Sbjct: 45 VIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAFISLGVEKIRLTGGEPLL 104
Query: 157 LSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRINP 194
+ L+ +++ L + V + LR SRV + I+
Sbjct: 105 RRN--LEALIERLATLTTVDGKPVEIALTTNGSLLAAKARTLRDAGLSRVTVSL-DAIDD 161
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEI 253
+ + + + PV +A I AG + +V+ +G NDD
Sbjct: 162 TVFRRMSDVEVPV-------------ARVLAGIEAAQAAGLAPVKVNAVIERGANDDQ-- 206
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEGQKIVASLKEKI----SGL- 304
+ L+R F + ++ + D G S + + ++++ + + G
Sbjct: 207 ILPLVRHFRHSGVAVRFIEYMD-VGGASAWSGDKVVPATRMRELIEASYPLVLVGGPGHD 265
Query: 305 --CQPFYILDLPGGYG 318
+D G G
Sbjct: 266 ATAIRCRHIDGAGEVG 281
>gi|107022977|ref|YP_621304.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia AU 1054]
gi|116686780|ref|YP_840027.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia HI2424]
gi|105893166|gb|ABF76331.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia AU 1054]
gi|116652495|gb|ABK13134.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia HI2424]
Length = 374
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 81/226 (35%), Gaps = 48/226 (21%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C RE G+ + SS+ A L I + ++ TGG+PL+
Sbjct: 48 VIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEPLL 107
Query: 157 LSHKRLQKVLKTLRYIKHVQ----ILRFHSRV-----------------PIVDPQRINPE 195
+ L+ +++ L + V + + V ++
Sbjct: 108 RRN--LEALIERLAALTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSLDALDDA 165
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEIL 254
+ + + +A PV +A I AG + +V+ +G+NDD +
Sbjct: 166 VFRRMSDADVPV-------------ARVLAGIEAAHAAGLAPVKVNAVIERGVNDDQ--I 210
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
L+R F + ++ + D G S + + ++++
Sbjct: 211 LPLVRHFRHTGVAVRFIEYMD-VGGASFWSGDKVVPAARMRELIDE 255
>gi|270001734|gb|EEZ98181.1| hypothetical protein TcasGA2_TC000610 [Tribolium castaneum]
Length = 545
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 47/114 (41%), Gaps = 7/114 (6%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYI 138
++ + L G H Y L C + C++C E V S +L+S + +
Sbjct: 35 ESPLTDLFGRNHTYLRISL---SERCNLRCQYCMPEEGVKLSPSEKILTSDEIIQISR-L 90
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
+ ++ TGG+P + L +++ L+ I+ ++ + + + Q +
Sbjct: 91 FVNEGVTKIRLTGGEPTVRRD--LLAIIENLKKIEGLETVAMTTNGLTLTRQLV 142
>gi|313888926|ref|ZP_07822586.1| tRNA methylthiotransferase YqeV [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845099|gb|EFR32500.1| tRNA methylthiotransferase YqeV [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 432
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 46/118 (38%), Gaps = 15/118 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ E ++ + E++ TG
Sbjct: 143 RTRAYMKVQDGCNRFCTYC-----IIPFARGPIRSRTIEDSVREARTLADRGFKEIVLTG 197
Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L RL +++ + + ++ +R S V+P I + ++ + GK
Sbjct: 198 IHIGSFGMDLGDMRLIDLIEAIAEVDGIERIRLSS----VEPIIITDDFMERAVKTGK 251
>gi|15618388|ref|NP_224673.1| hypothetical protein CPn0477 [Chlamydophila pneumoniae CWL029]
gi|4376761|gb|AAD18617.1| Hypothetical Protein CPn_0477 [Chlamydophila pneumoniae CWL029]
Length = 421
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + G E LA I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
GD + L +++ + I ++ +R S +DP I +L + + +
Sbjct: 189 INVGD-YCDGERSLASLIEQVDRIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241
>gi|313638470|gb|EFS03650.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri FSL
S4-171]
Length = 335
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + +A I K I +
Sbjct: 11 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFMA-IMVKFGIKK 66
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 67 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 107
>gi|188585891|ref|YP_001917436.1| molybdenum cofactor biosynthesis protein A [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179350578|gb|ACB84848.1| molybdenum cofactor biosynthesis protein A [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 336
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 93 YPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y RI + C + C +C V +L+ +D E + + ++
Sbjct: 12 YGRRIDYLRISVTDRCNLRCFYCMPTSGVEKMSHPQILNFEDIERIVT-AAANLGVSKIR 70
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
FTGG+PL+ K++ T+ I ++ L + ++ Q
Sbjct: 71 FTGGEPLVRKD--FSKLVNTISRIPGIEDLSLTTNGVLLAQQ 110
>gi|115372589|ref|ZP_01459896.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310823867|ref|YP_003956225.1| radical sam domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115370310|gb|EAU69238.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309396939|gb|ADO74398.1| Radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 290
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ ++ C C +C ++ M G + + EAAL + WE +GG+P
Sbjct: 7 TVSWNIVGGCNYRCTYCVQKHMPGIGG---PTDEQLEAALTTLTALPGSWEFKISGGEPF 63
Query: 156 ILSHKRLQKVLKTLRYIKH 174
+L KRL +V K L H
Sbjct: 64 LL--KRLPEVAKRLATAGH 80
>gi|294666547|ref|ZP_06731788.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292603691|gb|EFF47101.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 343
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 29 VIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS-VGVTKVRLTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L ++ L I+ ++ L + ++ Q +
Sbjct: 88 RRD--LPSLIARLTAIEGIEDLALTTNGTLLARQAV 121
>gi|254828424|ref|ZP_05233111.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL N3-165]
gi|258600819|gb|EEW14144.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL N3-165]
Length = 333
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|58580682|ref|YP_199698.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|188578341|ref|YP_001915270.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|58425276|gb|AAW74313.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|188522793|gb|ACD60738.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 343
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 29 VIEACNFRCGYCMPADRVPDDYGFDSRQRLSFDQLETLVRAFVS-VGVTKVRLTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L ++ L I+ ++ L + ++ Q +
Sbjct: 88 RRD--LPSLIARLTAIEGIEDLALTTNGTLLARQAV 121
>gi|323358951|ref|YP_004225347.1| molybdenum cofactor biosynthesis enzyme [Microbacterium testaceum
StLB037]
gi|323275322|dbj|BAJ75467.1| molybdenum cofactor biosynthesis enzyme [Microbacterium testaceum
StLB037]
Length = 406
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 90/275 (32%), Gaps = 37/275 (13%)
Query: 50 HNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCP 106
P +AR P I P + G++ R+ + ++ C
Sbjct: 34 GGPRPALARSATPTDG---IHPAREPGAVRATGAPQSGGLLDRFGRVATDLRVSVIDKCN 90
Query: 107 VYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
+ C +C M + ++S+ + + E+ TGG+PL+ L+ +
Sbjct: 91 LRCTYCMPADGMPWLPQAQLMSADEIRRIVRVAVHSLGAEELRITGGEPLVRKD--LEHI 148
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----HANHPYEFS- 220
+ +R + + + Q LK+AG H E +
Sbjct: 149 IAGIRADNPDLPISLTTNAVGL------DRRAQALKDAGLNRVNVSLDTLHPETFAELTR 202
Query: 221 ----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
++ +A + AG+ + +VLL+GIND + L+ V + ++
Sbjct: 203 RPHLDKVLAGLQAARAAGLGPIKINAVLLRGINDT--EVVPLVDWAVSNGFEMRFIEDMP 260
Query: 276 L----------AAGTSHFRLTIEEGQKIVASLKEK 300
L R IEE + A + +
Sbjct: 261 LDGDRSWSATNVIPARDIRTAIEEAFTLTADPRGR 295
>gi|82751856|ref|YP_417597.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
RF122]
gi|123741049|sp|Q2YYS8|MOAA_STAAB RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|82657387|emb|CAI81829.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
RF122]
Length = 340
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 65/162 (40%), Gaps = 12/162 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLI 156
+ C C +C +E+ G + ++ A +A + + + ++ TGG+PL+
Sbjct: 20 VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLM 79
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHAN 214
L ++ L I ++ + + ++ Q++ ++ + + +
Sbjct: 80 RRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAID-DTLFQ 136
Query: 215 HPYEFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEI 253
+ +A + ++ A G+ + V+ KGINDD I
Sbjct: 137 SINNCNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQII 178
>gi|21241853|ref|NP_641435.1| molybdenum cofactor biosynthesis protein A [Xanthomonas axonopodis
pv. citri str. 306]
gi|24211979|sp|Q8PNH1|MOAA_XANAC RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|21107234|gb|AAM35971.1| molybdenum cofactor biosynthesis protein A [Xanthomonas axonopodis
pv. citri str. 306]
Length = 334
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 20 VIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS-VGVTKVRLTGGEPLL 78
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L ++ L I+ ++ L + ++ Q +
Sbjct: 79 RRD--LPSLIARLTAIEGIEDLALTTNGTLLARQAV 112
>gi|56419305|ref|YP_146623.1| molybdopterin cofactor biosynthesis protein [Geobacillus
kaustophilus HTA426]
gi|56379147|dbj|BAD75055.1| molybdopterin cofactor biosynthesis protein [Geobacillus
kaustophilus HTA426]
Length = 341
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ ++ A LA + + ++ TGG+PL
Sbjct: 24 VIDQCNFRCVYCMPAEVFGPNFRFLAEDQLLTVEEM-ALLAECFVELGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP--IVDPQRI 192
+ L +++ L I ++ + + + +R+
Sbjct: 83 LRRD--LDALIERLSMIPGLRDVALTTNGIHLVKWAKRL 119
>gi|30263518|ref|NP_845895.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Ames]
gi|47528911|ref|YP_020260.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
'Ames Ancestor']
gi|49186368|ref|YP_029620.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Sterne]
gi|65320845|ref|ZP_00393804.1| COG2896: Molybdenum cofactor biosynthesis enzyme [Bacillus
anthracis str. A2012]
gi|165871039|ref|ZP_02215690.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0488]
gi|167636277|ref|ZP_02394579.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|167640544|ref|ZP_02398806.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0193]
gi|170688439|ref|ZP_02879647.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
gi|170708165|ref|ZP_02898612.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0389]
gi|177652522|ref|ZP_02934989.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0174]
gi|190564908|ref|ZP_03017829.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis
Tsiankovskii-I]
gi|227813602|ref|YP_002813611.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
CDC 684]
gi|229603477|ref|YP_002867763.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0248]
gi|254686135|ref|ZP_05149994.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
CNEVA-9066]
gi|254723532|ref|ZP_05185320.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A1055]
gi|254738607|ref|ZP_05196310.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Western North America USA6153]
gi|254744833|ref|ZP_05202511.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Kruger B]
gi|254752925|ref|ZP_05204961.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Vollum]
gi|254759197|ref|ZP_05211223.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Australia 94]
gi|254811535|sp|C3LA56|MOAA_BACAC RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|30258153|gb|AAP27381.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Ames]
gi|47504059|gb|AAT32735.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
'Ames Ancestor']
gi|49180295|gb|AAT55671.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Sterne]
gi|164713250|gb|EDR18776.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0488]
gi|167511412|gb|EDR86796.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0193]
gi|167528300|gb|EDR91072.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|170126973|gb|EDS95853.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0389]
gi|170667609|gb|EDT18364.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
gi|172082196|gb|EDT67263.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0174]
gi|190564225|gb|EDV18189.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis
Tsiankovskii-I]
gi|227006379|gb|ACP16122.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
CDC 684]
gi|229267885|gb|ACQ49522.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0248]
Length = 338
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C E+ G +LS + E I + ++ TGG+PL
Sbjct: 20 VTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L + V+ + +
Sbjct: 79 LR--RGLPQLIERLNKVDGVEDIGLTTNGS 106
>gi|314934315|ref|ZP_07841674.1| molybdenum cofactor biosynthesis protein A [Staphylococcus caprae
C87]
gi|313652245|gb|EFS16008.1| molybdenum cofactor biosynthesis protein A [Staphylococcus caprae
C87]
Length = 341
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +L+ ++ I + + ++ TGG+PL
Sbjct: 21 VTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFEEMTRISR-IYAELGVKKIRITGGEPL 79
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I+ ++ + +
Sbjct: 80 LRRN--LYQLIEQLNEIEGIEDIGLTTNGL 107
>gi|223042523|ref|ZP_03612572.1| molybdenum cofactor biosynthesis protein A [Staphylococcus capitis
SK14]
gi|222444186|gb|EEE50282.1| molybdenum cofactor biosynthesis protein A [Staphylococcus capitis
SK14]
Length = 341
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +L+ ++ I + + ++ TGG+PL
Sbjct: 21 VTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFEEMTRISR-IYAELGVKKIRITGGEPL 79
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I+ ++ + +
Sbjct: 80 LRRN--LYQLIEQLNEIEGIEDIGLTTNGL 107
>gi|170755099|ref|YP_001781504.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
B1 str. Okra]
gi|226704813|sp|B1IN35|MOAA_CLOBK RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|169120311|gb|ACA44147.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
B1 str. Okra]
Length = 319
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 66/162 (40%), Gaps = 22/162 (13%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E +V + ++ ++ + + ++ FTGG+PLIL
Sbjct: 16 VTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLILKD 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE- 218
+ K++ I ++ + + ++ ++++ LK+ G + I + E
Sbjct: 75 --IDKLIYNTSKINSIKDIAMTTNAILL------EDMVEELKKDGLK-RVNISLDSLKED 125
Query: 219 ----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ + L+ + +V++KGINDD
Sbjct: 126 RFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167
>gi|297244007|ref|ZP_06927897.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8796]
gi|297178785|gb|EFH38030.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8796]
Length = 340
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLI 156
+ C C +C +E+ G + ++ A +A + + + ++ TGG+PL+
Sbjct: 20 VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLM 79
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ L I ++ + +
Sbjct: 80 RRD--LDVLIAKLNQIDGIEDIGLTTNGL 106
>gi|296275048|ref|ZP_06857555.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus MR1]
Length = 340
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLI 156
+ C C +C +E+ G + ++ A +A + + + ++ TGG+PL+
Sbjct: 20 VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLM 79
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ L I ++ + +
Sbjct: 80 RRD--LDVLIAKLNQIDGIEDIGLTTNGL 106
>gi|258422713|ref|ZP_05685618.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9635]
gi|257847124|gb|EEV71133.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9635]
Length = 340
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLI 156
+ C C +C +E+ G + ++ A +A + + + ++ TGG+PL+
Sbjct: 20 VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLM 79
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ L I ++ + +
Sbjct: 80 RRD--LDVLIAKLNQIDGIEDIGLTTNGL 106
>gi|109157586|pdb|2FB2|A Chain A, Structure Of The Moaa Arg17266268ALA TRIPLE MUTANT
gi|109157587|pdb|2FB2|B Chain B, Structure Of The Moaa Arg17266268ALA TRIPLE MUTANT
Length = 340
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLI 156
+ C C +C +E+ G + ++ A +A + + + ++ TGG+PL+
Sbjct: 20 VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLM 79
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ L I ++ + +
Sbjct: 80 RRD--LDVLIAKLNQIDGIEDIGLTTNGL 106
>gi|28211649|ref|NP_782593.1| Fe-S oxidoreductase [Clostridium tetani E88]
gi|28204091|gb|AAO36530.1| Fe-S oxidoreductase [Clostridium tetani E88]
Length = 433
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 79/228 (34%), Gaps = 34/228 (14%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIF 149
+ R LK+ C +C +C + SK+ + + I++ + EV
Sbjct: 139 KDKTRAFLKIQDGCNSFCSYCL-----IPFARGGICSKEPKKVIEEIKKLVEHGFKEVTL 193
Query: 150 TG-GDPLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+G L + + L +L+ + I+ ++ +R S P I LK+
Sbjct: 194 SGIQISLYGNDFQDNWDLITLLEEIDKIEGIERVRIGSISPKYFKDDIIDR-FSNLKKLC 252
Query: 205 KPVYIAIHANHPYEF--------SEEAIAAISRLAN--AGIILLSQSVLLKGI-NDDPEI 253
++++ + +EE + +L G+ + + ++ G + E
Sbjct: 253 PHFHLSLQSGCDETLKRMNRSYTTEEYRYIVQKLREKIKGVSIT--TDIIVGFPGESEEE 310
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
R E+++ ++ +GT + +I + I
Sbjct: 311 FKKTHRFLEEIKLSKMHIFKYSPRSGT--------KAAEIQEQIDGNI 350
>gi|49484483|ref|YP_041707.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus MRSA252]
gi|257423751|ref|ZP_05600180.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257426429|ref|ZP_05602831.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257429068|ref|ZP_05605455.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 68-397]
gi|257431715|ref|ZP_05608078.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus E1410]
gi|257434675|ref|ZP_05610726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M876]
gi|282902170|ref|ZP_06310063.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C160]
gi|282906610|ref|ZP_06314458.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282909580|ref|ZP_06317391.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282911828|ref|ZP_06319624.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282915116|ref|ZP_06322893.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M899]
gi|282920843|ref|ZP_06328561.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C427]
gi|282925748|ref|ZP_06333396.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C101]
gi|283959046|ref|ZP_06376487.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus A017934/97]
gi|293497520|ref|ZP_06665374.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 58-424]
gi|293511095|ref|ZP_06669792.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M809]
gi|293549701|ref|ZP_06672373.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M1015]
gi|295428850|ref|ZP_06821474.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|81650568|sp|Q6GEG6|MOAA_STAAR RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|49242612|emb|CAG41333.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257272769|gb|EEV04871.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257276060|gb|EEV07511.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257279549|gb|EEV10136.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 68-397]
gi|257282594|gb|EEV12726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus E1410]
gi|257285271|gb|EEV15387.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M876]
gi|282312577|gb|EFB42981.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C101]
gi|282315258|gb|EFB45642.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C427]
gi|282320837|gb|EFB51171.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M899]
gi|282323524|gb|EFB53840.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282326559|gb|EFB56861.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282329509|gb|EFB59030.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282596629|gb|EFC01588.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C160]
gi|283788638|gb|EFC27465.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus A017934/97]
gi|290918748|gb|EFD95824.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M1015]
gi|291096451|gb|EFE26709.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 58-424]
gi|291466082|gb|EFF08611.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M809]
gi|295127199|gb|EFG56841.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|312437321|gb|ADQ76392.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus TCH60]
gi|315193523|gb|EFU23919.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus CGS00]
Length = 340
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLI 156
+ C C +C +E+ G + ++ A +A + + + ++ TGG+PL+
Sbjct: 20 VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLM 79
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ L I ++ + +
Sbjct: 80 RRD--LDVLIAKLNQIDGIEDIGLTTNGL 106
>gi|15925258|ref|NP_372792.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Mu50]
gi|156980583|ref|YP_001442842.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Mu3]
gi|255007046|ref|ZP_05145647.2| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Mu50-omega]
gi|24211997|sp|Q931G4|MOAA_STAAM RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|166217891|sp|A7X5J1|MOAA_STAA1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|14248041|dbj|BAB58430.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Mu50]
gi|156722718|dbj|BAF79135.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Mu3]
Length = 340
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLI 156
+ C C +C +E+ G + ++ A +A + + + ++ TGG+PL+
Sbjct: 20 VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLM 79
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ L I ++ + +
Sbjct: 80 RRD--LDVLIAKLNQIDGIEDIGLTTNGL 106
>gi|15927848|ref|NP_375381.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus N315]
gi|21283915|ref|NP_647003.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus MW2]
gi|49487049|ref|YP_044270.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57650853|ref|YP_187068.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus COL]
gi|87161067|ref|YP_494854.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|88196183|ref|YP_501000.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|148268706|ref|YP_001247649.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus JH9]
gi|150394772|ref|YP_001317447.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus JH1]
gi|151222380|ref|YP_001333202.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus str. Newman]
gi|161510463|ref|YP_001576122.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|253314609|ref|ZP_04837822.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus str. CF-Marseille]
gi|253729935|ref|ZP_04864100.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|257794612|ref|ZP_05643591.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9781]
gi|258408785|ref|ZP_05681069.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9763]
gi|258422383|ref|ZP_05685295.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9719]
gi|258439773|ref|ZP_05690519.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9299]
gi|258442671|ref|ZP_05691231.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8115]
gi|258446630|ref|ZP_05694785.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A6300]
gi|258450252|ref|ZP_05698344.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A6224]
gi|258450738|ref|ZP_05698797.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A5948]
gi|258455375|ref|ZP_05703335.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A5937]
gi|262048529|ref|ZP_06021413.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
D30]
gi|262052284|ref|ZP_06024488.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
930918-3]
gi|269203899|ref|YP_003283168.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ED98]
gi|282893707|ref|ZP_06301939.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8117]
gi|282922136|ref|ZP_06329832.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9765]
gi|282926815|ref|ZP_06334442.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A10102]
gi|283767359|ref|ZP_06340274.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus H19]
gi|284025292|ref|ZP_06379690.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 132]
gi|294848805|ref|ZP_06789550.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9754]
gi|295404949|ref|ZP_06814762.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8819]
gi|300910930|ref|ZP_07128380.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus TCH70]
gi|304379453|ref|ZP_07362188.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|54037811|sp|P65389|MOAA_STAAW RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|54041471|sp|P65388|MOAA_STAAN RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|66773819|sp|P69848|MOAA_STAA8 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|81648816|sp|Q6G754|MOAA_STAAS RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|81693942|sp|Q5HDT9|MOAA_STAAC RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|123722359|sp|Q2FEM4|MOAA_STAA3 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|172049050|sp|A6QJA8|MOAA_STAAE RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|189028696|sp|A6U3Z2|MOAA_STAA2 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|189028697|sp|A5IV50|MOAA_STAA9 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|189028698|sp|A8Z366|MOAA_STAAT RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|52695872|pdb|1TV7|A Chain A, Structure Of The S-Adenosylmethionine Dependent Enzyme
Moaa
gi|52695873|pdb|1TV7|B Chain B, Structure Of The S-Adenosylmethionine Dependent Enzyme
Moaa
gi|52695874|pdb|1TV8|A Chain A, Structure Of Moaa In Complex With S-Adenosylmethionine
gi|52695875|pdb|1TV8|B Chain B, Structure Of Moaa In Complex With S-Adenosylmethionine
gi|109157588|pdb|2FB3|A Chain A, Structure Of Moaa In Complex With 5'-Gtp
gi|109157589|pdb|2FB3|B Chain B, Structure Of Moaa In Complex With 5'-Gtp
gi|13702068|dbj|BAB43360.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus N315]
gi|21205357|dbj|BAB96051.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus MW2]
gi|49245492|emb|CAG43969.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57285039|gb|AAW37133.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus COL]
gi|87127041|gb|ABD21555.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|87203741|gb|ABD31551.1| molybdopterin cofactor biosynthesis protein A, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147741775|gb|ABQ50073.1| GTP cyclohydrolase subunit MoaA [Staphylococcus aureus subsp.
aureus JH9]
gi|149947224|gb|ABR53160.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus JH1]
gi|150375180|dbj|BAF68440.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus str. Newman]
gi|160369272|gb|ABX30243.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253726382|gb|EES95111.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|257788584|gb|EEV26924.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9781]
gi|257840468|gb|EEV64928.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9763]
gi|257841814|gb|EEV66251.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9719]
gi|257847549|gb|EEV71551.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9299]
gi|257851792|gb|EEV75726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8115]
gi|257854698|gb|EEV77646.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A6300]
gi|257856344|gb|EEV79253.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A6224]
gi|257861521|gb|EEV84323.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A5948]
gi|257862586|gb|EEV85354.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A5937]
gi|259159803|gb|EEW44843.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
930918-3]
gi|259163387|gb|EEW47945.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
D30]
gi|262076189|gb|ACY12162.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ED98]
gi|282591266|gb|EFB96339.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A10102]
gi|282593604|gb|EFB98597.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9765]
gi|282763765|gb|EFC03893.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8117]
gi|283461238|gb|EFC08322.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus H19]
gi|285817930|gb|ADC38417.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
04-02981]
gi|294824184|gb|EFG40608.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9754]
gi|294969894|gb|EFG45912.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8819]
gi|298695526|gb|ADI98748.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ED133]
gi|300887910|gb|EFK83105.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus TCH70]
gi|304341985|gb|EFM07889.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|312830616|emb|CBX35458.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315129647|gb|EFT85638.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus CGS03]
gi|315198198|gb|EFU28529.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus CGS01]
gi|329314952|gb|AEB89365.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus T0131]
gi|329723623|gb|EGG60152.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 21172]
gi|329730314|gb|EGG66704.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 21193]
gi|329732017|gb|EGG68372.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 21189]
Length = 340
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLI 156
+ C C +C +E+ G + ++ A +A + + + ++ TGG+PL+
Sbjct: 20 VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLM 79
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ L I ++ + +
Sbjct: 80 RRD--LDVLIAKLNQIDGIEDIGLTTNGL 106
>gi|115709894|ref|XP_783948.2| PREDICTED: similar to MGC84142 protein [Strongylocentrotus
purpuratus]
gi|115954658|ref|XP_001192455.1| PREDICTED: similar to MGC84142 protein [Strongylocentrotus
purpuratus]
Length = 669
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 91/226 (40%), Gaps = 25/226 (11%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R+ + + + L C + C++C E V S K +LS+++ LA + + ++
Sbjct: 91 QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILH-LAKLFVSEGVDKIRL 149
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
TGG+PL+ + ++++ LR ++ ++ + + + + + LK+AG + I
Sbjct: 150 TGGEPLVRKD--IVEIIEGLRELEGLKQIAMTTNGVTLAKR------LPALKKAGLDL-I 200
Query: 210 AIHANH--PYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGINDDPEILANLM 258
I + P +F + GI + V+++G+N+D +
Sbjct: 201 NISIDTLVPQKFEFISRRKGWHHVMRGIDAALEHGYDPVKVNCVVMRGLNEDELCDFVAL 260
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
L I+ D +T + +IV +++ +
Sbjct: 261 TEDKALDIRFIEYMPFDGNRWNDKKLITKD---EIVQTIRGRFPDF 303
>gi|226223665|ref|YP_002757772.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
Clip81459]
gi|254823680|ref|ZP_05228681.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J1-194]
gi|254853066|ref|ZP_05242414.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL R2-503]
gi|254992565|ref|ZP_05274755.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J2-064]
gi|255521212|ref|ZP_05388449.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J1-175]
gi|259495866|sp|C1L1W8|MOAA_LISMC RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|225876127|emb|CAS04833.1| Putative molybdenum cofactor biosynthesis protein A [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258606413|gb|EEW19021.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL R2-503]
gi|293592902|gb|EFG00663.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J1-194]
Length = 333
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|16803087|ref|NP_464572.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
EGD-e]
gi|47096135|ref|ZP_00233735.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
str. 1/2a F6854]
gi|224502639|ref|ZP_03670946.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL R2-561]
gi|254830184|ref|ZP_05234839.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
10403S]
gi|254898780|ref|ZP_05258704.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
J0161]
gi|254911731|ref|ZP_05261743.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
J2818]
gi|254936057|ref|ZP_05267754.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
F6900]
gi|255029181|ref|ZP_05301132.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
LO28]
gi|284801379|ref|YP_003413244.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
08-5578]
gi|284994521|ref|YP_003416289.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
08-5923]
gi|24211990|sp|Q8Y870|MOAA_LISMO RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|16410449|emb|CAC99125.1| lmo1047 [Listeria monocytogenes EGD-e]
gi|47015484|gb|EAL06417.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
str. 1/2a F6854]
gi|258608646|gb|EEW21254.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
F6900]
gi|284056941|gb|ADB67882.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
08-5578]
gi|284059988|gb|ADB70927.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
08-5923]
gi|293589681|gb|EFF98015.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
J2818]
Length = 333
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|289434309|ref|YP_003464181.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289170553|emb|CBH27093.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 333
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + I K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSQDEIVGFME-IMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|224500308|ref|ZP_03668657.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
Finland 1988]
Length = 333
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|163942456|ref|YP_001647340.1| molybdenum cofactor biosynthesis protein A [Bacillus
weihenstephanensis KBAB4]
gi|163864653|gb|ABY45712.1| molybdenum cofactor biosynthesis protein A [Bacillus
weihenstephanensis KBAB4]
Length = 337
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 28/191 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFTGGDP 154
++ C + C +C E+ G + I+ + ++ TGG+P
Sbjct: 20 VIDRCNLRCTYCMPAEVFGPD--YAFLKDEFLLTFDEIERLAKVFVSIGVRKIRLTGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
L+ L K+++ L I + + + + Q + LKEAG
Sbjct: 78 LLRKD--LAKLIERLVKIDGLVDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDA 129
Query: 212 -------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
N ++ + I AG+ + V+ KG+ND + E
Sbjct: 130 IDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDHQVLPVATYFK--EQ 187
Query: 265 RIKPYYLHHPD 275
I ++ D
Sbjct: 188 GITLRFIEFMD 198
>gi|313624269|gb|EFR94317.1| molybdenum cofactor biosynthesis protein A [Listeria innocua FSL
J1-023]
Length = 333
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|290893803|ref|ZP_06556782.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J2-071]
gi|290556630|gb|EFD90165.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J2-071]
Length = 333
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|229152925|ref|ZP_04281107.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1550]
gi|228630538|gb|EEK87185.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1550]
Length = 339
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 77/217 (35%), Gaps = 31/217 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LTKLIARLVKIDGLIDIGLTTNAVHLTKQ------AKALKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ N ++ I I AG+ + V+ KG+ND + E
Sbjct: 133 DDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDHQVLPMAAYFK--EQG 190
Query: 266 IKPYYLHHPDLAAGTSHFR----LTIEEGQKIVASLK 298
I ++ D T+ + +T E +++ +
Sbjct: 191 ITLRFIEFMD-VGSTNGWNFDQVVTKRELIEMIHKMY 226
>gi|218233618|ref|YP_002369523.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
gi|218161575|gb|ACK61567.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
Length = 337
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 77/217 (35%), Gaps = 31/217 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LTKLIARLVKIDGLIDIGLTTNAVHLTKQ------AKALKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ N ++ I I AG+ + V+ KG+ND + E
Sbjct: 131 DDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDHQVLPMAAYFK--EQG 188
Query: 266 IKPYYLHHPDLAAGTSHFR----LTIEEGQKIVASLK 298
I ++ D T+ + +T E +++ +
Sbjct: 189 ITLRFIEFMD-VGSTNGWNFDQVVTKRELIEMIHKMY 224
>gi|46907279|ref|YP_013668.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
serotype 4b str. F2365]
gi|47092939|ref|ZP_00230720.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
str. 4b H7858]
gi|254933405|ref|ZP_05266764.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
HPB2262]
gi|67460888|sp|Q721B9|MOAA_LISMF RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|46880546|gb|AAT03845.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
serotype 4b str. F2365]
gi|47018686|gb|EAL09438.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
str. 4b H7858]
gi|293584966|gb|EFF96998.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
HPB2262]
gi|328466819|gb|EGF37933.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
1816]
gi|332311456|gb|EGJ24551.1| Molybdenum cofactor biosynthesis protein [Listeria monocytogenes
str. Scott A]
Length = 333
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|313609517|gb|EFR85068.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL F2-208]
Length = 333
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|262376486|ref|ZP_06069715.1| molybdenum cofactor biosynthesis protein A [Acinetobacter lwoffii
SH145]
gi|262308625|gb|EEY89759.1| molybdenum cofactor biosynthesis protein A [Acinetobacter lwoffii
SH145]
Length = 341
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 62/175 (35%), Gaps = 15/175 (8%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R ++ + + C C +C K +LS + A ++ I ++ TG
Sbjct: 19 RQKRKLRISVTDRCNFKCSYCMPEHPQWMNKKDLLSFEALYAFCEFMVRH-GIEQIRVTG 77
Query: 152 GDPLIL-SHKRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKE-A 203
G+PL+ L+TL+ I ++ + S + + +L L
Sbjct: 78 GEPLMRQGIIHFIARLQTLKAIG-LKRISMTSNGHYLADYAQPLKRAGLDDLNISLDSLD 136
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
K + + IS AG+ + SVL+KGIND+ I
Sbjct: 137 PKQFQQLTQ----KQLQP-VLQGISAAQQAGLTVKINSVLIKGINDNQIIPLVKW 186
>gi|288940317|ref|YP_003442557.1| molybdenum cofactor biosynthesis protein A [Allochromatium vinosum
DSM 180]
gi|288895689|gb|ADC61525.1| molybdenum cofactor biosynthesis protein A [Allochromatium vinosum
DSM 180]
Length = 328
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 60/161 (37%), Gaps = 21/161 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C + G ++ LS ++ E +A + V TGG+PL+
Sbjct: 21 VTDRCDLRCGYCLPKGFKGFEEPAHWLSFEEIERVVAAFTA-LGVRRVRLTGGEPLMR-- 77
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP-----QRINPELIQCLKEAGKPVYIAIHAN 214
+ L ++ L + + L S ++ R + ++ P
Sbjct: 78 RGLTELAARLSALPGLDDLSLSSNATQLESLAGPLARAGVRRLNVSLDSLNPEVF----- 132
Query: 215 HPYEFS----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + E I+ AG+ + +V+++G+ND
Sbjct: 133 --RQITGGDLERVRRGIAAAREAGMEPIRVNTVVMRGVNDT 171
>gi|16800108|ref|NP_470376.1| molybdenum cofactor biosynthesis protein A [Listeria innocua
Clip11262]
gi|24211995|sp|Q92CY2|MOAA_LISIN RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|16413498|emb|CAC96270.1| lin1039 [Listeria innocua Clip11262]
Length = 333
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|319400639|gb|EFV88864.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis FRI909]
Length = 340
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDDYTFLPKDELLTFEELTR-ISKIYAQLGVKKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ + L K+++ L I ++ + + LK+ GK +Y
Sbjct: 79 LRRN--LYKLIEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLY 116
>gi|326791229|ref|YP_004309050.1| RNA modification enzyme, MiaB family [Clostridium lentocellum DSM
5427]
gi|326541993|gb|ADZ83852.1| RNA modification enzyme, MiaB family [Clostridium lentocellum DSM
5427]
Length = 435
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTG 151
R+ +K+ C YC +C + + S+ E + + + + E+I TG
Sbjct: 144 RTRVYVKVQEGCNNYCSYC-----IIPYTRGKIRSRKEEQVVEEVTKLVGLGFKEIILTG 198
Query: 152 GDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
L L + L ++LK + I+ V+ +R S P+ I E I LKE K
Sbjct: 199 IHVLAYGKDLGNTDLIQLLKRVHEIEGVERIRMSSIEPVA----ITDEFIYALKEMPK-- 252
Query: 208 YIAIHA 213
+ H
Sbjct: 253 -VCHHF 257
>gi|294627927|ref|ZP_06706506.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292597841|gb|EFF41999.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 343
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 29 VIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS-VGVTKVRLTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L ++ L I+ ++ L + ++ Q +
Sbjct: 88 RRD--LPSLIARLTAIEGIEDLALTTNGTLLARQAV 121
>gi|56478522|ref|YP_160111.1| molybdenum cofactor biosynthesis protein A [Aromatoleum aromaticum
EbN1]
gi|56314565|emb|CAI09210.1| Molybdenum cofactor biosynthesis protein A [Aromatoleum aromaticum
EbN1]
Length = 359
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 65/182 (35%), Gaps = 22/182 (12%)
Query: 85 PLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAAL 135
P G + DR + + + C C +C R + G+ + +LS ++
Sbjct: 23 PTDGPLKDRRDRAVQDLRISVTDRCNFRCIYCMPRSVFGADYPFLPRKELLSFEEITRIA 82
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI------VDP 189
+ ++ TGG+PL+ K ++ +++ L I V+ L + +
Sbjct: 83 RRF-ATRGVRKIRITGGEPLLR--KHVENLIEMLAQIPDVE-LTLTTNGVLLPKMARTLK 138
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248
+ L P + N + I+ +AG+ + V+ +G+N
Sbjct: 139 DAGLDRVTISLDAIDDPTFRL--MNDADFPVAAVLEGIAAAKDAGLGPIKVNMVVKRGVN 196
Query: 249 DD 250
D
Sbjct: 197 DQ 198
>gi|314935815|ref|ZP_07843167.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
subsp. hominis C80]
gi|313656380|gb|EFS20120.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
subsp. hominis C80]
Length = 340
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +L+ + +A + + + ++ TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFDEITT-IAKVYAELGVKKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L K+++ L I+ ++ + +
Sbjct: 79 LRRD--LYKLIEKLNRIEGIEDIGLTTNGL 106
>gi|226304301|ref|YP_002764259.1| molybdenum cofactor biosynthesis protein MoaA [Rhodococcus
erythropolis PR4]
gi|226183416|dbj|BAH31520.1| molybdenum cofactor biosynthesis protein MoaA [Rhodococcus
erythropolis PR4]
Length = 352
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 74/224 (33%), Gaps = 26/224 (11%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +LS ++ + + I EV FTGG+PL+ S
Sbjct: 42 ITEKCSLRCTYCMPEEGLEAIASQDLLSVEEIVRVVGVGVDLVGIREVRFTGGEPLMRSD 101
Query: 160 --KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
+ + + I L + + R L + H
Sbjct: 102 LESIIAGCARRVPGIP----LSITTNA-VGLEHRAAKLAAAGLSRVNVSLDSVDRV-HFA 155
Query: 218 EFS-----EEA-IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
E + + A L +VL++ + +L+R ++ ++ ++
Sbjct: 156 ELTRRDRLPSVLAGIRAAAAAGLAPLKVNAVLMR---ETLHGAVDLLRWCLDAGVELRFI 212
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
L A + R ++ +++ L ++L+ G
Sbjct: 213 EQMPLDADRAWVRESMVTAVELLDELSGH--------FVLEAIG 248
>gi|121598421|ref|YP_993796.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
SAVP1]
gi|124385812|ref|YP_001028740.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
NCTC 10229]
gi|126451180|ref|YP_001081354.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
NCTC 10247]
gi|242314341|ref|ZP_04813357.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1106b]
gi|251767263|ref|ZP_02266560.2| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
PRL-20]
gi|254178129|ref|ZP_04884784.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
ATCC 10399]
gi|254357683|ref|ZP_04973956.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
2002721280]
gi|121227231|gb|ABM49749.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
SAVP1]
gi|124293832|gb|ABN03101.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
NCTC 10229]
gi|126244050|gb|ABO07143.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
NCTC 10247]
gi|148026810|gb|EDK84831.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
2002721280]
gi|160699168|gb|EDP89138.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
ATCC 10399]
gi|242137580|gb|EES23982.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1106b]
gi|243063305|gb|EES45491.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
PRL-20]
Length = 363
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 29/194 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 36 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 94
Query: 156 ILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLK 201
+ + L+ +++ L + V + + ++ R+ L L
Sbjct: 95 LRKN--LEFLIERLANMTTVDGRPLDITLTTNGSLLMRKAKSLRDAGLSRVTVSL-DALD 151
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A + L + V+ +G ND + + R F
Sbjct: 152 DTLFKRMNDADFASADVLDGIFAAHAAGL----APVKVNMVVKRGTND--AEIVPMARRF 205
Query: 262 VELRIKPYYLHHPD 275
+ ++ + D
Sbjct: 206 KGTGVVLRFIEYMD 219
>gi|53720059|ref|YP_109045.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei K96243]
gi|53725728|ref|YP_102316.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
ATCC 23344]
gi|254199210|ref|ZP_04905576.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
FMH]
gi|254205515|ref|ZP_04911867.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
JHU]
gi|254296849|ref|ZP_04964302.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 406e]
gi|52210473|emb|CAH36456.1| putative molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei K96243]
gi|52429151|gb|AAU49744.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
ATCC 23344]
gi|147748806|gb|EDK55880.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
FMH]
gi|147752958|gb|EDK60023.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
JHU]
gi|157807170|gb|EDO84340.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 406e]
Length = 360
Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 29/194 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 33 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 91
Query: 156 ILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLK 201
+ + L+ +++ L + V + + ++ R+ L L
Sbjct: 92 LRKN--LEFLIERLANMTTVDGRPLDITLTTNGSLLMRKAKSLRDAGLSRVTVSL-DALD 148
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A + L + V+ +G ND + + R F
Sbjct: 149 DTLFKRMNDADFASADVLDGIFAAHAAGL----APVKVNMVVKRGTND--AEIVPMARRF 202
Query: 262 VELRIKPYYLHHPD 275
+ ++ + D
Sbjct: 203 KGTGVVLRFIEYMD 216
>gi|229093829|ref|ZP_04224927.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-42]
gi|228689562|gb|EEL43371.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-42]
Length = 339
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|227514963|ref|ZP_03945012.1| molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus
fermentum ATCC 14931]
gi|227086662|gb|EEI21974.1| molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus
fermentum ATCC 14931]
Length = 332
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + + + C + C +C +E + VLS + + + + +V T
Sbjct: 10 RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGVHKVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
GG+PL+ + +++ ++ I ++ + +
Sbjct: 69 GGEPLLRTDVV--DIVRRIKEIDGIEDVSITTNGL 101
>gi|282917614|ref|ZP_06325366.1| LOW QUALITY PROTEIN: molybdenum cofactor biosynthesis protein A
[Staphylococcus aureus subsp. aureus D139]
gi|282318576|gb|EFB48934.1| LOW QUALITY PROTEIN: molybdenum cofactor biosynthesis protein A
[Staphylococcus aureus subsp. aureus D139]
Length = 217
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLI 156
+ C C +C +E+ G + ++ A +A + + + ++ TGG+PL+
Sbjct: 20 VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLM 79
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ L I ++ + +
Sbjct: 80 RRD--LDVLIAKLNQIDGIEDIGLTTNGL 106
>gi|84622616|ref|YP_449988.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|84366556|dbj|BAE67714.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv.
oryzae MAFF 311018]
Length = 343
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 29 VIEACNFRCGYCMPADRVPDDYGFDSRQRLSFDQLETLVRAFVS-VGVTKVRLTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L ++ L I+ ++ L + ++ Q +
Sbjct: 88 RRD--LPSLIARLTAIEGIEDLALTTNGTLLARQAV 121
>gi|184155556|ref|YP_001843896.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum
IFO 3956]
gi|260662959|ref|ZP_05863852.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum
28-3-CHN]
gi|226704822|sp|B2GCN4|MOAA_LACF3 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|183226900|dbj|BAG27416.1| molybdopterin precursor synthase MoaA [Lactobacillus fermentum IFO
3956]
gi|260552580|gb|EEX25580.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum
28-3-CHN]
Length = 332
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + + + C + C +C +E + VLS + + + + +V T
Sbjct: 10 RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGVHKVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
GG+PL+ + +++ ++ I ++ + +
Sbjct: 69 GGEPLLRTDVV--DIVRRIKEIDGIEDVSITTNGL 101
>gi|42783913|ref|NP_981160.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10987]
gi|42739843|gb|AAS43768.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10987]
Length = 334
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 17 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLARLFVS-IGVRKIRLTGGEPL 75
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 76 LRKD--LTKLIARLMKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 127
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 128 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 172
>gi|291549884|emb|CBL26146.1| GTP cyclohydrolase subunit MoaA [Ruminococcus torques L2-14]
Length = 329
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 51/134 (38%), Gaps = 11/134 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +L+ + E I + I ++ TGG+PL+
Sbjct: 16 VTDRCNLRCVYCMPEEGIEQLPHEQILTFDEIERVCR-ISTELGISKIKLTGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
K L +L ++ I ++ + + I+ +++ + Q L + I + E
Sbjct: 73 KGLPDLLGKIKRIPGIEQVTLTTNG-ILLKNQLDELMRQGLDA------VNISIDTLDET 125
Query: 220 SEEAIAAISRLANA 233
+ L A
Sbjct: 126 CYHTVTRCGELNQA 139
>gi|167903657|ref|ZP_02490862.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei NCTC 13177]
Length = 370
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 29/194 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLK 201
+ + L+ +++ L + V + + ++ R+ L L
Sbjct: 102 LRKN--LEFLIERLANMTTVDGRPLDITLTTNGSLLMRKAKSLRDAGLSRVTVSL-DALD 158
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A + L + V+ +G ND + + R F
Sbjct: 159 DTLFKRMNDADFASADVLDGIFAAHAAGL----APVKVNMVVKRGTND--AEIVPMARRF 212
Query: 262 VELRIKPYYLHHPD 275
+ ++ + D
Sbjct: 213 KGTGVVLRFIEYMD 226
>gi|320352978|ref|YP_004194317.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
DSM 2032]
gi|320121480|gb|ADW17026.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
Length = 350
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 30/216 (13%), Positives = 66/216 (30%), Gaps = 35/216 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I ++ C + C C + S + + L I + V+ +GG+
Sbjct: 5 PKWIAWEITRRCNLRCVHCRSSSQLEIDGHPDFSLTEAKRVLNEIHAYANPV-VVLSGGE 63
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL+ + +L ++I + + + E + +K++G +
Sbjct: 64 PLLRPDVFEIAAHGTSLG----LRIC-LATNGSL-----VTAETCRDIKQSGIRMVSLSL 113
Query: 213 ANHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
E ++ I I L S K + + +L+++
Sbjct: 114 DGSTAEVHDDFRNQPGAFAGVMNAIRLFNEHQIDFLINSSFTKRNKAEAPKIYHLVKSL- 172
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+YL + G++I+ L
Sbjct: 173 --GATAWYLFMI----------VPTGRGEEIMEELI 196
>gi|160901857|ref|YP_001567438.1| molybdenum cofactor biosynthesis protein A [Petrotoga mobilis SJ95]
gi|189028692|sp|A9BF51|MOAA_PETMO RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|160359501|gb|ABX31115.1| molybdenum cofactor biosynthesis protein A [Petrotoga mobilis SJ95]
Length = 323
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 92/233 (39%), Gaps = 32/233 (13%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y I + C + C +C + V ++L ++ + + + I
Sbjct: 1 MIDKYGRSIDYLRVSITDRCNLRCIYCMPPQGVTFKTHSSILRYEEIIKIVE-VGTELGI 59
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+V TGG+PL+ + + ++K LR I ++ + + ++ P+ LK AG
Sbjct: 60 KKVRITGGEPLVR--QGVVNLIKELRKIPELEDITMTTNGVLL------PKYAFALKRAG 111
Query: 205 KPVYIAIHANHPYEFSEEAIAAISR---LANA--GI---------ILLSQSVLLKGINDD 250
+ + I+R + A GI + +V++KGIND+
Sbjct: 112 LSRVNI----SLDSLNPDTYKTITRRGEFSQAIEGIKAALEVGLNPVKINTVVMKGINDN 167
Query: 251 PEILANLMRTFVELRIKP-YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
+ +L ++ Y+ + + + ++ +++ E ++I+ +
Sbjct: 168 ELENFVNLTIDKDLHVRFIEYMPMGETSLLSGNYYVSLNEFKEIIIDKMGMVP 220
>gi|254250659|ref|ZP_04943978.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia cenocepacia
PC184]
gi|124879793|gb|EAY67149.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia cenocepacia
PC184]
Length = 393
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 81/226 (35%), Gaps = 48/226 (21%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C RE G+ + SS+ A L I + ++ TGG+PL+
Sbjct: 67 VIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEPLL 126
Query: 157 LSHKRLQKVLKTLRYIKHVQ----ILRFHSRV-----------------PIVDPQRINPE 195
+ L+ +++ L + V + + V ++
Sbjct: 127 RRN--LEALIERLATLTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSLDALDDA 184
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEIL 254
L + + +A PV +A I AG + +V+ +G+NDD +
Sbjct: 185 LFRRMSDADVPV-------------ARVLAGIEAAHAAGLAPVKVNAVIERGMNDDQ--I 229
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
L+R F + ++ + D G S + + ++++
Sbjct: 230 LPLVRHFRHTGVAVRFIEYMD-VGGASFWSGDKVVPAARMRELIDE 274
>gi|312795515|ref|YP_004028437.1| molybdenum cofactor biosynthesis protein A [Burkholderia
rhizoxinica HKI 454]
gi|312167290|emb|CBW74293.1| Molybdenum cofactor biosynthesis protein A [Burkholderia
rhizoxinica HKI 454]
Length = 372
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
R+ IP EL+ +P P H + + D + + C C +C R +
Sbjct: 12 RRVIPL-NELSAVPAFSSAPGAPRGHVIDR-LARPLRDLRIS-VTDRCNFRCVYCMPRTV 68
Query: 118 VGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
G +L+ ++ E + ++ TGG+PL+ K L+++++ L +
Sbjct: 69 FGRDYPFLPHSALLTFEEIERVARLFVA-QGVEKIRLTGGEPLLR--KHLERLIERLAAL 125
>gi|254736837|ref|ZP_05194543.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Western North America USA6153]
Length = 247
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 28 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 86
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 87 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 138
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 139 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 183
>gi|228917377|ref|ZP_04080930.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228842304|gb|EEM87399.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 339
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|229124294|ref|ZP_04253485.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
95/8201]
gi|228659195|gb|EEL14844.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
95/8201]
Length = 339
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|196043992|ref|ZP_03111229.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB108]
gi|225866714|ref|YP_002752092.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
gi|196025328|gb|EDX63998.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB108]
gi|225787425|gb|ACO27642.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
Length = 337
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|196040891|ref|ZP_03108189.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
NVH0597-99]
gi|301056234|ref|YP_003794445.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI]
gi|196028345|gb|EDX66954.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
NVH0597-99]
gi|300378403|gb|ADK07307.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar
anthracis str. CI]
Length = 337
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|167633892|ref|ZP_02392215.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|170685934|ref|ZP_02877157.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
gi|254687534|ref|ZP_05151390.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
CNEVA-9066]
gi|254725099|ref|ZP_05186882.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A1055]
gi|254741872|ref|ZP_05199559.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Kruger B]
gi|167530693|gb|EDR93395.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|170670398|gb|EDT21138.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
Length = 337
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|196032982|ref|ZP_03100395.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
gi|218905955|ref|YP_002453789.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
gi|195994411|gb|EDX58366.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
gi|218538708|gb|ACK91106.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
Length = 337
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|118479860|ref|YP_897011.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
str. Al Hakam]
gi|118419085|gb|ABK87504.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al
Hakam]
Length = 339
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|49478739|ref|YP_038771.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|228936036|ref|ZP_04098846.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|49330295|gb|AAT60941.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|228823804|gb|EEM69626.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 339
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|52140778|ref|YP_086052.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
gi|51974247|gb|AAU15797.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
Length = 337
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|315281772|ref|ZP_07870331.1| molybdenum cofactor biosynthesis protein A [Listeria marthii FSL
S4-120]
gi|313614582|gb|EFR88167.1| molybdenum cofactor biosynthesis protein A [Listeria marthii FSL
S4-120]
Length = 333
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|225175612|ref|ZP_03729606.1| Radical SAM domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225168941|gb|EEG77741.1| Radical SAM domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 336
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 73/214 (34%), Gaps = 37/214 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I C + C+ C+R G+++ LS+++ + + I + + +I +GG+PL+
Sbjct: 3 ISWNTTWECHLKCKHCYRDA--GAKRSEELSTEEGKKLIDEIAK-AGFKILILSGGEPLL 59
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
L K++ F + I PE+ Q LK++G +
Sbjct: 60 REDIYELTAYAKSVG-----LRPVFGTTGTT-----ITPEIAQKLKDSGAMCIGISLDSA 109
Query: 216 PYEFSEEAIAA----------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
E +E + + G+ + +++ + E + +L VE
Sbjct: 110 GAEIHDEFRQVPGSWQGAIDGMKNCKDVGLPFQIHTTVVEQNYHEFEAITDLA---VEKG 166
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
+ +++ F + +
Sbjct: 167 AQAHHVF----------FLVPTGRALDMEEEALR 190
>gi|255658493|ref|ZP_05403902.1| molybdenum cofactor biosynthesis protein A [Mitsuokella multacida
DSM 20544]
gi|260849292|gb|EEX69299.1| molybdenum cofactor biosynthesis protein A [Mitsuokella multacida
DSM 20544]
Length = 329
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEV 147
RY +I L C + CR+C E V + +L + + + + +V
Sbjct: 4 RYQRKIEYVRISLTDRCNLRCRYCMPEEGVEKLRHEDILRFDEIVRIVRALAS-LGVRKV 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
TGG+PLI + + ++++ + + ++ + + ++
Sbjct: 63 RLTGGEPLIRRN--IVELVREIHAVPGIETIAMTTNGVML 100
>gi|296185249|ref|ZP_06853659.1| radical SAM domain protein [Clostridium carboxidivorans P7]
gi|296050083|gb|EFG89507.1| radical SAM domain protein [Clostridium carboxidivorans P7]
Length = 328
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 68/208 (32%), Gaps = 29/208 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G + L+++ + + I + + +IF+GG+PL+
Sbjct: 4 VSWNTTNKCNMYCSHCYRDS--GKKYKEELTTEQGKKLIDEIAK-AGFKMMIFSGGEPLM 60
Query: 157 LSH-KRLQKVLKTLRYIK------HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
L + L I + L ++ + I L K
Sbjct: 61 RKDIFELIQYASDLGVIPVLGSNGTLITLDIAKKLKKAGAKSIGISLDSL--NEEKHNRF 118
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H N + + AG+ + ++K ++ + + V++ +
Sbjct: 119 RSHENAWK----YTVQGMENCKEAGLKFQVHTTVMKWNKEEILDITDFA---VKIGASAH 171
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASL 297
++ F + G +I
Sbjct: 172 HIF----------FLVPTGRGNEIEEQA 189
>gi|255524292|ref|ZP_05391250.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
gi|255511975|gb|EET88257.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
Length = 328
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 68/208 (32%), Gaps = 29/208 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G + L+++ + + I + + +IF+GG+PL+
Sbjct: 4 VSWNTTNKCNMYCSHCYRDS--GKKYKEELTTEQGKKLIDEIAK-AGFKMMIFSGGEPLM 60
Query: 157 LSH-KRLQKVLKTLRYIK------HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
L + L I + L ++ + I L K
Sbjct: 61 RKDIFELIQYASDLGVIPVLGSNGTLITLDIAKKLKKAGAKSIGISLDSL--NEEKHNRF 118
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H N + + AG+ + ++K ++ + + V++ +
Sbjct: 119 RSHENAWK----YTVQGMENCKEAGLKFQVHTTVMKWNKEEILDITDFA---VKIGASAH 171
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASL 297
++ F + G +I
Sbjct: 172 HIF----------FLVPTGRGNEIEEQA 189
>gi|228927225|ref|ZP_04090288.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229121710|ref|ZP_04250933.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
95/8201]
gi|228661754|gb|EEL17371.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
95/8201]
gi|228832551|gb|EEM78125.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 337
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 59/162 (36%), Gaps = 18/162 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALA-YIQEKSQIWEVIFTGGDP 154
++ C C +C E+ G + +L+ + E +I+ + ++ TGG+P
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFIRM--GVNKIRLTGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLKEAGKPVY 208
L+ L ++ L + ++ + + + + L V+
Sbjct: 78 LLRKD--LPHLIARLAKLDGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISLDAIEDHVF 135
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + I AG+ + V+ KG+ND+
Sbjct: 136 KK--INGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDN 175
>gi|170702587|ref|ZP_02893460.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
IOP40-10]
gi|170132498|gb|EDT00953.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
IOP40-10]
Length = 372
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 42/255 (16%), Positives = 85/255 (33%), Gaps = 55/255 (21%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C R+ G + SS+ A L I + ++ TGG+PL+
Sbjct: 46 VIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAFISLGVEKIRLTGGEPLL 105
Query: 157 LSHKRLQKVLKTLRYIKHVQ----ILRFHSRV-----------------PIVDPQRINPE 195
+ L +++ L + V + + V I+
Sbjct: 106 RRN--LGALIERLATLTTVDGKPVEIALTTNGSLLAAKARSLRDAGLSRVTVSLDAIDDA 163
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEIL 254
+ + + +A PV +A I AG + +V+ +G NDD +
Sbjct: 164 VFRRMSDADVPV-------------ARVLAGIEAAQAAGLAPVKVNAVIERGANDDQ--I 208
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEGQKIVASLKEKI----SGL-- 304
L+R F + ++ + D G S + + ++++ + + G
Sbjct: 209 LPLVRHFRHSGVAVRFIEYMD-VGGASAWSGDKVVPATRMRELIEASYPLVLVGEPGHDA 267
Query: 305 -CQPFYILDLPGGYG 318
+D G G
Sbjct: 268 TAIRCRHIDGAGEVG 282
>gi|170735545|ref|YP_001774659.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia MC0-3]
gi|169821583|gb|ACA96164.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia MC0-3]
Length = 374
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 80/219 (36%), Gaps = 34/219 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C RE G+ + SS+ A L I + ++ TGG+PL+
Sbjct: 48 VIDQCNFRCGYCMPRESFGTDYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEPLL 107
Query: 157 LSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLKE 202
+ L+ +++ L + V + + ++ R+ L L +
Sbjct: 108 RRN--LEALIERLATLTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSL-DALDD 164
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTF 261
+ N +A I AG + +V+ +G+NDD + L+R F
Sbjct: 165 -----AVFRRMNDADVPVARVLAGIEAAHAAGLAPVKVNAVIERGVNDDQ--ILPLVRHF 217
Query: 262 VELRIKPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
+ ++ + D G S + + ++++
Sbjct: 218 RHTGVAVRFIEYMD-VGGASFWSGDKVVPAARMRELIDE 255
>gi|49187615|ref|YP_030868.1| molybdenum cofactor biosynthesis protein A, N-terminus [Bacillus
anthracis str. Sterne]
gi|49181542|gb|AAT56918.1| molybdenum cofactor biosynthesis protein A, N-terminus [Bacillus
anthracis str. Sterne]
Length = 252
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 33 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 91
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 92 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 143
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 144 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 188
>gi|167720586|ref|ZP_02403822.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei DM98]
gi|167739576|ref|ZP_02412350.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 14]
gi|167816780|ref|ZP_02448460.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 91]
gi|167825186|ref|ZP_02456657.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 9]
gi|167846683|ref|ZP_02472191.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei B7210]
gi|167895272|ref|ZP_02482674.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 7894]
gi|167911906|ref|ZP_02498997.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 112]
gi|167919900|ref|ZP_02506991.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei BCC215]
gi|254191222|ref|ZP_04897726.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei Pasteur 52237]
gi|254195839|ref|ZP_04902265.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei S13]
gi|157938894|gb|EDO94564.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei Pasteur 52237]
gi|169652584|gb|EDS85277.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei S13]
Length = 370
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 29/194 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLK 201
+ + L+ +++ L + V + + ++ R+ L L
Sbjct: 102 LRKN--LEFLIERLANMTTVDGRPLDITLTTNGSLLMRKAKSLRDAGLSRVTVSL-DALD 158
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A + L + V+ +G ND + + R F
Sbjct: 159 DTLFKRMNDADFASADVLDGIFAAHAAGL----APVKVNMVVKRGTND--AEIVPMARRF 212
Query: 262 VELRIKPYYLHHPD 275
+ ++ + D
Sbjct: 213 KGTGVVLRFIEYMD 226
>gi|256830160|ref|YP_003158888.1| Radical SAM domain-containing protein [Desulfomicrobium baculatum
DSM 4028]
gi|256579336|gb|ACU90472.1| Radical SAM domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 399
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 74/208 (35%), Gaps = 28/208 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
I ++ C + C+ C + +G + DT A A I Q+ +IFTGGDP
Sbjct: 55 IAWEVTRSCNLACKHCRAEAHLEPYEGEL----DTAEAKALIDTFPQVGNPIIIFTGGDP 110
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
++ + + L + LR V + I P+ + ++EAG
Sbjct: 111 MMRAD------VYELIRYATDKGLRC---VMSPNGTLITPDTARQMREAGVQRCSISIDG 161
Query: 212 -HANHPYEFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
A EF + ++ I L +AGI + + + + + +L +
Sbjct: 162 PDAESHDEFRGVQGAFDASMRGIQYLKDAGIEFQVNTTVTRANLGSFKKIFDLCE---RI 218
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
+++ + + GQ+
Sbjct: 219 GAVAWHIFLLVPTGRAAQLGAEVITGQE 246
>gi|228474586|ref|ZP_04059317.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
SK119]
gi|228271249|gb|EEK12617.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
SK119]
Length = 340
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +L+ + +A + + + ++ TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFDEITT-IAKVYAELGVKKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L K+++ L I+ ++ + +
Sbjct: 79 LRRD--LYKLIEKLNRIEGIEDIGMTTNGL 106
>gi|325284885|ref|YP_004264347.1| molybdenum cofactor biosynthesis protein A [Deinococcus
proteolyticus MRP]
gi|324316600|gb|ADY27712.1| molybdenum cofactor biosynthesis protein A [Deinococcus
proteolyticus MRP]
Length = 332
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 34/179 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C + C +C E+ G + +LS ++ E + + ++ TGG+PL
Sbjct: 17 VTDRCNLRCTYCMPAEVFGPDYAFLPQSELLSFEEIERVSRVMVG-LGVQKLRLTGGEPL 75
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + L ++ L I+ VQ L + ++ P LK AG
Sbjct: 76 LR--RELPMLVAQLARIEGVQDLAMTTNGLLL------PRFAAELKAAGLQRVTV----S 123
Query: 216 PYEFSEEAIAAISRL--------------ANAGIILLSQSVLLKGINDD--PEILANLM 258
E ++ L +AG+ + +V+ +G ND E L
Sbjct: 124 LDALDAETFGQMNGLGVSPEKVLAGIDAALSAGLGVKLNTVVKRGANDAGLAEFWRELR 182
>gi|317125385|ref|YP_004099497.1| radical SAM protein [Intrasporangium calvum DSM 43043]
gi|315589473|gb|ADU48770.1| Radical SAM domain protein [Intrasporangium calvum DSM 43043]
Length = 400
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 23/202 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGG 152
P ++ ++ C + C C R + + L+++ L I + V+ TGG
Sbjct: 21 PMIVIWEVTRACALVCLHC-RADAQHRRNPHELTTEQGRTLLDDIAAWGAPYPIVVLTGG 79
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAI 211
DP L L ++H + H + R+ PE++ L+ AG + +++
Sbjct: 80 DPFERPD------LAEL--VRHGSSIGLHMALSPSVTPRLTPEVLAELRAAGAGALSLSL 131
Query: 212 HANHPYE---------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
N + + A + +AG L S + + L +L+RT +
Sbjct: 132 DGNTAATHDAFRGVPGVFDATLRAAQDVRDAGFRLQINSTV---TQANVHELPDLLRTVI 188
Query: 263 ELRIKPYYLHHPDLAAGTSHFR 284
+L + + R
Sbjct: 189 DLGASLWSVFFLVPTGRGEMLR 210
>gi|126454258|ref|YP_001067111.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1106a]
gi|217420454|ref|ZP_03451959.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 576]
gi|226197916|ref|ZP_03793490.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei Pakistan 9]
gi|254259569|ref|ZP_04950623.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1710a]
gi|126227900|gb|ABN91440.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1106a]
gi|217395866|gb|EEC35883.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 576]
gi|225930104|gb|EEH26117.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei Pakistan 9]
gi|254218258|gb|EET07642.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1710a]
Length = 377
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 29/194 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 50 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 108
Query: 156 ILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLK 201
+ + L+ +++ L + V + + ++ R+ L L
Sbjct: 109 LRKN--LEFLIERLANMTTVDGRPLDITLTTNGSLLMRKAKSLRDAGLSRVTVSL-DALD 165
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A + L + V+ +G ND + + R F
Sbjct: 166 DTLFKRMNDADFASADVLDGIFAAHAAGL----APVKVNMVVKRGTND--AEIVPMARRF 219
Query: 262 VELRIKPYYLHHPD 275
+ ++ + D
Sbjct: 220 KGTGVVLRFIEYMD 233
>gi|301627665|ref|XP_002942990.1| PREDICTED: molybdenum cofactor biosynthesis protein 1-like [Xenopus
(Silurana) tropicalis]
Length = 649
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V + L + ALA + + + ++
Sbjct: 69 GRQHNYLRISL---TEKCNLRCQYCMPEEGVQLTPKSELLTTQEIVALARLFVQEGVNKI 125
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ LR ++ ++ + +
Sbjct: 126 RLTGGEPLIRPDVV--DIVAQLRKLEGLKTIALTTNGI 161
>gi|113461174|ref|YP_719243.1| molybdenum cofactor biosynthesis protein A [Haemophilus somnus
129PT]
gi|112823217|gb|ABI25306.1| GTP cyclohydrolase subunit MoaA [Haemophilus somnus 129PT]
Length = 338
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 82/269 (30%), Gaps = 59/269 (21%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAALAYIQEKSQIWEVI 148
+Y L + +C C +C + L+ + + + + +V
Sbjct: 20 QRKYYYLRLS-VTDMCNFRCNYCLPHGYRSESTKPSFLNLVEIKRLVNAFAQ-LGTEKVR 77
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----------------- 191
TGG+P L L +++ +R I+ ++ + + + Q
Sbjct: 78 ITGGEP-TLRKDFLS-IVENIRAIETIKNIALTTNGYKMARQVEDWKKAGISAINVSVDS 135
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
++P++ + K I + +E E + SVL+K +ND
Sbjct: 136 LDPKMFHAITGVDKFHDIMRGIDRAFEIGYE-------------KIKVNSVLMKSLNDKE 182
Query: 252 EILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLT--------IEEGQKIVASLKEKIS 302
+ ++++ L ++A + L+ I EG I +
Sbjct: 183 FDQFLMWVKERPIQMRFIELMQTGEMAQFFHQYHLSGQILAEKLIREGWSIQKKERA--- 239
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
G KV ++G
Sbjct: 240 ------------DGPAKVFAHPDYKGEIG 256
>gi|325919115|ref|ZP_08181174.1| GTP cyclohydrolase subunit MoaA [Xanthomonas gardneri ATCC 19865]
gi|325550424|gb|EGD21219.1| GTP cyclohydrolase subunit MoaA [Xanthomonas gardneri ATCC 19865]
Length = 344
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 57/188 (30%), Gaps = 26/188 (13%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 29 VIEACNFRCGYCMPADRVPDDYGFDAQQRLSFDQLETLVRAFVS-VGVTKVRLTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L ++ L I ++ L + ++ Q + L++AG
Sbjct: 88 RRD--LPSLVARLTAIDGIEDLALTTNGTLLARQAV------ALRQAGLRRITV----SM 135
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E +S ++ + + + + + ++ +
Sbjct: 136 DALDPELFRRMS---------GNRGEIAQVLAGIAAAEQAGFQRLKINCVVQRGINEDQV 186
Query: 277 AAGTSHFR 284
HFR
Sbjct: 187 LPLVEHFR 194
>gi|254787119|ref|YP_003074548.1| molybdenum cofactor biosynthesis protein A [Teredinibacter turnerae
T7901]
gi|237684680|gb|ACR11944.1| molybdenum cofactor biosynthesis protein A [Teredinibacter turnerae
T7901]
Length = 327
Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 42/136 (30%), Gaps = 11/136 (8%)
Query: 87 KGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +Y R + C C +C LS + A
Sbjct: 5 PTLTDQYQRRFTYLRLSVTDACNFRCNYCLPDGYSCDSDEPNLSIPEIAAVANAFALN-G 63
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
++ TGG+P + L +++ + ++ + S RI L +
Sbjct: 64 TKKIRITGGEPTLRKD--LAEIIHVCKTTPGIESVALTSNG-----YRITRLLPSLVDAG 116
Query: 204 GKPVYIAIHANHPYEF 219
+ ++ + HP +F
Sbjct: 117 LDQLNLSADSLHPAQF 132
>gi|71908225|ref|YP_285812.1| GTP cyclohydrolase subunit MoaA [Dechloromonas aromatica RCB]
gi|71847846|gb|AAZ47342.1| GTP cyclohydrolase subunit MoaA [Dechloromonas aromatica RCB]
Length = 327
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQI 144
+ R+ RI + C + C +C + G ++ LS + E + + + +
Sbjct: 6 LTDRFGRRIEYLRLSVTDRCDLRCAYCMPSDFSGYEEPEHWLSFDEIERLVG-LFARFGL 64
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
V TGG+PL+ K L + + ++ I V+ L +
Sbjct: 65 RRVRLTGGEPLMR--KGLAGLARRIKAIPGVEDLSLSTNGT 103
>gi|196232689|ref|ZP_03131540.1| Radical SAM domain protein [Chthoniobacter flavus Ellin428]
gi|196223149|gb|EDY17668.1| Radical SAM domain protein [Chthoniobacter flavus Ellin428]
Length = 368
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 9/157 (5%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
D +A +P EL L R + I + + Y + +VC VYC+FC
Sbjct: 28 EDALALYLLPLV-ELGELANRRRNLIKQDAFDGRGNDIVTYIIDRNINYTNVCNVYCKFC 86
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ VLS + + L + + ++ GG + L L +I
Sbjct: 87 AFYRTEKDEDHYVLSHEQLDQKLDELSAIGGVQ-ILLQGG---HHPKLDIDWYLAMLSHI 142
Query: 173 ----KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
H+ I F + L + + + +
Sbjct: 143 REKYPHINIHGFSPPEFNHFSEVFQMPLREVIAKFKE 179
>gi|218887708|ref|YP_002437029.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218758662|gb|ACL09561.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 427
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 38/236 (16%), Positives = 79/236 (33%), Gaps = 31/236 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAY----IQEKSQIWEVI 148
R+ + + C + C +C R+ ++ ++S AL Y + +I +
Sbjct: 23 GRVHVPVAPRCNIQCGYCNRKYDCVNESRPGVTSAVLSPRQALDYVDKVLAADPRITVIG 82
Query: 149 FTG-GDPLILSHKRLQ----------KVLKTLRY-----IKHVQILR-FHSRVPIVDPQR 191
G GDP+ + L+ ++L L H+ L+ V
Sbjct: 83 IAGPGDPMANPAETLETLRLVHERHPELLFCLSSNGLGLPPHLDRLKELGVTHVTVTINA 142
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++P + + L + + E + ++ L G+++ ++L+ G+ND
Sbjct: 143 VDPAIGEKLYSWVRDDKVVWRGREAAELLLARQLESVRGLVERGMVVKVNTILVPGVNDR 202
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK----EKIS 302
R EL + A T L + +V + + IS
Sbjct: 203 HVEEVA--RVVGELGATIQNIIPLKPTADTPLAHLPEPDA-AVVNAARKGAGGHIS 255
>gi|325290323|ref|YP_004266504.1| SSU ribosomal protein S12P methylthiotransferase [Syntrophobotulus
glycolicus DSM 8271]
gi|324965724|gb|ADY56503.1| SSU ribosomal protein S12P methylthiotransferase [Syntrophobotulus
glycolicus DSM 8271]
Length = 442
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 75/214 (35%), Gaps = 30/214 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+K+ C C +C ++ GS + + + +A++ E + E+I T D
Sbjct: 147 AYIKIAEGCNNRCSYCVIPQIKGSYRSR--TKESILGEVAWLAE-QGVKEIIVTAQDTTR 203
Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
L +L + I ++ +R P+ ELI+ +++ K Y+
Sbjct: 204 YGMDIYQGLELANLLAAIAEIDGIEWIRL----LYCYPEVFTDELIEVMRKEPKICKYLD 259
Query: 211 IHANHPY-----EFS-----EEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMR 259
I H E + ++ I++L A ++ ++ + G + E A L
Sbjct: 260 IPLQHANNKILTEMNRRYLKQDVERLINKLRKAIPDIVLRTTFITGFPGEGEEEYAELQN 319
Query: 260 -----TFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
F L + Y A ++ E
Sbjct: 320 FVREMKFDRLGVFAYSREENTPAGMRKD-QVPEE 352
>gi|206975055|ref|ZP_03235969.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|229138875|ref|ZP_04267455.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST26]
gi|206746476|gb|EDZ57869.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|228644606|gb|EEL00858.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST26]
Length = 337
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 66/165 (40%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G+ + +LS + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP---VYIAIH 212
+ L +++ L ++ ++ + + + Q + LKEAG + +
Sbjct: 79 LRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLDAI 130
Query: 213 ANHPYE-------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+H ++ ++ + I AG+ + V+ KG+ND
Sbjct: 131 EDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|282165058|ref|YP_003357443.1| hypothetical protein MCP_2388 [Methanocella paludicola SANAE]
gi|282157372|dbj|BAI62460.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 398
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 23/185 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ H C + C C GS+ L S++ A + + + + +I TGG+
Sbjct: 58 PRQVFWEVTHACNLRCLHCVTSS--GSKDNDELDSQEAFALIDRLADMKVFY-LIITGGE 114
Query: 154 PLILSHKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
P + +L+ LR H+ ++ + ++D ++ L L+ + V I
Sbjct: 115 PFLRPD-----ILELLR---HISTKNMMVKVDTNGTLIDDDAVDELL--SLRLSSIQVSI 164
Query: 210 AIHANHPYEFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
F + A I RL GI + + + + +L
Sbjct: 165 DGIGGSHDRFRGKKGTYKAACGTIERLIKKGIPTNITTTVTRQNLSGLNAVIDLAVRLHC 224
Query: 264 LRIKP 268
I
Sbjct: 225 NGITI 229
>gi|224538617|ref|ZP_03679156.1| hypothetical protein BACCELL_03511 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519751|gb|EEF88856.1| hypothetical protein BACCELL_03511 [Bacteroides cellulosilyticus
DSM 14838]
Length = 498
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 43/264 (16%), Positives = 86/264 (32%), Gaps = 37/264 (14%)
Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY--PDRILLKLLHVCPVYCRFCFR 114
+ IP + ++ P + Y P + L L + C +CR+C+
Sbjct: 102 RQLIIPVERAGTEYRFQKLPPCTPTGMTVDTCTRRLYSGPLLLTLMLTNRCMAHCRYCYA 161
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
Q S + E + ++ GG+ + +L L ++H
Sbjct: 162 DTRTQVQNWLPTSR--ILELIREAAELP-VQQINLIGGEIFLHKD--WDIILAEL--VRH 214
Query: 175 -VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP------YEFSEEAIAAI 227
++ +++P E ++ LK+ I + + S ++ A
Sbjct: 215 GIEPEFISTKIP------FTEECLRKLKQTHYKNLIQVSLDAIDTTVLVQSLSVDSSYAS 268
Query: 228 SRLANAGIILLSQSVL-------LKGINDDPEILANLMR------TFVELRIKPYYLHHP 274
+ G+ +L QS L L N DP L +L R + R+ P
Sbjct: 269 EMMR--GLRMLDQSGLPYQVSSVLTTYNCDPRTLTDLFRFLSTLKNLHDWRLTPVSNSTT 326
Query: 275 DLAAGTSHFRLTIEEGQKIVASLK 298
G + + + ++ I L+
Sbjct: 327 TKYPGFADLKPSHQKISDIFRFLQ 350
>gi|254446971|ref|ZP_05060438.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
HTCC5015]
gi|198263110|gb|EDY87388.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
HTCC5015]
Length = 329
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C LS + + + + +V TGG+PL+
Sbjct: 19 VTDRCDLRCRYCMPEGFSDYHVPDHWLSVDEWLHLVGALAR-GGVQKVRITGGEPLLR-- 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L ++++ + I+ ++ + +
Sbjct: 76 RELPELIEGISQIEGIEDIALSTNGV 101
>gi|75760857|ref|ZP_00740872.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228967829|ref|ZP_04128843.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar sotto str. T04001]
gi|74491671|gb|EAO54872.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228791879|gb|EEM39467.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 339
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LTKLIARLVKIDGLIDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|169235987|ref|YP_001689187.1| coenzyme PQQ synthesis protein E [Halobacterium salinarum R1]
gi|167727053|emb|CAP13838.1| homolog to coenzyme PQQ synthesis protein E [Halobacterium
salinarum R1]
Length = 365
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 68/215 (31%), Gaps = 23/215 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C + + LS+ + + L V+ +GGD
Sbjct: 19 PVVLVWEVTQACALACDHCRASARP-QRHPSELSTAEGKQLLTDAAAFGDGQLVVLSGGD 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210
PL T+ ++H V + P I+ L +AG +
Sbjct: 78 PLARPD--------TVELVEHGTDCGLRMTVTPSGTASLTPTAIEALADAGVAQFAVSID 129
Query: 211 -IHANHPYEFSEEAIAAISRLANA------GIILLSQSVLLKGINDDPEILANLMRTFVE 263
EF EA + L A G+ L + + + + +L+
Sbjct: 130 GATPTTHDEFRGEAGSFERTLRAARAIRELGVPLQVNTTVCADTVEALPAIRDLVAEL-- 187
Query: 264 LRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASL 297
+ + + ++ ++++A L
Sbjct: 188 -GVALWSVFFLVPVGRGRALDPVSPARAEEVMAWL 221
>gi|113868543|ref|YP_727032.1| molybdenum cofactor biosynthesis protein A [Ralstonia eutropha H16]
gi|113527319|emb|CAJ93664.1| molybdopterin biosynthesis protein [Ralstonia eutropha H16]
Length = 374
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 81/248 (32%), Gaps = 29/248 (11%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRR 115
IP + L P + G+V R L + + C C +C +
Sbjct: 5 VIPIFD-LRDHRYRSMTPSIPGKLAAPTGLVADTRGRPLHDLRISVTDRCNFRCVYCMPK 63
Query: 116 EMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
E+ +LS ++ E + ++ TGG+PL+ + ++ +++ L
Sbjct: 64 EVFDKDYTFLPHSELLSFEEIERTARLFVAH-GVEKIRLTGGEPLLRKN--IEHLVEMLA 120
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-------IHANHPYEFSEEA 223
I+ V + + + + L++AG +
Sbjct: 121 KIETVSGKPLD--LTLTTNASLLARKARALRDAGLTRVSVSLDAIDDATFRRMNDVDFAV 178
Query: 224 IAAISRL---ANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ + G + V+ +G ND + + + R F I ++ D
Sbjct: 179 ADVLHGIETAQAVGLAPIKVNMVVKRGTND--QEIVPMARHFRNSGIILRFIEFMD-VGA 235
Query: 280 TSHFRLTI 287
++H+++
Sbjct: 236 SNHWQMDE 243
>gi|15790256|ref|NP_280080.1| coenzyme PQQ synthesis protein [Halobacterium sp. NRC-1]
gi|10580720|gb|AAG19560.1| coenzyme PQQ synthesis protein [Halobacterium sp. NRC-1]
Length = 356
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 68/215 (31%), Gaps = 23/215 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C + + LS+ + + L V+ +GGD
Sbjct: 10 PVVLVWEVTQACALACDHCRASARP-QRHPSELSTAEGKQLLTDAAAFGDGQLVVLSGGD 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210
PL T+ ++H V + P I+ L +AG +
Sbjct: 69 PLARPD--------TVELVEHGTDCGLRMTVTPSGTASLTPTAIEALADAGVAQFAVSID 120
Query: 211 -IHANHPYEFSEEAIAAISRLANA------GIILLSQSVLLKGINDDPEILANLMRTFVE 263
EF EA + L A G+ L + + + + +L+
Sbjct: 121 GATPTTHDEFRGEAGSFERTLRAARAIRELGVPLQVNTTVCADTVEALPAIRDLVAEL-- 178
Query: 264 LRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASL 297
+ + + ++ ++++A L
Sbjct: 179 -GVALWSVFFLVPVGRGRALDPVSPARAEEVMAWL 212
>gi|226311193|ref|YP_002771087.1| molybdenum cofactor biosynthesis protein A [Brevibacillus brevis
NBRC 100599]
gi|254811536|sp|C0Z9B3|MOAA_BREBN RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|226094141|dbj|BAH42583.1| molybdenum cofactor biosynthesis protein A [Brevibacillus brevis
NBRC 100599]
Length = 339
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 64/172 (37%), Gaps = 38/172 (22%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C CR+C ++ G + +L+ ++ I + ++ TGG+PL
Sbjct: 20 VTDKCNFRCRYCMPADIFGPDFEFLPQSKLLTFEEITRLTQ-IFTSLGVGKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPEL-------IQ 198
+ + L ++++ +R ++ VQ + + ++ R+ L
Sbjct: 79 MRRN--LPELIRMIREVEGVQDIAMTTNGSLLSRHAQALKEAGLDRVTVSLDSLDNERFG 136
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
L G V + + I A+AG+ + V+ +G+ND
Sbjct: 137 MLNGRGYQV-------------DSVLDGIRVAADAGLSIKINMVVQRGVNDQ 175
>gi|221201327|ref|ZP_03574366.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2M]
gi|221208807|ref|ZP_03581805.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2]
gi|221214113|ref|ZP_03587086.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD1]
gi|221166290|gb|EED98763.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD1]
gi|221171263|gb|EEE03712.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2]
gi|221178595|gb|EEE11003.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2M]
Length = 370
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 16/88 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE+ G +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPREVFGKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ + L+ +++ L R +R
Sbjct: 102 LRKN--LEFLIERLA--------RLTTR 119
>gi|313619543|gb|EFR91216.1| molybdenum cofactor biosynthesis protein A [Listeria innocua FSL
S4-378]
Length = 120
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
V TGG+PL+ + + ++++ L I ++ + + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNAMYLAK 105
>gi|161525364|ref|YP_001580376.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
gi|189349899|ref|YP_001945527.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
gi|160342793|gb|ABX15879.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
gi|189333921|dbj|BAG42991.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
Length = 370
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 16/88 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE+ G +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPREVFGKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ + L+ +++ L R +R
Sbjct: 102 LRKN--LEFLIERLA--------RLTTR 119
>gi|39995358|ref|NP_951309.1| BchE/P-methylase family protein [Geobacter sulfurreducens PCA]
gi|39982120|gb|AAR33582.1| BchE/P-methylase family protein [Geobacter sulfurreducens PCA]
Length = 428
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 23/210 (10%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
RY ++ CP C FC V G +D + LA I+ + V
Sbjct: 157 RRYLTTQTVQASRGCPYDCSFCT----VTPYFGRTFRYRDPDDILAEIRSFRRKLVVFLD 212
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
D L+ + + +L+ L + +R+ S+ + + +PEL++ + ++G
Sbjct: 213 --DNLLGDPAKARPILRGLAEM----NVRWGSQTNLRFAE--DPELLKLVADSGCIGLFV 264
Query: 211 -------IHANHPYEFSEEA-IAAISRLANAGIILLSQSVLLKGINDDPE-ILANLMRTF 261
HAN + + + R+ +AGIIL + ++ G +D E + +R
Sbjct: 265 GIESVTGAHANMAKSGTRYSQADLMKRVRDAGIILE--TSIIFGFDDHDESVFETTVRFL 322
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
E H GT+ FR EEG+
Sbjct: 323 EECSPSVPTFHILTPYPGTALFRQFQEEGR 352
>gi|326389860|ref|ZP_08211424.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus JW
200]
gi|325994128|gb|EGD52556.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus JW
200]
Length = 455
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 57/156 (36%), Gaps = 26/156 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S+D + L ++ S E++ TG
Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++K + I ++ +R S P + E I L +
Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFLTEEFVKE-IANLPKMC 271
Query: 205 KPVYIAIHANHPYEF--------SEEAIAAISRLAN 232
+ ++++ + ++E + I RL
Sbjct: 272 RHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLRE 307
>gi|307266431|ref|ZP_07547967.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306918539|gb|EFN48777.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 455
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 57/156 (36%), Gaps = 26/156 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S+D + L ++ S E++ TG
Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++K + I ++ +R S P + E I L +
Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFLTEEFVKE-IANLPKMC 271
Query: 205 KPVYIAIHANHPYEF--------SEEAIAAISRLAN 232
+ ++++ + ++E + I RL
Sbjct: 272 RHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLRE 307
>gi|256751980|ref|ZP_05492850.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus
CCSD1]
gi|320116201|ref|YP_004186360.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|256749185|gb|EEU62219.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus
CCSD1]
gi|319929292|gb|ADV79977.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 455
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 57/156 (36%), Gaps = 26/156 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S+D + L ++ S E++ TG
Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++K + I ++ +R S P + E I L +
Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFLTEEFVKE-IANLPKMC 271
Query: 205 KPVYIAIHANHPYEF--------SEEAIAAISRLAN 232
+ ++++ + ++E + I RL
Sbjct: 272 RHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLRE 307
>gi|167039974|ref|YP_001662959.1| MiaB-like tRNA modifying protein [Thermoanaerobacter sp. X514]
gi|300914064|ref|ZP_07131380.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X561]
gi|307724703|ref|YP_003904454.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X513]
gi|166854214|gb|ABY92623.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X514]
gi|300888999|gb|EFK84145.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X561]
gi|307581764|gb|ADN55163.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X513]
Length = 449
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 57/156 (36%), Gaps = 26/156 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S+D + L ++ S E++ TG
Sbjct: 155 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 209
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++K + I ++ +R S P + E I L +
Sbjct: 210 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFLTEEFVKE-IANLPKMC 265
Query: 205 KPVYIAIHANHPYEF--------SEEAIAAISRLAN 232
+ ++++ + ++E + I RL
Sbjct: 266 RHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLRE 301
>gi|167037786|ref|YP_001665364.1| MiaB-like tRNA modifying protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|166856620|gb|ABY95028.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter
pseudethanolicus ATCC 33223]
Length = 467
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 57/156 (36%), Gaps = 26/156 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S+D + L ++ S E++ TG
Sbjct: 173 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 227
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++K + I ++ +R S P + E I L +
Sbjct: 228 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFLTEEFVKE-IANLPKMC 283
Query: 205 KPVYIAIHANHPYEF--------SEEAIAAISRLAN 232
+ ++++ + ++E + I RL
Sbjct: 284 RHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLRE 319
>gi|116672386|ref|YP_833319.1| radical SAM domain-containing protein [Arthrobacter sp. FB24]
gi|116612495|gb|ABK05219.1| Radical SAM domain protein [Arthrobacter sp. FB24]
Length = 533
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 74/188 (39%), Gaps = 23/188 (12%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q IP + + P+ + L + ++ +L ++ C + C CF
Sbjct: 92 KQHIPDQA-------DNFRPVPEAYAYGLPAMQTQHTCILLQDIIEHCNLRCPTCFTSSG 144
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
Q L+ +E ++ ++ +GG+P + L ++L+ L V+I
Sbjct: 145 PQLQGVAPLAEVLANVDARLARENGRLDVLMLSGGEPTLYP--HLAELLEELVARPIVRI 202
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY----------EFSEEAIAAI 227
+ +S ++ + EL+ L + V + + + P + + AAI
Sbjct: 203 M-VNSNGMLMAT---DDELLALLAKHRDRVEVYLQYDGPSKEASIHHRGGDLTRFKDAAI 258
Query: 228 SRLANAGI 235
SRL+ AG+
Sbjct: 259 SRLSEAGV 266
>gi|324328622|gb|ADY23882.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 337
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLARLFVS-IGVRKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LTKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|294053874|ref|YP_003547532.1| molybdenum cofactor biosynthesis protein A [Coraliomargarita
akajimensis DSM 45221]
gi|293613207|gb|ADE53362.1| molybdenum cofactor biosynthesis protein A [Coraliomargarita
akajimensis DSM 45221]
Length = 335
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 70/185 (37%), Gaps = 16/185 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
L C + C +C +E+ G K L + +A +A + ++ TGG+PL
Sbjct: 17 LTDRCNLRCTYCMPKEVFGPDYVFLKKQEWLRFSELDAVVAAFVR-LGVRKLRLTGGEPL 75
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----YIAI 211
+ L K ++ LR + ++ + + +++ LK +
Sbjct: 76 LRP--GLLKYIEGLRRFEPIEDVALTTNGM-RLAEKVGDLKAAGLKRVTVSLDALDADLC 132
Query: 212 HANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ + + A I AG+ + V+ +G+ND + ++R F + + +
Sbjct: 133 GRMNGRGIGPKVVLAGIDAALKAGLGVKVNMVVERGVND--AEVLPMVRYFKSIGVTLRF 190
Query: 271 LHHPD 275
+ D
Sbjct: 191 IEFMD 195
>gi|330815962|ref|YP_004359667.1| Molybdenum cofactor biosynthesis protein A [Burkholderia gladioli
BSR3]
gi|327368355|gb|AEA59711.1| Molybdenum cofactor biosynthesis protein A [Burkholderia gladioli
BSR3]
Length = 370
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 69/195 (35%), Gaps = 31/195 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE+ +LS ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPREVFDKDYPFLPHSALLSLEELERTARIFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDPQ----------RINPELIQCLK 201
+ + L+ +++ L ++ V L + ++ + R+ L L
Sbjct: 102 LRKN--LEFLIERLARMETVDGRPLDLTLTTNGSLLARKARSLRDAGLTRVTVSL-DALD 158
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRT 260
+ + N S + + I +AG L V+ +G ND + + R
Sbjct: 159 DT-----LFRRMNDADFASADVLEGIFAAQDAGLAPLKVNMVVKRGTND--AEIVPMARR 211
Query: 261 FVELRIKPYYLHHPD 275
F + ++ + D
Sbjct: 212 FRNTGVVLRFIEYMD 226
>gi|229815885|ref|ZP_04446209.1| hypothetical protein COLINT_02941 [Collinsella intestinalis DSM
13280]
gi|229808580|gb|EEP44358.1| hypothetical protein COLINT_02941 [Collinsella intestinalis DSM
13280]
Length = 363
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C C +C + + G +L++++ + I + I V TGG+PL+
Sbjct: 20 VTDKCNFRCVYCMPEKGVPARAHGELLTAEEIARFVR-IVAQEGITRVRLTGGEPLV--S 76
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
R+ +++ +R I ++ + +
Sbjct: 77 HRIVPLIEEIRSISEIEDISLTTNGA 102
>gi|222823704|ref|YP_002575278.1| MiaB-like tRNA modifying enzyme [Campylobacter lari RM2100]
gi|222538926|gb|ACM64027.1| MiaB-like tRNA modifying enzyme [Campylobacter lari RM2100]
Length = 418
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 34/203 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ +K+ C C +C + G + S + + + + EV+ TG +
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKS--RSIPSDEIIKQIKLLAQNGY-SEVVLTGTN 188
Query: 154 --PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
L K L K+L+ + I ++ +R S ++P +I+ + L E ++
Sbjct: 189 IGSYGLKDKTTLGKLLQEIGKINGIKRVRLGS----LEPAQIDESFKEILDEPWLERHLH 244
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
I H +E + + +D + L + L
Sbjct: 245 IALQHTHE------KMLRIMRRR-----------SHTQNDLALFNELSQKGFALGTDFIV 287
Query: 271 LH-------HPDLAAGTSHFRLT 286
H + HF+LT
Sbjct: 288 AHPGESELIWQEALENFKHFKLT 310
>gi|228907890|ref|ZP_04071742.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
IBL 200]
gi|228851785|gb|EEM96587.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
IBL 200]
Length = 333
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 16 VIDRCNFRCTYCMPAEVFGPDYPFLQEELLLTFDEIERLARLFISM-GVNKIRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L ++ L ++ ++ + + + Q R+N L +++
Sbjct: 75 LRKD--LPMLIARLAKLEGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDYVF 131
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ + I AG+ + V+ KG+ND
Sbjct: 132 KKINGRNVN-----TKPVLKGIEAAKAAGLEVKVNMVIKKGMNDS 171
>gi|15896050|ref|NP_349399.1| MoaA/NirJ family Fe-S oxidoreductase [Clostridium acetobutylicum
ATCC 824]
gi|15025835|gb|AAK80739.1|AE007777_3 MoaA/NirJ family Fe-S oxidoreductase [Clostridium acetobutylicum
ATCC 824]
gi|325510204|gb|ADZ21840.1| MoaA/NirJ family Fe-S oxidoreductase [Clostridium acetobutylicum EA
2018]
Length = 335
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 71/214 (33%), Gaps = 35/214 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C ++C C+R G LS+ + + + I + + +IF+GG+PL+
Sbjct: 3 ISWNTTNKCNMHCEHCYRDS--GKGAEGELSTTEGKKLIDEIAK-AGFKIMIFSGGEPLL 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG----------KP 206
+ +++ I S + I E Q LK+AG
Sbjct: 60 RDD--IYELIGYASKIG--LRCVIGSNGTL-----ITLEAAQKLKKAGVMRAGISLDSLK 110
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ E I I L AGI + ++K D+ + + +
Sbjct: 111 AKKHDSFRNYSGAWENTIIGIENLKKAGISFQINTTVMKWNKDEVKDITDFGANL---GA 167
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+++ F + G ++ + K
Sbjct: 168 SAHHVF----------FLVPTGRGAELQEQILSK 191
>gi|301059325|ref|ZP_07200252.1| radical SAM domain protein [delta proteobacterium NaphS2]
gi|300446554|gb|EFK10392.1| radical SAM domain protein [delta proteobacterium NaphS2]
Length = 375
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 75/186 (40%), Gaps = 17/186 (9%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFT 150
+ P + L + + C + CR C+ + + G++ S+K + + + + E+ T
Sbjct: 19 KPPKILTLMVTNGCNLACRHCWPQSVSGTESVASPVSTKTLKEIIRQ-WSRLDLEEICLT 77
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+PL L+ +L+ V+ + + ++ P+ + E + + + V ++
Sbjct: 78 GGEPLTHP-HWLE-ILRFACEQTEVKRVCLQTNATLLKPE--DCEELAGIGKREILVQVS 133
Query: 211 IHANHPYEFS--------EEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRTF 261
+ N E A+ + RL AG L ++V+ L + + LM
Sbjct: 134 LEGNTEAEHDLVRGKGNFLAAVRGMERLVQAG--LGKRTVVALTETRHNFPSIPRLMERL 191
Query: 262 VELRIK 267
+ +
Sbjct: 192 SSMGVG 197
>gi|300869794|ref|YP_003784665.1| molybdenum cofactor biosynthesis protein A [Brachyspira pilosicoli
95/1000]
gi|300687493|gb|ADK30164.1| molybdenum cofactor biosynthesis protein A [Brachyspira pilosicoli
95/1000]
Length = 265
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +LS + + + + +V TGG+PL+ +
Sbjct: 16 VTDRCNLRCVYCMPEEGIEKKTHNEILSYEQIYNVVKE-SAELGVKKVRLTGGEPLVRKN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ +++ +R +K+++ + + I+ P
Sbjct: 75 --IDELVAMIRTLKNIETIAMTTNALILSP 102
>gi|311233095|gb|ADP85949.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
Length = 393
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 30/198 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
I ++ C + C+ C + G S+ + +A + + +IFTGGDP
Sbjct: 49 IAWEVTRSCNLACKHCRAEAHMEPYPGE-FSTDEAKALIDTF---PDVGNPIIIFTGGDP 104
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
++ + L + LR V + I PE Q +K +G +I +
Sbjct: 105 MMRGD------VYELIAYATDKGLRC---VMSPNGTLITPEHAQRMKASGVQ-RCSISID 154
Query: 215 HPYEFSEEA-----------IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P S +A + I L +AGI + + + D+ ++ +
Sbjct: 155 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 211
Query: 264 LRIKPYYLHHPDLAAGTS 281
+ +++ +
Sbjct: 212 IGAVAWHIFLLVPTGRAA 229
>gi|218899882|ref|YP_002448293.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
gi|218545891|gb|ACK98285.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
Length = 337
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LTKLIARLVKIDGLIDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 DDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDQ 175
>gi|120603171|ref|YP_967571.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120563400|gb|ABM29144.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4]
Length = 405
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 30/198 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
I ++ C + C+ C + G S+ + +A + + +IFTGGDP
Sbjct: 61 IAWEVTRSCNLACKHCRAEAHMEPYPGE-FSTDEAKALIDTF---PDVGNPIIIFTGGDP 116
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
++ + L + LR V + I PE Q +K +G +I +
Sbjct: 117 MMRGD------VYELIAYATDKGLRC---VMSPNGTLITPEHAQRMKASGVQ-RCSISID 166
Query: 215 HPYEFSEEA-----------IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P S +A + I L +AGI + + + D+ ++ +
Sbjct: 167 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 223
Query: 264 LRIKPYYLHHPDLAAGTS 281
+ +++ +
Sbjct: 224 IGAVAWHIFLLVPTGRAA 241
>gi|46579268|ref|YP_010076.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448682|gb|AAS95335.1| radical SAM domain protein [Desulfovibrio vulgaris str.
Hildenborough]
Length = 367
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 30/198 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
I ++ C + C+ C + G S+ + +A + + +IFTGGDP
Sbjct: 23 IAWEVTRSCNLACKHCRAEAHMEPYPGE-FSTDEAKALIDTF---PDVGNPIIIFTGGDP 78
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
++ + L + LR V + I PE Q +K +G +I +
Sbjct: 79 MMRGD------VYELIAYATDKGLRC---VMSPNGTLITPEHAQRMKASGVQ-RCSISID 128
Query: 215 HPYEFSEEA-----------IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P S +A + I L +AGI + + + D+ ++ +
Sbjct: 129 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 185
Query: 264 LRIKPYYLHHPDLAAGTS 281
+ +++ +
Sbjct: 186 IGAVAWHIFLLVPTGRAA 203
>gi|168179650|ref|ZP_02614314.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
NCTC 2916]
gi|168184928|ref|ZP_02619592.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
Bf]
gi|237795372|ref|YP_002862924.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
Ba4 str. 657]
gi|259495862|sp|C3KXJ8|MOAA_CLOB6 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|182669280|gb|EDT81256.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
NCTC 2916]
gi|182672020|gb|EDT83981.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
Bf]
gi|229263442|gb|ACQ54475.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
Ba4 str. 657]
Length = 319
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E ++ + ++ ++ + + ++ FTGG+PLIL +
Sbjct: 16 VTDRCNLRCVYCMPPEGIIKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLILKN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE- 218
+ K++ I ++ + + ++ ++++ LK+AG + I + E
Sbjct: 75 --IDKLIYNTSKISSIKDIAMTTNAILL------EDMVEELKKAGLK-RVNISLDSLKED 125
Query: 219 ----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ + L+ + +V++KGINDD
Sbjct: 126 RFKSITRGGDINKVFKSIEKSLSIGMRPIKINTVIMKGINDD 167
>gi|78046661|ref|YP_362836.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78035091|emb|CAJ22736.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. vesicatoria str. 85-10]
Length = 343
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 29 VIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS-VGVTKVRLTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L ++ L I+ ++ L + ++ Q +
Sbjct: 88 RRD--LPSLIARLTAIEGIEDLALTTNGTLLGRQAV 121
>gi|261417406|ref|YP_003251089.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373862|gb|ACX76607.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 330
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 68/225 (30%), Gaps = 44/225 (19%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C+ C++ G K L++ + + I + + +IF+GG+P+
Sbjct: 3 VSWMTTNKCNLTCKHCYQDA--GENKSAELTTDEALKLIDEIAK-AGFKIMIFSGGEPMT 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ L + LR F + + I +L LKEAG
Sbjct: 60 RPD------IVELVAHARERGLRPVFGTNGTL-----ITHDLAFMLKEAG----AMAMGI 104
Query: 215 HPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
+ I AG+ + ++ ++ + M
Sbjct: 105 SVDSIDPARHNDFRGLPNAFELTLMGIENCKAAGLPFQIHTTIMDWNQNEIFDI---MDW 161
Query: 261 FVELRIKPYYLHHPDLAAG-----TSHFRLTIEEGQ--KIVASLK 298
E+ + + R+ EG KI+ +
Sbjct: 162 VKEIGAVNHQIFFLIPVGRGKEIEGHALRVAEYEGLLRKIMEKSR 206
>gi|297584204|ref|YP_003699984.1| molybdenum cofactor biosynthesis protein A [Bacillus
selenitireducens MLS10]
gi|297142661|gb|ADH99418.1| molybdenum cofactor biosynthesis protein A [Bacillus
selenitireducens MLS10]
Length = 339
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 78/213 (36%), Gaps = 28/213 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ K +LS ++ + +++ I ++ TGG+PL
Sbjct: 20 VTDKCNFRCSYCMPPEIFDKYFKFLPKDEILSFEEITRLSTIMVKEAGIRKLRVTGGEPL 79
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ + K++ L I+ V + + ++ R+ L E +
Sbjct: 80 MR--HEVSKLIAMLNKIEGVDDIAMTTNGSLLPKHAKALKEAGLNRVTISLDSLNDEKFR 137
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ N +E + + AG+ + V+ +G+N+D + ++ F +
Sbjct: 138 KI------NGRDVGVQEVLDGVRAAEEAGLGVKMNMVVKRGMNED--DILPMVEYFKDTN 189
Query: 266 IKPYYLHHPDLAAGTS---HFRLTIEEGQKIVA 295
+ ++ D+ ++ +E I+
Sbjct: 190 VILRFIEFMDVGNSNGWKLDHVVSKKEMYHIIN 222
>gi|304406819|ref|ZP_07388474.1| molybdenum cofactor biosynthesis protein A [Paenibacillus
curdlanolyticus YK9]
gi|304344352|gb|EFM10191.1| molybdenum cofactor biosynthesis protein A [Paenibacillus
curdlanolyticus YK9]
Length = 333
Score = 46.8 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 7/108 (6%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKS 142
+ G VH Y + + + C + C +C E V + +LS +
Sbjct: 5 TDRFGRVHNY---LRISVTDRCNLRCVYCMPEEGVQFTDTSNLLSYDHIVELVQS-AASL 60
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ ++ TGG+PL+ L ++ L I + + + ++ Q
Sbjct: 61 GVTKLRITGGEPLVRP--GLDGLISRLSRIPGISDIALTTNGLLLAQQ 106
>gi|242243931|ref|ZP_04798374.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis W23144]
gi|242232564|gb|EES34876.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis W23144]
Length = 340
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDDYTFLPKDELLTFEELTR-ISKIYAQLGVKKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ + L K+++ L I ++ + + LK+ GK +Y
Sbjct: 79 LRRN--LYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLY 116
>gi|254556403|ref|YP_003062820.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum
JDM1]
gi|254045330|gb|ACT62123.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum
JDM1]
Length = 332
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + L + C + C +C +E + VLS + + + +V T
Sbjct: 10 RLHDYVRLSITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLIENFAAM-GVSKVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+PL+ + ++++ ++ + + + + +
Sbjct: 69 GGEPLLRTDVV--EIVRRIKAVDGINDVSITTNGLFLAK 105
>gi|228948475|ref|ZP_04110757.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228811234|gb|EEM57573.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 339
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 24/164 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LAKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMND 176
>gi|28378196|ref|NP_785088.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum
WCFS1]
gi|38258047|sp|Q88WY1|MOAA_LACPL RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|28271031|emb|CAD63936.1| molybdopterin precursor synthase MoaA [Lactobacillus plantarum
WCFS1]
Length = 332
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + L + C + C +C +E + VLS + + + +V T
Sbjct: 10 RLHDYVRLSITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLIENFAAM-GVSKVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+PL+ + ++++ ++ + + + + +
Sbjct: 69 GGEPLLRTDVV--EIVRRIKAVDGINDVSITTNGLFLAK 105
>gi|156554974|ref|XP_001602493.1| PREDICTED: similar to CG33048-PC [Nasonia vitripennis]
Length = 572
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RY + + L C + C +C V K + D +A + + ++ TG
Sbjct: 50 RYHTYLRISLTERCNLRCTYCMPANGVELSKKEDILKTDEIIKIAELFINEGVNKIRLTG 109
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
G+P + + ++ L+ IK ++ L + + Q
Sbjct: 110 GEPTVRKD--IIDIVAQLKSIKGLETLAMTTNGITLTRQ 146
>gi|323463736|gb|ADX75889.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
pseudintermedius ED99]
Length = 340
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +LS ++ + + + +V TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDNYVFLPKNQLLSFEEIVRITK-LYAQLGVKKVRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L +++ + I+ ++ + +
Sbjct: 79 LRRD--LHQLIAQITQIEGIEDIGLTTNGL 106
>gi|313159153|gb|EFR58528.1| menaquinone biosynthesis protein, SCO4494 family [Alistipes sp.
HGB5]
Length = 360
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 69/228 (30%), Gaps = 50/228 (21%)
Query: 93 YPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
Y +R ++ + C CRFC R GS + + ++ E ++ I EV G
Sbjct: 51 YFNRNFHIEPTNRCVFNCRFCSYRRPAGSPEAWDYTMEEIEQIARG-RQGKGITEVHIVG 109
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G + L+ + +R ++ + I EL +++AG
Sbjct: 110 G---VHPDHGLEYYIDMIR-----RVKAILPEAAVKAFTAI--ELSYMIRKAGL------ 153
Query: 212 HANHPYEFSEEAIAAISRLANA--------GIILLSQSVLLKGINDDPEI--LANLMRTF 261
+ RL A G + Q + + D + T
Sbjct: 154 ----------SVEEGLRRLKEAGMEAIPGGGAEIFDQEIRSRICPDKGSTDEWLEVHETA 203
Query: 262 VELRI----KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
L I Y H LA H R + L+++ G
Sbjct: 204 HRLGIPTNATILYGHVEGLAHRIDHLRR--------LRELQDRTGGFN 243
>gi|258514538|ref|YP_003190760.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257778243|gb|ACV62137.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 330
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 73/211 (34%), Gaps = 37/211 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC+ C+R G+ L++ + ++ + I + + +IF+GG+PL+
Sbjct: 3 VSWNTTNACNMYCKHCYRDA--GAAVEEELNTTEGKSLIDEIVK-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ ++++ F + + I E + LK G + + I +
Sbjct: 60 RPD--IFELVEYAAS--QGLRPVFGTNGSL-----ITGETAEKLKACG-ALGMGISLDSI 109
Query: 217 YE-----------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ E A+ + AG+ + ++ D E L + V
Sbjct: 110 KQAEHDRFRATPGAWESAVEGMRNCRAAGLPFQIHTTVMDWNYDQVETLTDFA---VNEG 166
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+++ F + I A
Sbjct: 167 AVAHHIF----------FMVPTGRAVNIEAE 187
>gi|237737408|ref|ZP_04567889.1| molybdenum cofactor biosynthesis protein A [Fusobacterium
mortiferum ATCC 9817]
gi|229421270|gb|EEO36317.1| molybdenum cofactor biosynthesis protein A [Fusobacterium
mortiferum ATCC 9817]
Length = 324
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 101 LLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C++C +++V K +LS ++ + I I ++ TGG+PL+ +
Sbjct: 16 ITDRCNLRCKYCMGDKDIVFLPKDELLSVEEIGRVIK-IFSDLGIKKIRITGGEPLVRRN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
+ +++T+ I+ ++ + + R++ EL
Sbjct: 75 --FRDIVETINNIEDIEEINITTNGI-----RLSEEL 104
>gi|258512763|ref|YP_003186197.1| molybdenum cofactor biosynthesis protein A [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479489|gb|ACV59808.1| molybdenum cofactor biosynthesis protein A [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 341
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 69/213 (32%), Gaps = 34/213 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
L C C +C ++ G ++S + + + + +V TGG+PL
Sbjct: 23 LTDRCNFRCPYCMPSDVFGPDYPFLRPDALMSPDEIAKLVRALVP-LGLEKVRLTGGEPL 81
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + + ++++ + + + + + ++ E LK+AG
Sbjct: 82 LR--REVVEIVEKVAAVPGLHEIAMTTNGSLL-----TREKAMALKKAGLTRITV----S 130
Query: 216 PYEFSEEAIAAISRLA--------------NAG-IILLSQSVLLKGINDDPEILANLMRT 260
+ A ++ + AG + V+ +G N+D +
Sbjct: 131 LDALRPDVAARMNGVRFPVHRVLTAIEAAEEAGLAPVKVNVVVRRGWNEDEVVAIA--ER 188
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
F + ++ + D+ + +I
Sbjct: 189 FRGTGVIVRFIEYMDVGTTNGWRMEDVVTADEI 221
>gi|296502742|ref|YP_003664442.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
gi|296323794|gb|ADH06722.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
Length = 337
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP---VYIAIH 212
+ L ++ L ++ +Q + + + Q + LKEAG + +
Sbjct: 79 LRKD--LSTLIARLTNLEGLQDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLDAI 130
Query: 213 ANHPYE-------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+H ++ ++ + I AG+ + V+ KG+ND
Sbjct: 131 EDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|30020258|ref|NP_831889.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|229043907|ref|ZP_04191603.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
gi|29895808|gb|AAP09090.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|228725438|gb|EEL76699.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
Length = 337
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP---VYIAIH 212
+ L ++ L ++ +Q + + + Q + LKEAG + +
Sbjct: 79 LRKD--LSTLIARLTNLEGLQDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLDAI 130
Query: 213 ANHPYE-------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+H ++ ++ + I AG+ + V+ KG+ND
Sbjct: 131 EDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|294013183|ref|YP_003546643.1| putative radical SAM [Sphingobium japonicum UT26S]
gi|292676513|dbj|BAI98031.1| putative radical SAM [Sphingobium japonicum UT26S]
Length = 382
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--------SQIWE 146
D +LLK+ C + C +C+ +G + ++A L + + + +
Sbjct: 12 DTVLLKVASRCNLDCSYCY-VYHMGDNAWRDQPKQMSDAVLDAVARRLADQYALQAVPFS 70
Query: 147 VIFTGGDPLILSHKRLQKVLKTLR-YIKH 174
V+ GG+PL+L +L++ LR + H
Sbjct: 71 VVLHGGEPLLLGVAKLERFCAKLRDALPH 99
>gi|322418241|ref|YP_004197464.1| Radical SAM domain-containing protein [Geobacter sp. M18]
gi|320124628|gb|ADW12188.1| Radical SAM domain protein [Geobacter sp. M18]
Length = 506
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 24/182 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +CF + + LS+ + L + I +V +GGDPL
Sbjct: 144 LMFSNDCHTNCAYCFAKGHCVPESKQ-LSTGRWKELLRE-AKSLGIEQVTLSGGDPLFRK 201
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC-LKEAGKPVYIAIHAN-HP 216
K+++ L + + ++ + I +L+ + + I N P
Sbjct: 202 DAL--KLIEELIDLD--LLFALSTK--CYITEEIADKLVAIGMTQPVNQYVREIQLNMDP 255
Query: 217 YEFSEE-----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
E + + A+ +I L G + ++V+ ++
Sbjct: 256 DEPTADKLAGSPGYYNRAVVSIRNLLKRGFNVRVKAVVTALTAPYIYEWVE---ELQDMG 312
Query: 266 IK 267
++
Sbjct: 313 VR 314
>gi|256423142|ref|YP_003123795.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis
DSM 2588]
gi|256038050|gb|ACU61594.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis
DSM 2588]
Length = 326
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 84/234 (35%), Gaps = 26/234 (11%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
VH Y L C + C +C E + L D A LA I + + ++
Sbjct: 9 VHDYLRISL---TDNCNLRCFYCMPEEDYDFTPASRLMQADEIATLAGIFTANGVRKIRL 65
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL------RFHSRVPIVDPQRINPELIQCLKEA 203
TGG+PL+ K++ +L + V++ R H +++ I L L
Sbjct: 66 TGGEPLVRKDA--AKIILSLSRLP-VELTMTTNGARLHEFADVLEEAGI-RSLNISLDTL 121
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
++ I + + + I L N GI + V++KG+ND+
Sbjct: 122 QADKFMLITR---RDLFHQVKSNIDLLLNMGIRVKVNVVMMKGLNDNEINDFIAWTKHTP 178
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS----------GLCQP 307
+ ++ TS+ ++++E +++ + + G P
Sbjct: 179 VHVRFIEFMPFSGNRWTSNKVMSLQEILHTISAAYDFLPLKGGPHDTAKGFIVP 232
>gi|319954255|ref|YP_004165522.1| gtp cyclohydrolase subunit moaa [Cellulophaga algicola DSM 14237]
gi|319422915|gb|ADV50024.1| GTP cyclohydrolase subunit MoaA [Cellulophaga algicola DSM 14237]
Length = 327
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + ++ + + + L+ I I ++ TGG+P +
Sbjct: 17 VTDRCNLRCNYCMPSEGIDFAENDKLFTIDELIR-LSQILITQGITKIRITGGEPFVRKD 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
L +L+ L I ++ + + ++ P
Sbjct: 76 --LMVLLRELSKIDALEDISITTNATVIGPY 104
>gi|116749858|ref|YP_846545.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116698922|gb|ABK18110.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 347
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 18/112 (16%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFT 150
+P + +L C + CR C S + + ALA + + EV+FT
Sbjct: 8 FPVLVGWELTLACNLRCRHCA-----SSAGEARSNELTLDEALAICDQLPPLLVLEVVFT 62
Query: 151 GGDPLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLK 201
GG+PL+ + + + LR + HV + + I E+++ L+
Sbjct: 63 GGEPLLSP--HWEAIARRLRELGIHV--------GVVTNGTLITDEMLERLR 104
>gi|329942587|ref|ZP_08291397.1| RNA modification enzyme, MiaB family protein [Chlamydophila
psittaci Cal10]
gi|332287217|ref|YP_004422118.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC]
gi|313847811|emb|CBY16802.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|325506891|gb|ADZ18529.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC]
gi|328815497|gb|EGF85485.1| RNA modification enzyme, MiaB family protein [Chlamydophila
psittaci Cal10]
gi|328914465|gb|AEB55298.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC]
Length = 422
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 20/131 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + S+ + L I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYC-----IIPYLRGRSRSRPVQEILEEISGLVTQGYREVVIAG 188
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL-----KEA 203
GD K L ++ + I ++ +R S +DP+ + +L L
Sbjct: 189 INVGD-YQDQGKSLAYLISQVDEIPGIERIRISS----IDPEDVQDDLRDILLSGKHTCH 243
Query: 204 GKPVYIAIHAN 214
+ + +N
Sbjct: 244 SSHLVLQSGSN 254
>gi|260893438|ref|YP_003239535.1| molybdenum cofactor biosynthesis protein A [Ammonifex degensii KC4]
gi|260865579|gb|ACX52685.1| molybdenum cofactor biosynthesis protein A [Ammonifex degensii KC4]
Length = 316
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILS 158
+ C + CR+C E V + + E + ++ ++I +V TGG+PL+
Sbjct: 10 VTDRCNLRCRYCLPPEGVKTVAHAEILR--FEEIVRIVKAATRIGVRKVRLTGGEPLVRR 67
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ L ++ L I+ + L + ++ Q
Sbjct: 68 N--LSSLVAQLAAIEEIDDLALTTNGILLAEQ 97
>gi|229013933|ref|ZP_04171059.1| Molybdenum cofactor biosynthesis protein A [Bacillus mycoides DSM
2048]
gi|228747353|gb|EEL97230.1| Molybdenum cofactor biosynthesis protein A [Bacillus mycoides DSM
2048]
Length = 339
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 28/191 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFTGGDP 154
++ C + C +C E+ G + I+ + ++ TGG+P
Sbjct: 22 VIDRCNLRCTYCMPAEVFGPD--YAFLKDEFLLTFDEIERLAKVFVSIGVRKIRLTGGEP 79
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
L+ L K+++ L I + + + + Q + LKEAG
Sbjct: 80 LLRKD--LTKLIERLVKIDGLVDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDA 131
Query: 212 -------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
N ++ + I AG+ + V+ KG+ND + E
Sbjct: 132 IDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDHQVLPVATYFK--EQ 189
Query: 265 RIKPYYLHHPD 275
I ++ D
Sbjct: 190 GITLRFIEFMD 200
>gi|229135567|ref|ZP_04264350.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST196]
gi|228647909|gb|EEL03961.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST196]
Length = 339
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 28/191 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFTGGDP 154
++ C + C +C E+ G + I+ + ++ TGG+P
Sbjct: 22 VIDRCNLRCTYCMPAEVFGPD--YAFLKDEFLLTFDEIERLAKVFVSIGVRKIRLTGGEP 79
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
L+ L K+++ L I + + + + Q + LKEAG
Sbjct: 80 LLRKD--LTKLIERLVKIDGLVDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDA 131
Query: 212 -------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
N ++ + I AG+ + V+ KG+ND + E
Sbjct: 132 IDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDHQVLPVATYFK--EQ 189
Query: 265 RIKPYYLHHPD 275
I ++ D
Sbjct: 190 GITLRFIEFMD 200
>gi|229169460|ref|ZP_04297166.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
gi|228614018|gb|EEK71137.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
Length = 339
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 28/191 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFTGGDP 154
++ C + C +C E+ G + I+ + ++ TGG+P
Sbjct: 22 VIDRCNLRCTYCMPAEVFGPD--YAFLKDEFLLTFDEIERLAKVFVSIGVRKIRLTGGEP 79
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
L+ L K+++ L I + + + + Q + LKEAG
Sbjct: 80 LLRKD--LTKLIERLVKIDGLVDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDA 131
Query: 212 -------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
N ++ + I AG+ + V+ KG+ND + E
Sbjct: 132 IDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDHQVLPVATYFK--EQ 189
Query: 265 RIKPYYLHHPD 275
I ++ D
Sbjct: 190 GITLRFIEFMD 200
>gi|134277196|ref|ZP_01763911.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 305]
gi|134250846|gb|EBA50925.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 305]
Length = 377
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 50 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 108
Query: 156 ILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLK 201
+ + L+ +++ L + V + + ++ R+ L L
Sbjct: 109 LRKN--LEFLIERLANMTTVDGRPLDITLTTNGSLLMRKAKSLRDAGLSRVTVSL-DALD 165
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+A A + L + V+ +G ND + + R F
Sbjct: 166 DALFKRMNDADFASADVLDGIFAAHAAGL----APVKVNMVVKRGTND--AEIVPMARRF 219
Query: 262 VELRIKPYYLHHPD 275
+ ++ + D
Sbjct: 220 KGTGVVLRFIEYMD 233
>gi|325000987|ref|ZP_08122099.1| molybdenum cofactor biosynthesis protein A [Pseudonocardia sp. P1]
Length = 352
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 82/208 (39%), Gaps = 15/208 (7%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + + L+ + +A + + E+ FTGG+PL+
Sbjct: 41 LTDRCNLRCTYCMPAEGLDWMPRDEQLTDDELNRLIAVAVHELGVEELRFTGGEPLLR-- 98
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHPYE 218
K L+ VL ++ + + + + E + V + E
Sbjct: 99 KGLENVLSAASSLRPRPDMSLTTNGIGLARR---AESLAAAGVNRLNVSLDTLRPERFAE 155
Query: 219 FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+ ++ + ++ AG+ + +VLL+G+NDD A+L+ + + ++
Sbjct: 156 ITRRDRLQDVLDGMAAAQAAGLSPVKINTVLLRGVNDD--EAADLLEFALAHGYQLRFIE 213
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L A R + ++I+ L+++
Sbjct: 214 QMPLDAQHGWRRSEMITAEEILERLEQR 241
>gi|253582853|ref|ZP_04860072.1| molybdenum cofactor biosynthesis protein A [Fusobacterium varium
ATCC 27725]
gi|251835287|gb|EES63829.1| molybdenum cofactor biosynthesis protein A [Fusobacterium varium
ATCC 27725]
Length = 325
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C++C R M K +L+ ++ + + I K I ++ TGG+PL+ +
Sbjct: 16 VTDRCNLRCQYCMSERNMNFLPKEELLTVEEIKRIVT-IFSKIGIKKIRLTGGEPLVRKN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
++L+ L IK+++ + +
Sbjct: 75 --FTEILENLHSIKNIEEISMTTNGL 98
>gi|229048433|ref|ZP_04194000.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
gi|229130005|ref|ZP_04258969.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-Cer4]
gi|229147295|ref|ZP_04275646.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST24]
gi|228636196|gb|EEK92675.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST24]
gi|228653449|gb|EEL09323.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-Cer4]
gi|228722948|gb|EEL74326.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
Length = 339
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ GS +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEIFGSDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LTKLIARLVKIDGLIDIGLTTNAVHLTKQ------AKALKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|30022797|ref|NP_834428.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|296505191|ref|YP_003666891.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
gi|29898356|gb|AAP11629.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|296326243|gb|ADH09171.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
Length = 337
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ GS +L+ + E LA + + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEIFGSDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LTKLIARLVKIDGLIDIGLTTNAVHLTKQ------AKALKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 DDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 175
>gi|152977087|ref|YP_001376604.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|189028682|sp|A7GU01|MOAA_BACCN RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|152025839|gb|ABS23609.1| molybdenum cofactor biosynthesis protein A [Bacillus cytotoxicus
NVH 391-98]
Length = 337
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 8/95 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLAKLFAG-IGVKKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ L K++K L + + + + + Q
Sbjct: 79 LRKD--LPKLIKRLASLDGITDIGLTTNGIHLTKQ 111
>gi|301166467|emb|CBW26043.1| molybdenum cofactor biosynthesis protein A [Bacteriovorax marinus
SJ]
Length = 328
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 31/165 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C + C +C + + LS + + + K + EV TGG+PL
Sbjct: 34 LTDKCNLRCHYCMPLDATFMDEQRYLSVDEYAQVVEDL-CKFGLEEVRITGGEPL----- 87
Query: 161 RLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-HPYE 218
L+K K+L I + + + V + +L + Y H N
Sbjct: 88 -LRKSFKSLVEKIGSLPLKKIGLTTNAVLLHKYIEDLCE---------YRVHHINISLDS 137
Query: 219 FSEE-------------AIAAISRLANAGIILLSQSVLLKGINDD 250
+E+ + IS +AG+ + +VL+KG+NDD
Sbjct: 138 LNEDRFNKITRSKNFKKVLENISLAKSAGLNIKINTVLMKGVNDD 182
>gi|229062411|ref|ZP_04199727.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH603]
gi|228716882|gb|EEL68569.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH603]
Length = 339
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 28/191 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFTGGDP 154
++ C + C +C E+ G + I+ + ++ TGG+P
Sbjct: 22 VIDRCNLRCTYCMPAEVFGPD--YAFLKDEFLLTFDEIERLAKVFVSIGVRKIRLTGGEP 79
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
L+ L K+++ L I + + + + Q + LKEAG
Sbjct: 80 LLRKD--LTKLIERLVKIDGLVDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDA 131
Query: 212 -------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
N ++ + I AG+ + V+ KG+ND + E
Sbjct: 132 IDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDHQVLPVATYFK--EQ 189
Query: 265 RIKPYYLHHPD 275
I ++ D
Sbjct: 190 GISLRFIEFMD 200
>gi|166710944|ref|ZP_02242151.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 343
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 29 VIEACNFRCGYCMPADRVPDDYGFDSRQRLSFDQLETLVRAFVS-VGVAKVRLTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L ++ L I+ ++ L + ++ Q +
Sbjct: 88 RRD--LPSLIARLTAIEGIEDLALTTNGTLLARQAV 121
>gi|194466736|ref|ZP_03072723.1| molybdenum cofactor biosynthesis protein A [Lactobacillus reuteri
100-23]
gi|194453772|gb|EDX42669.1| molybdenum cofactor biosynthesis protein A [Lactobacillus reuteri
100-23]
Length = 332
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 38/115 (33%), Gaps = 10/115 (8%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C + + ++S + + + +V TGG+PL+
Sbjct: 19 ITDRCNLRCVYCMPAAGLDFFSQDKIMSQDEIVRLVQNFAR-LGVTKVRLTGGEPLLRRD 77
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKEAGKPVY 208
L ++ +R I + + + + + L L VY
Sbjct: 78 --LATIIYRIRQIPEITDISATTNGTALKYQAKGLKEAGLDRLNISLDTFDPEVY 130
>gi|78187401|ref|YP_375444.1| Elongator protein 3/MiaB/NifB [Chlorobium luteolum DSM 273]
gi|78167303|gb|ABB24401.1| GTP cyclohydrolase subunit MoaA [Chlorobium luteolum DSM 273]
Length = 339
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 6/101 (5%)
Query: 87 KGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ R+ RI L +C + C +C R E ++S + A + +
Sbjct: 9 PQLEDRFQRRITYARIALTRLCNLRCSYCMREEHESGTAAAMMSFSEVTAIIRALAAM-G 67
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
I +V TGG+PL+ + + ++ + ++ + +
Sbjct: 68 IKKVRLTGGEPLLRND--ISDIVLAAKQTPGIEKVTLTTNG 106
>gi|237813219|ref|YP_002897670.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei MSHR346]
gi|237506155|gb|ACQ98473.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei MSHR346]
Length = 377
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 29/194 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 50 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 108
Query: 156 ILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLK 201
+ + L+ +++ L + V + + ++ R+ L L
Sbjct: 109 LRKN--LEFLIERLANMTTVDGRPLDITLTTNGSLLMRKAKSLRDAGLSRVTVSL-DALD 165
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A + L + V+ +G ND + + R F
Sbjct: 166 DTLFKRMNDADFASADVLDGIFAAHATGL----APVKVNMVVKRGTND--AEIVPMARRF 219
Query: 262 VELRIKPYYLHHPD 275
I ++ + D
Sbjct: 220 KGTGIVLRFIEYMD 233
>gi|217959681|ref|YP_002338233.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
gi|217066262|gb|ACJ80512.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
Length = 337
Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 63/165 (38%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G+ + +LS + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY------I 209
+ L +++ L ++ ++ + + + Q + LKEAG I
Sbjct: 79 LRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLDAI 130
Query: 210 AIH----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND
Sbjct: 131 EGHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|313226405|emb|CBY21549.1| unnamed protein product [Oikopleura dioica]
Length = 347
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 73/185 (39%), Gaps = 15/185 (8%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIW 145
G H Y L C + CR+C E V + +LS+++ + + + + +
Sbjct: 16 HGRPHDYLRISL---TEKCNLRCRYCMPIEGVKLTPSDQLLSAQELYRFSSLLVKNAGVQ 72
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDP---QRINP---ELI 197
++ TGG+PL+ + +Q+++ L + V+ + + + +R+ +
Sbjct: 73 KIRLTGGEPLVR--REIQEIISDLNSLRDDGVKQIGITTNGVALSKRKAKRLRDAGLDTA 130
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI-LAN 256
+ +P+ + + AI +AGI VL +G+NDD +
Sbjct: 131 NISLDTLEPMKAEFITRRSKDMHYSVMKAIENSIDAGITTKINCVLQRGLNDDEIVDFVK 190
Query: 257 LMRTF 261
+ +
Sbjct: 191 MSKDL 195
>gi|317129637|ref|YP_004095919.1| radical SAM protein [Bacillus cellulosilyticus DSM 2522]
gi|315474585|gb|ADU31188.1| Radical SAM domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 356
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 59/190 (31%), Gaps = 11/190 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C R E LS + +A + I V TGGD
Sbjct: 11 PFIVIWEVTRACALKCLHC-RAEAQYKSDPRELSRNEGKALIDDIASMDNPLFVF-TGGD 68
Query: 154 PLILSH-KRLQKVLKT--LR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
PL+ S L K K L + + + + L + +
Sbjct: 69 PLMRSDLFDLAKYAKEKGLSVSMTPSATPKVTRKAVARAKEVGLSRWAFSLDGSNAEI-- 126
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H + + IS L I + + + K D E +A L+R + +
Sbjct: 127 HDHFRGTKGSFDTTMKGISYLQELNIPIQINTTVSKYNLKDLEHIAELVR---SMNTVLW 183
Query: 270 YLHHPDLAAG 279
+
Sbjct: 184 SVFFLIPTGR 193
>gi|228987980|ref|ZP_04148086.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228771784|gb|EEM20244.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 339
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LTKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|222098198|ref|YP_002532255.1| molybdenum cofactor biosynthesis protein a [Bacillus cereus Q1]
gi|221242256|gb|ACM14966.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus Q1]
Length = 334
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 17 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 75
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 76 LRKD--LTKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 127
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 128 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 172
>gi|206977358|ref|ZP_03238255.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|217962214|ref|YP_002340784.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
gi|206744509|gb|EDZ55919.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|217067222|gb|ACJ81472.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
Length = 337
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LTKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|47565151|ref|ZP_00236194.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
G9241]
gi|47557937|gb|EAL16262.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
G9241]
Length = 337
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 79 LRKD--LTKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 130
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|170717762|ref|YP_001784829.1| molybdenum cofactor biosynthesis protein A [Haemophilus somnus
2336]
gi|168825891|gb|ACA31262.1| molybdenum cofactor biosynthesis protein A [Haemophilus somnus
2336]
Length = 338
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 81/269 (30%), Gaps = 59/269 (21%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAALAYIQEKSQIWEVI 148
+Y L + +C C +C + L+ + + + + +V
Sbjct: 20 QRKYYYLRLS-VTDMCNFRCNYCLPHGYRAESTKPSFLNLVEIKRLVNAFAQ-LGTEKVR 77
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----------------- 191
TGG+P + +++ +R I+ ++ + + + Q
Sbjct: 78 ITGGEPTLRKDFL--SIVENIRAIETIKNIALTTNGYKMARQVEDWKKAGISAINVSVDS 135
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
++P++ + K I + +E E + SVL+K +ND
Sbjct: 136 LDPKMFHAITGVDKFHDIMRGIDRAFEIGYE-------------KIKVNSVLMKSLNDRE 182
Query: 252 EILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLT--------IEEGQKIVASLKEKIS 302
+ ++++ L ++A + L+ I EG I +
Sbjct: 183 FDQFLMWVKERPIQMRFIELMQTGEMAQFFHQYHLSGQILAEKLIREGWSIQKKERA--- 239
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
G KV ++G
Sbjct: 240 ------------DGPAKVFAHPDYKGEIG 256
>gi|229019959|ref|ZP_04176752.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1273]
gi|229026193|ref|ZP_04182557.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1272]
gi|228735121|gb|EEL85752.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1272]
gi|228741343|gb|EEL91550.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1273]
Length = 339
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 26/166 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFTGGDP 154
++ C C +C E+ G + I+ + ++ TGG+P
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPD--YAFLKDEFLLTFDEIERLAKVFVSIGVRKIRITGGEP 79
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
L+ L K++ L I + + + + Q + LKEAG
Sbjct: 80 LLRKD--LTKLIARLVKIDGLVDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDA 131
Query: 212 -------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 132 IDDDIFRNINGRNINTKPVIKGIKAAKEAGLEVKVNMVVKKGMNDH 177
>gi|115954674|ref|XP_001192785.1| PREDICTED: similar to MGC84142 protein, partial [Strongylocentrotus
purpuratus]
Length = 258
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R+ + + + L C + C++C E V S K +LS+++ LA + + ++
Sbjct: 61 QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILH-LAKLFVSEGVDKIRL 119
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
TGG+PL+ + ++++ LR ++ ++ + + +
Sbjct: 120 TGGEPLVRKD--IVEIIEGLRELEGLKQIAMTTNGVTLAK 157
>gi|302541833|ref|ZP_07294175.1| putative radical SAM domain protein [Streptomyces hygroscopicus
ATCC 53653]
gi|302459451|gb|EFL22544.1| putative radical SAM domain protein [Streptomyces himastatinicus
ATCC 53653]
Length = 326
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 52/147 (35%), Gaps = 9/147 (6%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL + CPV C C + + + + ++ V +GG+P +
Sbjct: 20 VLLFITDRCPVGCAHCSVDSRP--DSPRITDHALFASIVDQLAALPELRMVGISGGEPFV 77
Query: 157 LSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L + L HV ++ P+ I + E VY++ A+H
Sbjct: 78 -ERRALALAVTRLAAADKHVV---LYTSGFWARSDHA-PQWIHRVLEQSAAVYLSTDAHH 132
Query: 216 PYEFSEE-AIAAISRLANAGIILLSQS 241
E A +A G+ ++ Q+
Sbjct: 133 VASQGPERFRNAARIIARHGLPIVVQA 159
>gi|227485372|ref|ZP_03915688.1| thiamine biosynthesis protein ThiH [Anaerococcus lactolyticus ATCC
51172]
gi|227236663|gb|EEI86678.1| thiamine biosynthesis protein ThiH [Anaerococcus lactolyticus ATCC
51172]
Length = 472
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L +ED + + K + H+ Y +RI+L + C C +C
Sbjct: 51 SHREAFVLLSCKEDDLNEEIFKLAKDLKHKFYANRIVLFAPLYLSNYCVNGCVYCPYHGQ 110
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
S LS ++ + + +Q++ + G DP+ + + + T+ IKH
Sbjct: 111 NRSIPRKKLSQEEIKEQVIALQDQGHKRLALEAGEDPINNPIDYILESIHTIYNIKHKNG 170
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 171 AIRRVNVNIAATTVENYR 188
>gi|212690793|ref|ZP_03298921.1| hypothetical protein BACDOR_00280 [Bacteroides dorei DSM 17855]
gi|237708179|ref|ZP_04538660.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 9_1_42FAA]
gi|237723710|ref|ZP_04554191.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D4]
gi|265756834|ref|ZP_06090822.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 3_1_33FAA]
gi|212666670|gb|EEB27242.1| hypothetical protein BACDOR_00280 [Bacteroides dorei DSM 17855]
gi|229437921|gb|EEO47998.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides dorei 5_1_36/D4]
gi|229457732|gb|EEO63453.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 9_1_42FAA]
gi|263233620|gb|EEZ19240.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 3_1_33FAA]
Length = 152
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 88 GIVHRYPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
++ YP+ I+ L C +CR C E GT L+ + E + I
Sbjct: 2 NLLFTYPETIVDGEGIRYSIYLAGCRHHCRGCQNPESWNPSAGTPLTPEKIEKIICEINA 61
Query: 141 KSQIWEVIFTGGDPLILSHKRLQ 163
+ + F+GGDPL + L
Sbjct: 62 NPLLDGITFSGGDPLYHPQEFLA 84
>gi|77408017|ref|ZP_00784766.1| radical SAM domain protein protein [Streptococcus agalactiae COH1]
gi|77173379|gb|EAO76499.1| radical SAM domain protein protein [Streptococcus agalactiae COH1]
Length = 315
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 7/135 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+++ L C C C + S L+ ++ EA + Y + + V TGG+ L+
Sbjct: 4 LVINLSQKCNAKCDHCCFSCLPNSVN--CLTDEEIEAVVRYAETHEDVELVSLTGGEALL 61
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
K L+ + L + + + + + L+ L+ AG + N+
Sbjct: 62 RKSKVLE-TIHRLSILG--KDVTLITNGFWATNDKNTKSLLTSLRTAGLRYLTVSYDNYH 118
Query: 217 YEFSEEAIAAISRLA 231
E+ + I RL
Sbjct: 119 SEYIP--VDNIKRLF 131
>gi|228972163|ref|ZP_04132779.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228787647|gb|EEM35610.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar thuringiensis str. T01001]
Length = 333
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 16 VIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARLFISM-GVNKIRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-------- 207
+ L ++ L ++ ++ + + + Q + LKEAG
Sbjct: 75 LRKD--LPTLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLDAI 126
Query: 208 --YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Y+ N ++ + I NAG+ + V+ KG+ND
Sbjct: 127 EDYVFKKINGRNVSTKPVLKGIEEAKNAGLEVKVNMVVKKGMNDS 171
>gi|228939284|ref|ZP_04101877.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228978776|ref|ZP_04139147.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
Bt407]
gi|228781037|gb|EEM29244.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
Bt407]
gi|228820479|gb|EEM66511.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 337
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-------- 207
+ L ++ L ++ ++ + + + Q + LKEAG
Sbjct: 79 LRKD--LPTLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLDAI 130
Query: 208 --YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Y+ N ++ + I NAG+ + V+ KG+ND
Sbjct: 131 EDYVFKKINGRNVSTKPVLKGIEEAKNAGLEVKVNMVVKKGMNDS 175
>gi|322417559|ref|YP_004196782.1| Radical SAM domain-containing protein [Geobacter sp. M18]
gi|320123946|gb|ADW11506.1| Radical SAM domain protein [Geobacter sp. M18]
Length = 357
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 71/219 (32%), Gaps = 38/219 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + C + C C R + ++++ + L I + S+ V+ +GG+
Sbjct: 7 PKWIAWETTQRCNLKCVHC-RCSSELTSSEGDFTTEEGKKLLKEIADFSKPV-VVLSGGE 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
PL+ L + +L + + + + E+ + +K+A +
Sbjct: 65 PLMRPDIFELAEYGTSLG-----LRMCMATNGAL-----VTDEVCEKMKKADIKMVSLSL 114
Query: 209 ----IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+H N P F + A G L S K D +A +
Sbjct: 115 DGSTADVHDNFRQCPGSFD-GVMRAAELFKKHGQKFLVNSSFTKRNQTD---IAATFKVA 170
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+ +Y+ + G++I+ L K
Sbjct: 171 KSIGATAWYMFMI----------VPTGRGEEIMNELISK 199
>gi|326791250|ref|YP_004309071.1| ribosomal protein S12 methylthiotransferase rimO [Clostridium
lentocellum DSM 5427]
gi|326542014|gb|ADZ83873.1| Ribosomal protein S12 methylthiotransferase rimO [Clostridium
lentocellum DSM 5427]
Length = 448
Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 14/138 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--- 153
+K+ C +C +C ++ G + + +A + + + E+I D
Sbjct: 150 AYVKISEGCDKHCTYCIIPKLRGKYRSRQMDK--IKAEVEKLAAD-GVSEIILVAQDTTE 206
Query: 154 -PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
L + L K+L L I+ ++ +R P+ I ELI+ +K K Y+ I
Sbjct: 207 YGRDLENASLAKLLHELGEIEGIEWIRV----LYCYPESITDELIEEIKTNPKVCKYLDI 262
Query: 212 HANHPYEFSEEAIAAISR 229
H + +
Sbjct: 263 PIQHAS--TAILKRMARK 278
>gi|325290900|ref|YP_004267081.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
gi|324966301|gb|ADY57080.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 296
Score = 46.0 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 48/235 (20%), Positives = 82/235 (34%), Gaps = 31/235 (13%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
H+Y RI L + C + C+FC R G + K E ++ +I
Sbjct: 28 HKY-GRIHLPVSPRCNIQCKFCKRSLNKFENRPGVAGSILTPEKALEVVDKALELCPEIT 86
Query: 146 EVIFTG-GDPLILSHKR------------LQKVLKT--LRYIKHV-QILRFHSRVPIVDP 189
V G GD L H L K L T L ++V +I++ + V
Sbjct: 87 VVGIAGPGDTLATPHALDTFQLVHEKYPDLIKCLSTNGLLLRENVNRIVKAGVKTVTVTV 146
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE----FSEEAIAAISRLANAGIILLSQSVLLK 245
++PE LK ++ + E E +A I +++ GI++ +VL+
Sbjct: 147 NAVDPE---ILKNICSYIFYNGQLINGKEAALWLLEAQLAGIKKISERGIVVKINTVLIP 203
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
IN+ + + R + S FR+ E + E+
Sbjct: 204 EINNGH--VGEVARVTSAAGASTINIIPLIPQNEMSDFRVPNCEELNVEREAAER 256
>gi|302874950|ref|YP_003843583.1| Radical SAM domain-containing protein [Clostridium cellulovorans
743B]
gi|307690432|ref|ZP_07632878.1| Radical SAM domain-containing protein [Clostridium cellulovorans
743B]
gi|302577807|gb|ADL51819.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
Length = 454
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 57/141 (40%), Gaps = 11/141 (7%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIF 149
Y + L ++H C + C++CF E +S + AL Y+ ++S EV
Sbjct: 93 YVKALCLNIIHDCNLRCKYCFADEGEYHGHKGKMSIDTAKKALEYVIKRSGPRKNIEVDL 152
Query: 150 TGGDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GG+PL+ K + + K L H + +RF + + PE++ L + +
Sbjct: 153 FGGEPLMAMDVIKEVVQYGKELGE-NHKKNIRFT---MTTNSTLLTPEVVDFLDKEMGNI 208
Query: 208 YIAIHANHPYEFSEEAIAAIS 228
+ + E +++
Sbjct: 209 IL--SIDGRKEINDQVRVRAD 227
>gi|73661954|ref|YP_300735.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|82592974|sp|Q49ZI6|MOAA_STAS1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|72494469|dbj|BAE17790.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 340
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-----EKSQIWEVIFTGGDPL 155
+ C C +C +E+ G L + ++ + + ++ TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDD-FVFLPKDELLTFDEMVRIAQVYTQLGVKKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L K++ L ++ V+ + +
Sbjct: 79 LRRD--LDKLIYQLNQLEGVEDIGLTTNGL 106
>gi|302385460|ref|YP_003821282.1| molybdenum cofactor biosynthesis protein A [Clostridium
saccharolyticum WM1]
gi|302196088|gb|ADL03659.1| molybdenum cofactor biosynthesis protein A [Clostridium
saccharolyticum WM1]
Length = 322
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D I + + C + C +C E + G +L+ + + I +V TGG+
Sbjct: 10 DYIRISVTDRCNLRCVYCMPEEGIVPMSHGDILTYHEILRICE-AGARLGIRKVKVTGGE 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
PL+ ++ ++K L+ I ++ + +
Sbjct: 69 PLVRKD--IEVLIKGLQSIPGIEDVTMTTNG 97
>gi|268609957|ref|ZP_06143684.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus flavefaciens
FD-1]
Length = 443
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 63/196 (32%), Gaps = 31/196 (15%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
LK+ C C +C + G + +D ++ E V+ L
Sbjct: 148 YLKVAEGCSNCCTYCAIPLIRGKF--RSVPMEDVLKEARFLAENGVTELVVIAQDTALYG 205
Query: 158 SH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIH 212
+L ++L L I ++ +R P+RI EL+ + K V Y+ I
Sbjct: 206 KDLYGEPKLAELLTELCRIDGLKWIR----TLYCYPERITDELLDVIAREDKIVKYMEIP 261
Query: 213 ANHPY----------EFSEEAIAAISRLANA--GIILLSQSVLLKGI-NDDPEILANLMR 259
H +E+ A + G+IL + L+ G + E L
Sbjct: 262 IQHCNGDILSRMNRWGDTEKLEALFRHIREKVPGVILR--TTLITGFPGETEEQFNELAE 319
Query: 260 -----TFVELRIKPYY 270
F L PY
Sbjct: 320 FVKRVRFDRLGCFPYS 335
>gi|219667417|ref|YP_002457852.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
gi|219537677|gb|ACL19416.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
Length = 318
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 47/243 (19%), Positives = 83/243 (34%), Gaps = 35/243 (14%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPL-KGIVHRYPDRILLKLLHVCPVYCRFCF 113
P+ RQ I Q E+L E + + + P G VH R+ L + C + CRFC
Sbjct: 12 PLRRQIINQIEQLIETQMEHQLRTPNISDHPCFNGAVHGKKGRLHLPISPACNIQCRFCR 71
Query: 114 RRE-----MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLK 167
R G KG + + + ++ +I V G GD L S ++ +
Sbjct: 72 RACNSKELRPGVAKGILPIEEAVDIVGKALELCPEITVVGIAGPGDAL-ASFHAVEAFRQ 130
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-----------HA--- 213
+ H+ I + + + +L+ L V + H
Sbjct: 131 VHKAYPHL-IKCLSTNGLALPGK---ADLLYDLGVRTVTVTVNAVDPWSASKVVSHILWE 186
Query: 214 -------NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ I + + GII+ +VL+ IND + ++ RT +
Sbjct: 187 GKVYRGEEAGRILLAHQLRGIQQASQRGIIVKVNTVLIPTIND--HCIGDIARTVKQAGA 244
Query: 267 KPY 269
+
Sbjct: 245 TVH 247
>gi|325914911|ref|ZP_08177243.1| GTP cyclohydrolase subunit MoaA [Xanthomonas vesicatoria ATCC
35937]
gi|325538804|gb|EGD10468.1| GTP cyclohydrolase subunit MoaA [Xanthomonas vesicatoria ATCC
35937]
Length = 344
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 7/94 (7%)
Query: 101 LLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + V G LS E + + +V TGG+PL+
Sbjct: 29 VIEACNFRCGYCMPADRVPDDYGFDAQQRLSFDQLETLVRAFVS-VGVTKVRLTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
L ++ L I ++ L + ++ Q
Sbjct: 88 RRD--LPTLITRLTAIAGIEDLALTTNGVLLARQ 119
>gi|292491535|ref|YP_003526974.1| molybdenum cofactor biosynthesis protein A [Nitrosococcus
halophilus Nc4]
gi|291580130|gb|ADE14587.1| molybdenum cofactor biosynthesis protein A [Nitrosococcus
halophilus Nc4]
Length = 335
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 84/218 (38%), Gaps = 31/218 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G + +L+ ++ + I + +V TGG+PL
Sbjct: 18 VTDRCNFRCPYCMPKEIYGRKWAFLPRNELLTFEEISRLVR-IFVTLGVEKVRLTGGEPL 76
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L+++++ L I+ +Q L + ++ + + LKEAG +
Sbjct: 77 LRQD--LEQLVRMLASIEALQDLTLTTNGSLLASR------AERLKEAGLKRVTV-SLDS 127
Query: 216 PYEFS-----------EEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVE 263
E + + + I AG + + V+ +G+N+ + + + R F
Sbjct: 128 LDETTFMAMNDVKFPLAQVLEGIEAATKAGLMPIKINMVVKRGVNN--QDIVPMARYFRH 185
Query: 264 LRIKPYYLHHPDLAAGTSHF-RLTIEEGQKIVASLKEK 300
++ + D T+ + + Q+++ +
Sbjct: 186 SGHIVRFIEYMD-VGHTNDWCWEEVVSAQEMIDQIAAH 222
>gi|308070127|ref|YP_003871732.1| molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa
E681]
gi|305859406|gb|ADM71194.1| Molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa
E681]
Length = 338
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 28/158 (17%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G + LS ++ + ++ TGG+PL
Sbjct: 21 VTDRCNFRCSYCMPKEIFGDDYAFLPQNECLSFEEIHRLTKLFVS-LGVKKIRLTGGEPL 79
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-----------------RINPELIQ 198
+ + L ++ + I V+ + + ++ Q + PEL
Sbjct: 80 MRRN--LPDLVSQILSIDGVEDIGLTTNGVLLGQQAKPLYDAGLRRLNVSLDALAPELFG 137
Query: 199 CLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
L G KP +I + E E ++ + G+
Sbjct: 138 RLNGRGIKPDFILKQIEYAREIGFEIK--VNMVVQKGV 173
>gi|150391787|ref|YP_001321836.1| molybdenum cofactor biosynthesis protein A [Alkaliphilus
metalliredigens QYMF]
gi|167011809|sp|A6TVF9|MOAA_ALKMQ RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|149951649|gb|ABR50177.1| molybdenum cofactor biosynthesis protein A [Alkaliphilus
metalliredigens QYMF]
Length = 320
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ +C + C++C + + + +L+ ++ E + I ++ I +V TGG+PL+
Sbjct: 16 ITDLCNLRCQYCMPEKGIYKKTHQDILTLEEIEQIVR-IGAENGINKVRITGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
K + ++K + I +Q + +
Sbjct: 73 KGVIGLIKNISNIPGIQDIALTTNGL 98
>gi|325829809|ref|ZP_08163267.1| putative heme d1 biosynthesis radical SAM protein NirJ2
[Eggerthella sp. HGA1]
gi|325487976|gb|EGC90413.1| putative heme d1 biosynthesis radical SAM protein NirJ2
[Eggerthella sp. HGA1]
Length = 334
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 64/198 (32%), Gaps = 35/198 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C C++ LS ++ + + I + +IF+GG+PL+
Sbjct: 3 VSWMTTNKCNLKCVHCYQDAE--EATDKELSCEEGKKMIDEIAR-AGFKVMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG--------KP 206
+ L + LR F S + I PE+ LKEAG
Sbjct: 60 RPD------IYELVAHAASRGLRPVFGSNGTL-----ITPEVAVRLKEAGACAMGISVDS 108
Query: 207 VYIAIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ H H Y+ + I AG+ + ++ N D
Sbjct: 109 LDAVKHDRFRGLEHAYDLTMA---GIEACKQAGLPFQLHTTVVD-WNRDEVCAITDFA-- 162
Query: 262 VELRIKPYYLHHPDLAAG 279
VE+ +Y+
Sbjct: 163 VEIGAMAHYVFFLIPVGR 180
>gi|254884770|ref|ZP_05257480.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 4_3_47FAA]
gi|294774983|ref|ZP_06740513.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides vulgatus PC510]
gi|319644167|ref|ZP_07998692.1| hypothetical protein HMPREF9011_04295 [Bacteroides sp. 3_1_40A]
gi|254837563|gb|EET17872.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 4_3_47FAA]
gi|294451192|gb|EFG19662.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides vulgatus PC510]
gi|317384289|gb|EFV65260.1| hypothetical protein HMPREF9011_04295 [Bacteroides sp. 3_1_40A]
Length = 152
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 88 GIVHRYPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
++ YP+ I+ L C +CR C E GT L+ + E + I
Sbjct: 2 NLLFTYPETIVDGEGIRYSIYLAGCRHHCRGCQNPESWNPSAGTPLTPEKIEKMICEINA 61
Query: 141 KSQIWEVIFTGGDPLILSHKRLQ 163
+ + F+GGDPL + L
Sbjct: 62 NPLLDGITFSGGDPLYHPQEFLA 84
>gi|170760513|ref|YP_001787335.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
A3 str. Loch Maree]
gi|226704814|sp|B1KU20|MOAA_CLOBM RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|169407502|gb|ACA55913.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
A3 str. Loch Maree]
Length = 319
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 22/162 (13%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E +V + ++ ++ + + ++ FTGG+PLIL +
Sbjct: 16 VTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLILKN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE- 218
+ K++ I ++ + + I+ R+ LK + I + E
Sbjct: 75 --IDKLIYNTSKISSIKDIAMTTNA-ILLEDRVEELKKAGLKR------VNISLDSLKED 125
Query: 219 ----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ + L+ + +V++KGINDD
Sbjct: 126 RFKSITRGGDINKVFKSIEKSLSIGMRPIKINTVIMKGINDD 167
>gi|148381600|ref|YP_001256140.1| putative bacteriocin biosynthesis protein [Clostridium botulinum A
str. ATCC 3502]
gi|148291084|emb|CAL81548.1| putative bacteriocin biosynthesis protein [Clostridium botulinum A
str. ATCC 3502]
Length = 430
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP + ++ CP+ CR C+ E ++LS + + L I + I +V TGG
Sbjct: 108 YPHALCWEITDYCPLNCRHCYLPEK----NNSILSRDNIDNVLEIIDS-AGIQQVQVTGG 162
Query: 153 DPLILSHKRLQKVLKTL 169
+ L L+ ++ +L
Sbjct: 163 EALTHP--ELEYIIDSL 177
>gi|289548181|ref|YP_003473169.1| molybdenum cofactor biosynthesis protein A [Thermocrinis albus DSM
14484]
gi|289181798|gb|ADC89042.1| molybdenum cofactor biosynthesis protein A [Thermocrinis albus DSM
14484]
Length = 332
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 42/222 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C C FC K +L+ ++ + + + + +V TGG+PL+
Sbjct: 17 VTDRCNFRCSFCMPDGHQYEFFPKEEILTFEEITRVVK-VSKSLGVRKVRITGGEPLLRR 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRIN-------PELIQCLK 201
++K++ + V+ + + ++ +R+ E+ L
Sbjct: 76 D--IEKLISMIS--PFVEDVSLTTNGFLLKEKASSLKEAGLKRVTVSFHSLRDEVFSALV 131
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRT 260
V H E EEA G+ + ++KGINDD +
Sbjct: 132 GRSVRVA------HILEGIEEA-------IKVGLTPVKVNVCVVKGINDDEILSIAKFFK 178
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLT-IEEGQKIVASLKEKI 301
++ + ++ D + + L + Q+IV ++ + +
Sbjct: 179 --DMGVVVRFIEFMD-VGNLNGWSLDKVVSAQEIVNTIAQHM 217
>gi|238619478|ref|YP_002914303.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4]
gi|238380547|gb|ACR41635.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4]
Length = 350
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 23/195 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ CP+ C+ C R + L+++++ L I ++ ++FTGGD
Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKVV-IVFTGGD 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL S L + K+L + R++ E ++ + + + I++
Sbjct: 65 PLSRSDIFELMEYAKSLG---------LVVSIAPSPSHRLDDETMKMISNYARYMSISLD 115
Query: 213 ANHPYEFSEE--------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
P A+ I GI + +++ K + + L E+
Sbjct: 116 GATPQTHDWLRGLGSYKYALRGIELGLKYGIQVQVNTLVWKKSYSELPFVVKL---LKEM 172
Query: 265 RIKPYYLHHPDLAAG 279
+K + +
Sbjct: 173 GVKIWEVFFLIPVGR 187
>gi|303257958|ref|ZP_07343967.1| molybdenum cofactor biosynthesis protein A [Burkholderiales
bacterium 1_1_47]
gi|302859301|gb|EFL82383.1| molybdenum cofactor biosynthesis protein A [Burkholderiales
bacterium 1_1_47]
Length = 367
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 87/265 (32%), Gaps = 42/265 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ + + C CR+C +E VLS ++ I ++ TG
Sbjct: 39 VRISITDRCNFRCRYCMPKEKFEKDHCFLSHTEVLSFEEIIRLAKIFAAN-GIEKIRLTG 97
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDPQRINP------ELIQCLK 201
G+PL+ K ++ +++ L +K + + + + + L L
Sbjct: 98 GEPLLR--KGIEFLIEELSKLKTWNGKPLDVAVTTNGAALSAKAKSLAAAGLKRLTVSLD 155
Query: 202 EAGKPVYIAIH-ANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMR 259
+Y ++ N P E + +A I +AGI + V+ +G+N+ I
Sbjct: 156 AMDPQIYKDLNDVNFPIE---KTLAGIQAAKDAGIPSIKINVVVKRGVNEKELIKIA--E 210
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
F I Y+ D+ + KIV + Y ++
Sbjct: 211 HFKGSGIIVRYIEFMDVGTSNGWRLDDVIPSHKIVEEINR--------VYPIE------- 255
Query: 320 VKIDTHNIKKVGNGSYCITDHHNIV 344
++ + +V + D +
Sbjct: 256 -PLNPNYTGEVAT-RWAYKDGSGEL 278
>gi|227827329|ref|YP_002829108.1| radical SAM protein [Sulfolobus islandicus M.14.25]
gi|229584545|ref|YP_002843046.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27]
gi|227459124|gb|ACP37810.1| Radical SAM domain protein [Sulfolobus islandicus M.14.25]
gi|228019594|gb|ACP55001.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27]
Length = 350
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 23/195 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ CP+ C+ C R + + L+++++ L I ++ ++FTGGD
Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPSELNTEESRKLLEDIARFGKVV-IVFTGGD 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL S L + K+L + R++ E ++ + + + I++
Sbjct: 65 PLSRSDIFELMEYAKSLG---------LVVSIAPSPSHRLDDETMKMISNYARYMSISLD 115
Query: 213 ANHPYEFSEE--------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
P A+ I GI + +++ K + + L E+
Sbjct: 116 GATPQTHDWLRGLGSYKYALRGIELGLKYGIQVQVNTLVWKKSYSELPFVVKL---LKEM 172
Query: 265 RIKPYYLHHPDLAAG 279
+K + +
Sbjct: 173 GVKIWEVFFLIPVGR 187
>gi|56962668|ref|YP_174394.1| molybdenum cofactor biosynthesis protein A [Bacillus clausii
KSM-K16]
gi|56908906|dbj|BAD63433.1| molybdenum cofactor biosynthesis protein A [Bacillus clausii
KSM-K16]
Length = 338
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 82/214 (38%), Gaps = 31/214 (14%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVIFTGGDPLIL 157
C C +C E+ G + + + ++ Q + ++ TGG+PL+
Sbjct: 23 DRCNFRCSYCMPAEVFGPDH-AFMDESELLSVDEIVRTAEQFVQLGVKKIRITGGEPLLR 81
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
K + ++ L I+ ++ L + ++ P++ + LK AG + I +
Sbjct: 82 --KEVPHLIGRLHAIEGLEDLALTTNGVML------PKMAKALKAAGLQ-RVNISLDALS 132
Query: 218 EFS-----------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ + I+ +AG+ + V+ +G N+ I L R EL +
Sbjct: 133 TETFQKMSGRKTKPQAVFNGIAAAKDAGLGVKINMVVKRGANEQEVI--PLARYAKELGV 190
Query: 267 KPYYLHHPDLAAGTSH---FRLTIEEGQKIVASL 297
++ D+ + ++ +E K+V+ +
Sbjct: 191 TLRFIEFMDVGQTNGWDFSYVVSKKELYKLVSQI 224
>gi|322698973|gb|EFY90738.1| molybdenum cofactor biosynthesis protein 1 B [Metarhizium acridum
CQMa 102]
Length = 677
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 92/266 (34%), Gaps = 26/266 (9%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HR D + + + C + C +C E V S +L++ + L+ I + ++
Sbjct: 79 HRQHDYLRISVTERCNLRCVYCMPEEGVPLSPNRELLTTPEII-MLSSIFVSQGVNKIRL 137
Query: 150 TGGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGG+P + L + LR + ++ L + + R +++ G +
Sbjct: 138 TGGEPTVRRDILSLMHQIGALRP-RGLKQLCITTNGISL--HRKLDSMVEA-GLTGVNLS 193
Query: 209 IAI------HANHPYEFSEEAIAAISRLAN-----AGIILLSQSVLLKGINDDPEI-LAN 256
+ + + +I R+ AGI L V+++GIND +
Sbjct: 194 LDTLDPWQFQIMTRRKGFDAVQKSIERILEMNEMGAGIKLKINCVVMRGINDCEVLPFVE 253
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L R +L ++ D + E ++ + + GL + + D
Sbjct: 254 LTRE-KDLEVRFIEYMPFDGNKWNEGKMFSYAEMLDLI---RGQYPGLAK---VKDDKND 306
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHN 342
K + ++G + +
Sbjct: 307 TSKTWHIPGFVGRIGFITSMTHNFCG 332
>gi|304437665|ref|ZP_07397617.1| radical SAM domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369298|gb|EFM22971.1| radical SAM domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 378
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 69/212 (32%), Gaps = 32/212 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + + C +YC C+R G + LS+++ + L I + + +IF+GG+PL
Sbjct: 49 ISWNVTNACNMYCAHCYRDA--GCRADEELSTEEGKKLLREIAK-AGFRIMIFSGGEPLS 105
Query: 157 LSHK-RLQKVLKTLRYIKHVQILRFHSRVPIV-------DPQRINPELIQCLKEAGKPVY 208
L + L I F + ++ + + L K +
Sbjct: 106 RPDILELVAYARGLGLIP-----VFGTNGTLIDLPTAKALKEAGACGMGISLDSLDKKKH 160
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ P + + G+ + ++ + + L + VE+ K
Sbjct: 161 -DTFRSFPGGWDGAVR-GMENCRAVGLPFQIHTTVM---DWNAHELEAMTDFAVEIGAKA 215
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
++ F + + I L+
Sbjct: 216 HHFF----------FLVPTGRAETIEEESLRA 237
>gi|262369704|ref|ZP_06063032.1| molybdopterin biosynthesis protein [Acinetobacter johnsonii SH046]
gi|262315772|gb|EEY96811.1| molybdopterin biosynthesis protein [Acinetobacter johnsonii SH046]
Length = 339
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 78/218 (35%), Gaps = 25/218 (11%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R ++ + + C C +C +K +LS ++ ++ + I ++ TG
Sbjct: 16 REKRKLRISVTDRCNFKCVYCMPEHPEWMKKHDLLSFEELYHFCKFMVQH-GIEQIRITG 74
Query: 152 GDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRV------PIVDPQRINPELIQCLKEA 203
G+PL+ + + ++ L+ +K ++ + + Q +L L
Sbjct: 75 GEPLMR--QGVVHFIEQLQSLKKQGLKRISMTTNGHYLKQYAAALKQAGLDDLNISLDSL 132
Query: 204 GKPVYIAIHANHPYEFSEE----AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
H +++ + I G + +VL+KGINDD +
Sbjct: 133 DAE-----QFQH---LTKKQLHTVLEGIQVAQQVGFNIKINTVLMKGINDDQIVPLVQWA 184
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
++ ++ D S + + Q+I++ L
Sbjct: 185 KLQKVELRFIEFMPLDGDQNWS--QADVVTEQEILSQL 220
>gi|238927734|ref|ZP_04659494.1| radical SAM [Selenomonas flueggei ATCC 43531]
gi|238884450|gb|EEQ48088.1| radical SAM [Selenomonas flueggei ATCC 43531]
Length = 384
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 69/212 (32%), Gaps = 32/212 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + + C +YC C+R G + LS+++ + L I + + +IF+GG+PL
Sbjct: 55 ISWNVTNACNMYCAHCYRDA--GCRADEELSTEEGKKLLREIAK-AGFRIMIFSGGEPLS 111
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIV-------DPQRINPELIQCLKEAGKPVY 208
L + L I F + ++ + + L K +
Sbjct: 112 RPDIIELVAYARGLGLIP-----VFGTNGTLIDLPTAKALKEAGACGMGISLDSLDKKKH 166
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ P + + G+ + ++ + + L + VE+ K
Sbjct: 167 -DTFRSFPGGWDGAVR-GMENCRAVGLPFQIHTTVM---DWNAHELEAMTDFAVEIGAKA 221
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVAS-LKE 299
++ F + + I L+
Sbjct: 222 HHFF----------FLVPTGRAETIEEESLRA 243
>gi|39998543|ref|NP_954494.1| radical SAM domain-containing protein [Geobacter sulfurreducens
PCA]
gi|39985490|gb|AAR36844.1| radical SAM domain protein [Geobacter sulfurreducens PCA]
gi|298507486|gb|ADI86209.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter sulfurreducens KN400]
Length = 356
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 65/218 (29%), Gaps = 36/218 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + + C + C C R + ++++ + L I + S+ ++ +GG+
Sbjct: 7 PKWVAWETTQKCNLKCVHC-RCSSDLTSSEGDFTTEEGKKLLKEIADFSKPV-IVLSGGE 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL+ L + +L + + + + E+ +++A +
Sbjct: 65 PLMRQDIFELAEYGTSLG-----LRMCMATNGAL-----VTDEICAKMRKADIKMVSLSL 114
Query: 213 ANHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
E ++ G L S K D L ++
Sbjct: 115 DGSSAEVHDDFRQCPGAFEGVVRAAEIFRRNGQKFLINSSFTKRNQHDIANTFKLAKSL- 173
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+Y+ + G++I+ L K
Sbjct: 174 --GATAWYMFMI----------VPTGRGEEIMNELISK 199
>gi|160944519|ref|ZP_02091747.1| hypothetical protein FAEPRAM212_02032 [Faecalibacterium prausnitzii
M21/2]
gi|158444301|gb|EDP21305.1| hypothetical protein FAEPRAM212_02032 [Faecalibacterium prausnitzii
M21/2]
Length = 325
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
RY I + +C + CR+C + ++ VL+ ++ A + I V
Sbjct: 4 RYQREIHYLRLSVTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLRLAALFAQC-GIDTVR 62
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
TGG+PL+ + + +++ L+ ++ + + ++ Q
Sbjct: 63 VTGGEPLVRKN--VAQLVAGLKATPGIRRVTLTTNAMLLAEQ 102
>gi|313668419|ref|YP_004048703.1| hypothetical protein NLA_11150 [Neisseria lactamica ST-640]
gi|313005881|emb|CBN87337.1| conserved hypothetical protein [Neisseria lactamica 020-06]
Length = 369
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--------KSQIWE 146
D +LLK+ C + C +C+ +G +E ++ I++ + + +
Sbjct: 3 DTVLLKVASRCNLNCTYCY-VYHLGDDGWKDNPKLLSEKSIDDIEKSLFDLYSFQGKSFA 61
Query: 147 VIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRV 184
++ GG+P +L RL+ +LK LR + + +
Sbjct: 62 IVLHGGEPFLLPKHRLEYLLKKLRHRLPEYTTVSIQTNG 100
>gi|261400665|ref|ZP_05986790.1| putative radical SAM [Neisseria lactamica ATCC 23970]
gi|269209574|gb|EEZ76029.1| putative radical SAM [Neisseria lactamica ATCC 23970]
Length = 369
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--------KSQIWE 146
D +LLK+ C + C +C+ +G +E ++ I++ + + +
Sbjct: 3 DTVLLKVASRCNLNCTYCY-VYHLGDDGWKDNPKLLSEKSIDDIEKSLFDLYSFQGKSFA 61
Query: 147 VIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRV 184
++ GG+P +L RL+ +LK LR + + +
Sbjct: 62 IVLHGGEPFLLPKHRLEYLLKKLRHRLPEYTTVSIQTNG 100
>gi|14601539|ref|NP_148079.1| PqqE-like protein [Aeropyrum pernix K1]
gi|5105343|dbj|BAA80656.1| PqqE homolog [Aeropyrum pernix K1]
Length = 403
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 67/196 (34%), Gaps = 17/196 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKSQIWEVIFT 150
P + + C + C+ C + Q G + + + + + + + + + T
Sbjct: 11 PLIVFWESTKACLLACKHCRAEALTEPQPGELSTREALALVDQVVEFGRPYPIL---VIT 67
Query: 151 GGDPLILSH--KRLQKVLK---TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GGDPL+ + L+ + + V +R + R+ I ++G
Sbjct: 68 GGDPLMRRDFWRILEYAVSQGLRVAVAPSVT--PLLTREVVRRMARMGVARISISIDSGL 125
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P P F + ++ + AG+ + + ++K D L ++L
Sbjct: 126 PEVHDAIRGVPGTF-KASVNIVREALAAGLPVQINTTVMKPTVDSLPETLKL---LLDLG 181
Query: 266 IKPYYLHHPDLAAGTS 281
+ + + + +
Sbjct: 182 VDVWEVFYVVPTGRAA 197
>gi|297569896|ref|YP_003691240.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925811|gb|ADH86621.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 355
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 70/215 (32%), Gaps = 33/215 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ C + C C + +++ S + + L I + V+ +GG+
Sbjct: 5 PKWLAWEITRRCNLNCVHCRSSSELEAKEHPDFSFDEAKRILDDIASYASPV-VVLSGGE 63
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + + + LR + +N ++ + LKEAG +
Sbjct: 64 PLLRDD------VFEIAAYGTGKGLRMC---LATNGTLVNEQVCRRLKEAGIRMVSLSLD 114
Query: 209 ---IAIHANHPYE--FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+H N + + I A I L S K + + L +
Sbjct: 115 GADATVHDNFRNQPGAFDGTINAARLFKEHDIPFLINSSFTKRNQAEIPKVYRLAKEL-- 172
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
K +Y+ + G+ I+A L
Sbjct: 173 -GAKAWYMFMI----------VPTGRGEDIMAELI 196
>gi|333029185|ref|ZP_08457246.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides coprosuis DSM 18011]
gi|332739782|gb|EGJ70264.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides coprosuis DSM 18011]
Length = 153
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
I+H Y + I+ CP C C E + GT+L+ + + + I
Sbjct: 2 NILHTYSETIVDGDGIRYSIYFAGCPHRCVGCHNPESRNPKAGTLLTDEKLDKIIDEINN 61
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ + +GGDP + L
Sbjct: 62 NPLLDGITLSGGDPFFNPIEML 83
>gi|115622853|ref|XP_791955.2| PREDICTED: similar to MGC84142 protein, partial [Strongylocentrotus
purpuratus]
Length = 267
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R+ + + + L C + C++C E V S K +LS+++ LA + + ++
Sbjct: 81 QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILH-LAKLFVSEGVDKIRL 139
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
TGG+PL+ + ++++ LR ++ ++ + + +
Sbjct: 140 TGGEPLVRKD--IVEIIEGLRELEGLKQIAMTTNGVTLAK 177
>gi|298504362|gb|ADI83085.1| cobalamin-binding radical SAM domain iron-sulfur cluster-binding
oxidoreductase [Geobacter sulfurreducens KN400]
Length = 428
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 23/210 (10%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
RY ++ CP C FC V G +D + LA I+ + V
Sbjct: 157 RRYLTTQTVQASRGCPYDCSFCT----VTPYFGRTFRYRDPDDILAEIRSFRRKLVVFLD 212
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
D L+ + + +L+ L + +R+ S+ + + +PEL++ + ++G
Sbjct: 213 --DNLLGDPIKARPILRGLAEMD----VRWGSQTNLRFAE--DPELLKLVADSGCIGLFV 264
Query: 211 -------IHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPE-ILANLMRTF 261
HAN + + + R+ +AGIIL + ++ G +D E + +R
Sbjct: 265 GIESVTGSHANMAKSGTRYSQTDLMKRVRDAGIILE--TSIIFGFDDHDESVFETTLRFL 322
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
E H GT+ FR EEG+
Sbjct: 323 EECSPSVPTFHILTPYPGTALFRQFQEEGR 352
>gi|239635993|ref|ZP_04677010.1| molybdenum cofactor biosynthesis protein A [Staphylococcus warneri
L37603]
gi|239598458|gb|EEQ80938.1| molybdenum cofactor biosynthesis protein A [Staphylococcus warneri
L37603]
Length = 341
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-----EKSQIWEVIFTGGDPL 155
+ C C +C +E+ G L ++ ++ + + ++ TGG+PL
Sbjct: 21 VTDRCNFRCDYCMPKEIFGDD-FVFLPKEELLTFEEMVRISKLYAQLGVKKIRITGGEPL 79
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I ++ + +
Sbjct: 80 LRRN--LYQLIEQLNQIDGIEDIGLTTNGL 107
>gi|194290177|ref|YP_002006084.1| molybdenum cofactor biosynthesis protein a [Cupriavidus taiwanensis
LMG 19424]
gi|193224012|emb|CAQ70021.1| MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A [Cupriavidus taiwanensis
LMG 19424]
Length = 389
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 81/248 (32%), Gaps = 29/248 (11%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRR 115
IP + L P N G+V R L + + C C +C +
Sbjct: 20 VIPIFD-LRDHRYRSMTPSIPGNLVAPTGLVADRRGRPLHDLRISVTDRCNFRCVYCMPK 78
Query: 116 EMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
E+ +LS ++ E + ++ TGG+PL+ + ++ +++ L
Sbjct: 79 EVFDKDYTFLPHSELLSFEEIERTARLFVAH-GVEKIRLTGGEPLLRKN--IEHLVEMLA 135
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-------IHANHPYEFSEEA 223
I+ V + + + + L++AG +
Sbjct: 136 KIETVSGKPLD--LTLTTNASLLARKARALRDAGLTRVSVSLDAIDDATFRRMNDVDFAV 193
Query: 224 IAAISRL---ANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ + G + V+ +G ND + + + R F I ++ D
Sbjct: 194 ADVLHGIETAQAVGLAPIKVNMVVKRGTND--QEIVPMARHFRHSGIILRFIEFMD-VGA 250
Query: 280 TSHFRLTI 287
++H+++
Sbjct: 251 SNHWQMDE 258
>gi|330686411|gb|EGG98011.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis VCU121]
Length = 341
Score = 46.0 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-----EKSQIWEVIFTGGDPL 155
+ C C +C +E+ G L ++ ++ + + ++ TGG+PL
Sbjct: 21 VTDRCNFRCDYCMPKEIFGDD-FVFLPKEELLTFEEMVRISKLYAQLGVKKIRITGGEPL 79
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ L I+ ++ + +
Sbjct: 80 LRRN--LYQLIEQLNQIEGIEDIGLTTNGL 107
>gi|83590093|ref|YP_430102.1| radical SAM family protein [Moorella thermoacetica ATCC 39073]
gi|83573007|gb|ABC19559.1| Radical SAM [Moorella thermoacetica ATCC 39073]
Length = 335
Score = 46.0 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 37/199 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C +YC C+R G++ L++ + + K+ +IF+GG+PL+
Sbjct: 5 WNTTNQCNLYCDHCYRDA--GARVEDELTTAEAGNLIDE-AAKAGFRIMIFSGGEPLLRP 61
Query: 159 HKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L +++ + LR S ++ EL + LK AG + + I
Sbjct: 62 D--LPELVSRAAA----RGLRPVLGSNGTLL-----TTELARELKAAG-ALAVGISL--- 106
Query: 217 YEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
A+A ++ AG+ + + D+ E L +L V
Sbjct: 107 DSCDPARHDRLRQKEGAWRKAVAGMAACREAGLPFQVHTTVFDWNQDELEKLTDLA---V 163
Query: 263 ELRIKPYYLHHPDLAAGTS 281
EL ++ +
Sbjct: 164 ELGAVAHHFFFLVPTGRAA 182
>gi|317471603|ref|ZP_07930947.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp.
3_2_56FAA]
gi|316900918|gb|EFV22888.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp.
3_2_56FAA]
Length = 324
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 89/238 (37%), Gaps = 37/238 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C ++ + +LS ++ + I + TGG+PL+ K
Sbjct: 16 VTDRCNLRCRYCMPEDIPSVEHTDILSYEELLSICES-AADLGICKFKITGGEPLVR--K 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDP--QRIN----PELIQCLKEAGKPVYIAIHAN 214
++ L+ + V+ + S +++P +R+ + L + Y I
Sbjct: 73 GCAGFIERLKQLPGVRQVTLTSNGLLLEPYLERLKEAGIDGINISLDTLDEKKYKEITGK 132
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY---YL 271
+ A+ +R+ G+ V++KGINDD + +E+ + +
Sbjct: 133 TGVQTVLSAVRNSARM---GLNTKVNCVVMKGINDDEIL------DLLEIGREDHVDIRF 183
Query: 272 HHPDLAAGTSHFRLTIEEGQ---KIVASLKEKISGLCQ--------PFYILDLPGGYG 318
+ F G +I++ L++ G+ + P L +PG G
Sbjct: 184 IEMMPIGFGTQF-----TGMNSDEIISLLRQTYPGIKKEEQIRGNGPARYLKIPGFSG 236
>gi|237727284|ref|ZP_04557765.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434140|gb|EEO44217.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 368
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 66/180 (36%), Gaps = 22/180 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
P +L C + C CF V + G +L + +Q+ ++ ++ TG
Sbjct: 24 PITANFELTPTCTLNCDMCFIHTERNVVERHGGLLPLQQWLDWAEQLQDMGTLF-ILLTG 82
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+P++ +++ LR + + ++ + I+ E+++ L+
Sbjct: 83 GEPMLYP--HFKELYTRLREMGFILT--LNTNGTL-----IDNEMVRILQTHKPRRVNVT 133
Query: 212 HANHPYEF------SEE----AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E + + + A+ RL AGI + +++ D + + L R
Sbjct: 134 LYGSSRETYGRLCHNPQGYTLCVEALKRLKKAGIDVKLNVSIVRKNEKDYDEIIRLTRLL 193
>gi|153809478|ref|ZP_01962146.1| hypothetical protein BACCAC_03796 [Bacteroides caccae ATCC 43185]
gi|149127859|gb|EDM19082.1| hypothetical protein BACCAC_03796 [Bacteroides caccae ATCC 43185]
Length = 167
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 93 YPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
YP+ I+ L C +C C E G L+ + ++ + I+ +
Sbjct: 17 YPETIVDGEGIRYSIYLAGCSHHCPGCHNPESWNPNAGEELTEEKIQSIIREIKANPLLD 76
Query: 146 EVIFTGGDPLILSHKRLQ 163
V F+GGDPL + L
Sbjct: 77 GVTFSGGDPLFYPEEFLA 94
>gi|171320975|ref|ZP_02909966.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MEX-5]
gi|171093770|gb|EDT38910.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MEX-5]
Length = 372
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 90/256 (35%), Gaps = 57/256 (22%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C R+ G + SS+ A L I + ++ TGG+PL+
Sbjct: 46 VIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAFISLGVEKIRLTGGEPLL 105
Query: 157 LSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRINP 194
+ L+ +++ L + + + LR SRV + I+
Sbjct: 106 RRN--LEALIERLATLTTIDGKPVEIALTTNGSLLAAKARTLRDAGLSRVTVSL-DAIDD 162
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEI 253
+ + + +A PV +A I AG + +V+ +G NDD
Sbjct: 163 VVFRRMSDADVPV-------------ARVLAGIEAAQAAGLAPVKVNAVIERGANDDQ-- 207
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEGQKIVASLKEKI----SGL- 304
+ L+R F + ++ + D G S + + ++++ + + G
Sbjct: 208 ILPLVRHFRHGGVAVRFIEYMD-VGGASAWSGDKVVPATRMRELIETSYPLVLVGEPGHD 266
Query: 305 --CQPFYILDLPGGYG 318
+D G G
Sbjct: 267 ATAIRCRHIDGAGEVG 282
>gi|90416699|ref|ZP_01224629.1| molybdenum cofactor biosynthesis protein A [marine gamma
proteobacterium HTCC2207]
gi|90331452|gb|EAS46688.1| molybdenum cofactor biosynthesis protein A [marine gamma
proteobacterium HTCC2207]
Length = 336
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 89/212 (41%), Gaps = 24/212 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C EM K +LS ++ +AA A+++ I ++ TGG+PLI
Sbjct: 27 VTDRCNLRCTYCMAEEMTFLPKQQILSLEELRDAATAFVE--LGIRKIRLTGGEPLIRRD 84
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE---AGKPVYIAI-HANH 215
+ K++ +L + + L + ++ P + Q LK+ + + + A
Sbjct: 85 --ILKLVSSLSALPGLDELTMTTNGLLL------PTMAQPLKDAGISRLNISVDSLKAER 136
Query: 216 PYEFSE--EAIAAISRLANAGII----LLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
+ + + + + A + + +V+L G NDD I +L R V+ +
Sbjct: 137 FKQLTRVGDLSQVLEGIHAANAVGFGKIKLNAVILAGFNDDEVI--DLARFAVDNGMDIS 194
Query: 270 YLHHPDLAAGTSHFRLTIE-EGQKIVASLKEK 300
++ L +SH R+ + +I L +
Sbjct: 195 FIEEMPLGEISSHKRVNTQITSAQIHEQLAAQ 226
>gi|284045650|ref|YP_003395990.1| molybdenum cofactor biosynthesis protein A [Conexibacter woesei DSM
14684]
gi|283949871|gb|ADB52615.1| molybdenum cofactor biosynthesis protein A [Conexibacter woesei DSM
14684]
Length = 330
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 97 ILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + + C C++C + ++ +L+ ++ + + + +V TGG+PL
Sbjct: 16 VRISVTDRCNFRCQYCMPADGLPWLEREEILTFEEIARLVGLLASM-GVHDVRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ ++++ L I V L +
Sbjct: 75 VRRD--FPRLVEMLAAIPAVHDLSITTNG 101
>gi|91203193|emb|CAJ72832.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 447
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 24/169 (14%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY-PDRILLKLLHVCPVYCRF 111
+DP IPQ L P ++ + I + R LK+ C +YC +
Sbjct: 118 DDP----CIPQITSLP--PYLLQNNTFQKDSIYRLNISRFHGHTRAFLKIEDGCDMYCSY 171
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI----LSHKR-LQK 164
C + + S+ + + + E++ TG +S L K
Sbjct: 172 C-----IIPYVRGAIKSRKWQDIHDEAKRLIHNGYKEIVLTGIHLGAYGKEMSDGISLVK 226
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+L+ L + +R S ++ I PEL+ + E K + +H
Sbjct: 227 ILERLSEFSGLGRIRLSS----IEVNEITPELMHLIAE-RKTICPHLHI 270
>gi|303238281|ref|ZP_07324817.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
gi|302594327|gb|EFL64039.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
Length = 452
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 24/174 (13%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
+I + C + CR C+ + + I++ K+ + EV TGG+
Sbjct: 99 KIHWAVTGRCNLKCRHCY-----MESPSNKFGELPFDQVVDIIKQIEKANVLEVSLTGGE 153
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-------- 205
P + + ++ L +++ + + +V+ + I +L L
Sbjct: 154 PFLRKD--IFDIIDKLTQ-SGIRVPQICTNGILVNDE-ILKKLESILGTKPTIQISFDGI 209
Query: 206 -PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK-GINDDPEILANL 257
+ N + EA I R+ +AG + + + K I+ E L
Sbjct: 210 GAHDLMRGINGVESLTIEA---IKRVVDAGFPVEISTCIDKLNISSLKETYKYL 260
>gi|254515478|ref|ZP_05127538.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
NOR5-3]
gi|219675200|gb|EED31566.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
NOR5-3]
Length = 361
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 63/193 (32%), Gaps = 17/193 (8%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRRE 116
+P K ++ + + + + ++ R+ R+ + C C +C +
Sbjct: 5 ILPVKSAQRLVTAAQRSTLRAMHENTPPTLIDRFGRRVDYLRLSVTDRCDFRCVYCMAED 64
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
M K +L+ ++ + ++ TGG+PL+ + ++++ L + +
Sbjct: 65 MTFVPKSEILTLEELAQVAQAF-VNLGVRKIRLTGGEPLVR--HNIMQLVEQLGAMPGLD 121
Query: 177 ILRFHSRVPIVDP----------QRINPELIQCLKEAGKPVYIAIHANH-PYEFSEEAIA 225
L + + +R+N L + + H A
Sbjct: 122 ELVMTTNGSQLQRLAQPLSDAGVKRLNISLDSLQPRRFRQITRVGHLEQVIAGIDAACAA 181
Query: 226 AISRLANAGIILL 238
RL +I+
Sbjct: 182 GFERLRINAVIMR 194
>gi|167770639|ref|ZP_02442692.1| hypothetical protein ANACOL_01985 [Anaerotruncus colihominis DSM
17241]
gi|167667234|gb|EDS11364.1| hypothetical protein ANACOL_01985 [Anaerotruncus colihominis DSM
17241]
Length = 457
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF ++S + AA+ Y+ + S EV GG+PL
Sbjct: 101 LHIAHDCNLRCKYCFADTGEYMGHRELMSPETGRAAIDYLIDHSAGRHNLEVDLFGGEPL 160
Query: 156 ILSHKRLQKVLKTLRYIK--HVQILR--FHSRVPIVDPQRIN 193
++ + +++V++ R ++ H ++ R + ++D +I+
Sbjct: 161 -MNFETVREVVRYARSLEKKHGKLFRFTITTNGILLDDDKID 201
>gi|332830635|gb|EGK03241.1| nitrogenase cofactor biosynthesis protein NifB [Dysgonomonas gadei
ATCC BAA-286]
Length = 420
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 84/241 (34%), Gaps = 28/241 (11%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQEK----SQI 144
H+Y R+ L + C + C +C R+ ++ ++S ++ Y++ I
Sbjct: 16 HKYA-RVHLPVAPKCNIQCNYCNRKYDCCNESRPGVTSTILSPLQSVHYMKALSEKIPNI 74
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHV----------------QILRFHSRVPIV 187
V G GDP + + LQ + + + +I +
Sbjct: 75 SVVGIAGPGDPFANAEETLQTMRLAQKEFPDLIFCLSSNGLDLAPYIDEIAEIGVSHVTI 134
Query: 188 DPQRINPE-LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+NPE L + + + E+ + I +L I + +V+ G
Sbjct: 135 TVNSLNPETLAKIYRWVRYKRRVYRGEEGAKVLLEQQLYCIQKLKEKNITVKINTVICPG 194
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND + +L + EL T F + E ++++ +K +IS +
Sbjct: 195 IND--HEIEDLAKKVAELGADTMNCIPMYPTENTE-FEILKEPSKEMMKDIKARISKYIK 251
Query: 307 P 307
P
Sbjct: 252 P 252
>gi|310779932|ref|YP_003968264.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
gi|309749255|gb|ADO83916.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
Length = 292
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 21/154 (13%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIFTG 151
+LL++ C C FC + T S++ E ++E I V
Sbjct: 17 LLLQVTVGCAHNKCAFCT------MYRETQFSTESIEQVEKDLKEARKIHKSIKRVFLVN 70
Query: 152 GDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD +L RL+ + + + V+++ ++ + + + EL + K +++
Sbjct: 71 GDAFVLGASRLKPIAEKIIEYFPEVEVITMYAHIN-NIKGKTDEELKELAKLRINDLWVG 129
Query: 211 IHANHPYEF--------SEEAIAAISRLANAGII 236
+ H EEA + RL +AGI
Sbjct: 130 VETGHEEALKYLDKGFNLEEAKEQLKRLGDAGIR 163
>gi|95928217|ref|ZP_01310965.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
gi|95135488|gb|EAT17139.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
Length = 369
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 29/214 (13%), Positives = 61/214 (28%), Gaps = 34/214 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + C + C C + + G + + + + + ++ +GG+
Sbjct: 10 PKWIAWETTRRCNLTCVHCRCSSDMEAASGDFTTEEAFKMIDDICEVSKPV--MVLSGGE 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ + + + LR + I E+ + +A +
Sbjct: 68 PLMRPD------IFEIAEYGTSKGLRMC---MATNGTLITDEVCAKMNKADIKMVSLSLD 118
Query: 214 NHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
E ++ A L GI L S K D L ++
Sbjct: 119 GSTAEIHDDFRQCPGAFEGVKRAAETLTRNGIKFLINSSFTKRNQHDIANTFKLAKSL-- 176
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Y+ + G++I+ L
Sbjct: 177 -GATAWYMFMI----------VPTGRGEEIMNEL 199
>gi|229102763|ref|ZP_04233462.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-28]
gi|228680695|gb|EEL34873.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-28]
Length = 337
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 61/160 (38%), Gaps = 14/160 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ GS + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGSDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIH-- 212
+ L K++ L ++ + + + I ++ + LK + I H
Sbjct: 79 LRKD--LPKLIARLAKLEGLTDIGLTTNG-IHLAKQAKALKVAGLKRVNISLDAIEDHVF 135
Query: 213 --ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + I AG+ + V+ KG+ND
Sbjct: 136 KKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175
>gi|167570715|ref|ZP_02363589.1| molybdenum cofactor biosynthesis protein A [Burkholderia
oklahomensis C6786]
Length = 363
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 37/198 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 36 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 94
Query: 156 ILSHKRLQKVLKTLRYIKHV----QILRFHSRVPIVDP----------QRIN---PELIQ 198
+ + ++ +++ L + V + + ++ R+ L
Sbjct: 95 LRKN--IEFLIERLARMTTVAGRPLDITLTTNGSLLVRKAKSLRDAGLSRVTVSLDALDD 152
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANL 257
L + N S + + I AG + V+ +G ND + +
Sbjct: 153 ALFKR---------MNDADFASADVLDGIFAAQAAGLAPVKVNMVVKRGTNDC--EIVPM 201
Query: 258 MRTFVELRIKPYYLHHPD 275
R F + ++ + D
Sbjct: 202 ARRFKGTGVVLRFIEYMD 219
>gi|167563554|ref|ZP_02356470.1| molybdenum cofactor biosynthesis protein A [Burkholderia
oklahomensis EO147]
Length = 370
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 37/198 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHV----QILRFHSRVPIVDP----------QRIN---PELIQ 198
+ + ++ +++ L + V + + ++ R+ L
Sbjct: 102 LRKN--IEFLIERLARMTTVAGRPLDITLTTNGSLLVRKAKSLRDAGLSRVTVSLDALDD 159
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANL 257
L + N S + + I AG + V+ +G ND + +
Sbjct: 160 ALFKR---------MNDADFASADVLDGIFAAQAAGLAPVKVNMVVKRGTNDC--EIVPM 208
Query: 258 MRTFVELRIKPYYLHHPD 275
R F + ++ + D
Sbjct: 209 ARRFKGTGVVLRFIEYMD 226
>gi|253996369|ref|YP_003048433.1| pyrroloquinoline quinone biosynthesis protein PqqE [Methylotenera
mobilis JLW8]
gi|253983048|gb|ACT47906.1| coenzyme PQQ biosynthesis protein E [Methylotenera mobilis JLW8]
Length = 411
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 77/245 (31%), Gaps = 46/245 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L ++ + CP++C FC+ L+++ AL ++ I + +GG+PL+
Sbjct: 37 LLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARKLGAIQ-LGISGGEPLL 95
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
++ + +R I L E + +H
Sbjct: 96 RDD---------------IEEIVVEARKLGYYSNLITSG--VGLTEKRIQAFKEGGLDHI 138
Query: 217 Y----EFSEEA-------------IAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ +EE + + G ++ V+ + + + +
Sbjct: 139 QLSMHDITEEINNFITNTKTFELKKKVAAMIKGHGYPMVLNVVIHRYNIGHMKEILEMAD 198
Query: 260 TFVELRIKP----YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG------LCQPFY 309
I+ YY + R +EE ++I +EK SG P Y
Sbjct: 199 ALGAEYIELANTQYYGWSLVNRSQLMPTREQVEEAERITNEFREK-SGSKMKIFFVVPDY 257
Query: 310 ILDLP 314
D P
Sbjct: 258 FSDRP 262
>gi|162451211|ref|YP_001613578.1| hypothetical protein sce2939 [Sorangium cellulosum 'So ce 56']
gi|161161793|emb|CAN93098.1| moaA3 [Sorangium cellulosum 'So ce 56']
Length = 373
Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 82/259 (31%), Gaps = 42/259 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + + + C C +C G G +++ ++ + I V TGG+
Sbjct: 58 PRSVRISVTDRCDFACTYCRPSRHDGYADGKLMT-AAWRTMFEALR-DAGIRRVRLTGGE 115
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-H 212
PL+ + ++ L + + L + ++ V I
Sbjct: 116 PLLHP--EIVSIVGCLAALG-FEDLALTTNAS---QLARLAGALRAAGLHRLNVSIDTLD 169
Query: 213 ANHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRI 266
E + + I AG + +V+L+G+NDD L E R+
Sbjct: 170 PGRFGEMTRGGELARVLDGIDAAIAAGFSPIKLNTVVLRGVNDDEIERLALWA--WERRM 227
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIV-------ASLKEKISGLCQPFYILDLPGGYGK 319
P +L I EG ++V A ++ +++ P + G
Sbjct: 228 VPRFLEVM-----------PIAEGARLVGKHLVTAAEMRARLAEHLLPE---EAAAEPG- 272
Query: 320 VKIDT-HNIKKVGNGSYCI 337
+ ++ + S +
Sbjct: 273 --LGPARYVRARRDPSLRV 289
>gi|186475582|ref|YP_001857052.1| molybdenum cofactor biosynthesis protein A [Burkholderia phymatum
STM815]
gi|184192041|gb|ACC70006.1| molybdenum cofactor biosynthesis protein A [Burkholderia phymatum
STM815]
Length = 370
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E A + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRAVFGKDYPFLPHSALLTFEEIERLAAIFVAH-GVEKIRLTGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLARM 116
>gi|228900763|ref|ZP_04064979.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
IBL 4222]
gi|228858863|gb|EEN03307.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
IBL 4222]
Length = 333
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 16 VIDRCNFRCTYCMPAEVFGPDYAFLQEELLLTFDEIERLARLFIS-LGVNKIRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L ++ L ++ ++ + + + Q R+N L +++
Sbjct: 75 LRKD--LPMLIARLAKLEGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDYVF 131
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ + I AG+ + V+ KG+ND
Sbjct: 132 KKINGRNVN-----TKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 171
>gi|228965137|ref|ZP_04126233.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228794570|gb|EEM42080.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 333
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 16 VIDRCNFRCTYCMPAEVFGPDYAFLQEELLLTFDEIERLARLFIS-LGVNKIRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L ++ L ++ ++ + + + Q R+N L +++
Sbjct: 75 LRKD--LPMLIARLAKLEGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDYVF 131
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ + I AG+ + V+ KG+ND
Sbjct: 132 KKINGRNVN-----TKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 171
>gi|229132987|ref|ZP_04261829.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST196]
gi|228650484|gb|EEL06477.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST196]
Length = 337
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L ++ ++ + + + Q + LKEAG
Sbjct: 79 LRKD--LPKLIARLTKLEGLKDIGLTTNGIHLAKQ------ARALKEAGLKRVNISLDAI 130
Query: 212 --H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND
Sbjct: 131 EDHVFRKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175
>gi|75764213|ref|ZP_00743774.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218897135|ref|YP_002445546.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
gi|74488299|gb|EAO51954.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218543554|gb|ACK95948.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
Length = 337
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEELLLTFDEIERLARLFIS-LGVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L ++ L ++ ++ + + + Q R+N L +++
Sbjct: 79 LRKD--LPMLIARLAKLEGLKDIGLTTNGIHLAKQAKALKEAGLKRVNISL-DAIEDYVF 135
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ + I AG+ + V+ KG+ND
Sbjct: 136 KKINGRNVN-----TKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175
>gi|257470893|ref|ZP_05634983.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
ATCC 49185]
gi|317065094|ref|ZP_07929579.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
ATCC 49185]
gi|313690770|gb|EFS27605.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
ATCC 49185]
Length = 324
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 101 LLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C++C R M + +L+ ++ + + I K I ++ TGG+PL+ +
Sbjct: 16 ITDRCNLRCQYCMSERNMNFLPREELLTFEEIKRVVK-IFSKIGIKKIRLTGGEPLVRRN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP--- 216
+L+ + ++ ++ + + ++ LK K + I++ +P
Sbjct: 75 --FSDILENISSVEGIKEINLTTNGLLL-----GENFESLLKNKVKKINISLDTLNPVLY 127
Query: 217 YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
E + ++ + I + GI + VL+KG ND+ + + I+
Sbjct: 128 NEITRGGSLDKVLKNIFKAIELGIERVKINIVLIKGKNDNEIMDFVKFSETYPIDIRFIE 187
Query: 271 LHHPDLAAGTSHFR-LTIEEGQKIVASLK 298
L +F ++ +E KI+ +
Sbjct: 188 LM---PIGEGKNFAPISNDEVIKIIQKER 213
>gi|313900870|ref|ZP_07834360.1| iron-only hydrogenase maturation rSAM protein HydE [Clostridium sp.
HGF2]
gi|312954290|gb|EFR35968.1| iron-only hydrogenase maturation rSAM protein HydE [Clostridium sp.
HGF2]
Length = 362
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 65/218 (29%), Gaps = 25/218 (11%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYP-----DRILLKLLHVCPVYCRFCFRREMVGS 120
E+ I E E ++ HRY R L++ + C C +C R
Sbjct: 24 EVLIHHGENEIRNLLAEYARKT--AHRYYGNKVYTRGLIEFSNYCRNDCYYCGIRRSNSH 81
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR------YIKH 174
+ L +D V+ +G D + + L +++ ++ I
Sbjct: 82 AQRYRLKKEDILTCCDEGYNLGFRTFVLQSGEDGYY-TDELLIEIITDIKRRYPDCAI-- 138
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA- 233
L + + + L HP E + E + A
Sbjct: 139 --TLSLGEKEKESYQCYYDAGADRYLLRHETSNAQHYRCLHPKELTSEHRKQCLKDLKAI 196
Query: 234 ------GIILLSQSVLLKGINDDPEILANLMRTFVELR 265
GI++ S S LK I +D + L V +
Sbjct: 197 GFQTGCGIMVGSPSQTLKHIVEDLHFMKELQPEMVGIG 234
>gi|225028525|ref|ZP_03717717.1| hypothetical protein EUBHAL_02804 [Eubacterium hallii DSM 3353]
gi|224954168|gb|EEG35377.1| hypothetical protein EUBHAL_02804 [Eubacterium hallii DSM 3353]
Length = 450
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 55/135 (40%), Gaps = 26/135 (19%)
Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW 145
+H+ + R +K+ C +C +C + + SK+ E + ++
Sbjct: 144 IHKVNEHTRAYIKIQDGCNQFCSYC-----IIPYTRGRIRSKNPEEVIEEVKNLAAQGYK 198
Query: 146 EVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
E++ TG D L L V+K ++ ++ V+ +R S ++P+ I E ++
Sbjct: 199 EIVLTGIHLSSYGKD---LGTVTLLDVIKRIQQVEDVERIRLGS----LEPRIITEEFVK 251
Query: 199 CLKEAGKPVYIAIHA 213
L + K + H
Sbjct: 252 ELVKCDK---VCPHF 263
>gi|167749297|ref|ZP_02421424.1| hypothetical protein EUBSIR_00248 [Eubacterium siraeum DSM 15702]
gi|167657742|gb|EDS01872.1| hypothetical protein EUBSIR_00248 [Eubacterium siraeum DSM 15702]
Length = 457
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 74/185 (40%), Gaps = 21/185 (11%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ + + ++ ++ + ++ + D +E +E D
Sbjct: 27 VDELTYKLLDYVAPPFAEVCPDDVLAKMDGFDKED---------VKECYTELKELYDAKM 77
Query: 80 ---DNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
++++ + + P + + L + H C + C++CF + ++ + + A+
Sbjct: 78 LFTEDDYEQYAAMAMKAPIKAMCLHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKKAM 137
Query: 136 AYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILR--FHSRVPIVD 188
++ + S EV F GG+PL+ ++ +K R I+ H + R + ++D
Sbjct: 138 DFLIKHSANRENLEVDFFGGEPLMAWDTVVE-TVKYARSIEKQHGKNFRFTITTNGMLLD 196
Query: 189 PQRIN 193
++I+
Sbjct: 197 DEKID 201
>gi|311070188|ref|YP_003975111.1| molybdenum cofactor biosynthesis protein A [Bacillus atrophaeus
1942]
gi|310870705|gb|ADP34180.1| molybdenum cofactor biosynthesis protein A [Bacillus atrophaeus
1942]
Length = 341
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 23/158 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G K +LS ++ E + + ++ TGG+PL
Sbjct: 23 VTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLAKLFVSRFGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + +++K L I V+ + + ++ P + LK AG
Sbjct: 83 MRKD--MPELIKKLARIPGVRDIAMTTNGSLL------PVYAEKLKNAGLHRVTV----- 129
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ G+ + S +L+GI +
Sbjct: 130 --SLDSLEDERFKAINGRGVSV---SKVLEGIEAAKQA 162
>gi|308070144|ref|YP_003871749.1| Fe-S oxidoreductase [Paenibacillus polymyxa E681]
gi|305859423|gb|ADM71211.1| Predicted Fe-S oxidoreductase [Paenibacillus polymyxa E681]
Length = 371
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
H P ++ ++ C + C C R E L+ ++ + + I E + V+F
Sbjct: 10 YHTDPFIVIWEVTRACALKCLHC-RAEAQYKPDPRQLTLEEGKKLIDQIAEMNHPL-VVF 67
Query: 150 TGGDPLILSH 159
TGGDPL+
Sbjct: 68 TGGDPLMRPD 77
>gi|126441374|ref|YP_001059824.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 668]
gi|126220867|gb|ABN84373.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 668]
Length = 377
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 50 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 108
Query: 156 ILSHKRLQKVLKTLRYIKHV 175
+ + L+ +++ L + V
Sbjct: 109 LRKN--LEFLIERLANMTTV 126
>gi|229198890|ref|ZP_04325581.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
gi|228584593|gb|EEK42720.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
Length = 339
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LTKLIARLVKIDGLLDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDIFKAINGRNINTKPVIKGIIAAKEAGLDVKVNMVVKKGMNDH 177
>gi|145631425|ref|ZP_01787195.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021]
gi|144982962|gb|EDJ90471.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021]
Length = 41
Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 15/36 (41%)
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
++ E +I +L+ SG P ++ G K
Sbjct: 2 ISDIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 37
>gi|289642406|ref|ZP_06474552.1| molybdenum cofactor biosynthesis protein A [Frankia symbiont of
Datisca glomerata]
gi|289507751|gb|EFD28704.1| molybdenum cofactor biosynthesis protein A [Frankia symbiont of
Datisca glomerata]
Length = 328
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 27/213 (12%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + + +L+ ++ + + + EV TGG+P L
Sbjct: 18 LTDRCNLRCSYCMPAEGLAWLPRAGILTDEEIVRLVRIAVTRLGVDEVRLTGGEP-TLRP 76
Query: 160 KR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
L L LR + + + + L+ AG + + +
Sbjct: 77 GLVGLVARLARLRPRPQLS---MTTNGIALV------GMAPALRAAGLD-RVNVSLDTLR 126
Query: 218 EFSEEAIAAISRLANA-----------GIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+A+ RLA+A + + +VLL+G+NDD +L+R +
Sbjct: 127 PGRYQALTRRDRLADAQAGLAAVAAAGLVPVKVNAVLLRGVNDD--EAPDLLRWCLRRGY 184
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
+ ++ L S R + G +I+A L+
Sbjct: 185 QLRFIEQMPLDPQHSWDRAAMVTGAEILAGLRG 217
>gi|225619467|ref|YP_002720724.1| molybdenum cofactor biosynthesis protein A [Brachyspira
hyodysenteriae WA1]
gi|225214286|gb|ACN83020.1| molybdenum cofactor biosynthesis protein A [Brachyspira
hyodysenteriae WA1]
Length = 265
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E ++ +L+ + + + + +V TGG+PL+ +
Sbjct: 16 VTDRCNLRCVYCMPEEGIIKKTHSQILTYEQIYNVVKE-ASELGVKKVRITGGEPLVRKN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ +++ +R I V+I+ + ++D
Sbjct: 75 --IDELVAMIRTIDKVEIIAMTTNAVLLD 101
>gi|166031237|ref|ZP_02234066.1| hypothetical protein DORFOR_00924 [Dorea formicigenerans ATCC
27755]
gi|166029084|gb|EDR47841.1| hypothetical protein DORFOR_00924 [Dorea formicigenerans ATCC
27755]
Length = 428
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 59/154 (38%), Gaps = 23/154 (14%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ + +E D + + ++ R +K+ C +C +C + +
Sbjct: 116 HKVKKELLDINHEKEYEEMQVTHTAEHTRAYIKVQDGCNQFCSYC-----IIPYARGRVR 170
Query: 128 SKDTEAALAYIQ--EKSQIWEVIFTGGDPLILSH------KRLQKVLKTLRYIKHVQILR 179
S++ E L ++ S EV+ TG + LS + L ++++ + I ++ +R
Sbjct: 171 SRNLEHVLEEVRTLAASGYKEVVLTG---IHLSSYGIDTGESLLELIQKVHEIDGIKRIR 227
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
S ++P+ I E + K + H
Sbjct: 228 LGS----LEPRIITEEFASSIAALPK---MCPHF 254
>gi|119945837|ref|YP_943517.1| molybdenum cofactor biosynthesis protein A [Psychromonas ingrahamii
37]
gi|189028694|sp|A1SWQ3|MOAA_PSYIN RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|119864441|gb|ABM03918.1| GTP cyclohydrolase subunit MoaA [Psychromonas ingrahamii 37]
Length = 339
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 7/153 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + + LS ++ + E +V TGG+P +
Sbjct: 32 ITDVCNFKCNYCLPDGYQRTHEKQFLSKQEITNLVNAFAELGA-KKVRITGGEPALRKD- 89
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV--PIVDPQRINPELIQCLKEAGKPVYIAI-HANHPY 217
K+++ + I +Q + + Q + + + + H
Sbjct: 90 -FPKIIEAIATIPGIQKVATTTNGYNLSSHAQAWFDAGLDSINVSVDSLDAKTFHLITGK 148
Query: 218 EFSEEAIAAISRLANAGI-ILLSQSVLLKGIND 249
++ + ++ AG + SVL+KG+ND
Sbjct: 149 NIFQKVMQGVNASVKAGFKQVKINSVLMKGLND 181
>gi|229032383|ref|ZP_04188354.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
gi|228728946|gb|EEL79951.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
Length = 339
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I+ + + + + Q + LKEAG
Sbjct: 81 LRKD--LTKLIARLVKIEGLVDIGLTTNAIHLTKQ------AKVLKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|307594418|ref|YP_003900735.1| Radical SAM domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307549619|gb|ADN49684.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429]
Length = 366
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 78/269 (28%), Gaps = 59/269 (21%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P+D EEL + G V + ++L +VC + CR
Sbjct: 23 DPHD---------IEELFRADLWELGSAAEYLTRKYFGNVVTFIPNMILNYTNVCVIACR 73
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
FC + G + LS ++ +A I + I +V+ GG +
Sbjct: 74 FCAFYRLPGHPEAYTLSVEEAVRRVAAIDREFGIRQVLVQGG-------------INPEL 120
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA---- 226
I+ L + LK V I H P E A
Sbjct: 121 DIE------------------YYEGLFKALKAKLPHVAI--HGLSPIEVDYLARKHRMSY 160
Query: 227 ---ISRLANAGI---------ILLSQS-VLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
+ RL AG+ IL+ + + D + N+M T + I
Sbjct: 161 AEVLDRLRGAGMDTLAGGGGEILVDRVRRAIAPHKIDADTWLNIMETAHRMGIMSNATMM 220
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
S + + ++ +S
Sbjct: 221 YGHVETMSDWAEHLYRIIELQRRTHGFLS 249
>gi|325968826|ref|YP_004245018.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
gi|323708029|gb|ADY01516.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 412
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 27/188 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
I + + C + C C+ + G + + + E AL + + ++ +I +GG+P
Sbjct: 38 IFWNITYRCNLKCIHCYINAIQGISRDELTT----EEALRVVDDAHELRTPLLIISGGEP 93
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ + +V++ ++ + + + I + LKE G Y+ I +
Sbjct: 94 LVRED--ITEVMRRASDYD-IK-VSLSTNGTL-----ITRDWALKLKELGTQ-YVGISID 143
Query: 215 HPY-EF----------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P E + A+ I + GI + ++ + K D + L
Sbjct: 144 SPIPEIHDKIRGIPGAWDLAVKGIKNIMEVGIPVGIRTTVTKLNIDHAPEVIELAHRLGI 203
Query: 264 LRIKPYYL 271
R+ Y+L
Sbjct: 204 SRVAFYHL 211
>gi|323474371|gb|ADX84977.1| Fe-S oxidoreductase family [Sulfolobus islandicus REY15A]
gi|323476690|gb|ADX81928.1| Radical SAM domain protein [Sulfolobus islandicus HVE10/4]
Length = 350
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 72/197 (36%), Gaps = 27/197 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ CP+ C+ C R + L+++++ L I ++ ++FTGGD
Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKVV-IVFTGGD 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL S L + K+L + R++ E ++ + + Y++I
Sbjct: 65 PLSRSDIFELMEYAKSLG---------LVVSIAPSPSHRLDDETMKMISNYTR--YMSIS 113
Query: 213 ANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + + A+ I GI + +++ K + + L
Sbjct: 114 LDGATSQTHDWLRGLGSYKYALRGIELGLKYGIQVQVNTLVWKKSYSELPFVVKL---LK 170
Query: 263 ELRIKPYYLHHPDLAAG 279
E+ +K + +
Sbjct: 171 EMGVKIWEVFFLIPVGR 187
>gi|118088023|ref|XP_419475.2| PREDICTED: similar to molybdenum cofactor synthesis-step 1 protein
[Gallus gallus]
Length = 724
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 26/152 (17%)
Query: 55 PIARQFIPQK-----------------EELNILPEEREDPIGDNNHSPL----KGIVHRY 93
+ RQ P++ EL R S G H Y
Sbjct: 58 AVRRQVCPRRLRPVVGRCGSPPPGGRLSELQSSGRARFLLEHAAPFSAFLTDSFGRQHNY 117
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L C + C++C E V + L + LA + K + ++ TGG+
Sbjct: 118 LRISL---TEKCNLRCQYCMPEEGVQLTPKSELLTAQEIITLAGLFVKEGVEKIRLTGGE 174
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PLI ++ L ++ ++ + +
Sbjct: 175 PLIRPDVV--DIVGQLYKLEGLKTIAVTTNGI 204
>gi|23097891|ref|NP_691357.1| hypothetical protein OB0436 [Oceanobacillus iheyensis HTE831]
gi|22776115|dbj|BAC12392.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 376
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 79/227 (34%), Gaps = 40/227 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
++C + C C + L + E L I + + TGG+P +++
Sbjct: 36 FTTTYMCNMRCAHCAVGYTLQQMDPDALPMELIEKRLDEI---PHLRTLSITGGEP-MMN 91
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215
K +++ + L H + ++ + P E++ L +H +H
Sbjct: 92 KKSVRQYVLPLLKYAHERGIKTQMNSNLTLPYNRYEEIVPYLD--------VLHISHNWG 143
Query: 216 ----------------PYEFSEE-----AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
P E + + RL+ G+++ ++++L K E +
Sbjct: 144 TVEEFAETGFALMDRKPSEENRAKYFDRMVENAQRLSKEGVMVSAETMLNKRTFPHLESI 203
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRL-TIEEGQKIVASLKEK 300
+ + +E+ + +H + + +++E ++ + L
Sbjct: 204 HDHV---LEMGCARHEIHPMYPVDFAENLEILSLDEMREGITRLLNH 247
>gi|331088429|ref|ZP_08337344.1| molybdenum cofactor biosynthesis protein A [Lachnospiraceae
bacterium 3_1_46FAA]
gi|330408196|gb|EGG87684.1| molybdenum cofactor biosynthesis protein A [Lachnospiraceae
bacterium 3_1_46FAA]
Length = 323
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y RI + C + C +C E +LS ++ E I + I ++
Sbjct: 4 QYGRRIDYMRVSVTDRCNLRCVYCMPGEGFSFLPHEDILSFEEIERVCR-IGVRLGITKI 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
TGG+PL+ + + ++ L+ I + + + I+ ++IN
Sbjct: 63 KLTGGEPLVR--RGIPDLVGKLKGIPGIDEVTLTTNG-ILLKEQINE 106
>gi|317501686|ref|ZP_07959877.1| molybdenum cofactor biosynthesis protein A [Lachnospiraceae
bacterium 8_1_57FAA]
gi|316896937|gb|EFV19017.1| molybdenum cofactor biosynthesis protein A [Lachnospiraceae
bacterium 8_1_57FAA]
Length = 326
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y RI + C + C +C E +LS ++ E I + I ++
Sbjct: 7 QYGRRIDYMRVSVTDRCNLRCVYCMPGEGFSFLPHEDILSFEEIERVCR-IGVRLGITKI 65
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
TGG+PL+ + + ++ L+ I + + + I+ ++IN
Sbjct: 66 KLTGGEPLVR--RGIPDLVGKLKGIPGIDEVTLTTNG-ILLKEQINE 109
>gi|229175442|ref|ZP_04302955.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3]
gi|228608050|gb|EEK65359.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3]
Length = 339
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I+ + + + + Q + LKEAG
Sbjct: 81 LRKD--LTKLIARLVKIEGLVDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDVFKDINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|323451692|gb|EGB07568.1| hypothetical protein AURANDRAFT_37684 [Aureococcus anophagefferens]
Length = 420
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 8/121 (6%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIW 145
G H Y L C + CR+C E V G +LS+ + E +
Sbjct: 83 GRRHTYLRLSL---TERCNLRCRYCMPAEGVSDLTPGGELLSAGEIERVASVFARAGA-T 138
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+V TGG+P + L ++ + + V+ + + + + L+ L +AG
Sbjct: 139 KVRLTGGEPTLRRD--LTQICGAIAALPGVESVGVTTNGINLLRKEGAGALLDNLVDAGL 196
Query: 206 P 206
Sbjct: 197 T 197
>gi|220903568|ref|YP_002478880.1| Radical SAM domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867867|gb|ACL48202.1| Radical SAM domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 414
Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 69/206 (33%), Gaps = 24/206 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I ++ C + C+ C G LS+ + +A + E + +IFTGGDP+I
Sbjct: 61 IAWEVTRSCNLACKHCRAEAHPEPYPGE-LSTAEAKALIDTFTEVGKPI-IIFTGGDPMI 118
Query: 157 LSHKRLQKVLKTLRYIKHVQI--LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--H 212
+ L H + F ++ P+ + I+ + I
Sbjct: 119 RPD------VYELVAYAHSKGLPCAFSPNGTLITPE--TAQKIKNAGVNRCSISIDGADA 170
Query: 213 ANH------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
A+H P F E ++ I L AG+ + + + + + L +
Sbjct: 171 ASHDSFRGVPGAF-EASMRGIEYLKAAGVPFQINTTVTRNNLTSFKKIFELCE---RIGA 226
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQK 292
+++ + + Q+
Sbjct: 227 AAWHIFLLVPMGRAAGLADQVITAQE 252
>gi|295103385|emb|CBL00929.1| GTP cyclohydrolase subunit MoaA [Faecalibacterium prausnitzii
SL3/3]
Length = 325
Score = 45.7 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
RY I + +C + CR+C + ++ VL+ ++ A + I V
Sbjct: 4 RYQREIHYLRLSVTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLRLAALFAQC-GIDTVR 62
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
TGG+PL+ + + +++ L+ ++ + + ++ Q
Sbjct: 63 VTGGEPLVRKN--VAQLVAGLKATPGIRRVTLTTNAVLLAEQ 102
>gi|74317041|ref|YP_314781.1| GTP cyclohydrolase subunit MoaA [Thiobacillus denitrificans ATCC
25259]
gi|74056536|gb|AAZ96976.1| Elongator protein 3/MiaB/NifB [Thiobacillus denitrificans ATCC
25259]
Length = 327
Score = 45.7 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFT 150
R+ D + L + C + C +C G ++ L + E L + V T
Sbjct: 12 RHIDYVRLSVTDRCDLRCSYCMPEGFKGFEEPADWLDFDEIERLLGAFAR-LGVRRVRLT 70
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
GG+PL+ + + + + + ++ L +
Sbjct: 71 GGEPLLRRD--ISGLARRIASLPGIEDLSLSTNAT 103
>gi|317063767|ref|ZP_07928252.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC
49185]
gi|313689443|gb|EFS26278.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC
49185]
Length = 474
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 39/262 (14%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILL----KLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
+ + + + K Y RI++ + + C C +C + L+ +
Sbjct: 63 NPELLEEMFETARKIKEKIYGKRIVMFAPLYVSNYCVNNCEYCGYKHDNDELSRKKLNRE 122
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ + +++ + G DPL S L +L+ ++ I ++ R V+
Sbjct: 123 ELIEEVKSLEKLGHKRIALEAGEDPLNCS---LDYILECIKDIYSIKFKNGSIRRINVNI 179
Query: 190 QRINPELIQCLKE------------AGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-I 236
E + LKE KP Y +H N P E A+ R AGI
Sbjct: 180 AATTVENYKRLKEAEIGTYILFQETYHKPTYERVHLNGPKRDYEYHTTAMFRAREAGIDD 239
Query: 237 LLSQSVLLKGINDDPEILANLMR---TFVEL-RIKPYYLHHPDL-------AAGTSHFRL 285
+ +L G+ D +++R + + P+ + P L H +
Sbjct: 240 VG--IGVLYGLYDFKYETISMIRYADALERITGVGPHTISVPRLRAAENVSLKDYPHL-V 296
Query: 286 TIEEGQKIVASLKEKISGLCQP 307
+ E+ +K+VA L+ L P
Sbjct: 297 SDEDFKKLVAVLR-----LAVP 313
>gi|293115612|ref|ZP_05792317.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus
DSM 2876]
gi|292809090|gb|EFF68295.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus
DSM 2876]
Length = 444
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 26/148 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ + +A I+ S EV+ TG
Sbjct: 146 HTRAYVKIQDGCNRFCSYC-----IIPYVRGRIRSRKPDDVMAEIKRVAASGCKEVVLTG 200
Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
D S +L V++ + I+ ++ +R S ++P + E ++ L
Sbjct: 201 IHLSSYGLDFKD----STVKLIDVIEAVNRIEGIERIRLGS----LEPLIVTEEFVRRLA 252
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISR 229
+ K + H + E R
Sbjct: 253 KC-KKICPHFHLSLQSGCDETLKRMNRR 279
>gi|308808442|ref|XP_003081531.1| Cnx2, molybdenum cofactor biosynthesis protein (IC) [Ostreococcus
tauri]
gi|116059997|emb|CAL56056.1| Cnx2, molybdenum cofactor biosynthesis protein (IC) [Ostreococcus
tauri]
Length = 376
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIW 145
G H Y L C + C +C E V + G +L++ + E + +I ++ +
Sbjct: 57 HGRGHNYLRISL---TERCNLRCAYCMPAEGVDLTPDGRLLTASEVERLV-HIFARAGVD 112
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+V TGG+P + L+ +++ + V+ + + +
Sbjct: 113 KVRLTGGEPTVRRD--LEDIVRRVSAAPGVRDVSVTTNGVAL 152
>gi|182419316|ref|ZP_02950569.1| heme biosynthesis [Clostridium butyricum 5521]
gi|237667748|ref|ZP_04527732.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376956|gb|EDT74527.1| heme biosynthesis [Clostridium butyricum 5521]
gi|237656096|gb|EEP53652.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 453
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 12/152 (7%)
Query: 64 KEELNILPE-EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+EL ED + HS + Y I L ++H C + C++CF E
Sbjct: 65 IQELAEDGILYSEDQYEEIAHSSMD--DRDYIKAICLNVIHGCNLRCKYCFADEGEYHGH 122
Query: 123 GTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKH--VQI 177
G V+S + + A+ Y+ ++S E+ GG+P L ++++++K R + +
Sbjct: 123 GGVMSVETAKKAIDYVIKRSGPRKNIEIDLFGGEP-TLIMDKIKEIIKYARDNEEKWGKR 181
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+RF + + PE++ + + + +
Sbjct: 182 IRFT---MTTNATLLTPEMMDYMDKEMGNIIL 210
>gi|170041251|ref|XP_001848384.1| molybdopterin cofactor synthesis protein a [Culex quinquefasciatus]
gi|167864830|gb|EDS28213.1| molybdopterin cofactor synthesis protein a [Culex quinquefasciatus]
Length = 553
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 78/232 (33%), Gaps = 40/232 (17%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKS 142
+ G H Y L C + C++C E V + K ++L++ + LA + +
Sbjct: 33 TDKFGRFHSYLRISL---TERCNLRCKYCMPEEGVPLTAKDSLLTTDEVLR-LAGLFVRE 88
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ ++ TGG+P + L ++ L+ I ++ + + ++ Q +
Sbjct: 89 GVRKIRLTGGEPTVRKD--LTDIVAALKRIPSLESVGITTNGLMLTRQLV---------- 136
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLAN--------AGIILLSQ--------SVLLKG 246
G N A R+ AGI L Q VL+KG
Sbjct: 137 -GLQRAGLDGLN--ISLDTLKAAKYERITRRKGWERVIAGIDLAIQLGYKPKVNCVLMKG 193
Query: 247 INDDPEI-LANLMR-TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
NDD + R V++R Y + + + E +
Sbjct: 194 FNDDELCDFVEMTRDRCVDIRFIEYMPFTGNRWDTSE--MVPFREALATIRE 243
>gi|251781169|ref|ZP_04824089.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243085484|gb|EES51374.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 326
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I + C + C++C ++ V Q +L+ + + + I +
Sbjct: 4 QYNRTIDYLRISVTDRCNLRCKYCMPKDGVEYLQHDEILTFDEIITICKSMVK-LGIRNI 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
TGG+PL+ + ++K ++ IK ++ + S ++
Sbjct: 63 KITGGEPLVRKD--IVNLIKDIKSIKGIENVTLTSNGILLY 101
>gi|188588003|ref|YP_001920495.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
E3 str. Alaska E43]
gi|188498284|gb|ACD51420.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
E3 str. Alaska E43]
Length = 326
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I + C + C++C ++ V Q +L+ + + + I +
Sbjct: 4 QYNRTIDYLRISVTDRCNLRCKYCMPKDGVEYLQHDEILTFDEIITICKSMVK-LGIRNI 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
TGG+PL+ + ++K ++ IK ++ + S ++
Sbjct: 63 KITGGEPLVRKD--IVNLIKDIKSIKGIENVTLTSNGILLY 101
>gi|321313219|ref|YP_004205506.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis BSn5]
gi|320019493|gb|ADV94479.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis BSn5]
Length = 341
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 23/158 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G K +LS ++ E + + ++ TGG+PL
Sbjct: 23 VTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + +++K L I ++ + + ++ P + LKEAG
Sbjct: 83 MRKD--MPELIKKLARIPGIRDIAMTTNGSLL------PVYAKRLKEAGLKRVTI----- 129
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
++ G+ + S +L+GI +
Sbjct: 130 --SLDSLEDERFKKINGRGVSV---SKVLEGIEAAKQA 162
>gi|296331307|ref|ZP_06873779.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305676293|ref|YP_003867965.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296151422|gb|EFG92299.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305414537|gb|ADM39656.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 341
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 23/158 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G K +LS ++ E + + ++ TGG+PL
Sbjct: 23 VTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + +++K L I V+ + + ++ P + LKEAG
Sbjct: 83 MRKD--MPELIKKLARIPGVRDIAMTTNGSLL------PVYAERLKEAGLKRVTI----- 129
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
++ G+ + S +L+GI +
Sbjct: 130 --SLDSLEDERFKKINGRGVSV---SKVLEGIEAAKQA 162
>gi|238026593|ref|YP_002910824.1| molybdenum cofactor biosynthesis protein A [Burkholderia glumae
BGR1]
gi|237875787|gb|ACR28120.1| Molybdenum cofactor biosynthesis protein A [Burkholderia glumae
BGR1]
Length = 370
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 37/198 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R++ +LS ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRDVFDKDYPFLPHSALLSLEELERVARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI----KHVQILRFHSRVPIVDPQ----------RIN---PELIQ 198
+ + L+ +++ L + H L + ++ + R+ L
Sbjct: 102 LRKN--LEFLIERLARMQTVGGHPLDLTLTTNGSLLARKARSLRDAGLTRVTVSLDALDD 159
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANL 257
L N S + + I +AG + V+ +G ND + +
Sbjct: 160 ALFRR---------MNDANFASADVLEGIFAAQDAGLAPVKVNMVVKRGTND--AEIVPM 208
Query: 258 MRTFVELRIKPYYLHHPD 275
R F I ++ + D
Sbjct: 209 ARRFKGTGIVLRFIEYMD 226
>gi|291486249|dbj|BAI87324.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. natto BEST195]
Length = 341
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 23/158 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G K +LS ++ E + + ++ TGG+PL
Sbjct: 23 VTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + +++K L I ++ + + ++ P + LKEAG
Sbjct: 83 MRKD--MPELIKKLARIPGIRDIAMTTNGSLL------PVYAKRLKEAGLKRVTI----- 129
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
++ G+ + S +L+GI +
Sbjct: 130 --SLDSLEDERFKKINGRGVSV---SKVLEGIEAAKQA 162
>gi|167630503|ref|YP_001681002.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
gi|167593243|gb|ABZ84991.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
Length = 446
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 24/135 (17%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIF 149
R R +K+ C +YC +C + + S+ E+ + + E++
Sbjct: 144 RSRARATIKIQDGCDLYCTYC-----IIPYARGPVRSRRIESVVEEATRLTGEGFKEIVL 198
Query: 150 TGGDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+G + L + L K++ L I ++ +R S V+PQ PEL++ +
Sbjct: 199 SG---IHLGAYGSDFNADLAKLIVELCRIPGLRRIRVGS----VEPQEFTPELLEAVVHP 251
Query: 204 GKPVYIAIHANHPYE 218
+ H + P +
Sbjct: 252 R----VCPHFHIPLQ 262
>gi|157785651|ref|NP_001099130.1| molybdenum cofactor biosynthesis protein 1 [Danio rerio]
gi|156788953|gb|ABU96048.1| molybdenum cofactor synthesis step-1 variant 1 [Danio rerio]
Length = 402
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C ++ V + L + D +A + + + ++
Sbjct: 83 GRRHNYLRISL---TEKCNLRCQYCMPQDGVKLTPRSQLLTTDELLTVARLFVQEGVNKI 139
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI + ++ LR ++ ++ + +
Sbjct: 140 RITGGEPLIRPD--ILHIIAELRKLEGLKTIAVTTNGM 175
>gi|16080723|ref|NP_391551.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. 168]
gi|221311629|ref|ZP_03593476.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. 168]
gi|221315956|ref|ZP_03597761.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221320868|ref|ZP_03602162.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221325153|ref|ZP_03606447.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. SMY]
gi|730103|sp|P39757|MOAA_BACSU RecName: Full=Molybdenum cofactor biosynthesis protein A;
Short=Protein narA
gi|516272|emb|CAA84540.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
gi|1648856|emb|CAB03683.1| MoaA-like protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2636195|emb|CAB15687.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. 168]
Length = 341
Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 23/158 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ G K +LS ++ E + + ++ TGG+PL
Sbjct: 23 VTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + +++K L I ++ + + ++ P + LKEAG
Sbjct: 83 MRKD--MPELIKKLARIPGIRDIAMTTNGSLL------PVYAKRLKEAGLKRVTI----- 129
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
++ G+ + S +L+GI +
Sbjct: 130 --SLDSLEDERFKKINGRGVSV---SKVLEGIEAAKQA 162
>gi|300790323|ref|YP_003770614.1| molybdenum cofactor biosynthesis protein A [Amycolatopsis
mediterranei U32]
gi|299799837|gb|ADJ50212.1| molybdenum cofactor biosynthesis protein A [Amycolatopsis
mediterranei U32]
Length = 335
Score = 45.3 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 76/216 (35%), Gaps = 37/216 (17%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + VL+ + + E + ++ TGG+PL+
Sbjct: 24 LTDRCNLRCTYCMPAEGLDWMPGEQVLTDDELLRLMRIAVEMLGVTDIRLTGGEPLLRP- 82
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP-----------------QRINPELIQCLKE 202
L+ ++ + + L + + ++PEL + +
Sbjct: 83 -GLEDLVAQITALSPRPRLSMTTNGIGLARRAAGLAEAGLNRINVSLDTVDPELFKTITR 141
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTF 261
+ +H IA ++ +AG + +VL++G+N+ + L++
Sbjct: 142 RDR-------LSH-------VIAGLAAARDAGMAPVKVNAVLIRGLNETEAV--PLLKFC 185
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
++ ++ L A R + +I+ L
Sbjct: 186 LDEGYHLRFIEQMPLDAQHGWNRGEMITAAEILEKL 221
>gi|291531854|emb|CBK97439.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Eubacterium siraeum
70/3]
Length = 457
Score = 45.3 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 75/185 (40%), Gaps = 21/185 (11%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ + + ++ ++ I ++ + +D +E +E D
Sbjct: 27 VDELTYKLLDYVAPPFADVCPDEIIAKMDGFDKDD---------VKECYQELKELYDAKM 77
Query: 80 ---DNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
++++ + + P + + L + H C + C++CF + ++ + + A+
Sbjct: 78 LFTEDDYEQYAAMAMKAPIKAMCLHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKRAM 137
Query: 136 AYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILR--FHSRVPIVD 188
++ + S EV F GG+PL+ ++ +K R I+ H + R + ++D
Sbjct: 138 DFLIKHSANRENLEVDFFGGEPLMAWDTVVE-TVKYARSIEKQHGKNFRFTITTNGMLLD 196
Query: 189 PQRIN 193
++I+
Sbjct: 197 DEKID 201
>gi|317489825|ref|ZP_07948322.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
gi|316911074|gb|EFV32686.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
Length = 334
Score = 45.3 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 35/198 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C C++ LS ++ + + I + +IF+GG+PL+
Sbjct: 3 VSWMTTNKCNLKCVHCYQDAE--EATDKELSCEEGKKMIDEIAR-AGFKVMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG--------KP 206
+ L + LR F S + I PE+ LKEAG
Sbjct: 60 RPD------IYELVAHAASRGLRPVFGSNGTL-----ITPEVAVRLKEAGACAMGISVDS 108
Query: 207 VYIAIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ H H Y+ + I AG+ + ++ D+ + +
Sbjct: 109 LDAVKHDRFRGLEHAYDLTMA---GIEACKQAGLPFQLHTTVVDWNRDEVCDITDFA--- 162
Query: 262 VELRIKPYYLHHPDLAAG 279
VE+ +Y+
Sbjct: 163 VEIGAMAHYVFFLIPVGR 180
>gi|257057375|ref|YP_003135207.1| GTP cyclohydrolase subunit MoaA [Saccharomonospora viridis DSM
43017]
gi|256587247|gb|ACU98380.1| GTP cyclohydrolase subunit MoaA [Saccharomonospora viridis DSM
43017]
Length = 339
Score = 45.3 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 3/90 (3%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +L+ + + + +V TGG+PL+
Sbjct: 28 VTDKCNLRCTYCMPAEGLEWMPDQRLLTDDEIVRLIDIAVRLLGVTDVRLTGGEPLLRP- 86
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
RL+ ++ + ++ L +
Sbjct: 87 -RLEGLVARIAALRPRPRLAMTTNGIGFAK 115
>gi|257062911|ref|YP_003142583.1| GTP cyclohydrolase subunit MoaA [Slackia heliotrinireducens DSM
20476]
gi|256790564|gb|ACV21234.1| GTP cyclohydrolase subunit MoaA [Slackia heliotrinireducens DSM
20476]
Length = 333
Score = 45.3 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 65/169 (38%), Gaps = 20/169 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + CR+C E V + +LS ++ E + + I + TGG+PL+
Sbjct: 16 LTDRCNLRCRYCMPEEGVSALSHEDILSLEEIERIIR-VAAGMGISRLRLTGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE---AGKPVYIAI----- 211
K + ++K ++ + + ++ P++ LKE + + +
Sbjct: 73 KGIAGLIKEAMRTPGIESVALTTNGILL------PKMAAELKEAGLSRVNISLDTLDEEQ 126
Query: 212 -HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258
H + +A I AG + +V+++ +N D A +
Sbjct: 127 FHYITRRGHVADVMAGIDAALEAGFNPVKINAVVVRSLNQDLYEFARMS 175
>gi|187935397|ref|YP_001885363.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum B
str. Eklund 17B]
gi|187723550|gb|ACD24771.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum B
str. Eklund 17B]
Length = 326
Score = 45.3 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I + C + C++C +E V Q +L+ + + + I +
Sbjct: 4 QYNRTIDYLRISVTDRCNLRCKYCMPKEGVEYLQHDEILTFDEIITICKSMVK-LGIHNI 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
TGG+PL+ + ++K ++ IK ++ + S ++
Sbjct: 63 KITGGEPLVRKD--IVNLIKDIKSIKGIENVTLTSNGILLY 101
>gi|295092927|emb|CBK82018.1| MiaB-like tRNA modifying enzyme [Coprococcus sp. ART55/1]
Length = 452
Score = 45.3 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 60/155 (38%), Gaps = 23/155 (14%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ E D + + + G V R +K+ C +C +C + +
Sbjct: 130 HEAMEYFVDISRETEYEEMGGHVPVGHTRAYVKIQDGCNQFCSYC-----IIPYVRGRIR 184
Query: 128 SKDTEAALAYIQ--EKSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQIL 178
S+ EA LA + ++ I EV+ TG D + L ++++ + IK ++ +
Sbjct: 185 SRSQEAILAEVSELAEAGIKEVVLTGIHISSYGKD--KNNEGALIELIEAISKIKGIKRI 242
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
R S ++P I E ++ + K + H
Sbjct: 243 RLGS----LEPGIITEEFVERISSNSK---VCPHF 270
>gi|229825163|ref|ZP_04451232.1| hypothetical protein GCWU000182_00514 [Abiotrophia defectiva ATCC
49176]
gi|229790535|gb|EEP26649.1| hypothetical protein GCWU000182_00514 [Abiotrophia defectiva ATCC
49176]
Length = 479
Score = 45.3 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 17/145 (11%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRR 115
I + +EL + + I + ++ + ++ L + H C + CR+CF
Sbjct: 74 IISEIKELQEDGQLFTEDIYEKYVKDF-----KHRNTVVKALCLNIAHDCNLACRYCFAG 128
Query: 116 EMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTGGDPLI--LSHKRLQKVLKTLR 170
E ++S + +AA ++ + EV F GG+PL+ + K L + L
Sbjct: 129 EGEYQGDRGMMSYEVGKAAFDFLIKNSGHRKNLEVDFFGGEPLMNWNTVKMLVAYGRELE 188
Query: 171 YIKHVQILRF--HSRVPIVDPQRIN 193
I H + RF + +++ + I+
Sbjct: 189 KI-HDKNFRFTLTTNGMLLNDEIID 212
>gi|291522320|emb|CBK80613.1| GTP cyclohydrolase subunit MoaA [Coprococcus catus GD/7]
Length = 322
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C + + +L+ ++ E I +V TGG+P + +
Sbjct: 16 VTDRCNLRCRYCMPPDGISCLPMREILTYEEIEHLCRIFAA-LGIHKVKITGGEPFVRKN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ +++ ++ I + + + +
Sbjct: 75 --ICHLIRRIKQIPGIDSVTLTTNGTLALHH 103
>gi|62184901|ref|YP_219686.1| hypothetical protein CAB260 [Chlamydophila abortus S26/3]
gi|62147968|emb|CAH63716.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
Length = 421
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 20/131 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + S+ + L I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYC-----IIPYLRGRSRSRPVQEILEEISGLVSQGYREVVIAG 188
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL-----KEA 203
GD K L ++ + I ++ +R S +DP+ + +L L
Sbjct: 189 INVGD-YQDQGKSLAYLISQVDEIPGIERIRISS----IDPEDVQDDLRDVLLSGKHTCH 243
Query: 204 GKPVYIAIHAN 214
+ + +N
Sbjct: 244 SSHLVLQSGSN 254
>gi|257469523|ref|ZP_05633615.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC
49185]
Length = 469
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 39/262 (14%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILL----KLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
+ + + + K Y RI++ + + C C +C + L+ +
Sbjct: 58 NPELLEEMFETARKIKEKIYGKRIVMFAPLYVSNYCVNNCEYCGYKHDNDELSRKKLNRE 117
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ + +++ + G DPL S L +L+ ++ I ++ R V+
Sbjct: 118 ELIEEVKSLEKLGHKRIALEAGEDPLNCS---LDYILECIKDIYSIKFKNGSIRRINVNI 174
Query: 190 QRINPELIQCLKE------------AGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-I 236
E + LKE KP Y +H N P E A+ R AGI
Sbjct: 175 AATTVENYKRLKEAEIGTYILFQETYHKPTYERVHLNGPKRDYEYHTTAMFRAREAGIDD 234
Query: 237 LLSQSVLLKGINDDPEILANLMR---TFVEL-RIKPYYLHHPDL-------AAGTSHFRL 285
+ +L G+ D +++R + + P+ + P L H +
Sbjct: 235 VG--IGVLYGLYDFKYETISMIRYADALERITGVGPHTISVPRLRAAENVSLKDYPHL-V 291
Query: 286 TIEEGQKIVASLKEKISGLCQP 307
+ E+ +K+VA L+ L P
Sbjct: 292 SDEDFKKLVAVLR-----LAVP 308
>gi|256825802|ref|YP_003149762.1| GTP cyclohydrolase subunit MoaA [Kytococcus sedentarius DSM 20547]
gi|256689195|gb|ACV06997.1| GTP cyclohydrolase subunit MoaA [Kytococcus sedentarius DSM 20547]
Length = 338
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ VC + C +C + G + VL ++ I ++ TGG+PL
Sbjct: 21 VTDVCNLRCTYCLPEVVDGWLPRAEVLDREELVRLARIGTRTLGIEKIRLTGGEPLTRPD 80
Query: 160 KRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKE---AGKPVYIAIHANH 215
L +++ L R + V+ L + + L+E + V + H
Sbjct: 81 --LVEIVADLHRALPEVE-LALTTNGLGL------ARKAGALREAGLSRVNVSLDTVDRH 131
Query: 216 -PYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ + +E + +S AG+ + V +GINDD L +L+ VE +
Sbjct: 132 TYAQITRRGRLDEVLEGLSAAVAAGLTPVKVNCVPTRGINDDG--LLDLVDHCVETGCEL 189
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
++ + A R + Q++ A + +
Sbjct: 190 RFIEQMPIGAPRDWARENLVTAQEVRAQVATR 221
>gi|163939949|ref|YP_001644833.1| molybdenum cofactor biosynthesis protein A [Bacillus
weihenstephanensis KBAB4]
gi|163862146|gb|ABY43205.1| molybdenum cofactor biosynthesis protein A [Bacillus
weihenstephanensis KBAB4]
Length = 337
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 61/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L K++ L ++ ++ + + + Q R+N L +++
Sbjct: 79 LRKD--LPKLIARLTKLEGLKDIGLTTNGIHLAKQARSLKEAGLKRVNISL-DAIEDHVF 135
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + I AG+ + V+ KG+ND
Sbjct: 136 RK-----INGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175
>gi|291556614|emb|CBL33731.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Eubacterium siraeum
V10Sc8a]
Length = 457
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 75/185 (40%), Gaps = 21/185 (11%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ + + ++ ++ I ++ + +D +E +E D
Sbjct: 27 VDELTYKLLDYVAPPFADVCPDEIIAKMDGFDKDD---------VKECYQELKELYDAKM 77
Query: 80 ---DNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
++++ + + P + + L + H C + C++CF + ++ + + A+
Sbjct: 78 LFTEDDYEQYAAMAMKAPIKAMCLHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKKAM 137
Query: 136 AYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILR--FHSRVPIVD 188
++ + S EV F GG+PL+ ++ +K R I+ H + R + ++D
Sbjct: 138 DFLIKHSANRENLEVDFFGGEPLMAWDTVVE-TVKYARSIEKQHGKNFRFTITTNGMLLD 196
Query: 189 PQRIN 193
++I+
Sbjct: 197 DEKID 201
>gi|284162371|ref|YP_003400994.1| radical SAM protein [Archaeoglobus profundus DSM 5631]
gi|284012368|gb|ADB58321.1| Radical SAM domain protein [Archaeoglobus profundus DSM 5631]
Length = 462
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 100/273 (36%), Gaps = 43/273 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I+ + + C + C+ C+ G L++++ A+ I + + + F+GG+
Sbjct: 110 PFLIVWDVTYACNLKCKHCYSTA--GKPWKDELNTQEALRAME-ILADAGVTAIAFSGGE 166
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PLI L K ++ H + + ++ + + + ++ L + +
Sbjct: 167 PLIRKDFFELAKAVR-----DHGMFVAVATNGTLLTKENV--QKLKDLGVWFVQISLDGT 219
Query: 213 ANHPYEFS------EEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELR 265
F E+ + I AG I +S + D P+I+ +L
Sbjct: 220 KETHESFRGIRGIYEKVVEGIKNCVEAGLITCISTTATKLNYQDIPKIM-DLAEEL---G 275
Query: 266 IKPYYLHHPDLAAGTSH-FRLTIEEGQKIVASLKEKI--SGLCQ----PFYILDL----- 313
++ + L++ L+ EE ++++ L ++ +G+ P+Y
Sbjct: 276 VQWFMLYNFIPVGRGDFEMDLSAEEKERLLRELWSRLKSTGINFMSTAPYYARVAIQEES 335
Query: 314 ---------PGGYGKVKIDTHNIKKVGNGSYCI 337
P GK+K+ I G G + +
Sbjct: 336 EIVPTHFYNPKLEGKLKVLADFIGGCGCGRFYL 368
>gi|228960999|ref|ZP_04122629.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798716|gb|EEM45699.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 339
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LTKLIARLVKIDGLIDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|228955004|ref|ZP_04117021.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229072231|ref|ZP_04205438.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus F65185]
gi|229081982|ref|ZP_04214473.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-2]
gi|228701359|gb|EEL53854.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-2]
gi|228710888|gb|EEL62856.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus F65185]
gi|228804731|gb|EEM51333.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 339
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LTKLIARLVKIDGLIDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|229193012|ref|ZP_04319968.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10876]
gi|228590459|gb|EEK48322.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10876]
Length = 339
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LTKLIARLVKIDGLIDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|206969465|ref|ZP_03230419.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
gi|206735153|gb|EDZ52321.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
Length = 334
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E LA + + ++ TGG+PL
Sbjct: 17 VIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 75
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 76 LRKD--LTKLIARLVKIDGLIDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDAI 127
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 128 DDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 172
>gi|329731179|gb|EGG67549.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis VCU144]
gi|329735413|gb|EGG71704.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis VCU028]
Length = 340
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDDYTFLPKNELLTFEELTR-ISKIYAQLGVKKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ + L K+++ L I ++ + + LK+ GK +Y
Sbjct: 79 LRRN--LYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLY 116
>gi|119897898|ref|YP_933111.1| molybdenum cofactor biosynthesis protein A [Azoarcus sp. BH72]
gi|119670311|emb|CAL94224.1| molybdenum cofactor biosynthesis protein A [Azoarcus sp. BH72]
Length = 357
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 27/177 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE+ +G +LS ++ + + ++ TGG+PL
Sbjct: 41 VTDRCNFRCVYCMPREVFDKDYPFLPRGQLLSFEEILRVARLFVAR-GVRKIRITGGEPL 99
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ ++++++ L + V+ L + ++ P L + L++AG
Sbjct: 100 LRKD--IERLVEMLAALDGVE-LTLTTNGVLL------PRLAKKLRDAGLHRVTVSLDAL 150
Query: 212 ------HANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGIND-DPEILANLMRT 260
N E + I+ +AG + V+ +G ND D E +A R
Sbjct: 151 DDATFRRMNDADYPVERVLEGIAAARDAGFEGIKVNMVVKRGTNDQDIEAMAQHFRG 207
>gi|148225025|ref|NP_001086201.1| molybdenum cofactor synthesis 1 [Xenopus laevis]
gi|49258030|gb|AAH74319.1| MGC84142 protein [Xenopus laevis]
Length = 389
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y + + + C + C++C E V + L + LA + + + ++
Sbjct: 70 GRQHNY---LRISVTEKCNLRCQYCMPEEGVKLTPKSELLTTQEIVTLAKLFVREGVDKI 126
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ LR ++ ++ + +
Sbjct: 127 RLTGGEPLIRPDVV--DIVAQLRKLEGLKTIALTTNGI 162
>gi|27468759|ref|NP_765396.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis ATCC 12228]
gi|57867756|ref|YP_189412.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis RP62A]
gi|251812031|ref|ZP_04826504.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875324|ref|ZP_06284197.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis SK135]
gi|293368414|ref|ZP_06615039.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis M23864:W2(grey)]
gi|38258081|sp|Q8CNE6|MOAA_STAES RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|81673523|sp|Q5HLY1|MOAA_STAEQ RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|27316307|gb|AAO05482.1|AE016750_87 molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis ATCC 12228]
gi|57638414|gb|AAW55202.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis RP62A]
gi|251804479|gb|EES57136.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis BCM-HMP0060]
gi|281296089|gb|EFA88610.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis SK135]
gi|291317489|gb|EFE57910.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329737046|gb|EGG73301.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis VCU045]
Length = 340
Score = 45.3 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDDYTFLPKNELLTFEELTR-ISKIYAQLGVKKIRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ + L K+++ L I ++ + + LK+ GK +Y
Sbjct: 79 LRRN--LYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLY 116
>gi|94311377|ref|YP_584587.1| molybdenum cofactor biosynthesis protein A [Cupriavidus
metallidurans CH34]
gi|93355229|gb|ABF09318.1| molybdopterin biosynthesis protein A [Cupriavidus metallidurans
CH34]
Length = 395
Score = 45.3 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRR 115
IP + L P ++ G+V R L + + C C +C +
Sbjct: 26 VIPILD-LRDHRYRSMVPSIPSHLVAPNGLVADTRGRPLHDLRISVTDRCNFRCVYCMPK 84
Query: 116 EMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
E+ +LS ++ E I + ++ TGG+PL+ + ++++++ L
Sbjct: 85 EVFDKDYTFLPHSELLSFEEIERTAR-IFVSQGVEKIRLTGGEPLLRKN--IERLVEMLA 141
Query: 171 YIKHV 175
I+ V
Sbjct: 142 RIETV 146
>gi|291549892|emb|CBL26154.1| MiaB-like tRNA modifying enzyme [Ruminococcus torques L2-14]
Length = 450
Score = 45.3 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 25/130 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ E L ++ + EV+ TG
Sbjct: 162 HTRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRSMEDVLDEVRTLADNGYKEVVLTG 216
Query: 152 GDPLILS--------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ LS L ++++ + I ++ +R S ++P I E + + +
Sbjct: 217 ---IHLSSYGIDFDKEYHLLELIRAVHEIDGIERIRLGS----LEPGIITEEFAEGIAKL 269
Query: 204 GKPVYIAIHA 213
K + H
Sbjct: 270 PK---MCPHF 276
>gi|155241764|gb|ABT18046.1| heme d1 biosynthesis protein [Heliobacillus mobilis]
Length = 331
Score = 45.3 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 76/213 (35%), Gaps = 41/213 (19%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C ++C C+R G++ LS+ + + L I + + +IF+GG+PL+
Sbjct: 3 ISWNTTNQCNMFCDHCYRDA--GAKAEQELSTVEGKQLLDEIAK-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ L + LR F + + I E+ + LK+AG + + I +
Sbjct: 60 RPD------IVELVAYATSKGLRSVFGTNGTL-----ITREMARDLKKAG-AMGMGISLD 107
Query: 215 H-----PYEF------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
EF +EA+ + G+ + +++ + + + VE
Sbjct: 108 SMDKKKHDEFRRYPGAWDEAVRGMENCRAEGLGFQIHTTVMEWNRHEVSTITDFA---VE 164
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ ++ F + I
Sbjct: 165 IGAVGHHTF----------FLVPTGRAVDIEEE 187
>gi|320354791|ref|YP_004196130.1| nitrogenase cofactor biosynthesis protein NifB [Desulfobulbus
propionicus DSM 2032]
gi|320123293|gb|ADW18839.1| nitrogenase cofactor biosynthesis protein NifB [Desulfobulbus
propionicus DSM 2032]
Length = 425
Score = 45.3 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 91/258 (35%), Gaps = 40/258 (15%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+ELN P G R+ L + C + C +C R+ ++
Sbjct: 5 KELNRHPCFNVKAKGQ-------------YGRVHLPVAPKCNIQCNYCNRKFDCVNESRP 51
Query: 125 VLSSKDT--EAALAY----IQEKSQIWEVIFTG-GDPLILSHKRLQ----------KVLK 167
++S E AL Y ++++ +I V G GDP + L +++
Sbjct: 52 GVTSTLLSPEQALVYVDKVVEKEPRISVVGIAGPGDPFANPDETLATMRLIRTHHPEMIL 111
Query: 168 TLRY-----IKHV-QILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPYEFS 220
L HV ++ + I+PE+ Q + + +
Sbjct: 112 CLSTNGMHLAPHVPELAEIGVSHVTITVNAIDPEISQHIYAWVRDGKVLYRGLQGAELLL 171
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
+ AI+ L GI + ++++ GIND + L T EL + A T
Sbjct: 172 ARQLRAIALLKRHGITVKINTIVIPGINDHH--VPVLAATMKELGVDLLNCMAMFPNADT 229
Query: 281 SHFRLTIEEGQKIVASLK 298
+ F E G++++ ++
Sbjct: 230 A-FEHIQEPGKEMMERIR 246
>gi|154175462|ref|YP_001408235.1| hypothetical protein CCV52592_1067 [Campylobacter curvus 525.92]
gi|112802784|gb|EAU00128.1| conserved hypothetical protein [Campylobacter curvus 525.92]
Length = 416
Score = 45.3 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 14/144 (9%)
Query: 81 NNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAA 134
+ +S K IV Y + + +K+ C C +C R + + ++++ AA
Sbjct: 117 DLNSIDKNIVTSYENHTKAFIKIQEGCNFACSYCIIPSVRGKARSMDENSIINEAKILAA 176
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
Y + + G D L ++L L I ++ +R S ++P +I+
Sbjct: 177 NGYNELVLTGTNIGSYGKDTG----SSLGRLLANLGKIPGIRRIRLGS----IEPSQIDE 228
Query: 195 ELIQCLKEAGKPVYIAIHANHPYE 218
+ LKE+ ++ I H E
Sbjct: 229 SFREILKESWLERHLHIALQHTSE 252
>gi|300817404|ref|ZP_07097621.1| radical SAM domain protein [Escherichia coli MS 107-1]
gi|300530030|gb|EFK51092.1| radical SAM domain protein [Escherichia coli MS 107-1]
Length = 372
Score = 45.3 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWE----V 147
D IL+K C + C +C+ + ++ E + I E S + E +
Sbjct: 3 DTILIKTASRCNLDCTYCYVYRGADTSWQDQPYRMNDATIEKVVERITEYSLLQETGFAI 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI 172
+ GG+PL+L +RL+ +L LR +
Sbjct: 63 VLHGGEPLLLGERRLESLLSGLRRV 87
>gi|322707051|gb|EFY98630.1| molybdenum cofactor biosynthesis protein 1 B [Metarhizium
anisopliae ARSEF 23]
Length = 754
Score = 45.3 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 49/323 (15%), Positives = 105/323 (32%), Gaps = 40/323 (12%)
Query: 47 INPHNPNDPIARQFI--PQKEELNILPEEREDPIGD-------NNHSPLKGIV----HRY 93
+ P + RQ + E D N P + HR
Sbjct: 23 MVWRYP-CSLRRQIVSSASAHEDISQVSGSLDAAVSLSRRDRIRNAKPFSEFLTDTFHRQ 81
Query: 94 PDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
D + + + C + C +C E V S +L++ + L+ I + ++ TGG
Sbjct: 82 HDYLRISVTERCNLRCVYCMPEEGVPLSPNRELLTTPEI-VMLSSIFVSQGVNKIRLTGG 140
Query: 153 DPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+P + L + + LR + ++ L + + R +++ G + +
Sbjct: 141 EPTVRRDILSLMRQIGALRP-RGLKQLCLTTNGISL--HRKLDSMVEA-GLTGVNLSLDT 196
Query: 212 ------HANHPYEFSEEAIAAISRLAN-----AGIILLSQSVLLKGINDDPEI-LANLMR 259
+ + +I R+ AGI L V+++G+ND + L R
Sbjct: 197 LDPWQFQIMTRRKGFDAVQKSIERILEMNKVGAGIKLKINCVVMRGVNDREVLPFVELTR 256
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+L ++ D + +E ++ + + GL + + D K
Sbjct: 257 E-KDLEVRFIEYMPFDGNKWNKGKMFSYDEMLDLI---RGQFPGLAK---VKDDKNDTSK 309
Query: 320 VKIDTHNIKKVGNGSYCITDHHN 342
+ ++G + +
Sbjct: 310 TWHIPGFVGRIGFITSMTHNFCG 332
>gi|87198947|ref|YP_496204.1| GTP cyclohydrolase subunit MoaA [Novosphingobium aromaticivorans
DSM 12444]
gi|87134628|gb|ABD25370.1| GTP cyclohydrolase subunit MoaA [Novosphingobium aromaticivorans
DSM 12444]
Length = 339
Score = 44.9 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQEKSQI 144
++ R+ RI + C + C +C M K VLS ++ L +I +
Sbjct: 12 LIDRFARRITYLRLSVTDRCDLRCAYCMPERMEFLPKAEVLSLEELHRLSLHFIAR--GV 69
Query: 145 WEVIFTGGDPLILSH---------KRLQKVLKTLRYIKHVQILR-FHSRVPIVDPQRINP 194
++ TGG+PL+ ++L L L + L F + +RIN
Sbjct: 70 RKIRLTGGEPLVRRDMVDLVRALGRKLGDGLDELTMTTNGTRLAEFAGDLAAAGLRRINV 129
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
L +EA + + + + I+ AG+ + +V LKGIN+D
Sbjct: 130 SLDTLDREAFARL-------SRRDVLPQVLEGIAAAREAGLRVKINAVALKGINED 178
>gi|116753747|ref|YP_842865.1| radical SAM domain-containing protein [Methanosaeta thermophila PT]
gi|116665198|gb|ABK14225.1| Radical SAM domain protein [Methanosaeta thermophila PT]
Length = 365
Score = 44.9 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+P ++L + C + C +C+ G + + A+ + E + ++V GG
Sbjct: 22 HPRTLILWVTTDCNLRCVYCYAN---GGDNKAYMGWDVAKRAIDLVAEGADCFKVQLAGG 78
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI--- 209
+PL L+ +++++ + + ++ + + I+P + L+ G V +
Sbjct: 79 EPL-LNFGLIERIVFYIHDLGADASIQLQTNATL-----ISPAIASRLRALGIGVGVSLD 132
Query: 210 -AIHAN-HPYEF------SEEAIAAISRLANAGIILLSQSVL----LKGINDDPEILANL 257
N H F + I I L +AGI + SVL +KG++ ++ + L
Sbjct: 133 GVPAINDHLRPFADGHGSTHSVINGIRNLRDAGISVGMTSVLSSTSVKGLSSLVDLASYL 192
>gi|218289231|ref|ZP_03493466.1| molybdenum cofactor biosynthesis protein A [Alicyclobacillus
acidocaldarius LAA1]
gi|218240579|gb|EED07759.1| molybdenum cofactor biosynthesis protein A [Alicyclobacillus
acidocaldarius LAA1]
Length = 341
Score = 44.9 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 68/213 (31%), Gaps = 34/213 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
L C C +C ++ G ++S + + + + +V TGG+PL
Sbjct: 23 LTDRCNFRCPYCMPSDVFGPDYPFLRPDALMSPDEIAKLVRALVP-LGLEKVRLTGGEPL 81
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + + ++++ + + + + + ++ E LK AG
Sbjct: 82 LR--REVIEIVEKVAAVPGLHEIAMTTNGSLL-----TREKAMSLKRAGLTRITV----S 130
Query: 216 PYEFSEEAIAAISRLA--------------NAG-IILLSQSVLLKGINDDPEILANLMRT 260
+ A ++ + AG + V+ +G N+D +
Sbjct: 131 LDALRPDVAARMNGVRFPVHRVLSAIEAADEAGLAPVKVNVVVRRGWNEDEVVAIA--ER 188
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
F + ++ + D+ + +I
Sbjct: 189 FRGTGVIVRFIEYMDVGTTNGWRMEDVVTADQI 221
>gi|94969171|ref|YP_591219.1| hypothetical protein Acid345_2144 [Candidatus Koribacter versatilis
Ellin345]
gi|123381489|sp|Q1IPQ5|RIMO_ACIBL RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|94551221|gb|ABF41145.1| SSU ribosomal protein S12P methylthiotransferase [Candidatus
Koribacter versatilis Ellin345]
Length = 504
Score = 44.9 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 21/144 (14%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ- 139
+ ++P +Y +K+ C C FC + Q S+ E+ +A +
Sbjct: 192 DENTPRVLATPKY--MAYIKVAEGCDHPCSFC-----IIPQLRGKFRSRRFESVVAEAER 244
Query: 140 -EKSQIWEVIFTGGDP------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
K + E+ G D L L L ++L+ L I+ +Q +RF P +I
Sbjct: 245 LAKQGVKEITLIGQDTTCYGEDLGLKDG-LAQLLERLAQIEELQWVRF----LYAYPNKI 299
Query: 193 NPELIQCLKEAGK-PVYIAIHANH 215
L+Q + + K P Y+ + H
Sbjct: 300 TKRLLQTIADNPKIPKYMDVPLQH 323
>gi|328952311|ref|YP_004369645.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328452635|gb|AEB08464.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 291
Score = 44.9 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 35/235 (14%), Positives = 66/235 (28%), Gaps = 33/235 (14%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
Y R+ L + C + C +C R+ G + + + ++ I
Sbjct: 20 RHYFGRLHLPVAAGCNIQCGYCDRKYDCPNESRPGVTSQLLTPQEAIDHVEFILKNHPTI 79
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLR-YIKHVQIL----------------RFHSRVPI 186
V G GD L+ VL +R + + R
Sbjct: 80 SVVGIAGPGDAFHNPAVTLE-VLARIRAAHPDIILCVSTNGLNLPDYVDYLSRLRVNFVT 138
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR---LANAGIILLSQSVL 243
V + P + + + + P + + L G+ + +V+
Sbjct: 139 VTINTLTPAIGTRIYDYISHHGRIVQG--PEAVTILTRLQLQAISLLKRKGLRVKVNTVI 196
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+ GIND L + R+ L GT + +V L+
Sbjct: 197 IPGINDADISLTAA--RLADYRVDLMNLIPLIPVPGTPLADIPPPSA-ALVQQLR 248
>gi|332970129|gb|EGK09123.1| molybdenum cofactor biosynthesis protein A [Desmospora sp. 8437]
Length = 345
Score = 44.9 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQ--EKSQIWEVIFTGGDPLI 156
+ C CR+C E+ G + + E L ++ + +V TGG+PL+
Sbjct: 26 VTDRCNFRCRYCMPAEVFGPDYPFLPREELLTFEEILRLVRLFVAGGVEKVRITGGEPLL 85
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
L ++++ ++ ++ ++ + + ++ Q
Sbjct: 86 RRD--LPRLVEMVKGVEGIRDVALTTNASLLAGQ 117
>gi|330835443|ref|YP_004410171.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
gi|329567582|gb|AEB95687.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
Length = 352
Score = 44.9 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 97/286 (33%), Gaps = 53/286 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++L+ C + CR C + G L++++ ++ + + S + + +GGD
Sbjct: 4 PYVVVLESTKACDLACRHCRANALPNRLPGE-LTTEEVKSLVEDLSS-SGVKLFVVSGGD 61
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSR----VPIVDPQRINPELIQCLKEAGKPVYI 209
L +ILR+ SR RIN ++ + +KE G + +
Sbjct: 62 ALKRDDIF--------------EILRYSSRRLNTALSPSGSRINLDVAKKIKETGVSI-V 106
Query: 210 AIHANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+I + P E +E A AI L G+ + + + K + ++L ++
Sbjct: 107 SISVDGPEEVHDEFRGVKGAFKMAKGAIESLKEVGVPVQINTTISKYNVEKLDLLREVVE 166
Query: 260 TFVELRIKPYYLHHPDLAAG-TSHFRLTIEEGQKIVASLKEKIS-GLCQ-----PFYILD 312
F + + T ++ ++ + ++ + E S GL P+ +
Sbjct: 167 GF---NPAFWDIFMLIPTGRATKEMMISPDQAEIVMKRVTEWRSDGLNVRMTCAPYLVRV 223
Query: 313 LPGGYGKVKIDTHNIKKV----------GNGSYCITDHHNIVHDYP 348
+ + I Y + YP
Sbjct: 224 MNELNVTNPLPPDRIYGRRSVNGARGCMAGNGYAFISYDG--TVYP 267
>gi|298385134|ref|ZP_06994693.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 1_1_14]
gi|298262278|gb|EFI05143.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 1_1_14]
Length = 164
Score = 44.9 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
++ YP+ I+ L C +C C E + G +L+ + ++ + I+
Sbjct: 12 HLLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKA 71
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP L
Sbjct: 72 NPLLDGVTFSGGDPFYNPEAFL 93
>gi|269956621|ref|YP_003326410.1| molybdenum cofactor biosynthesis protein A [Xylanimonas
cellulosilytica DSM 15894]
gi|269305302|gb|ACZ30852.1| molybdenum cofactor biosynthesis protein A [Xylanimonas
cellulosilytica DSM 15894]
Length = 380
Score = 44.9 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 89/234 (38%), Gaps = 31/234 (13%)
Query: 81 NNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALA 136
+ + G+V R+ + L C + C +C E + K V+S + +
Sbjct: 42 ADRPHVPGLVDRFGRTATDLRVSLTDRCNLRCTYCMPAEGLPTLPKDAVMSRTEIARLVG 101
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
+ + +V FTGG+PL+ + L +++ + + + + +D +
Sbjct: 102 VATRELGVRQVRFTGGEPLLRAD--LVDIVRDVAALPQRPEISLTTNAVGLDHR------ 153
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR---LAN--AGI--------ILLSQSVL 243
+ L++AG + A ++R L AGI ++ +VL
Sbjct: 154 ARALRDAGLDRVNI----SLDTLDPDTFARLARRPFLERTLAGISAAAEVFDVIKINAVL 209
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
++G+N D A+L+ +E + ++ L A + R + ++ L
Sbjct: 210 VRGLNLDH--AADLLAWCLERGFELRFIEQMPLDADHAWDRAAMVTAAEVRRQL 261
>gi|167581126|ref|ZP_02374000.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis TXDOH]
Length = 370
Score = 44.9 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLK 201
+ + ++ +++ L + V + + ++ R+ L L
Sbjct: 102 LRKN--IEFLIERLAKMTTVDGRALDITLTTNGSLLVRKAKSLRDAGLSRVTVSL-DALD 158
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A + L+ + V+ +G ND + + R F
Sbjct: 159 DTLFKRMNDADFASADVLDGIFAAHAAGLS----PVKVNMVVKRGTND--AEIVPMARRF 212
Query: 262 VELRIKPYYLHHPD 275
+ ++ + D
Sbjct: 213 KGTGVVLRFIEYMD 226
>gi|83721219|ref|YP_442241.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis E264]
gi|167619209|ref|ZP_02387840.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis Bt4]
gi|257138434|ref|ZP_05586696.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis E264]
gi|83655044|gb|ABC39107.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis E264]
Length = 370
Score = 44.9 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLK 201
+ + ++ +++ L + V + + ++ R+ L L
Sbjct: 102 LRKN--IEFLIERLAKMTTVDGRALDITLTTNGSLLVRKAKSLRDAGLSRVTVSL-DALD 158
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A + L+ + V+ +G ND + + R F
Sbjct: 159 DTLFKRMNDADFASADVLDGIFAAHAAGLS----PVKVNMVVKRGTND--AEIVPMARRF 212
Query: 262 VELRIKPYYLHHPD 275
+ ++ + D
Sbjct: 213 KGTGVVLRFIEYMD 226
>gi|330990520|ref|ZP_08314478.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp.
SXCC-1]
gi|329762423|gb|EGG78909.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp.
SXCC-1]
Length = 358
Score = 44.9 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 45/132 (34%), Gaps = 16/132 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLI 156
++ C C +C + + + + +A + + + ++ TGG+PL+
Sbjct: 30 VMDRCNFRCPYCMPKATYHEGFRFLGPKERLDFDEIERVARMAAELGVTKIRLTGGEPLL 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L +++ L + ++ + + ++ P L++AG
Sbjct: 90 RP--GLPDLVRRLGALPGIEDVALTTNGVLL------PRFAPALRQAGLQRVTV----SL 137
Query: 217 YEFSEEAIAAIS 228
A +S
Sbjct: 138 DSLDPAVFAHMS 149
>gi|190574699|ref|YP_001972544.1| putative molybdenum cofactor biosynthesis protein A
[Stenotrophomonas maltophilia K279a]
gi|226707389|sp|B2FUM0|MOAA_STRMK RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|190012621|emb|CAQ46249.1| putative molybdenum cofactor biosynthesis protein A
[Stenotrophomonas maltophilia K279a]
Length = 326
Score = 44.9 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 29/223 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G +P L C C +C + L + + + ++
Sbjct: 7 GFGRSFPYLRLSL-TEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAA-LGMSKI 64
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR---INPELIQCLKEAG 204
TGG+P + L +++ T+ + ++ + + + P+R + + L +
Sbjct: 65 RLTGGEPSLRKD--LDEIIATVAAVPGIRKVAITTNG-TLLPRRLPGWHRAGLTALNVSM 121
Query: 205 KPVYIAIHANHPYEFS-----EEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLM 258
+ + E ++ G+ + +VLL+G+NDD L
Sbjct: 122 DSL----QRERFKTITGHDRLPEIEQGLALAQALGLPAIKLNAVLLRGLNDD-----ELP 172
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
+ LR +P+ R E L+ +
Sbjct: 173 QWMDYLRGRPFS------VRFIELMRTGDNEAYFQRHHLRADV 209
>gi|118581347|ref|YP_902597.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504057|gb|ABL00540.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
Length = 358
Score = 44.9 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 62/214 (28%), Gaps = 28/214 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + C + C C R S+++ + L I + S+ V+ +GG+
Sbjct: 7 PKWIAWETTQKCNLRCVHC-RCSSELDSSQGDFSTQEGKTLLREIADFSKPV-VVLSGGE 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR------INPELIQCLKEAGKP 206
PL+ L + +L + + +V + + +++ +
Sbjct: 65 PLMRPDIFELARCGTSLG-----LRMCMATNGSLVTKETCRDMAGADIKMVSLSLDGSSA 119
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
P F A G L S + D L +
Sbjct: 120 AIHDDFRQCPGAFDGVVRA-AELFRAHGQKFLINSSFTRRNQHDIAATFRLAKQL---GA 175
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+Y+ + G++I+ L K
Sbjct: 176 TAWYMFMI----------VPTGRGEEIMNELISK 199
>gi|118443956|ref|YP_878198.1| tRNA modifying protein [Clostridium novyi NT]
gi|238065369|sp|A0Q0P6|RIMO_CLONN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|118134412|gb|ABK61456.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium novyi
NT]
Length = 444
Score = 44.9 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 17/130 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
+++ C C +C + + S+ E+ + + + E+I G
Sbjct: 144 KHMAYIRISEGCNNLCTYC-----IIPKIRGKYRSRSIESIINEAKELANMGVKELILVG 198
Query: 152 GD-PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + S RL ++L+ L I+ ++ +R P+ I ELI+ +K K
Sbjct: 199 QDTAIYGSDLYKENRLSQLLRELSNIEDIEWIRI----LYTYPEEITDELIEEIKNNDKV 254
Query: 207 V-YIAIHANH 215
Y+ I H
Sbjct: 255 CKYLDIPIQH 264
>gi|229096672|ref|ZP_04227643.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-29]
gi|228686878|gb|EEL40785.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-29]
Length = 337
Score = 44.9 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 61/160 (38%), Gaps = 14/160 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ GS + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCIYCMPAEVFGSDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIH-- 212
+ L K++ L ++ + + + I ++ + LK + I H
Sbjct: 79 LRKD--LPKLIARLAKLEGLTDIGLTTNG-IHLAKQAKALKVAGLKRVNISLDAIEDHVF 135
Query: 213 --ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + I AG+ + V+ KG+ND
Sbjct: 136 KKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175
>gi|222100234|ref|YP_002534802.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359]
gi|221572624|gb|ACM23436.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359]
Length = 437
Score = 44.9 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 62 PQKEELNILPEERE--------DPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110
P EL+ E+ D + + +RY DR L + L H C C
Sbjct: 27 PSSAELSKAEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 86
Query: 111 FCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--R 161
+C+++ ++ G+ +S K D E L Y +K + V F GG+PL+L
Sbjct: 87 YCYQK-VIHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVN 143
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L LK L V+ F + + + +++ L++AG
Sbjct: 144 LSSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 182
>gi|148270585|ref|YP_001245045.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
gi|170289289|ref|YP_001739527.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
gi|281412894|ref|YP_003346973.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
gi|147736129|gb|ABQ47469.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
gi|170176792|gb|ACB09844.1| Radical SAM domain protein [Thermotoga sp. RQ2]
gi|281373997|gb|ADA67559.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
Length = 454
Score = 44.9 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 62 PQKEELNILPEERE--------DPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110
P EL+ E+ D + + +RY DR L + L H C C
Sbjct: 44 PSSAELSKAEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 103
Query: 111 FCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--R 161
+C+++ ++ G+ +S K D E L Y +K + V F GG+PL+L
Sbjct: 104 YCYQK-VIHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVN 160
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L LK L V+ F + + + +++ L++AG
Sbjct: 161 LSSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 199
>gi|94266923|ref|ZP_01290577.1| Radical SAM [delta proteobacterium MLMS-1]
gi|93452399|gb|EAT03016.1| Radical SAM [delta proteobacterium MLMS-1]
Length = 351
Score = 44.9 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 66/216 (30%), Gaps = 35/216 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ C + C C + ++ + + L I +Q V+ +GG+
Sbjct: 5 PKWLAWEITRRCNLNCVHCRSSSELEAKGHPDFDFTEAKRILDDITSYAQPV-VVLSGGE 63
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210
PL+ + + + LR + + E+ + LKE G +
Sbjct: 64 PLLRDD------VFDIAAYGTEKGLRMC---LATNGTLVTDEVCRRLKEVGIRMVSMSLD 114
Query: 211 -----IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+H N P F I A I L S K D + L +
Sbjct: 115 GADAKVHDNFRSQPGAFD-GTINATRLFREHEIPFLFNSSFTKRNQADIPRVYRLAKEL- 172
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Y+ + G+ I++ L
Sbjct: 173 --GATAWYMFMI----------VPTGRGEDILSELI 196
>gi|297559628|ref|YP_003678602.1| RNA modification enzyme, MiaB family [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296844076|gb|ADH66096.1| RNA modification enzyme, MiaB family [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 480
Score = 44.9 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 62/207 (29%), Gaps = 39/207 (18%)
Query: 49 PHNPNDPIARQFIP-QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI---------- 97
PH+P D R +P E + + +G Y +
Sbjct: 121 PHDPRD--RRTLLPISPAERDASQAHVPGHASFAESAGAEGTELPYRASVPRRRLVGGPV 178
Query: 98 -LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
LK+ C C FC G+ D ++ + EV
Sbjct: 179 ANLKIASGCDRRCTFCAIPTFRGAYLSRRP--DDIVREAEWLAS-EGVREVFLVSENSTS 235
Query: 151 -GGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207
G D L R L+K+L L ++ ++ +R + P + P L+ L V
Sbjct: 236 YGKD---LGDVRALEKLLPRLAAVEGLERVRV----SYLQPAEVRPGLVDVLTGTPGVVP 288
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAG 234
Y + H + + R+ G
Sbjct: 289 YFDLSFQHA------SGTLLRRMRRFG 309
>gi|254521757|ref|ZP_05133812.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas sp.
SKA14]
gi|219719348|gb|EED37873.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas sp.
SKA14]
Length = 326
Score = 44.9 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 29/223 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G +P L C C +C + L + + + ++
Sbjct: 7 GFGRSFPYLRLSL-TEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAA-LGMSKI 64
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR---INPELIQCLKEAG 204
TGG+P + L +++ T+ + ++ + + + P+R + + L +
Sbjct: 65 RLTGGEPSLRKD--LDEIIATVAAVPGIRKVAITTNG-TLLPRRLPGWHRAGLTALNVSM 121
Query: 205 KPVYIAIHANHPYEFS-----EEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLM 258
+ + E ++ G+ + +VLL+G+NDD L
Sbjct: 122 DSL----QRERFRTITGHDRLPEIEQGLALAQALGLPAIKLNAVLLRGLNDD-----ELP 172
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
+ LR +P+ R E L+ +
Sbjct: 173 QWMDYLRDRPFS------VRFIELMRTGDNEAYFQRHHLRADV 209
>gi|299148082|ref|ZP_07041145.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 3_1_23]
gi|298514265|gb|EFI38151.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 3_1_23]
Length = 152
Score = 44.9 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
++ YP+ I L C +C C E G L+ + ++ + I+
Sbjct: 2 NLLGTYPETIVDGEGIRYSIYLAGCSHHCPGCHNPESWNPGAGEELTEEKIQSIIREIKA 61
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP + L
Sbjct: 62 NPLLDGVTFSGGDPFFHPEEFL 83
>gi|227542935|ref|ZP_03972984.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
51866]
gi|227181157|gb|EEI62129.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
51866]
Length = 413
Score = 44.9 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 31/205 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGG 152
P ++ ++ C + C+ C R + L+ ++ + L + + + V+FTGG
Sbjct: 18 PFIVIWEVTRACALVCKHC-RADAQHEPHPDQLTMEEGKRLLDQLASYEKPYPLVVFTGG 76
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DP S L L L + ++ PE + L+EAG
Sbjct: 77 DPFERSD------LAELCQYGTDLGLSISLSPSVT--PKVTPERLHELREAGGKAMSM-- 126
Query: 213 ANHPYEFSEEAIAAISRLANA--------------GIILLSQSVLLKGINDDPEILANLM 258
+ E A + G L S L KG + L+
Sbjct: 127 --SLDGATPETHDAFRGFSGTFDATLEKAPLINAEGYRLQINSTLTKG---NIHEAPALL 181
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHF 283
+ +E++ K +Y+ +
Sbjct: 182 KRVIEMQAKMWYVFFLVPTGRGADL 206
>gi|229172864|ref|ZP_04300418.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3]
gi|228610609|gb|EEK67877.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3]
Length = 337
Score = 44.9 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 66/165 (40%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ GS + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGSDYAFLQEEFLLTFNEIERLARLFIGM-GVEKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP---VYIAIH 212
+ L K++ L ++ ++ + + + Q + LK+AG + +
Sbjct: 79 LRKD--LPKLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKDAGLKRVNISLDAI 130
Query: 213 ANHPYE-------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+H ++ ++ + I AG+ + V+ KG+N+
Sbjct: 131 EDHVFQKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNNS 175
>gi|313673752|ref|YP_004051863.1| gtp cyclohydrolase subunit moaa [Calditerrivibrio nitroreducens DSM
19672]
gi|312940508|gb|ADR19700.1| GTP cyclohydrolase subunit MoaA [Calditerrivibrio nitroreducens DSM
19672]
Length = 327
Score = 44.9 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 25/183 (13%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYI 138
N + G +RY + + + C C++C + +L +D AL I
Sbjct: 1 MNELTDKYGRTYRY---LRVSVTDRCNFRCKYCIPTHNFKFIEHKQILRYEDLIFALK-I 56
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP--------- 189
K I ++ TGG+PL+ K L +K+++ ++ + + +++
Sbjct: 57 FSKYGIKKIRLTGGEPLVR--KGLTNFIKSIKSETDIEEITLTTNGSLLNQFAVELKKAG 114
Query: 190 -QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGI 247
RIN L LK + I N I +AG + +VL+KG
Sbjct: 115 INRINVSL-DSLKPERYQL-ITGGFNLNNIID-----GIKAAQDAGLFPIKINTVLIKGF 167
Query: 248 NDD 250
NDD
Sbjct: 168 NDD 170
>gi|229076235|ref|ZP_04209202.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-18]
gi|228706884|gb|EEL59090.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-18]
Length = 339
Score = 44.9 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 26/166 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFTGGDP 154
++ C C +C E+ G + I+ + ++ TGG+P
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPD--YAFLKDEFLLTFDEIERLAKVFVSIGVRKIRLTGGEP 79
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
L+ L K++ L I + + + + Q + LKEAG
Sbjct: 80 LLRKD--LTKLIARLVKIDGLVDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDA 131
Query: 212 -------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 132 IDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|254173709|ref|ZP_04880381.1| metallo cofactor biosynthesis protein [Thermococcus sp. AM4]
gi|214032401|gb|EEB73231.1| metallo cofactor biosynthesis protein [Thermococcus sp. AM4]
Length = 400
Score = 44.9 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 46/311 (14%), Positives = 105/311 (33%), Gaps = 74/311 (23%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-IFT 150
R P + + C + C+ C R E + LS+++ +A + + + + + + I T
Sbjct: 13 RKPVLVFWETTKACQLKCKHC-RAEAILQALPGELSTEEGKALIDSLTDFGRPYPILILT 71
Query: 151 GGDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GGDPL+ + + ++ + +R + + E I+ + +G
Sbjct: 72 GGDPLMRKDIFELIDYAVE--------KGVRVGLAPAVT--PLLTEETIERIARSGVK-A 120
Query: 209 IAIHANHPY----------EFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
++I + P+ E + E + AI G+ + +V+++ + + L
Sbjct: 121 VSISLDSPFPDVHDAIRGIEGTWEKTVWAIKEFLKHGLSVQVNTVVMRETVEGLPEMVKL 180
Query: 258 MRTFVELRIKPYYLHHPDLAAG----------------------TSHFRLTIEEG----- 290
+L ++ + + + + H + EG
Sbjct: 181 ---LKDLGVEIWEVFYLVPTGRGNFESDLRPEEWEDVTHFLYEASKHLLVRTTEGPMFRR 237
Query: 291 QKIVASLKEKISGL-----CQP--------FYILDLPGGYGKVKIDTHNIKKVGNGSYCI 337
I+ E+ GL +P +++L GG G + +
Sbjct: 238 VAIMRKALEER-GLDPDEVLKPGELYFRLKKRLVELLGGGG--EARAQTMGTRDGKGIVF 294
Query: 338 TDHHNIVHDYP 348
++ V YP
Sbjct: 295 IAYNGNV--YP 303
>gi|307730551|ref|YP_003907775.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1003]
gi|307585086|gb|ADN58484.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1003]
Length = 369
Score = 44.9 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 19/124 (15%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCF 113
R+ IP + P+ G++H R L + + C C +C
Sbjct: 3 RRIIPVAD-------LSAAPVISGPLQTPSGVLHDTLARPLRDLRISVTDRCNFRCVYCM 55
Query: 114 RREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
R + +LS ++ E + ++ TGG+PL+ + L+ +++
Sbjct: 56 PRAIFDKDYAFLPHSALLSFEEIERLARLFVAH-GVEKIRLTGGEPLLRKN--LEFLIER 112
Query: 169 LRYI 172
L +
Sbjct: 113 LAQL 116
>gi|260173948|ref|ZP_05760360.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D2]
gi|315922216|ref|ZP_07918456.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D2]
gi|313696091|gb|EFS32926.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D2]
Length = 152
Score = 44.9 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
++ YP+ I L C +C C E G L+ + ++ + I+
Sbjct: 2 NLLGTYPETIVDGEGIRYSIYLAGCSHHCLGCHNPESWNPGAGEELTEEKIQSIIREIKA 61
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP + L
Sbjct: 62 NPLLDGVTFSGGDPFFHPEEFL 83
>gi|188586121|ref|YP_001917666.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|229890572|sp|B2A3X6|MIAB_NATTJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|179350808|gb|ACB85078.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 451
Score = 44.9 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFCFRREMV 118
PQ E + +R I ++ + + H+ D + + + + C YC++C +
Sbjct: 119 FPQLLEHVMQKGKRVKEISQDDSQVFENLPHKREDSIKAWVVISYGCDNYCKYCIVPYVR 178
Query: 119 GSQKGTVLSSKDTEA---ALAYIQEKSQI-WEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
G Q+ E A ++E + + V G D + + +L+ L I+
Sbjct: 179 GQQRSRDPEHIKYEVEKLAKEGLKEITLLGQNVNSYGKD--LDQNISFTNLLEELSKIEG 236
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
++ +RF P+ + ELI LKE+ K I H + P +
Sbjct: 237 IERIRF----MTSHPKDFDKELITTLKESNK---ICEHFHLPVQ 273
>gi|150390422|ref|YP_001320471.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus metalliredigens
QYMF]
gi|238065283|sp|A6TRJ4|RIMO_ALKMQ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|149950284|gb|ABR48812.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus metalliredigens
QYMF]
Length = 446
Score = 44.9 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 13/140 (9%)
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
L I +K+ C YC +C ++ G + + ++ +
Sbjct: 132 YDETLPRIQTTASHSAYIKISDGCDNYCTYCIIPKLRGKYRSRKM--ENIIQEAQTLANN 189
Query: 142 SQIWEVIFTGGD----PLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
+ E+I D + L + RL +L L ++ +Q +R P+ I EL
Sbjct: 190 -GVKEIILIAQDTTRYGIDLYDEYRLSALLDKLSEVEGIQWIRI----LYCYPEMITDEL 244
Query: 197 IQCLKEAGKPV-YIAIHANH 215
I +K K YI I H
Sbjct: 245 IATIKNNDKVCKYIDIPIQH 264
>gi|331089440|ref|ZP_08338339.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 3_1_46FAA]
gi|330404808|gb|EGG84346.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 3_1_46FAA]
Length = 440
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 29/186 (15%)
Query: 97 ILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152
LK+ C +C +C R S L + E A ++E + E G
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFRSVPMERLIKEAKELAEQGVKELILVAQETTLYGK 205
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI 211
D + K L ++++ L I ++ +R P+ I ELI+ +K+ K Y+ +
Sbjct: 206 D--LYGEKCLHRLVEELCKIAGIRWIRI----LYCYPEEITDELIEVIKKEPKVCHYLDL 259
Query: 212 HANHP--------------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
H E ++ +L + ++ L+ G + E
Sbjct: 260 PIQHASDSILKRMGRRTSKQELTDIVK----KLRKEIPDICLRTTLITGFPGETEDQHEE 315
Query: 258 MRTFVE 263
+ FV+
Sbjct: 316 LMQFVD 321
>gi|317500459|ref|ZP_07958683.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
8_1_57FAA]
gi|316898214|gb|EFV20261.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
8_1_57FAA]
Length = 440
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 29/186 (15%)
Query: 97 ILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152
LK+ C +C +C R S L + E A ++E + E G
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFRSVPMERLIKEAKELAEQGVKELILVAQETTLYGK 205
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI 211
D + K L ++++ L I ++ +R P+ I ELI+ +K+ K Y+ +
Sbjct: 206 D--LYGEKCLHRLVEELCKIAGIRWIRI----LYCYPEEITDELIEVIKKEPKVCHYLDL 259
Query: 212 HANHP--------------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
H E ++ +L + ++ L+ G + E
Sbjct: 260 PIQHASDSILKRMGRRTSKQELTDIVK----KLRKEIPDICLRTTLITGFPGETEDQHEE 315
Query: 258 MRTFVE 263
+ FV+
Sbjct: 316 LMQFVD 321
>gi|303233275|ref|ZP_07319947.1| ribosomal protein S12 methylthiotransferase RimO [Atopobium vaginae
PB189-T1-4]
gi|302480665|gb|EFL43753.1| ribosomal protein S12 methylthiotransferase RimO [Atopobium vaginae
PB189-T1-4]
Length = 532
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 11/128 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+K+ C C FC + G +D A + + + I E+I G D I
Sbjct: 220 AFVKISEGCSRMCAFCAIPHIRGPYASR--PPQDILAEVDML-VDAGIHEIILIGQDTGI 276
Query: 157 LS-----HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
K L +L+ + + HV+ + RV + P+ + PELI +++ + + YI
Sbjct: 277 WGCDFKEPKTLAWLLQQVAH--HVRGKQCWIRVLYLQPEGMTPELISTIRDTPEVLPYID 334
Query: 211 IHANHPYE 218
I H E
Sbjct: 335 IPIQHCSE 342
>gi|324326187|gb|ADY21447.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 337
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 39/98 (39%), Gaps = 8/98 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G+ + +LS + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFIGM-GVEKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
+ L +++ L ++ ++ + + + Q
Sbjct: 79 LRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQAKT 114
>gi|253570571|ref|ZP_04847979.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 1_1_6]
gi|251839520|gb|EES67603.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 1_1_6]
Length = 164
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
++ YP+ I+ L C +C C E + G +L+ + ++ + I+
Sbjct: 12 HLLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKA 71
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP L
Sbjct: 72 NPLLDGVTFSGGDPFYNPEAFL 93
>gi|146297144|ref|YP_001180915.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|238065313|sp|A4XLD9|RIMO_CALS8 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|145410720|gb|ABP67724.1| SSU ribosomal protein S12P methylthiotransferase
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 440
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 44/231 (19%), Positives = 76/231 (32%), Gaps = 34/231 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL- 155
+K+ C C +C + G+ + D + E E++ T D
Sbjct: 148 AYIKIAEGCNNRCSYCSIPLIRGNYTSRYI--DDIIQEARKLSEDGY-KEIVLTAQDTTK 204
Query: 156 ----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
I K L +L+ L I +++ +RF P+ I+ EL+ +K K V Y
Sbjct: 205 YGIDIYQKKMLATLLQKLSEIDNIKWIRF----LYSYPEDIDDELLNIVKSLPKVVKYFD 260
Query: 211 IHANHP----------YEFSEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANL-- 257
I H SE I R+ +A ++ ++ ++ G + + L
Sbjct: 261 IPIQHINNRILKLMNRKTSSEGIKELIQRIRSAFDEVVIRTTVMVGFPTESEDEFEELYE 320
Query: 258 ---MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS---LKEKIS 302
F L Y + + E K L+ KIS
Sbjct: 321 FVKWAKFDRLGAFMYS--QEEGTPAADLPQTDDETKVKRYERILNLQRKIS 369
>gi|29347409|ref|NP_810912.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides thetaiotaomicron VPI-5482]
gi|29339309|gb|AAO77106.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides thetaiotaomicron VPI-5482]
Length = 164
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
++ YP+ I+ L C +C C E + G +L+ + ++ + I+
Sbjct: 12 HLLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKA 71
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP L
Sbjct: 72 NPLLDGVTFSGGDPFYNPEAFL 93
>gi|270294216|ref|ZP_06200418.1| radical SAM domain-containing protein [Bacteroides sp. D20]
gi|270275683|gb|EFA21543.1| radical SAM domain-containing protein [Bacteroides sp. D20]
Length = 292
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 68/170 (40%), Gaps = 17/170 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
D++ + + + C C FC + V++ + + + Y++ +I E+ F+GG+P
Sbjct: 8 DKLRILVTNGCNYRCPFCHNEGQTSKDRFNVMNLDNFKLLIDYLK-DEEISEITFSGGEP 66
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ + L +++K + + + + S + +V +RI Q L I
Sbjct: 67 FL--NPNLIEMIKYVSERTNWE-VSCASNLSLVTKERI-----QQLANIPLKFNIQFPFI 118
Query: 215 HPYEFSEE--------AIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+F + + I + +G+ + SV+ +D + +
Sbjct: 119 DASKFQKSTGSGNLSRVMENIRLVRESGLEVGLNSVIQSDSKEDVKEMVE 168
>gi|94264027|ref|ZP_01287827.1| Radical SAM [delta proteobacterium MLMS-1]
gi|93455538|gb|EAT05725.1| Radical SAM [delta proteobacterium MLMS-1]
Length = 351
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 66/216 (30%), Gaps = 35/216 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ C + C C + ++ + + L I +Q V+ +GG+
Sbjct: 5 PKWLAWEITRRCNLNCVHCRSSSELEAKGHPDFDFTEAKRILDDITSYAQPV-VVLSGGE 63
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210
PL+ + + + LR + + E+ + LKE G +
Sbjct: 64 PLLRDD------VFDIAAYGTEKGLRMC---LATNGTLVTDEVCRRLKEVGIRMVSMSLD 114
Query: 211 -----IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+H N P F I A I L S K D + L +
Sbjct: 115 GADAAVHDNFRSQPGAFD-GTINATRLFREHDIPFLFNSSFTKRNQADIPRVYRLAKEL- 172
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Y+ + G+ I++ L
Sbjct: 173 --GATAWYMFMI----------VPTGRGEDILSELI 196
>gi|32266379|ref|NP_860411.1| hypothetical protein HH0880 [Helicobacter hepaticus ATCC 51449]
gi|32262429|gb|AAP77477.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 423
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 48/160 (30%), Gaps = 14/160 (8%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRY-PDRILLKLLHVCPVYCRFCFRREMVGSQ 121
+ +E + H + H R LK+ C C +C
Sbjct: 103 RIDEFLTTNQRFFHTESAPEHIDSTIVTHFSGKSRAFLKIQEGCDFACSYCI--IPFVRG 160
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKH 174
K K + + + + EV+ TG D L L +++K + +
Sbjct: 161 KARSYPQKSILEQIRALAQNGK-TEVVLTGTNVGSYGKD---LKDYNLARLIKDIYSLGV 216
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
++ LR S P + L E + + +N
Sbjct: 217 LKRLRVGSLEPSQIDSELKESLELPFMEKHLHIALQHTSN 256
>gi|114567375|ref|YP_754529.1| molybdenum cofactor biosynthesis protein A [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|122317679|sp|Q0AVU6|MOAA_SYNWW RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|114338310|gb|ABI69158.1| GTP cyclohydrolase subunit MoaA [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 326
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 37/180 (20%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + CR+C V + ++LS ++ + I + I ++ TGG+PL+ +
Sbjct: 16 LTDRCNLRCRYCMPETGVDNLTHYSILSLEEMARLVR-IASELGIQKIRLTGGEPLVRRN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY-E 218
+ +++ + I + + + + L + LK N
Sbjct: 75 --VPQLISYIAQIPRIDDIALTTNGTLF------AALAEELKT--------AGLNRINFS 118
Query: 219 FSEEAIAAISRLANAG-----------------IILLSQSVLLKGINDDPEI-LANLMRT 260
+ G + V+++G NDD I L R
Sbjct: 119 LDSLVPEKFKYITRRGDLSKVKEAIFKALELDMHPVKINMVVIRGFNDDEIIDFVELARK 178
>gi|188997227|ref|YP_001931478.1| Radical SAM domain protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932294|gb|ACD66924.1| Radical SAM domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 208
Score = 44.5 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Query: 88 GIVHRYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G VH D L+ L C C C+ +V G + E L I++
Sbjct: 8 GFVHSTKDVPGKWCLILFLAGCNFRCLHCYNWRVVLDIAGNIP----IERVLEEIEKSPF 63
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ ++ +GG+P I + L +++ T++ + +R +
Sbjct: 64 LECIVISGGEPTIHEPEELIELVNTIKKVNPELKIRIDTNGS 105
>gi|302385233|ref|YP_003821055.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
gi|302195861|gb|ADL03432.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
Length = 347
Score = 44.5 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+L C + C+ C+ + + ++S++ + Y+ E I+E I +GG+PL+
Sbjct: 45 FELTSHCNLACKHCYNNSGINNISDA-MTSQNWISFSQYLVEHGGIFECIISGGEPLLFG 103
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ L K++ L + L I + + E+ L++
Sbjct: 104 ND-LFKIMDILHEDGTLFFL-------ITNGYLLTKEIADQLRKYRYH 143
>gi|297627043|ref|YP_003688806.1| Fe-S oxidoreductase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922808|emb|CBL57386.1| Fe-S oxidoreductase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 373
Score = 44.5 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 96/281 (34%), Gaps = 37/281 (13%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
P G + P+ R P I +L C + CR C G + + +
Sbjct: 1 MSHPAGIGSVKPVNWAYDRAPMIIYWELTTACGLACRHCRATAQPDPAPGELTTDEALGV 60
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPIVDPQ 190
+ S VIFTGGDP+ L L + + L + P++ Q
Sbjct: 61 LDEFAGFGSPAPHVIFTGGDPMRRGD------LDQLIAAANQRGLGVSLAPAVTPLLSAQ 114
Query: 191 RINPELIQCLKEAGKPVYIAIHANH--PYEFSEEAIAAISRLAN---AGIILLSQSVLLK 245
R+ ++ + + A+H + A + LA+ AG+ + +++
Sbjct: 115 RLKDLKALDVQAISLSLDGSTAAHHDGIRQVPGTFDATMQALADANAAGVPVQINTLVTD 174
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
D + + L++ + D+ + F +++ G + L+E G
Sbjct: 175 ETAKDLDDVYELLK-------------NYDVMQWSLFFLISVGRG----SQLRELTPGDA 217
Query: 306 QPFYILDLPGGYGKV-KIDTHNIKKVGNGSYCITDHHNIVH 345
+ I +GK+ + IK Y + ++H
Sbjct: 218 ERTLI-----KWGKIGRTSPFRIKTTEAMQYRRINAQAMMH 253
>gi|255691222|ref|ZP_05414897.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides finegoldii DSM 17565]
gi|260623136|gb|EEX46007.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides finegoldii DSM 17565]
Length = 163
Score = 44.5 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
++ YP+ I+ L C +C C E + G L+ + ++ + I+
Sbjct: 12 NLLTAYPETIVDGEGIRYSIYLAGCSHHCPGCHNPESWNPEAGERLTEEKIQSIIKEIKA 71
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP L
Sbjct: 72 NPLLDGVTFSGGDPFYNPEAFL 93
>gi|296132280|ref|YP_003639527.1| molybdenum cofactor biosynthesis protein A [Thermincola sp. JR]
gi|296030858|gb|ADG81626.1| molybdenum cofactor biosynthesis protein A [Thermincola potens JR]
Length = 326
Score = 44.5 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 25/175 (14%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C C +C E V + +LS ++ + K I ++ TGG+PL+
Sbjct: 16 VTDRCNYRCVYCMPAEGVPMHCRDEILSLEEILKVIKS-STKLGIRKIRLTGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYE 218
K + +++ + I + + + ++ P LKEAG K V I++ P
Sbjct: 73 KGIINLVQGIARIPQIDDIALTTNGALL------PAYATALKEAGLKRVNISLDTLKPDR 126
Query: 219 FSEEAIAAISRLAN--AGI---------ILLSQSVLLKGINDDPEI-LANLMRTF 261
F + + RL + AGI + +V+++G NDD + NL +
Sbjct: 127 FRQITR--VGRLQDVWAGIEAAWEEGFEPVKINTVVIRGFNDDEILDFVNLTKKL 179
>gi|110637727|ref|YP_677934.1| GTP cyclohydrolase subunit MoaA [Cytophaga hutchinsonii ATCC 33406]
gi|110280408|gb|ABG58594.1| GTP cyclohydrolase subunit MoaA [Cytophaga hutchinsonii ATCC 33406]
Length = 317
Score = 44.5 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 71/209 (33%), Gaps = 23/209 (11%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L VC + C +C + VL+ ++ + + I + + + TGG+PL+
Sbjct: 22 LTAVCNMACVYCVTPGAIHTPSAEKVLTVEEYLSIIKNIHSQVGLKTIRLTGGEPLLFKE 81
Query: 160 -KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC---LKEAGKPVYIAIHANH 215
L K +K L I +++ ++ V + L L V+ I N
Sbjct: 82 LPVLIKGIKALG-ITDIKLTTNGLKLLSVLDALVEAGLTSINISLDALDPAVFRNITKN- 139
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI--------------LANLMRTF 261
+ + I + GI + +V+L+G+ND I LM+
Sbjct: 140 -QDLR-AVLDGIEAARHKGIAIKINTVVLRGVNDHQIIPLLEYASARNIPIRFLELMKMG 197
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ Y D ++ +
Sbjct: 198 YLHYNESDYFFGMDDIVEKISSVTSVAKM 226
>gi|329122066|ref|ZP_08250674.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister micraerophilus
DSM 19965]
gi|327466873|gb|EGF12389.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister micraerophilus
DSM 19965]
Length = 445
Score = 44.5 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 24/129 (18%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151
R +K+ C YC FC + L S+ E A+ I++ + EV+ TG
Sbjct: 155 RAFVKVQEGCDNYCTFC-----IIPYARGRLKSRKQEDAVDEIKKLVEKGYREVVLTGIH 209
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + + L ++ L I ++ +R S + ELI +K +
Sbjct: 210 LGNYGKD--LRNGTSLSTLVSELLKIPNLLRIRLGSIESVELS----DELINIIKNEKR- 262
Query: 207 VYIAIHANH 215
H H
Sbjct: 263 ---VCHHLH 268
>gi|289423896|ref|ZP_06425689.1| conserved hypothetical protein [Peptostreptococcus anaerobius
653-L]
gi|289155673|gb|EFD04345.1| conserved hypothetical protein [Peptostreptococcus anaerobius
653-L]
Length = 442
Score = 44.5 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 66/194 (34%), Gaps = 35/194 (18%)
Query: 17 ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED 76
+ + E+I EI++++ + ++ R + + EEL+ +
Sbjct: 79 YSQVSPEEILEIEDVNLV------------MGTND-----RRTIVDRIEELDSNSKLSTV 121
Query: 77 PIGDN--NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
++ + R +K+ C YC +C + + S++ +
Sbjct: 122 DDIMKVREFESIEISQNNGKTRAFIKIQDGCDRYCTYC-----IIPYARGRIRSRNIDEI 176
Query: 135 LAYIQ--EKSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
I + EV+ TG D + + V+K + I ++ +R S P
Sbjct: 177 REEIITLANNGYKEVVLTGIHVASYGKD--LKEDIGILDVIKAVNDIDGIERIRLSSVEP 234
Query: 186 IVDPQRINPELIQC 199
++ E+ +
Sbjct: 235 VLFTDEFIDEICKI 248
>gi|256825735|ref|YP_003149695.1| GTP cyclohydrolase subunit MoaA [Kytococcus sedentarius DSM 20547]
gi|256689128|gb|ACV06930.1| GTP cyclohydrolase subunit MoaA [Kytococcus sedentarius DSM 20547]
Length = 333
Score = 44.5 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 87 KGIVHRY---PDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKS 142
G+V R+ + + L+ C + C +C E V K +LS ++ A+A + S
Sbjct: 4 PGLVDRFGRVHTDLRISLIDKCNLRCTYCLPAEGVPWMAKDELLSREEL-RAIAAVAVAS 62
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
I E+ TGG+PL+ L+ ++ L ++
Sbjct: 63 GITEIRLTGGEPLLRPD--LEDLVADLASLE 91
>gi|189348694|ref|YP_001941890.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
gi|189338832|dbj|BAG47900.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
Length = 374
Score = 44.5 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 26/157 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C RE+ GS + + A L I + ++ TGG+PL+
Sbjct: 48 VIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEPLL 107
Query: 157 LSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ L+ +++ L + V L + ++ + L++AG
Sbjct: 108 R--RHLETLIERLAALTTVDGRPVELALTTNGALLAAKART------LRDAGLTRVTV-- 157
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
A R+++A + + S +L GI
Sbjct: 158 -----SLDALDDAVFRRMSDADVPV---SRVLAGIEA 186
>gi|187477325|ref|YP_785349.1| molybdenum cofactor biosynthesis protein A [Bordetella avium 197N]
gi|115421911|emb|CAJ48431.1| molybdenum cofactor biosynthesis protein A [Bordetella avium 197N]
Length = 360
Score = 44.5 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 72/225 (32%), Gaps = 42/225 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R++ + +LS ++ A + ++ TGG+PL
Sbjct: 40 VTDRCNFRCTYCMPRDVFDASYRFMPHSALLSFEEITRAARVF-TRLGTEKIRLTGGEPL 98
Query: 156 ILSH-KRLQKVLKTLRY---IKHVQIL--------RFHSRVPIVDPQRINPELIQCLKEA 203
+ +L +L LR + L R S + R+ L L
Sbjct: 99 LRKDVDKLIAMLADLRTPQGLPLDLTLTTNASLLARKASALKAAGLGRVTVSL-DALDPG 157
Query: 204 GKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + + I A AG+ + V+ +G+NDD + L R
Sbjct: 158 RFKQLADADY------TPSDVLRGIDAAAAAGLPVKVNMVVRRGVNDDQ--ILPLAR--- 206
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-----SLKEKIS 302
++ H + + + G + L ++S
Sbjct: 207 ------HFRHSGHVLRFIEYMDVGNSNGWNLAEVLPSAELIARLS 245
>gi|194366021|ref|YP_002028631.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas
maltophilia R551-3]
gi|226707388|sp|B4SL67|MOAA_STRM5 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|194348825|gb|ACF51948.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas
maltophilia R551-3]
Length = 326
Score = 44.5 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 69/223 (30%), Gaps = 29/223 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G +P L C C +C + L + + + ++
Sbjct: 7 GFGRSFPYLRLSL-TEACNFRCSYCLPDGYQVDGRPRFLQVDEIARLVRAFAA-LGMSKI 64
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR---INPELIQCLKEAG 204
TGG+P + L +++ T+ ++ + + + P+R + + L +
Sbjct: 65 RLTGGEPSLRKD--LDEIIATVAAAPGIRKVAITTNG-TLLPRRLPGWHRAGLTALNVSM 121
Query: 205 KPVYIAIHANHPYEFS-----EEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLM 258
+ + E ++ G+ + +VLL+G+NDD L
Sbjct: 122 DSL----QRERFRTITGHDRLPEIEQGLALAQALGLPAIKLNAVLLRGLNDD-----ELP 172
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
+ LR +P+ R E L+ +
Sbjct: 173 QWMDYLRDRPFS------VRFIELMRTGDNEAYFQRHHLRADV 209
>gi|310780511|ref|YP_003968843.1| ribonucleoside-triphosphate reductase class III activase subunit
[Ilyobacter polytropus DSM 2926]
gi|309749834|gb|ADO84495.1| ribonucleoside-triphosphate reductase class III activase subunit
[Ilyobacter polytropus DSM 2926]
Length = 166
Score = 44.5 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
C YC+ C E G VL + ++ I + V +GGDP +
Sbjct: 19 YSIYFSGCSHYCQGCHNPETWKGDIGEVLDETYMKKIISQISNNPLLDGVTLSGGDPFFI 78
Query: 158 SHKRLQKVLKTLRYIKH 174
+ L L+ L+ H
Sbjct: 79 PEELLG-FLRRLKEETH 94
>gi|163814151|ref|ZP_02205543.1| hypothetical protein COPEUT_00305 [Coprococcus eutactus ATCC 27759]
gi|158450600|gb|EDP27595.1| hypothetical protein COPEUT_00305 [Coprococcus eutactus ATCC 27759]
Length = 437
Score = 44.5 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 61/184 (33%), Gaps = 24/184 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
K+ C C +C + G + A+ + V+
Sbjct: 140 SMAYFKIAEGCNKLCTYCIIPHIRGRY--RSIPMDRLLASAEKLAADGIKELVLVAQETT 197
Query: 155 LILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYI 209
L K+L ++L L I+ ++ +R P+ I ELI + E K YI
Sbjct: 198 LYGVDLYGGKKLPELLTKLSDIEGIEWIRL----LYCYPEEITDELISVMAENPKICHYI 253
Query: 210 AIHANHP-YEF---------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
I H E E+ ++ +S+L A + ++ L+ G P L
Sbjct: 254 DIPIQHSENEILRRMGRKTSREDIVSLVSKLRTAMPDIAIRTTLISGF---PGETQELHD 310
Query: 260 TFVE 263
V+
Sbjct: 311 GLVD 314
>gi|150015722|ref|YP_001307976.1| MiaB-like tRNA modifying enzyme [Clostridium beijerinckii NCIMB
8052]
gi|149902187|gb|ABR33020.1| MiaB-like tRNA modifying enzyme [Clostridium beijerinckii NCIMB
8052]
Length = 432
Score = 44.5 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 69/218 (31%), Gaps = 40/218 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C +C +C SKD + L I+ + E+I +G
Sbjct: 139 KTRAFLKIQDGCNRFCAYCL-----IPYTRGTTCSKDPQKVLDEIKNLSEHGFKEIILSG 193
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D + + L +L+ + + ++ +R S P E+I+ +K+
Sbjct: 194 IHTASYGVD--LDGNVTLITLLEEIEKLDGIERVRIGSIEPSF----FTDEVIEKMKKMK 247
Query: 205 K-----PVYIAIHAN----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKGI-N 248
K + + + E+ + L +A I + ++ G
Sbjct: 248 KLCPQFHLSLQSGCDATLKRMNRRYTAKEYEDAVNRIRENLKDASIT----TDVIVGFPG 303
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ E +++ ++ GT +
Sbjct: 304 ETDEEFNETYEYLKRIKLTKTHIFKFSPRKGTKASDMP 341
>gi|328952133|ref|YP_004369467.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328452457|gb|AEB08286.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 363
Score = 44.5 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 66/195 (33%), Gaps = 28/195 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157
+ C + C C +G +G L++ + +A L + + +I TGG+PL+
Sbjct: 24 WETTRRCNLACAHCRAAAGMGPYEGE-LTTAEGKALLDDVAGMGPAV--IILTGGEPLLR 80
Query: 158 SH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANH 215
L L H V V+ + PE+ + LKEA + I++
Sbjct: 81 KDIFELAAYGAGLG----------HRMVMAVNGTLLTPEIARRLKEANIQRLSISLDGAS 130
Query: 216 PYEFS---------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ A+ I L AG+ + ++ ++ + +L +
Sbjct: 131 AASHDRLRQVPGAFDAALHGIKVLQEAGLPFQINTTVIVANRNELPAIYDLAQKL---GA 187
Query: 267 KPYYLHHPDLAAGTS 281
+++
Sbjct: 188 AAHHVFVLVPTGRGE 202
>gi|168700072|ref|ZP_02732349.1| molybdenum cofactor biosynthesis protein A [Gemmata obscuriglobus
UQM 2246]
Length = 337
Score = 44.5 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C + + +L+ ++ A + + + +V TGG+PL+ K
Sbjct: 28 VTDRCNLRCTYCMPENVTFQDRSELLTFEEIVAFVR-VAVPLGVNKVRLTGGEPLMR--K 84
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVP 185
L K+++ L + + + +
Sbjct: 85 ELHKLVRLLTAVPGLTDIGLTTNGI 109
>gi|15898449|ref|NP_343054.1| coenzyme PQQ synthesis protein E (pqqE-2) [Sulfolobus solfataricus
P2]
gi|227829520|ref|YP_002831299.1| radical SAM protein [Sulfolobus islandicus L.S.2.15]
gi|229578824|ref|YP_002837222.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14]
gi|229582436|ref|YP_002840835.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51]
gi|284997434|ref|YP_003419201.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5]
gi|13814874|gb|AAK41844.1| Coenzyme PQQ synthesis protein E (pqqE-2) [Sulfolobus solfataricus
P2]
gi|227455967|gb|ACP34654.1| Radical SAM domain protein [Sulfolobus islandicus L.S.2.15]
gi|228009538|gb|ACP45300.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14]
gi|228013152|gb|ACP48913.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51]
gi|284445329|gb|ADB86831.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5]
Length = 350
Score = 44.5 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 72/197 (36%), Gaps = 27/197 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ CP+ C+ C R + L+++++ L I ++ ++FTGGD
Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKVV-IVFTGGD 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL S L + K+L + R++ E ++ + + Y++I
Sbjct: 65 PLSRSDIFELMEYAKSLG---------LVVSIAPSPSHRLDDETMKIISNYAR--YMSIS 113
Query: 213 ANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + + A+ I GI + +++ K + + L
Sbjct: 114 LDGATSQTHDWLRGLGSYKYALRGIELGLKYGIQVQVNTLVWKKSYSELPFVVKL---LK 170
Query: 263 ELRIKPYYLHHPDLAAG 279
E+ +K + +
Sbjct: 171 EMGVKIWEVFFLIPVGR 187
>gi|313891670|ref|ZP_07825277.1| tRNA methylthiotransferase YqeV [Dialister microaerophilus UPII
345-E]
gi|313119948|gb|EFR43133.1| tRNA methylthiotransferase YqeV [Dialister microaerophilus UPII
345-E]
Length = 445
Score = 44.5 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 24/129 (18%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151
R +K+ C YC FC + L S+ E A+ I++ + EV+ TG
Sbjct: 155 RAFVKVQEGCDNYCTFC-----IIPYARGRLKSRKQEDAVDEIKKLVEKGYREVVLTGIH 209
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + + L ++ L I ++ +R S + ELI +K +
Sbjct: 210 LGNYGKD--LRNGTSLSTLVSELLKIPNLLRIRLGSIESVELS----DELINIIKNEKR- 262
Query: 207 VYIAIHANH 215
H H
Sbjct: 263 ---VCHHLH 268
>gi|331086370|ref|ZP_08335450.1| molybdenum cofactor biosynthesis protein A [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|330406136|gb|EGG85659.1| molybdenum cofactor biosynthesis protein A [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 332
Score = 44.5 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 59/171 (34%), Gaps = 20/171 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C + +L+ ++ I + I + TGG+PL+
Sbjct: 16 ITDRCNLRCRYCMPDGIKSIPMEKILTLEEIAEVCQ-IASELGITKFKVTGGEPLVRK-G 73
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKE-AGKPVYIAIHA 213
++ ++ L+ + H + + + ++ + + L +
Sbjct: 74 CIE-LIHMLKALPHTEQVTLTTNGILLAVYAKELKEAGIDGVNVSLDTLCAEKFAEITGY 132
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ + + I G+ + +VL KG+N+ +++
Sbjct: 133 DRLK----DVLEGIRTAHALGLKVKINTVLQKGVNEGE------WEALLQI 173
>gi|282890695|ref|ZP_06299215.1| hypothetical protein pah_c026o007 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499288|gb|EFB41587.1| hypothetical protein pah_c026o007 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 430
Score = 44.5 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 20/134 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C +C +C + G + + + + I E++ TG
Sbjct: 133 HTRAFVKVQDGCNEFCTYCIIPYVRGRSRSRTI-PEIIDEVKDLISN--GFKEIVLTGIN 189
Query: 152 -----GDPLI-LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL----- 200
G+P+ + RL +++ + + ++ LR S +DP I+ EL +
Sbjct: 190 IGDFDGNPVEGMPPHRLVDLVRAVDQVPGLKRLRISS----IDPDEIDDELADAVLNGAK 245
Query: 201 KEAGKPVYIAIHAN 214
+ + +N
Sbjct: 246 TCHSMHIVLQSGSN 259
>gi|190570899|ref|YP_001975257.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019415|ref|ZP_03335221.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357171|emb|CAQ54586.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994837|gb|EEB55479.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 408
Score = 44.5 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 36/227 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +++ + C C FC E G+ +V + E +I+ EV+FTG D
Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGN-NRSVPVNNIIEQIKIFIEN--GYQEVVFTGVD 179
Query: 154 PLILSHKR-----LQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE----- 202
L +++ L+ I ++ LR S +D ++ EL+ +
Sbjct: 180 ITDFGTDLFGKQSLGSMVRRVLKDIPQLKRLRLSS----IDVAEVDDELMDLIANESRLM 235
Query: 203 AGKPVYIAIHAN---------HPYEFSEEAIAAISRLANAGIILLSQSVLLKGI-NDDPE 252
+ + N H E E + L + + ++ G + E
Sbjct: 236 PHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLRPN---IAFGADIIAGFPTETDE 292
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
+ + + ++ + + + +I ++++
Sbjct: 293 MFQDTVDLLKKINVVYLHAF-----PYSERKNTPAARMPQISENVRK 334
>gi|24211989|sp|Q8Y0K4|MOAA_RALSO RecName: Full=Molybdenum cofactor biosynthesis protein A
Length = 345
Score = 44.5 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ E + E + ++ TGG+PL
Sbjct: 22 VTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGEPL 80
Query: 156 ILSH-KRLQKVLKTL 169
+ +RL ++L L
Sbjct: 81 LRKDIERLVEMLARL 95
>gi|299136219|ref|ZP_07029403.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
gi|298602343|gb|EFI58497.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
Length = 370
Score = 44.5 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 21/127 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGT-------VLSSKDTEAALAYI----QEKSQ 143
D +L+K+ C + C +C+ V +Q T +S + E + + +++
Sbjct: 4 DTVLIKVASRCNINCSYCY----VYNQGDTSWQRMPKHMSFEIVEDVIRQLATLYRDQDH 59
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ V+ GG+PL+L L+ +LK L + SR + I+ +L++
Sbjct: 60 PFAVVLHGGEPLLLPRNILEALLKGLADCLP-----ATCSRSIQTNGTLIDDDLLELCVR 114
Query: 203 AGKPVYI 209
G + +
Sbjct: 115 TGTTLSV 121
>gi|256751164|ref|ZP_05492045.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749889|gb|EEU62912.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 435
Score = 44.5 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155
I L + C + C +CF + T ++ E + ++ + + F GG+PL
Sbjct: 53 ITLYITDKCNLACTYCFNKTNNEKVTYTFFPERNIEKIIEFLKRTDIHFVTIRFFGGEPL 112
Query: 156 ILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRI-NPELIQCLKEAGKPVYI 209
L + ++K+LK + IK+ + L + + + I N ++++ L+ ++I
Sbjct: 113 -LEIEYIEKILKYIEMKIKN-KELAINVQYNVFTNGTILNDKILEILRRYNIFIFI 166
>gi|326204018|ref|ZP_08193879.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
gi|325985785|gb|EGD46620.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
Length = 471
Score = 44.5 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 97 ILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAAL-----AYIQEKSQIWEVIFT 150
+ +H C + C++CF S + + L Y ++ + +
Sbjct: 84 VSFPPVHRCNLNCQYCFAGGGNNYSGDRPEFDRERIDRLLHFVYEDYFKDYKKFRFDFVS 143
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
GG+PL L+ + ++ +++ +R I + + S + + I E+I L
Sbjct: 144 GGEPL-LNFEAIRYLVERVREIDGRKQSK-SSFFLVTNGTLITDEIIDYLDR 193
>gi|227488321|ref|ZP_03918637.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227091731|gb|EEI27043.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
51867]
Length = 413
Score = 44.5 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 68/205 (33%), Gaps = 31/205 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGG 152
P ++ ++ C + C+ C R + L++++ + L + + + V+FTGG
Sbjct: 18 PFIVIWEVTRACALVCKHC-RADAQHEPHPDQLTTEEGKRLLDQLASYEKPYPLVVFTGG 76
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DP S L L L + ++ PE + L+EAG
Sbjct: 77 DPFERSD------LAELCQYGTDLGLSISLSPSVT--PKVTPERLHELREAGGKAMSM-- 126
Query: 213 ANHPYEFSEEAIAAISRLANA--------------GIILLSQSVLLKGINDDPEILANLM 258
+ E A + G L S L KG + L+
Sbjct: 127 --SLDGATPETHDAFRGFSGTFDATLEKAPLINAEGYRLQINSTLTKG---NIHEAPALL 181
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHF 283
+ +E++ K +Y+ +
Sbjct: 182 KRVIEMQAKMWYVFFLVPTGRGADL 206
>gi|160883454|ref|ZP_02064457.1| hypothetical protein BACOVA_01423 [Bacteroides ovatus ATCC 8483]
gi|237720232|ref|ZP_04550713.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 2_2_4]
gi|293371156|ref|ZP_06617693.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides ovatus SD CMC 3f]
gi|156111174|gb|EDO12919.1| hypothetical protein BACOVA_01423 [Bacteroides ovatus ATCC 8483]
gi|229450784|gb|EEO56575.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 2_2_4]
gi|292633814|gb|EFF52366.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides ovatus SD CMC 3f]
Length = 152
Score = 44.5 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
++ YP+ I+ L C +C C E + G L+ + ++ + I+
Sbjct: 2 NLLGTYPETIVDGEGIRYSIYLAGCSHHCPGCHNPESWNPRAGEELTEEKIQSIIREIKA 61
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP + L
Sbjct: 62 NPLLDGVTFSGGDPFFHPEEFL 83
>gi|150016880|ref|YP_001309134.1| radical SAM domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149903345|gb|ABR34178.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 329
Score = 44.5 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 69/209 (33%), Gaps = 25/209 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
I + C + C C+R G + L++++ + + I + + +IF+GG+
Sbjct: 2 QMIISWNTTNKCNLKCSHCYRDS--GKESQGELNTEEAKLLIDQIAK-ANFKIMIFSGGE 58
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ + +++ + ++ + + G +
Sbjct: 59 PLMRED--IFELINYASKAG--LRPVLGTNGTLISREMAEKLKAAGISAIGISLDSLDSK 114
Query: 214 NHPY-----EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
H E + I A+ + GI + ++ N D I +L V +
Sbjct: 115 KHNKFRGNDEAFRDTIYAMKNCRDLGIRFQIHTTVMD-WNKDEII--SLTDFSVAMGAAA 171
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+++ F + G+ I L
Sbjct: 172 HHIF----------FLVPTGRGKDIEDEL 190
>gi|300704632|ref|YP_003746235.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
CFBP2957]
gi|299072296|emb|CBJ43629.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
CFBP2957]
Length = 373
Score = 44.5 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ E + E + ++ TGG+PL
Sbjct: 50 VTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGEPL 108
Query: 156 ILSH-KRLQKVLKTL 169
+ +RL ++L L
Sbjct: 109 LRKDIERLVEMLARL 123
>gi|154496671|ref|ZP_02035367.1| hypothetical protein BACCAP_00963 [Bacteroides capillosus ATCC
29799]
gi|150273923|gb|EDN01023.1| hypothetical protein BACCAP_00963 [Bacteroides capillosus ATCC
29799]
Length = 386
Score = 44.5 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 55/170 (32%), Gaps = 39/170 (22%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-------------AALAYIQEKSQI 144
++ C + C++CF E S + + + + Y +++
Sbjct: 21 IIACTKECNMRCKYCFEEENFKSDYSVPSAKINADFQLGIPYFERFGRELIEYNRKRGFR 80
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
E F GG+P+++ + + ++ + + + + I E++ L++
Sbjct: 81 TEFTFHGGEPMLIKPELIAQLCEYYISLDPAVLFNVQTNGTIC-----TEEMLGLLRKYR 135
Query: 205 KPVYI----------------AIHANHPYEFSEEAIAAISRLANAGIILL 238
V + H H + I ++ AGI L
Sbjct: 136 FRVGVSIDGTEALHDENRVFPNGHGTH-----SVVMQNIRKMQKAGIQLG 180
>gi|83589922|ref|YP_429931.1| hypothetical protein Moth_1074 [Moorella thermoacetica ATCC 39073]
gi|123752930|sp|Q2RJK1|RIMO_MOOTA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|83572836|gb|ABC19388.1| SSU ribosomal protein S12P methylthiotransferase [Moorella
thermoacetica ATCC 39073]
Length = 432
Score = 44.5 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 11/147 (7%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEA 133
P + L ++ LK+ C C +C + G + L +
Sbjct: 123 PGPEMITGELPRLIEDGKPFAYLKIAEGCNNRCTYCTIPSIKGPYRSRPLEKVVAEAVSL 182
Query: 134 ALAYIQEKSQI-WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
A I+E + + G D RL ++L+ L I+ ++ +R P RI
Sbjct: 183 AARGIKELVLVAQDTTAYGLDCY--GEYRLPELLRRLARIEGIEWVRL----LYAYPTRI 236
Query: 193 NPELIQCLKEAGKPV-YIAIHANHPYE 218
PELI+ + V Y+ + H E
Sbjct: 237 TPELIEVMATEPGVVPYLDLPLQHASE 263
>gi|50085046|ref|YP_046556.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ADP1]
gi|49531022|emb|CAG68734.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ADP1]
Length = 335
Score = 44.5 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 60/176 (34%), Gaps = 13/176 (7%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RY ++ + + C C +C +K +L + ++ + I ++ TG
Sbjct: 12 RYKRKLRISVTDRCNFKCMYCMPEHPEWIKKKDLLDFEALYLFCEFMVQN-GIQKIRITG 70
Query: 152 GDPLIL-SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELIQCLKEAG 204
G+PL+ + L+ LR I ++ + + + + +L L
Sbjct: 71 GEPLMRQGVVHFVRDLQKLRSIG-LKRISMTTNAHYLAKYAYDLKQAGLDDLNISLDSLD 129
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
++ + + I G+ +VL+KG NDD +
Sbjct: 130 AQQFLKLT---KKSIEP-VLQGIQAAQLVGLPFKINTVLMKGKNDDQILPLVNWAK 181
>gi|83748466|ref|ZP_00945488.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
UW551]
gi|83724877|gb|EAP72033.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
UW551]
Length = 373
Score = 44.1 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ E + E + ++ TGG+PL
Sbjct: 50 VTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGEPL 108
Query: 156 ILSH-KRLQKVLKTL 169
+ +RL ++L L
Sbjct: 109 LRKDIERLVEMLARL 123
>gi|283780939|ref|YP_003371694.1| MiaB-like tRNA modifying enzyme YliG [Pirellula staleyi DSM 6068]
gi|283439392|gb|ADB17834.1| MiaB-like tRNA modifying enzyme YliG [Pirellula staleyi DSM 6068]
Length = 465
Score = 44.1 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 29/197 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL- 155
LK+ C C FC +M G ++ + + E++ D
Sbjct: 164 AYLKISEGCDRLCTFCAIPKMRGK--HATKPMEEVLKEARQLAAD-GVKELVIVAQDTTY 220
Query: 156 ----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
+ RL ++L+ + ++ +Q +R P I ELI + ++ K V YI
Sbjct: 221 YGIDLYGEPRLAELLREIEKVEGIQWIRL----MYFYPMYITDELIDVIAKSEKIVPYID 276
Query: 211 IHANHPYE---------FS-EEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLM- 258
+ H + + E I +L A L ++ + G + E L
Sbjct: 277 MPLQHINDTMLRRMSRRVTRAETELQIKKLREAIPNLTLRTTFITGFPGETQEQYEELRE 336
Query: 259 ----RTFVELRIKPYYL 271
+ F + + Y
Sbjct: 337 FLREQKFERMGVFTYSF 353
>gi|225025138|ref|ZP_03714330.1| hypothetical protein EIKCOROL_02030 [Eikenella corrodens ATCC
23834]
gi|224942099|gb|EEG23308.1| hypothetical protein EIKCOROL_02030 [Eikenella corrodens ATCC
23834]
Length = 328
Score = 44.1 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 33/256 (12%), Positives = 76/256 (29%), Gaps = 31/256 (12%)
Query: 84 SPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+P + Y R+ + +C C +C G K L+ + E +
Sbjct: 2 TPPHTLTDPYNRRLSYLRLSVTDLCNYRCTYCLPDGYQGKGKPDELTLPEIETLVNVFAA 61
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV------PIVDPQRINP 194
+ ++ TGG+P + L ++ + ++ + +
Sbjct: 62 -AGTRKIRLTGGEPTLRRD--LADIIAMCKANPLIENVALTTNAFRLAQLFPAYRAAGLD 118
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
++ + V+ I E + A + LA + ++LL+ +
Sbjct: 119 KINISIDSFDPDVFFEITGK--RECTNILRALDNILAEGFCNVKVNTLLLRRYAE----- 171
Query: 255 ANLMRTFVELR---IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK----IS----- 302
L +R + ++ S F +I L+ + +
Sbjct: 172 RTLADALDFVRERPVTLRFIELMQTGDNGSFFNSQHLSAAEIERGLQAQGWQLLPRQPHA 231
Query: 303 GLCQPFYILDLPGGYG 318
G + ++ D G G
Sbjct: 232 GPAREYFHRDFSGSIG 247
>gi|90407705|ref|ZP_01215884.1| molybdenum cofactor biosynthesis protein A [Psychromonas sp. CNPT3]
gi|90311174|gb|EAS39280.1| molybdenum cofactor biosynthesis protein A [Psychromonas sp. CNPT3]
Length = 327
Score = 44.1 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 7/180 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C S + + LS ++ + E +V TGG+P +
Sbjct: 20 ITDECNFKCNYCLPDGYQRSHQKSFLSHQEINNLVIAFAE-LGTKKVRITGGEPSLRKD- 77
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAGKPVYIAI-HANHPY 217
+++ ++ + ++ + + ++ Q + + + + H
Sbjct: 78 -FTQIIASVASVDGIEKVATTTNGFQLEKQAKDWFDAGLSAINISVDSLDANTFHLITGK 136
Query: 218 EFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
++ + + AG + SVL+KG+ND+ L +++++ L D
Sbjct: 137 NIFQKVMRGVQASLKAGYAQVKVNSVLMKGVNDNDLALFLNWIKTEKIQLRFIELMQTDD 196
>gi|229105357|ref|ZP_04236004.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-28]
gi|228678069|gb|EEL32299.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-28]
Length = 339
Score = 44.1 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 10/96 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFTGGDP 154
++ C C +C E+ G + I+ + ++ TGG+P
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPD--YAFLKDEFLLTFDEIERLAKVFVSIGVRKIRLTGGEP 79
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
L+ L K++ L I + + + + Q
Sbjct: 80 LLRKD--LTKLIARLVKIDGLVDIGLTTNAIHLTKQ 113
>gi|188585754|ref|YP_001917299.1| Radical SAM domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350441|gb|ACB84711.1| Radical SAM domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 327
Score = 44.1 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 67/201 (33%), Gaps = 29/201 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ C + C+ C+R G L++++ + L I+ + +IF+GG+PL
Sbjct: 3 VSWNTTKSCHLNCKHCYRDA--GEADSRELTTEEGKKLLDEIK-TAGFKLIIFSGGEPLE 59
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHAN 214
+L K + + I ++ + LKEAG + I++ +
Sbjct: 60 RQDIYKLVSYAKKIG-----LRPVLGTSGTT-----ITRKVARKLKEAGAVRLGISLDSV 109
Query: 215 HPYEFSEEAIAA----------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
HP E ++ I G+ + + + + L VEL
Sbjct: 110 HP-EVHDDFRQTPGSFDDALTGIKNCLAEGLDFQIHTTI---VEQNYHEFEELTEFAVEL 165
Query: 265 RIKPYYLHHPDLAAGTSHFRL 285
K +++
Sbjct: 166 GAKAHHIFFLVPTGRAKDIET 186
>gi|160915923|ref|ZP_02078131.1| hypothetical protein EUBDOL_01946 [Eubacterium dolichum DSM 3991]
gi|158432399|gb|EDP10688.1| hypothetical protein EUBDOL_01946 [Eubacterium dolichum DSM 3991]
Length = 249
Score = 44.1 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 8/171 (4%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + L+ C + C++C + Q+ + S + + AL Y Q + +GG+
Sbjct: 19 PGVRFVIFLNGCQMRCKYCHNVDTWQMQEANMTSDELLKKALRYRSYWKQGGGITVSGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ L+ L K V + S P Q +L + L + H
Sbjct: 79 PLLQIDFVLE--LFEKAKAKGVHTVLDTSGNPFTIEQPFFDKLQKLLAVTDLILLDIKHI 136
Query: 214 N--HPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+ E + +A L+ + + VL+ GINDD L L
Sbjct: 137 DALAHKELTGQDNANILAFARYLSEIQKPVWIRHVLVPGINDDEAQLKRLS 187
>gi|329119798|ref|ZP_08248472.1| molybdenum cofactor biosynthesis protein A [Neisseria bacilliformis
ATCC BAA-1200]
gi|327463954|gb|EGF10265.1| molybdenum cofactor biosynthesis protein A [Neisseria bacilliformis
ATCC BAA-1200]
Length = 364
Score = 44.1 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 42/138 (30%), Gaps = 14/138 (10%)
Query: 58 RQFIPQKE-ELNILPEEREDPIGDNNHSPLKG-------IVHRYPDRILLK---LLHVCP 106
R +P + + H+P + Y R+ + +C
Sbjct: 4 RHTLPSSATRFSDGLKGSLKNSKQPPHTPKPRTMTDTRPLTDPYQRRLSYLRLSVTDLCN 63
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
C +C G K L+ + + + S ++ TGG+P + L ++
Sbjct: 64 YRCTYCLPDGYQGKAKPDELTLPEIQTLVTAFAA-SGTRKIRVTGGEPTLRRD--LADII 120
Query: 167 KTLRYIKHVQILRFHSRV 184
+ ++ + +
Sbjct: 121 AACKAAPQIENVALTTNA 138
>gi|225017551|ref|ZP_03706743.1| hypothetical protein CLOSTMETH_01478 [Clostridium methylpentosum
DSM 5476]
gi|224949701|gb|EEG30910.1| hypothetical protein CLOSTMETH_01478 [Clostridium methylpentosum
DSM 5476]
Length = 441
Score = 44.1 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 64/196 (32%), Gaps = 29/196 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL- 155
LK+ C C +C + G + L +D ++ S + E+I D
Sbjct: 147 AYLKIAEGCDNNCTYCAIPAIRGPYRSRKL--EDIVEEAEWLAS-SGVKELIVVAQDTTR 203
Query: 156 ----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI-- 209
+ +L ++L+ L I +R P+ + EL+ L E K
Sbjct: 204 YGSDLYGELKLPELLRRLCQIDGFVWIRV----LYCYPEMVTDELLDVLAEEPKMAKYID 259
Query: 210 --AIHAN-------HPYEFSEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMR 259
H N H EE ++ + R+ + ++ L+ G + E L+
Sbjct: 260 IPIQHINSAVLRRMHRRSTREEILSVVQRVRERVPNITLRTTLIAGFPGETKEQFEELVE 319
Query: 260 -----TFVELRIKPYY 270
F L Y
Sbjct: 320 FVKESKFDRLGCFAYS 335
>gi|312885416|ref|ZP_07745057.1| Radical SAM domain protein [Mucilaginibacter paludis DSM 18603]
gi|311302114|gb|EFQ79142.1| Radical SAM domain protein [Mucilaginibacter paludis DSM 18603]
Length = 317
Score = 44.1 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 61/156 (39%), Gaps = 14/156 (8%)
Query: 103 HVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
C + C +C + + + +A + + + + TGG+PL+ ++
Sbjct: 21 STCNLGCIYCTMGSEDEIAYDHRPQTPAARFIELIAAVHAHTGLKTIRLTGGEPLL--YR 78
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC-LKEAGKPVYIAIHANHPYEF 219
L+ V+ ++ + + +R S +R +L Q L+ + AN +
Sbjct: 79 ELEAVISGIKALG-ITDIRMTSN--AFLLERSAEKLQQAGLRSVNVSLDAM-DANTFFAM 134
Query: 220 S-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + I +AG+ + SV+++G N D
Sbjct: 135 TRRKQLPRTLQGIEAAIDAGLEVKINSVIMRGKNHD 170
>gi|207743614|ref|YP_002260006.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
IPO1609]
gi|206595013|emb|CAQ61940.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
IPO1609]
Length = 391
Score = 44.1 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ E + E + ++ TGG+PL
Sbjct: 68 VTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGEPL 126
Query: 156 ILSH-KRLQKVLKTL 169
+ +RL ++L L
Sbjct: 127 LRKDIERLVEMLARL 141
>gi|116749338|ref|YP_846025.1| molybdenum cofactor biosynthesis protein A [Syntrophobacter
fumaroxidans MPOB]
gi|116698402|gb|ABK17590.1| GTP cyclohydrolase subunit MoaA [Syntrophobacter fumaroxidans MPOB]
Length = 329
Score = 44.1 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 29/201 (14%)
Query: 93 YPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y RI + C + C +C V G +L ++ I I ++
Sbjct: 9 YQRRIDYLRLSITDRCNLRCTYCMPEGGVPKLAHGDILRYEEILRLAR-IVTAMGISKIR 67
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGG+PL+ + ++ I ++ L + V R+ L + K +
Sbjct: 68 ITGGEPLVRRDVLF--LCGSIAGIPQLRSLSITTNG--VLLGRLAGGL---FQAGIKRIN 120
Query: 209 IAIHANHP--------YEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMR 259
+++ P + EE I AG + +V+++G+NDD +A+L
Sbjct: 121 VSLDTLKPGRFASITRQDCFEEVWKGIMAAHEAGFAPIKLNAVVMRGVNDD--EIADL-- 176
Query: 260 TFVELRIKPYYLHHPDLAAGT 280
R+ Y H
Sbjct: 177 ----ARLTFEYPFHMRFIEFM 193
>gi|167041236|gb|ABZ05993.1| putative Radical SAM superfamily protein [uncultured marine
microorganism HF4000_001N02]
Length = 363
Score = 44.1 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 29/214 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE G + + E + + + +V TGG+PL
Sbjct: 45 VTDRCNFRCPYCMPRERFGEDHTFLPRRAFLTFDEIEKVVRAC-MELGLEKVRITGGEPL 103
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L ++ L + L + ++ R+ L L +
Sbjct: 104 LRP--GLDDLMGRLSNLG--LDLALTTNGSLLRRNAQALATAGLTRVTVSL-DALDDDVH 158
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ ++ P + + I AG+ + V+ +GIN+D A L+R F
Sbjct: 159 RL--MTDSDVPV---ADILDGIDAALEAGLEPVKVNCVIRRGINEDQ--AAKLVRHFQGS 211
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+ ++ + D+ R + +++ L+
Sbjct: 212 GVVIRFIEYMDVGRTNGWIRGEVIPSADLLSHLR 245
>gi|255322313|ref|ZP_05363459.1| conserved hypothetical protein [Campylobacter showae RM3277]
gi|255300686|gb|EET79957.1| conserved hypothetical protein [Campylobacter showae RM3277]
Length = 429
Score = 44.1 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 16/164 (9%)
Query: 63 QKEELNILPEEREDPIGDNNH--SPLKGIVHRYPD--RILLKLLHVCPVYCRFCF----R 114
K+E + +DP + + S K IV Y + + +K+ C C +C R
Sbjct: 109 SKKEDINALLKSQDPFFELGNLKSIDKNIVTNYENHTKAFIKIQEGCDFACSYCIIPAVR 168
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ + +L A Y + + G D L ++L L I
Sbjct: 169 GKARSMDEEAILREAKILAYNGYNELVLTGTNIGSYGKDTG----SSLGRLLGRLGKIGG 224
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
++ +R S ++P +I+ + L+E+ ++ I H E
Sbjct: 225 IKRIRLGS----IEPSQIDESFREILRESWLERHLHIALQHTSE 264
>gi|169335672|ref|ZP_02862865.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM
17244]
gi|169258410|gb|EDS72376.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM
17244]
Length = 454
Score = 44.1 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 63 QKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLK-----LLHVCPVYCRFCFRRE 116
+EE+ + E ++ +N ++P K + + ++ ++K + H C + CR+CF
Sbjct: 53 DEEEIKEVIGELKELEAENRLYTPEKKVNRKLYEKGIVKAMCLHVSHDCNLACRYCFASG 112
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI- 172
+ K V++ + + A+ +I S EV F GG+PL L+ ++K ++ +
Sbjct: 113 GNFNMKKEVMNIETAKKAIDFIISNSGNKVHLEVDFFGGEPL-LNFDVVKKTVEYAKEEA 171
Query: 173 -KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
KH +I RF V +N E+I L + V +
Sbjct: 172 KKHNKIFRFTLTTNCVL---LNDEIIDYLNKEMYNVVL 206
>gi|220904538|ref|YP_002479850.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219868837|gb|ACL49172.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 344
Score = 44.1 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 63/196 (32%), Gaps = 34/196 (17%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSS 128
ER D G V RY + L + C + C +C VL
Sbjct: 3 TACERADFSAPAPLVDGHGRVVRY---LRLSVTDRCNLRCMYCCSNARQTCIPHTQVLRY 59
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPL----------IL----SHKRLQKVLKTLRYIKH 174
++ + I + + +V TGG+P +L L+ H
Sbjct: 60 EEMARMVG-IMARLGVTKVRLTGGEPFARKGCDGFLYMLHSRFPDMDLRLTTNGTLLEPH 118
Query: 175 VQILR-FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
+ +LR + + + E + ++A+ RL +A
Sbjct: 119 IPLLRQVGVKAVNLSLDSFDRETFAKVTGRDMQ--------------PAVLSALDRLLSA 164
Query: 234 GIILLSQSVLLKGIND 249
GI + +V ++G+ND
Sbjct: 165 GIRVKVNAVAMRGVND 180
>gi|134300331|ref|YP_001113827.1| RNA modification protein [Desulfotomaculum reducens MI-1]
gi|134053031|gb|ABO51002.1| RNA modification enzyme, MiaB family [Desulfotomaculum reducens
MI-1]
Length = 436
Score = 44.1 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 13/117 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C G + L +A IQ+ E++ TG
Sbjct: 143 KTRAFLKIQEGCNSFCAYCIIPYARGP-VRSRLPENVLSSAEELIQQ--GFQEIVLTGIH 199
Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G L +++ L + + LR S V+P IN LI+ + E
Sbjct: 200 IGAYGQDFTGKDIDLGWLVERLAKLPGLTRLRLGS----VEPHDINNALIKAVSEHP 252
>gi|320450824|ref|YP_004202920.1| coenzyme PQQ synthesis protein PqqE [Thermus scotoductus SA-01]
gi|320150993|gb|ADW22371.1| coenzyme PQQ synthesis protein PqqE [Thermus scotoductus SA-01]
Length = 375
Score = 44.1 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 74/222 (33%), Gaps = 39/222 (17%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD---TEAALAYIQEKSQIWEVI 148
+YP + ++ + C + CR C M G + + + E Y + K + +
Sbjct: 8 QYPYLVAWEVTNACLLACRHCRASAMPHPLPGELSTEEGLGLIEEVATY-RPKPLL---L 63
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPV 207
TGGDPL L +++ R + + + E + LKEAG +
Sbjct: 64 LTGGDPLARPD--LLFLIQRARELG------LKVGLTPAATPLLTREKVFQLKEAGVTRL 115
Query: 208 YIAIHANHPYEFSE------EAIAAISRL---ANAGIILLSQSVLLKGINDDPEILANLM 258
+++ P ++ L AG+ + + + ++ + L
Sbjct: 116 ALSLDGASPKSHDAFRGEEGTFARTLAALGWAKEAGLPTQVNTTVTR---ENWPEIQALP 172
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
E + + L F + + G ++ L +
Sbjct: 173 DLLAEKGVVLWSLF----------FLVPVGRG-ALLKQLSAR 203
>gi|229029864|ref|ZP_04185934.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
gi|228731479|gb|EEL82391.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
Length = 337
Score = 44.1 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVEKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGK 205
+ L +++ L ++ ++ + + + Q R+N L +++
Sbjct: 79 LRKD--LPQLIARLTKLEGLKDIGLTTNGVHLAKQAKALKDAGLKRVNISL-DAIEDYIF 135
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + I AG+ + V KG+ND
Sbjct: 136 QK-----INGRNVSTKPVLKGIEAAKAAGLEVKVNMVAKKGMNDS 175
>gi|221198572|ref|ZP_03571617.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2M]
gi|221207801|ref|ZP_03580808.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2]
gi|221172298|gb|EEE04738.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2]
gi|221181023|gb|EEE13425.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2M]
Length = 367
Score = 44.1 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 26/157 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C RE+ GS + + A L I + ++ TGG+PL+
Sbjct: 41 VIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEPLL 100
Query: 157 LSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ L+ +++ L + V L + ++ + L++AG
Sbjct: 101 R--RHLETLIERLAALTTVHGRPVELALTTNGALLAAKART------LRDAGLARVTV-- 150
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
A R+++A + + S +L GI
Sbjct: 151 -----SLDALDDAVFRRMSDADVPV---SRVLAGIEA 179
>gi|294102421|ref|YP_003554279.1| MiaB-like tRNA modifying enzyme [Aminobacterium colombiense DSM
12261]
gi|293617401|gb|ADE57555.1| MiaB-like tRNA modifying enzyme [Aminobacterium colombiense DSM
12261]
Length = 434
Score = 44.1 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 19/144 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C V S+ + L ++ S EV+ TG
Sbjct: 150 HSRAFVKIQDGCNHFCSYC-----VIPFVRGEPVSRPLNSVLEEVRSIADSGCTEVVLTG 204
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G L ++++ I V+ +RF S ++P IN EL+ L E +
Sbjct: 205 VHLGLYGQFGEVSLGELVRQAGAIPGVERIRFGS----LEPFGINDELLSALAETPQ--- 257
Query: 209 IAIHANHPYEFSEEAIAAISRLAN 232
H + P + ++ + R+
Sbjct: 258 FCPHLHLPLQSGDDT--VLQRMRR 279
>gi|299067006|emb|CBJ38201.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
CMR15]
Length = 373
Score = 44.1 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 37/220 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ E + E + ++ TGG+PL
Sbjct: 50 VTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGEPL 108
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP------ELIQCLKEAGKPVYI 209
+ ++++++ L R ++R + Q LK+AG
Sbjct: 109 LRKD--IERLVEMLA--------RLNTRDGKPLDLTLTTNGALLARKAQALKDAGLTRVT 158
Query: 210 A-------IHANHPYEFSEEAIAAISRL---ANAG-IILLSQSVLLKGINDDPEILANLM 258
+ + + G L V+ KG NDD + L
Sbjct: 159 VSLDAIDDATFRRMNDVDFAVAEVLHGIEVAQRVGLAPLKINMVVKKGDNDDQ--IVPLA 216
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASL 297
R F I ++ + D T+H+ ++ +++ L
Sbjct: 217 RHFRNSGIILRFIEYMD-VGVTNHWEMTSVVPSAEVIRRL 255
>gi|237653116|ref|YP_002889430.1| molybdenum cofactor biosynthesis protein A [Thauera sp. MZ1T]
gi|237624363|gb|ACR01053.1| molybdenum cofactor biosynthesis protein A [Thauera sp. MZ1T]
Length = 359
Score = 44.1 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 15/111 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE+ G + +LS ++ + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPREVFGDDYAFLPRRQLLSFEEILRVARLFVA-RGVRKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ + +++ L + V++ + ++ P+L + LK+AG
Sbjct: 102 LRKD--VDRLIGMLAALDGVEVT-LTTNGVLL------PKLARRLKDAGLH 143
>gi|239905086|ref|YP_002951825.1| hypothetical protein DMR_04480 [Desulfovibrio magneticus RS-1]
gi|239794950|dbj|BAH73939.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 388
Score = 44.1 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 66/202 (32%), Gaps = 16/202 (7%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ ++ C + C+ C R E +KD +A + E +IFTGG+PL+
Sbjct: 45 VAWEVTRACNLACKHC-RAEACLDPWPGEFDTKDAKALIDTFPETGSPI-IIFTGGEPLL 102
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215
+ +++ R +V P+ + + A+H
Sbjct: 103 RPD--IFDLVRHARSRD--LRCVMAPNGTLVTPENAREIKASGIARCSISIDAPTAADHD 158
Query: 216 -----PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
P F E A+ I L +AG+ + + + + + + L ++
Sbjct: 159 DFRGVPGAF-EGALRGIEYLKSAGMEFQINTTVTRHNMGNFKEIFKLAEKL---GAAAWH 214
Query: 271 LHHPDLAAGTSHFRLTIEEGQK 292
+ + I ++
Sbjct: 215 IFLLVPTGRAAQLGAEIITAKE 236
>gi|238020614|ref|ZP_04601040.1| hypothetical protein GCWU000324_00503 [Kingella oralis ATCC 51147]
gi|237867594|gb|EEP68600.1| hypothetical protein GCWU000324_00503 [Kingella oralis ATCC 51147]
Length = 323
Score = 44.1 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 71/210 (33%), Gaps = 21/210 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ +C C +C G K L+ + + A + S +V TGG+ + +
Sbjct: 19 VTDLCNYRCSYCLPNGYQGKAKPDELTLPEIQTIAAAFAQ-SGTRKVRLTGGEATLRAD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV------PIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L ++ TL +Q + + V Q +L L + H
Sbjct: 77 -LPDIIATLNAQPQIQHIALTTNGHQLGKKFPVYRQAGLTKLNISLDSFNPQTF---HKI 132
Query: 215 HPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRIKP---YY 270
+ S+ + I + N G + ++LL+ L +R +P +
Sbjct: 133 TGKDQSQTILRDIETILNTGFTSIKINTLLLR-----EHAQETLHDALDYIRTRPIALRF 187
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+ +++F+ + ++ +L +
Sbjct: 188 IELMQTGDNSAYFQQHHQNAAQLEQNLIAQ 217
>gi|207725239|ref|YP_002255635.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
MolK2]
gi|206590473|emb|CAQ37435.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
MolK2]
Length = 391
Score = 44.1 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ E + E + ++ TGG+PL
Sbjct: 68 VTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGEPL 126
Query: 156 ILSH-KRLQKVLKTL 169
+ +RL ++L L
Sbjct: 127 LRKDIERLVEMLARL 141
>gi|78044693|ref|YP_359280.1| MiaB-like tRNA modifying enzyme [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996808|gb|ABB15707.1| MiaB-like tRNA modifying enzyme [Carboxydothermus hydrogenoformans
Z-2901]
Length = 434
Score = 44.1 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 26/122 (21%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151
R +K+ C YC +C + L S+ E +A +++ +S E++ TG
Sbjct: 144 RAFVKIQEGCNSYCAYC-----IIPYARGPLRSRPLEDVVAEVKKLCQSGFSEIVLTGIH 198
Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
D +L ++ L I ++ LR S ++PQ EL+ L +
Sbjct: 199 TGAYGQEKQD-----LPKLADLVAELFKIPELKRLRLSS----IEPQDFTVELLDVLANS 249
Query: 204 GK 205
K
Sbjct: 250 PK 251
>gi|257438716|ref|ZP_05614471.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium
prausnitzii A2-165]
gi|257198851|gb|EEU97135.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium
prausnitzii A2-165]
Length = 326
Score = 44.1 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ +C + CR+C + ++ +L+ ++ A + V TGG+PL+ K
Sbjct: 16 VTDLCNLRCRYCMPDGVDKLEREDILTYEEFLRLAALFARC-GVDTVRVTGGEPLVR--K 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+++++K L+ I ++ + + +++ Q
Sbjct: 73 GVEQLVKGLKAIPGIRKVTMTTNAVLLEQQ 102
>gi|210623789|ref|ZP_03294049.1| hypothetical protein CLOHIR_02000 [Clostridium hiranonis DSM 13275]
gi|210153371|gb|EEA84377.1| hypothetical protein CLOHIR_02000 [Clostridium hiranonis DSM 13275]
Length = 465
Score = 44.1 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 88/220 (40%), Gaps = 39/220 (17%)
Query: 80 DNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
++N+ VHR P + L + H C + C++CF ++ K ++S + + AL +
Sbjct: 82 EDNYQFHPAFVHREPVVKALCLNVAHDCNLKCKYCFAKQGNFGGKPELMSFEVGKRALDF 141
Query: 138 IQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRI 192
+ S ++ F GG+PL ++ + ++++++ R I +H + +RF + +
Sbjct: 142 LVANSGSRRNLDIDFFGGEPL-MNFEVVKQLVEYGRSIEKEHGKNMRFT---ITTNGLLL 197
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
N E+I + E V +++ A + + +
Sbjct: 198 NDEIIDYINENMHNVVLSLDG-----------------RKA---VNDNMRMTINDKGSYD 237
Query: 253 ILANLMRTFVELRIKPYYLHH--------PDLAAGTSHFR 284
++ M+ VE R K Y + D + HFR
Sbjct: 238 VIVPKMQKLVEKRPKDKYYYVRGTFTRENLDFSKDILHFR 277
>gi|325525113|gb|EGD03003.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. TJI49]
Length = 355
Score = 44.1 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 16/88 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ + L+ +++ L R +R
Sbjct: 102 LRKN--LEFLIERLA--------RLTTR 119
>gi|84496509|ref|ZP_00995363.1| molybdenum cofactor biosynthesis protein A [Janibacter sp.
HTCC2649]
gi|84383277|gb|EAP99158.1| molybdenum cofactor biosynthesis protein A [Janibacter sp.
HTCC2649]
Length = 336
Score = 44.1 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 80/213 (37%), Gaps = 26/213 (12%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C E + K +L+ + ++ I + +V TGG+PL+
Sbjct: 25 VTDRCNLRCRYCMPAEGLPWLAKPEMLTDDELIRLVS-IFVALGVEQVRLTGGEPLLR-- 81
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYE 218
+ L ++ + + + + + L L AG V I++ P E
Sbjct: 82 RSLTDLVGRIAALTPRPRIAMTTNGIGL------DRLAGPLAAAGLDRVNISLDTVDPKE 135
Query: 219 FSEEAIA--------AISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
F++ + AG + + +V ++GIND +A+L+ +E +
Sbjct: 136 FADLTRRDRLKDVEAGLEAAREAGLVPVKVNAVAMRGINDHS--VADLLAWCLERGYELR 193
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
++ + + G ++ ++S
Sbjct: 194 FIEQM-PLDAQHGWDASTMIGSD---EIRTRLS 222
>gi|301059397|ref|ZP_07200319.1| radical SAM domain protein [delta proteobacterium NaphS2]
gi|300446478|gb|EFK10321.1| radical SAM domain protein [delta proteobacterium NaphS2]
Length = 453
Score = 44.1 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 66/200 (33%), Gaps = 19/200 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L CP C +C + + + ++ + Y K I + F L+
Sbjct: 210 VCLMTSTGCPYSCHYCASHFLF--PEFVQRNPEEISEEILYWHNKWGIRDFSFYDDALLV 267
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIHA 213
S K + +L+ + H +RFH+ I + I + L + G +
Sbjct: 268 SSDKHMAVLLERIAD--HNLNIRFHTPNAIHVKE-ITKSIALRLHQTGFQTIRLGLETSD 324
Query: 214 NHPY-EFSE-----EAIAAISRLANAGIILLSQS---VLLKGINDDPEILANLMRTFVEL 264
NH + + A+ L NAG +Q +++ P+ +A +
Sbjct: 325 NHKRWHLDKKISQGDFAHAMDHLRNAGFH-PNQIGVYIMVGLPEQSPDAVAETIHHADRW 383
Query: 265 RIKPYYLHHPDLAAGTSHFR 284
P YL T +
Sbjct: 384 GGIP-YLSEYSPIPHTRLWE 402
>gi|17545758|ref|NP_519160.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
GMI1000]
gi|17428052|emb|CAD14741.1| probable molybdenum cofactor biosynthesis protein a [Ralstonia
solanacearum GMI1000]
Length = 373
Score = 44.1 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ E + E + ++ TGG+PL
Sbjct: 50 VTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGEPL 108
Query: 156 ILSH-KRLQKVLKTL 169
+ +RL ++L L
Sbjct: 109 LRKDIERLVEMLARL 123
>gi|313893435|ref|ZP_07827007.1| tRNA methylthiotransferase YqeV [Veillonella sp. oral taxon 158
str. F0412]
gi|313442076|gb|EFR60496.1| tRNA methylthiotransferase YqeV [Veillonella sp. oral taxon 158
str. F0412]
Length = 431
Score = 44.1 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 23/128 (17%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
R +K+ C YC FC + L S+ E + + E++ TG
Sbjct: 145 RAFMKIQEGCNNYCSFC-----IIPYTRGKLKSRKIEDIVEEAKRLVDHGFHEIVLTG-- 197
Query: 154 PLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L + L V+K L I + +RF S + ++ EL++ L + K
Sbjct: 198 -IHLGNYGVELPGRPTLADVVKALLEIPELYRIRFGSIESV----EVSDELVE-LMDTDK 251
Query: 206 PVYIAIHA 213
V +H
Sbjct: 252 RVCPNLHL 259
>gi|302389502|ref|YP_003825323.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
gi|302200130|gb|ADL07700.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
Length = 463
Score = 44.1 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK-LLHVCPVYCRFCFRREMVGSQK 122
+EL+ L + + L+G+ + + L + H C + C++CF + + +
Sbjct: 63 IKELDELKARGFLFVEADLTRALEGLRQKKNVKALCLNVAHDCNLRCKYCFASKGHYNGE 122
Query: 123 GTVLSSKDTEAALAYIQEKS---QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
++ K ++A+ ++ E S + EV F GG+PL ++ ++ V+ R ++ R
Sbjct: 123 RRLMDKKVAQSAVDFLIEHSGNLKNLEVDFFGGEPL-MAFDTIKYVISYARSLEDRCGKR 181
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
FH + +N E+I L E + +
Sbjct: 182 FH-FTVTTNCTILNDEIIDYLHENMDNIVM 210
>gi|95928924|ref|ZP_01311669.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
gi|95134825|gb|EAT16479.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
Length = 319
Score = 44.1 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT----EAALAYIQEK 141
++ Y I + C + CR+C ++ +L ++ + A+
Sbjct: 3 LIDPYQRTINYLRLSITDQCNLRCRYCQPHGRAANRTRRLLRDREIMFLAQQAID----- 57
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ ++ TGG+PL+ S + ++L LR ++ +Q L + R P+L
Sbjct: 58 LGVEKIRITGGEPLVRS--GVIRLLSELRALEGLQHLVLTTNGL--LLSRYAPDLAAAGV 113
Query: 202 EAGKPVYIAIHANHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ ++ E + E I AG+ + V++ G+NDD +
Sbjct: 114 KRINVSIDSLRHERFREITRGGSLVEWCRGIDAAEKAGLTVKLNVVVMAGVNDDEVV 170
>gi|326201371|ref|ZP_08191243.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
2782]
gi|325988939|gb|EGD49763.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
2782]
Length = 436
Score = 44.1 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 11/110 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIF 149
+ R LK+ C +C +C + + S+ + + +++ S EV+
Sbjct: 140 KERTRAYLKIQEGCSQFCAYC-----IIPYARGPIRSRKPDDIIEEVRQLADSGFLEVVL 194
Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
TG L L +++ + I ++ +R S P +
Sbjct: 195 TGIHLASYGRELEDTSLLDIIRKIHSIDGIKRIRLGSIEPTTITKEFVEA 244
>gi|228920856|ref|ZP_04084195.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228838787|gb|EEM84089.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 337
Score = 44.1 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ L +++ L ++ ++ + + + Q
Sbjct: 79 LRKD--LPQLIARLTKLEGLKDIGLTTNGIHLAKQ 111
>gi|300691998|ref|YP_003752993.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
PSI07]
gi|299079058|emb|CBJ51720.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
PSI07]
Length = 387
Score = 44.1 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 75/220 (34%), Gaps = 37/220 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ E E + ++ TGG+PL
Sbjct: 64 VTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERIARLFIEH-GVEKIRLTGGEPL 122
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP------ELIQCLKEAGKPVYI 209
+ ++++++ L R H+R + Q LK+AG
Sbjct: 123 LRKD--IERLVEMLA--------RLHTRDGKPLDLTLTTNGALLARKAQSLKDAGLTRVT 172
Query: 210 A-------IHANHPYEFSEEAIAAISRL---ANAG-IILLSQSVLLKGINDDPEILANLM 258
+ + + N G L V+ KG NDD + +
Sbjct: 173 VSLDAIDDATFRRMNDVDFAVGEVLHGIEVAQNVGLAPLKLNMVVKKGDNDDQ--IVPMA 230
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVASL 297
R F I Y+ + D T+H+ ++ +++ L
Sbjct: 231 RHFRGSGIILRYIEYMD-VGATNHWAMTSVVPSAEVIRRL 269
>gi|320161385|ref|YP_004174609.1| molybdenum cofactor biosynthesis protein A [Anaerolinea thermophila
UNI-1]
gi|319995238|dbj|BAJ64009.1| molybdenum cofactor biosynthesis protein A [Anaerolinea thermophila
UNI-1]
Length = 328
Score = 44.1 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Query: 101 LLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C + + + ++ ++ + + + I ++ TGG+PL
Sbjct: 17 VTDRCNLRCVYCMPPQGIPLTSHDAIMRYEEIVEVVR-VAAEQGITDIRLTGGEPLAR-- 73
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
+ +++ + + ++ + + +R EL
Sbjct: 74 LGITELVHMIAAVPGIRDISMTTNGL--LLERFAGEL 108
>gi|281211029|gb|EFA85195.1| molybdenum cofactor synthesis 1 [Polysphondylium pallidum PN500]
Length = 676
Score = 43.7 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKS 142
+ G VH Y L C + C++C E V +L++ + L+ + S
Sbjct: 94 TDTFGRVHSYLRISL---TERCNLRCQYCMPEEGVPLQPTSQLLTNDEIIR-LSKLFVSS 149
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ ++ FTGG+PL+ ++ +++ + IK ++ + +
Sbjct: 150 GVSKIRFTGGEPLVRKD--VEPLIEEIGKIKGLKTIAMTTNGI 190
>gi|150018969|ref|YP_001311223.1| radical SAM domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149905434|gb|ABR36267.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 453
Score = 43.7 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 64 KEELNILPE-EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+EL ED + HS + Y I L ++H C + C++CF E
Sbjct: 65 IQELAEEGILYSEDQYEEIAHSSMD--DRDYIKAICLNVIHGCNLRCKYCFADEGEYHGH 122
Query: 123 GTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKH--VQI 177
G V+S+ + A+ Y+ ++S E+ GG+P L +++++K R + +
Sbjct: 123 GGVMSADTAKKAIDYVIKRSGPRKNIEIDLFGGEP-TLIMDTIKEIIKYARDNEEKWGKR 181
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+RF + + P+++ + + + +
Sbjct: 182 VRFT---MTTNATLLTPDMMDYMDKEMGNIIL 210
>gi|308051310|ref|YP_003914876.1| molybdenum cofactor biosynthesis protein A [Ferrimonas balearica
DSM 9799]
gi|307633500|gb|ADN77802.1| molybdenum cofactor biosynthesis protein A [Ferrimonas balearica
DSM 9799]
Length = 328
Score = 43.7 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C + + VL+ ++ + + ++ TGG+PL+ S
Sbjct: 16 MSVTDHCDFRCVYCMDEDPTFLPRDQVLTLEELHQIAQAF-TELGVEKIRLTGGEPLVKS 74
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVP 185
L +++ + + ++ L +
Sbjct: 75 D--LTYLVEQVAALPGLRDLCLTTNGS 99
>gi|237808516|ref|YP_002892956.1| molybdenum cofactor biosynthesis protein A [Tolumonas auensis DSM
9187]
gi|259495873|sp|C4LFK3|MOAA_TOLAT RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|237500777|gb|ACQ93370.1| molybdenum cofactor biosynthesis protein A [Tolumonas auensis DSM
9187]
Length = 336
Score = 43.7 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 63/185 (34%), Gaps = 21/185 (11%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G R+ L + C C +C + + L+ + + Y + + ++
Sbjct: 17 GFSRRFHYLRLS-VTEACNFRCTYCLPDGYRPDGRKSFLTVDEIRRVV-YGFAELGVKKI 74
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV--DPQRINPELIQCLKEA-- 203
TGG+P + L +++T+ ++ + + + Q+ ++ L +
Sbjct: 75 RLTGGEPSMRRD--LPAIIETVANTAGIEKVAMTTNGYRLKDRAQQWFDAGLRSLNVSID 132
Query: 204 ---GKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMR 259
+ + N E + + AG + +VLLK +ND L +
Sbjct: 133 SLDPRQFQLITGENKLVEI----LEGLEAAQKAGFRKIKVNTVLLKNLNDH-----ELSQ 183
Query: 260 TFVEL 264
L
Sbjct: 184 FLFWL 188
>gi|295106858|emb|CBL04401.1| Predicted Fe-S oxidoreductases [Gordonibacter pamelaeae 7-10-1-b]
Length = 335
Score = 43.7 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 62/193 (32%), Gaps = 25/193 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C C++ LS+ + + I + +IF+GG+PL+
Sbjct: 3 VSWMTTNKCNLKCVHCYQDAE--EASALELSTDEGRKMIDEIAR-AGFKVMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQ---RINPELIQCLKEAGKPVYIAI 211
+ L + LR F S ++ P+ R+ + + + A
Sbjct: 60 RPD------IYELVAHAASRGLRPVFGSNGTLITPEAAARLKEAGACAMGISVDSLDAAK 113
Query: 212 H-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
H H Y+ + I AG+ + ++ N D VE+
Sbjct: 114 HDKFRGLEHAYDLTMA---GIEACKQAGLPFQLHTTVVD-WNRDEVCAITDFA--VEIGA 167
Query: 267 KPYYLHHPDLAAG 279
+Y+
Sbjct: 168 MAHYVFFLIPVGR 180
>gi|325107590|ref|YP_004268658.1| GTP cyclohydrolase subunit MoaA [Planctomyces brasiliensis DSM
5305]
gi|324967858|gb|ADY58636.1| GTP cyclohydrolase subunit MoaA [Planctomyces brasiliensis DSM
5305]
Length = 339
Score = 43.7 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E V + VL+ ++ + ++ + +V TGG+PL+
Sbjct: 28 VTDRCNLRCFYCMPEENVEYLPRQEVLTFEELTRFVRCAVDRLGVNKVRITGGEPLVRKD 87
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ ++++ L I ++ L + ++D
Sbjct: 88 --VAELVRQLHGISGLKDLALTTNGILLDK 115
>gi|29840033|ref|NP_829139.1| MiaB-like tRNA modifying enzyme [Chlamydophila caviae GPIC]
gi|29834380|gb|AAP05017.1| MiaB-like tRNA modifying enzyme [Chlamydophila caviae GPIC]
Length = 421
Score = 43.7 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 17/126 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + S+ + L I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYC-----IIPYLRGRSRSRPIQEILDEISGLVSQGYQEVVIAG 188
Query: 152 GDPLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ + L +++ + IK ++ +R S +DP+ + +L L
Sbjct: 189 INVGDYQDEGKSLAHLIRQVDEIKGIERIRISS----IDPEDVQEDLRDVLLSGRHT--- 241
Query: 210 AIHANH 215
H++H
Sbjct: 242 -CHSSH 246
>gi|89094965|ref|ZP_01167895.1| hypothetical protein MED92_14018 [Oceanospirillum sp. MED92]
gi|89080749|gb|EAR59991.1| hypothetical protein MED92_14018 [Oceanospirillum sp. MED92]
Length = 477
Score = 43.7 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 85/243 (34%), Gaps = 33/243 (13%)
Query: 76 DPIGDNNHSPLKGIVHRYP-DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
D G ++P V +P ++L + C + C +C++ ++ +G +S + +
Sbjct: 83 DSNGVARYNPEPQKVENFPLTTVVLNVNTGCNLSCTYCYKEDLTTPSEGLKMSVETAIQS 142
Query: 135 LAYI---QEKSQIWEVIFTGGDPLI---LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ + + + V+F GG+PL L + + + ++ + ++
Sbjct: 143 VEMLLKESPDQRQYNVVFFGGEPLSNMPLIREVVAYCERRFADLEARVDFTLTTNATLL- 201
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE-------------AIAAISRL--ANA 233
N +LI E + I + P ++ + L
Sbjct: 202 ----NEDLIDWFNEHRFGLTI--SMDGPKAMHDKNRITVGGQGTYDVVKKKVDMLLSRYT 255
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
+ + L +GI D I +L + + D+AA F LT EE +++
Sbjct: 256 ARPVGCRVTLTRGITDVEAIFNHLYHDLGFAEVGFGPVTSGDIAA----FNLTPEEMEEV 311
Query: 294 VAS 296
Sbjct: 312 FEG 314
>gi|134295140|ref|YP_001118875.1| molybdenum cofactor biosynthesis protein A [Burkholderia
vietnamiensis G4]
gi|134138297|gb|ABO54040.1| GTP cyclohydrolase subunit MoaA [Burkholderia vietnamiensis G4]
Length = 370
Score = 43.7 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
Query: 82 NHSPLKGIVHRY--PDRIL-LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEA 133
H+P + R+ P R L + + C C +C R++ +L+ ++ E
Sbjct: 21 AHTPDGALTDRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKDYPFLPHSALLTHEEIER 80
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ ++ TGG+PL+ + L+ +++ L +
Sbjct: 81 VARLFVAH-GVEKIRITGGEPLLRKN--LEFLIERLARL 116
>gi|319793190|ref|YP_004154830.1| molybdenum cofactor biosynthesis protein a [Variovorax paradoxus
EPS]
gi|315595653|gb|ADU36719.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus
EPS]
Length = 386
Score = 43.7 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 39/101 (38%), Gaps = 12/101 (11%)
Query: 81 NNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDT 131
+ P G++ R L + + C C +C +++ +LS ++
Sbjct: 27 DIAVPATGLLRDRLGRPLTDLRISVTDRCNFRCSYCMPKDVFDKDYKYLPHSALLSFEEM 86
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ ++ TGG+PL+ + ++ +++ L I
Sbjct: 87 TRLARLFAAH-GVRKIRLTGGEPLLRKN--IEALIEQLAEI 124
>gi|269797947|ref|YP_003311847.1| MiaB-like tRNA modifying enzyme [Veillonella parvula DSM 2008]
gi|269094576|gb|ACZ24567.1| MiaB-like tRNA modifying enzyme [Veillonella parvula DSM 2008]
Length = 431
Score = 43.7 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 55/263 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C YC FC + L S+ + + + E++ TG
Sbjct: 143 KTRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVQEAKRLVDHGFHEIVLTG 197
Query: 152 GDPLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-- 201
+ L + L V+K L I ++ +RF S + ++ EL++ +
Sbjct: 198 ---IHLGNYGVELPGRPTLADVVKALLEIPNLYRIRFGSIESV----EVSDELVELMATN 250
Query: 202 ---EAGKPVYIAIHANHP----------YEFSEEAIAAISRLANAGIILLSQSVLLKGI- 247
+ + ++H E+ + + SR+ + I + ++ G
Sbjct: 251 KRVCPHLHLPLQAGSDHVLKLMKRHYTLQEYKDLITSLRSRIKDLSIT----TDIIAGFP 306
Query: 248 NDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIE---EGQKIVASLKE 299
+ E + T E+ PY + AA + ++ ++ L +
Sbjct: 307 QETDEDFEETLNTVREIGFTHIHAFPYSIREGTPAATMAD-QVPEAVKKTRVALLNGLSQ 365
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
SG Y G G++ I
Sbjct: 366 --SGYE--RYAKSRIGKPGEILI 384
>gi|195129313|ref|XP_002009100.1| GI11448 [Drosophila mojavensis]
gi|193920709|gb|EDW19576.1| GI11448 [Drosophila mojavensis]
Length = 371
Score = 43.7 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 57 ARQFI-PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
RQ P N +R SPL R+ + + L C + C +C
Sbjct: 17 RRQTWQPVPSSTNWRRRQRVRQQSAAAASPLTDRFGRHHTYLRISLTERCNLRCDYCMPA 76
Query: 116 EMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
E V K +LS+++ I + + ++ TGG+P + + +V+ L+ +
Sbjct: 77 EGVPLQPKSQLLSTEEVLRLAR-IFVEQGVRKIRLTGGEPTVRRD--IVEVVAQLKALPQ 133
Query: 175 VQILRFHSRVPIV 187
++ + + ++
Sbjct: 134 LEHVGITTNGLVL 146
>gi|70726341|ref|YP_253255.1| hypothetical protein SH1340 [Staphylococcus haemolyticus JCSC1435]
gi|68447065|dbj|BAE04649.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 448
Score = 43.7 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + + E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLV--NAGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I LK + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLEEIDGLERIRISS----IEASQLTDEVIDVLKRSNKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|116753780|ref|YP_842898.1| radical SAM domain-containing protein [Methanosaeta thermophila PT]
gi|116665231|gb|ABK14258.1| Radical SAM domain protein [Methanosaeta thermophila PT]
Length = 383
Score = 43.7 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ + P +++ CP C +C+ E GS ++ + K+ L ++ +
Sbjct: 1 MQRKRPFHVMIIPTLGCPSKCSYCWSSEE-GSPVMSIDTVKEIVEWLKLFRDDPVTF--T 57
Query: 149 FTGGDPLILSHKRLQKVLKTLRY-IKHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
F GG+PL+ + +K L L + H+ + + R+ PEL + LKE P
Sbjct: 58 FHGGEPLLAGVEFYRKALPLLADGLSHLTPSFALQTNLW-----RLTPELAEVLKEYDVP 112
Query: 207 VYIAIHANHPYEFSEEAIA 225
+ + P E ++ +
Sbjct: 113 I--GSSLDGPKEINDLQRS 129
>gi|298706473|emb|CBJ29460.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 369
Score = 43.7 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Query: 80 DNNHSPLKGIVH--------RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
+ P G H R+ + + + L C + C +C + V Q + + ++
Sbjct: 27 EGAVRPPPGHEHSMLSDTHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQSKMINQQE 86
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LA + + + ++ TGG+PL+ L +++ L ++ V+ + +
Sbjct: 87 ILRLASMFVDAGVDKIRLTGGEPLVRKD--LPDIVRALSSLEGVRNVGVTTNGI 138
>gi|229099205|ref|ZP_04230137.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-29]
gi|228684186|gb|EEL38132.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-29]
Length = 339
Score = 43.7 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 24/165 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLVKVFVS-IGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ L K++ L I + + + + Q + LKEAG
Sbjct: 81 LRKD--LTKLIACLVKIDGLVDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDAI 132
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 133 DDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|83590961|ref|YP_430970.1| GTP cyclohydrolase subunit MoaA [Moorella thermoacetica ATCC 39073]
gi|123725642|sp|Q2RGL2|MOAA_MOOTA RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|83573875|gb|ABC20427.1| GTP cyclohydrolase subunit MoaA [Moorella thermoacetica ATCC 39073]
Length = 323
Score = 43.7 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C V + + + A LA + + I + TGG+PL+ +
Sbjct: 16 ITDRCNLRCRYCMPATGVPLKGHEDILRLEEIATLARVAAGTGISRIRLTGGEPLVRKNV 75
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVP 185
+++ L I ++ + +
Sbjct: 76 V--TLVRELAAIPGLEEISLTTNGI 98
>gi|240145024|ref|ZP_04743625.1| AtsB/chuR-related protein [Roseburia intestinalis L1-82]
gi|257202924|gb|EEV01209.1| AtsB/chuR-related protein [Roseburia intestinalis L1-82]
gi|291535351|emb|CBL08463.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Roseburia
intestinalis M50/1]
Length = 437
Score = 43.7 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGD 153
++ + + +C + C +C+ + +LS + +A + Y++++ ++ V F GG+
Sbjct: 96 HKLEIMVCTICNLNCVYCYANGGNYYGEEQMLSYEVVDALVRYLKQEQIKVEMVQFFGGE 155
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P L +K + + K + + + + + + EL+ + + G + +
Sbjct: 156 P-ALGYKMISYICKKFKE----NDILVQNYGMVTNFTFLPEELLDDIVKYGINLTV--SI 208
Query: 214 NHPYEFSEEAI--------------AAISRLANAG 234
+ P E + E ++RL G
Sbjct: 209 DGPKEITNEQRISRTQNMDVYDTIVKNLNRLRKRG 243
>gi|254252868|ref|ZP_04946186.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia dolosa
AUO158]
gi|124895477|gb|EAY69357.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia dolosa
AUO158]
Length = 369
Score = 43.7 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE+ +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPREVFDKDYPFLPHSALLAHEEIERVARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLARL 116
>gi|237807379|ref|YP_002891819.1| nitrogenase cofactor biosynthesis protein NifB [Tolumonas auensis
DSM 9187]
gi|237499640|gb|ACQ92233.1| nitrogenase cofactor biosynthesis protein NifB [Tolumonas auensis
DSM 9187]
Length = 476
Score = 43.7 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 78/233 (33%), Gaps = 38/233 (16%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQE 140
H+Y R+ L + C V C +C R+ G + + + A A
Sbjct: 46 PSAHHKYA-RMHLAVAPACNVQCHYCNRKYDCSNESRPGVVSELLNVEQALQKARAVAAA 104
Query: 141 KSQIWEVIFTG-GDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQ 198
Q+ + G GDPL + L+ LR + V++ + PQ ++ +
Sbjct: 105 IPQLSVIGIAGPGDPLANQTRTFD-TLEGLRSALPDVKLC-VSTNGLA-LPQSVDS--LV 159
Query: 199 CLKEAGKPVYIAIHANH---------------------PYEFSEEAIAAISRLANAGIIL 237
L + + H ++ I + +L G+++
Sbjct: 160 ELGVDHVTITMNAIDAHVSAGIYDWIYFDGVRYRGKEGAQILIDQQIEGMRKLMENGVLV 219
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA-GTSHFRLTIEE 289
SVL+ G+ND L+ + ++ + + +H+ L+ +
Sbjct: 220 KINSVLIPGVNDLH--LSEVSHAIRDMGAFLHNIMPLISKPEHGTHYGLSGQR 270
>gi|168335412|ref|ZP_02693503.1| MiaB-like tRNA modifying enzyme YliG [Epulopiscium sp. 'N.t.
morphotype B']
Length = 446
Score = 43.7 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 43/235 (18%), Positives = 80/235 (34%), Gaps = 32/235 (13%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
IAR + + E+ E+ P +N P Y +K+ C +C +C
Sbjct: 113 IARNVL-DQNEVKQHFEDVNRPHLEN--MPRVLTTGGY--FAYIKIAEGCNSHCTYCIIP 167
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYI 172
+ G + K E + + + E+I + + + L +L+ L I
Sbjct: 168 SLRGQY-RSRPKEKIVEEVMQ--LAEDGVSEIILVAQNTTMYGIDKGYTLTNLLQELSDI 224
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP----------YEFSE 221
++ +R P+ I ELI+ +K K Y+ I H +
Sbjct: 225 DGIEWIRI----LYCYPENITDELIEEIKVNSKVCKYLDIPIQHSSDQILKRMNRKSSNA 280
Query: 222 EAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMR-----TFVELRIKPYY 270
I +L + ++ +S L+ G + E NL+ L + Y
Sbjct: 281 FLKQLIQKLRDNIPNIMIRSTLIVGFPGETEEDFNNLIDFVKETKLDRLGVFTYS 335
>gi|167769111|ref|ZP_02441164.1| hypothetical protein ANACOL_00434 [Anaerotruncus colihominis DSM
17241]
gi|167668751|gb|EDS12881.1| hypothetical protein ANACOL_00434 [Anaerotruncus colihominis DSM
17241]
Length = 441
Score = 43.7 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 40/280 (14%), Positives = 82/280 (29%), Gaps = 43/280 (15%)
Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
P LK+ C C +C R +++ AA + +
Sbjct: 144 PYFAYLKVAEGCDNRCSYCAIPLIRGPFRSRPMENIVAEAQRLAACGVTELNVVAQDTTR 203
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-Y 208
G D + L ++L+ L + V+ +R + P RI L+ + K V Y
Sbjct: 204 YGED--LYGRLALPELLEKLCRLDGVRWVR----MLYCYPDRITDRLLDVMAREEKIVKY 257
Query: 209 IAIHANH--------------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE-I 253
+ I H + + ++ ++ ++ L+ G + +
Sbjct: 258 MDIPIQHVNGRILSLMNRRGDAGSLTA----LMEKIRARVPGVVLRTTLITGFPTETQGE 313
Query: 254 LANLMRTFVELRIK----PYYLHHPDLAAGTSHFRLTIE----EGQKIVASLKEKISGLC 305
L +R + Y D A +L E Q I+ + G
Sbjct: 314 FEELCEFVQRVRFERLGCFAYSAEEDTPAALMDGQLDEEEKRRRAQIIMEQQYGVMEGFN 373
Query: 306 Q----PFYILDLPGGYGKVKIDTHNIKKVG-NGSYCITDH 340
+ + + G G++ + + + H
Sbjct: 374 RSQIGRRLTVAVEGREGRLWYGRSYMDAPDIDSRVYFSGH 413
>gi|194016213|ref|ZP_03054827.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus ATCC
7061]
gi|194011686|gb|EDW21254.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus ATCC
7061]
Length = 305
Score = 43.7 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 26/149 (17%)
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
+ K +LS ++ E + + ++ TGG+PL+ L +++ L I +
Sbjct: 9 DYPFLNKEELLSFEEIEQLATLFAKDLGVVKIRITGGEPLMRKD--LPILIEKLSKIPGI 66
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE------------- 222
+ + + ++ P + LK+AG + +
Sbjct: 67 EDIAMTTNGTLL------PVYAEKLKKAGLQRVTI----SLDSLNPDRFKQMNGRNISIQ 116
Query: 223 -AIAAISRLANAGIILLSQSVLLKGINDD 250
I AG+ + V+ KG+ND
Sbjct: 117 KVFDGIEAAKKAGLAIKINMVVQKGVNDQ 145
>gi|228952519|ref|ZP_04114596.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228807130|gb|EEM53672.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 337
Score = 43.7 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 20 VIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFNEIERLARLFISM-GVNKIRLTGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ L K++ L ++ ++ + + + Q
Sbjct: 79 LRKD--LPKLIARLTNLEGLKDIGLTTNGIHLAKQ 111
>gi|229079338|ref|ZP_04211882.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-2]
gi|228704006|gb|EEL56448.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-2]
Length = 333
Score = 43.7 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 16 VIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFNEIERLARLFISM-GVNKIRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ L K++ L ++ ++ + + + Q
Sbjct: 75 LRKD--LPKLIARLTNLEGLKDIGLTTNGIHLAKQ 107
>gi|150002881|ref|YP_001297625.1| putative transcriptional regulator [Bacteroides vulgatus ATCC 8482]
gi|237709730|ref|ZP_04540211.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|149931305|gb|ABR38003.1| putative transcriptional regulator [Bacteroides vulgatus ATCC 8482]
gi|229456366|gb|EEO62087.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 453
Score = 43.7 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 69/167 (41%), Gaps = 20/167 (11%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
G+++ + G + RI L + + C + C++CF +Q+ +++ +
Sbjct: 67 ASNKGEHSTNIQNGSKRKVIKRITLHISNDCNLRCKYCFGGGGSYNQERNLMTEQTAIEF 126
Query: 135 LAY-IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR------YIKHVQILRFHSRVPIV 187
+ + +++ ++ +++F GG+P +L+ K ++ V + I + + I+
Sbjct: 127 VDFCVEQFERVEKIVFFGGEP-MLNLKGMEIVCNRFKYYKEEGKIDILPNFVIITNGTIL 185
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
++ +K + I + P E ++ I R+ G
Sbjct: 186 -----TDRMLAFIKRNIS--AMTISIDGPKEIND-----IQRIYKNG 220
>gi|125579468|gb|EAZ20614.1| hypothetical protein OsJ_36224 [Oryza sativa Japonica Group]
Length = 382
Score = 43.7 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 49/129 (37%), Gaps = 4/129 (3%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + + L C + C++C E V + +LS + + S + ++ T
Sbjct: 81 RFHNYLRISLTERCNLRCQYCMPAEGVELTPSSELLSHDEIIRVAD-LFVTSGVDKIRLT 139
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P I ++ + L +K ++ L + ++ + + + + +
Sbjct: 140 GGEPTIRKD--IEDICLHLSGLKGLKTLAMTTNGLVLSKKLPRLKDLSFMTRRKGHSRVM 197
Query: 211 IHANHPYEF 219
+ E
Sbjct: 198 ESIDAAIEL 206
>gi|315650922|ref|ZP_07903963.1| molybdenum cofactor biosynthesis protein A [Eubacterium saburreum
DSM 3986]
gi|315486836|gb|EFU77177.1| molybdenum cofactor biosynthesis protein A [Eubacterium saburreum
DSM 3986]
Length = 323
Score = 43.7 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 24/174 (13%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
++ Y +I + + C C +C LS + +A+ K I
Sbjct: 1 MIDSYNRKIDYMRISVTNRCNFRCTYCMPETKKVDD---TLSLDEIYQ-VAFAASKCGIT 56
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR---INPEL------ 196
+ TGG+PL+ + ++ L I V+ + + + + L
Sbjct: 57 KFKITGGEPLVR--DGIVDFIRRLHDIDSVKDITMTTNGFYLYKYAKSLADAGLSSVNIS 114
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ LK+ + + + + I+ AG+ +VL +G+N+D
Sbjct: 115 LDSLKK--ERFIKITGVDAL----SDVVKGINEAKRAGLSTKINTVLQRGVNED 162
>gi|149069513|gb|EDM18954.1| molybdenum cofactor synthesis 1 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 636
Score = 43.7 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + CR+C E V L + + LA + K + ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCRYCMPEEGVSLTPKADLLTTEEILTLARLFVKEGVDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVARLHQLEGLRTIGVTTNGI 158
>gi|301165856|emb|CBW25429.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 433
Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C C FC G K ++ E A I++ E++ TG
Sbjct: 144 HTRAFLKIQDGCNYVCSFCIIPFARGRSKAISINGA-LENAKKLIED--GFKEIVLTGVN 200
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G+ S ++L ++K L ++ ++ LR S V+P I EL++ K + K
Sbjct: 201 IGEYETSSGEKLTDMVKALLDLEGLERLRLSS----VEPNTITDELLEVFKSSPK 251
>gi|261365895|ref|ZP_05978778.1| molybdenum cofactor biosynthesis protein A [Neisseria mucosa ATCC
25996]
gi|288565541|gb|EFC87101.1| molybdenum cofactor biosynthesis protein A [Neisseria mucosa ATCC
25996]
Length = 325
Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 34/100 (34%), Gaps = 6/100 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ + R+ + +C C +C +G K L+ + E S
Sbjct: 4 LTDSFNRRLTYLRLSVTDLCNYRCTYCLPDGYIGKAKPDELTLPEIETLAQTFAR-SGTR 62
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++ TGG+P + L ++ R ++ + +
Sbjct: 63 KIRLTGGEPTLRRD--LADIIAICRAQPQIESVALTTNAF 100
>gi|50841594|ref|YP_054821.1| radical SAM superfamily protein [Propionibacterium acnes KPA171202]
gi|289424485|ref|ZP_06426268.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes SK187]
gi|50839196|gb|AAT81863.1| conserved radical SAM superfamily protein [Propionibacterium acnes
KPA171202]
gi|289155182|gb|EFD03864.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes SK187]
Length = 364
Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 14/150 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
C + C +C+RR+ G + ++ + ++ Q V GG+P L
Sbjct: 10 PTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEGVRTTGQPAHVQLAGGEP-TLVPS 68
Query: 161 RLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-Y 217
++ V K + I R+ + + R++ ++I LK V +++ P +
Sbjct: 69 LIEHVAKRVVEI------RWGKVTCGIQTNAARLDGDIIAMLKRHSVRVGVSVDGPPPVH 122
Query: 218 EFSEEAIAAISR----LANAGIILLSQSVL 243
E + + A R LA+A I + +VL
Sbjct: 123 EKTRGSAAQTFRGLLALAHADIPVRVTTVL 152
>gi|89898549|ref|YP_515659.1| hypothetical protein CF0742 [Chlamydophila felis Fe/C-56]
gi|89331921|dbj|BAE81514.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
Length = 421
Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 14/128 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C + G + + + E + + EV+ G +
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRS-RSRPAREVLEEISGIVSQ--GYREVVIAGIN 190
Query: 154 PLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL-----KEAGKP 206
L +++ + I+ ++ +R S +DP+ + +L L
Sbjct: 191 VGDYQDEGHSLAHLIRRVDEIEGIERIRISS----IDPEDVQEDLRDVLLSGKHTCHSSH 246
Query: 207 VYIAIHAN 214
+ + +N
Sbjct: 247 LVLQSGSN 254
>gi|70725785|ref|YP_252699.1| hypothetical protein SH0784 [Staphylococcus haemolyticus JCSC1435]
gi|82592973|sp|Q4L8D2|MOAA_STAHJ RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|68446509|dbj|BAE04093.1| moaA [Staphylococcus haemolyticus JCSC1435]
Length = 340
Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 35/90 (38%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-----EKSQIWEVIFTGGDPL 155
+ C C +C +E+ G L + ++ + + ++ TGG+PL
Sbjct: 20 VTDRCNFRCDYCMPKEIFGDD-YVFLPKDELLTFEEMVRIAKVYAELGVKKLRITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L +++ L I ++ + +
Sbjct: 79 LRRN--LYQLIAELNQIDGIEDIGMTTNGL 106
>gi|311745156|ref|ZP_07718941.1| molybdenum cofactor biosynthesis protein A [Algoriphagus sp. PR1]
gi|311302339|gb|EAZ81895.2| molybdenum cofactor biosynthesis protein A [Algoriphagus sp. PR1]
Length = 338
Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 61/177 (34%), Gaps = 26/177 (14%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y L+ C + C++C E + + ++++ + E+ + +
Sbjct: 16 GRTHDYLRISLI---EKCNLRCQYCMPEEGIPLTPSKFLMNADEIESLARTF-VNLGVKK 71
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ TGG+PL+ + +L L L + + + K+
Sbjct: 72 IRLTGGEPLLRKD--FEAILAKLSQFP--VDLSITTNGILA------DRFLPIFKKHQLK 121
Query: 207 VYIAIHANHP-----YEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ + E + E+ + + G + VL+KGINDD +
Sbjct: 122 -KVNFSLDTLKEERFKEITRRSGYEKTMENLDLFIREGFEVKLNIVLMKGINDDEVV 177
>gi|237725121|ref|ZP_04555602.1| transcriptional regulatory protein [Bacteroides sp. D4]
gi|229436387|gb|EEO46464.1| transcriptional regulatory protein [Bacteroides dorei 5_1_36/D4]
Length = 412
Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 69/167 (41%), Gaps = 20/167 (11%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
G+++ + G + RI L + + C + C++CF +Q+ +++ +
Sbjct: 26 ASNKGEHSTNIQNGNKRKVIRRITLHISNDCNLRCKYCFGGGGSYNQERNLMTEQTAIEF 85
Query: 135 LAY-IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR------YIKHVQILRFHSRVPIV 187
+ + +++ ++ +++F GG+P +L+ K ++ V + I + + I+
Sbjct: 86 VDFCVEQFERVEKIVFFGGEP-MLNLKGMEIVCNRFKYYKEEGKIDILPNFVIITNGTIL 144
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
++ +K + I + P E ++ I R+ G
Sbjct: 145 -----TDRMLAFIKRNIS--AMTISIDGPKEIND-----IQRIYKNG 179
>gi|289427369|ref|ZP_06429082.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes J165]
gi|295129634|ref|YP_003580297.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes SK137]
gi|289159299|gb|EFD07490.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes J165]
gi|291375565|gb|ADD99419.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes SK137]
gi|332674504|gb|AEE71320.1| conserved radical SAM superfamily protein [Propionibacterium acnes
266]
Length = 364
Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 14/150 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
C + C +C+RR+ G + ++ + ++ Q V GG+P L
Sbjct: 10 PTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEGVRTTGQPAHVQLAGGEP-TLVPS 68
Query: 161 RLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-Y 217
++ V K + I R+ + + R++ ++I LK V +++ P +
Sbjct: 69 LIEHVAKRVVEI------RWGKVTCGIQTNAARLDGDIIAMLKRHSVRVGVSVDGPPPVH 122
Query: 218 EFSEEAIAAISR----LANAGIILLSQSVL 243
E + + A R LA+A I + +VL
Sbjct: 123 EKTRGSAAQTFRGLLALAHADIPVRVTTVL 152
>gi|157822765|ref|NP_001100351.1| molybdenum cofactor biosynthesis protein 1 [Rattus norvegicus]
gi|149069512|gb|EDM18953.1| molybdenum cofactor synthesis 1 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 480
Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + CR+C E V L + + LA + K + ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCRYCMPEEGVSLTPKADLLTTEEILTLARLFVKEGVDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVARLHQLEGLRTIGVTTNGI 158
>gi|187927999|ref|YP_001898486.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
12J]
gi|187724889|gb|ACD26054.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
12J]
Length = 373
Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ E E + ++ TGG+PL
Sbjct: 50 VTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGEPL 108
Query: 156 ILSH-KRLQKVLKTL 169
+ +RL ++L L
Sbjct: 109 LRKDIERLVEMLARL 123
>gi|300860220|ref|ZP_07106307.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
TUSoD Ef11]
gi|295112913|emb|CBL31550.1| molybdenum cofactor biosynthesis protein A, bacterial [Enterococcus
sp. 7L76]
gi|300849259|gb|EFK77009.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
TUSoD Ef11]
Length = 321
Score = 43.7 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 10 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEDIKKVKLTGGE 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 69 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 98
>gi|29375960|ref|NP_815114.1| molybdopterin cofactor biosynthesis protein A, putative
[Enterococcus faecalis V583]
gi|256965220|ref|ZP_05569391.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
HIP11704]
gi|257419205|ref|ZP_05596199.1| predicted protein [Enterococcus faecalis T11]
gi|29343422|gb|AAO81184.1| molybdopterin cofactor biosynthesis protein A, putative
[Enterococcus faecalis V583]
gi|256955716|gb|EEU72348.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
HIP11704]
gi|257161033|gb|EEU90993.1| predicted protein [Enterococcus faecalis T11]
Length = 324
Score = 43.7 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEDIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|15898641|ref|NP_343246.1| coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus
P2]
gi|284175851|ref|ZP_06389820.1| coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus
98/2]
gi|13815098|gb|AAK42036.1| Coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus
P2]
gi|261603136|gb|ACX92739.1| Radical SAM domain protein [Sulfolobus solfataricus 98/2]
Length = 350
Score = 43.7 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 73/197 (37%), Gaps = 27/197 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ CP+ C+ C R + LS+++++ L I ++ ++FTGGD
Sbjct: 7 PHLVFWEVTKACPLSCKHC-RANAIDKPLPGELSTEESKKLLEDIARFGKVV-IVFTGGD 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL S + + K+L I + R+ E ++ + + Y++I
Sbjct: 65 PLSRSDIFEIMEYAKSLGLIVSI---------APSPSYRLRDETMKMISNYAR--YMSIS 113
Query: 213 ANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + + A+ I GI + +++ K + L L++
Sbjct: 114 IDGATSQTHDWLRGLGSYNYALRGIELGLKYGIQVQVNTLVWKKSYSELPFLVKLLKEL- 172
Query: 263 ELRIKPYYLHHPDLAAG 279
+K + +
Sbjct: 173 --GVKVWEVFFLIPVGR 187
>gi|323138499|ref|ZP_08073568.1| nitrogenase cofactor biosynthesis protein NifB [Methylocystis sp.
ATCC 49242]
gi|322396295|gb|EFX98827.1| nitrogenase cofactor biosynthesis protein NifB [Methylocystis sp.
ATCC 49242]
Length = 519
Score = 43.7 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 34/217 (15%), Positives = 63/217 (29%), Gaps = 34/217 (15%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + + LA Q+
Sbjct: 70 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAAKKVLAVASAIPQM 129
Query: 145 WEVIFTG-GDPL---------------ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ G GDPL +L L HV+ + + VD
Sbjct: 130 TVLGIAGPGDPLANPAKTFKTFELISEAAPDIKLCLSTNGLALPDHVETI----KKFNVD 185
Query: 189 PQRINPEL------IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
I + + + +E + + L GI+ SV
Sbjct: 186 HVTITINMTDPDIGAEIYPWVFWKHKRVTGKDAAKILTERQLQGLEMLTANGILCKVNSV 245
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
++ GINDD + R + + +
Sbjct: 246 MIPGINDDHLVTV--NREVKSRGAFLHNIMPLISSPE 280
>gi|156397953|ref|XP_001637954.1| predicted protein [Nematostella vectensis]
gi|156225070|gb|EDO45891.1| predicted protein [Nematostella vectensis]
Length = 531
Score = 43.7 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKS 142
+ G H Y L C + C++C + + + VLSS++ +
Sbjct: 15 TDTFGRQHNYLRISL---TERCNLRCQYCMPEDGIKLTPSNEVLSSEEIILIARMFVK-Q 70
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ ++ TGG+PL+ + ++ + L I+ +Q L + +
Sbjct: 71 GVTKIRLTGGEPLVRKD--IIELCEELGSIEGLQDLGMTTNGITL 113
>gi|168204736|ref|ZP_02630741.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens E str.
JGS1987]
gi|170663578|gb|EDT16261.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens E str.
JGS1987]
Length = 434
Score = 43.7 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 13/126 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SKD + L I+ E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCL-----IPYTRGSVCSKDPKKVLEEIRSLADHGFKEIILSG 195
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L +L+ + I ++ +R S P + + I LK+
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVV-RRILALKKLCPH 254
Query: 207 VYIAIH 212
++++
Sbjct: 255 FHLSLQ 260
>gi|169343507|ref|ZP_02864506.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens C str.
JGS1495]
gi|169298067|gb|EDS80157.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens C str.
JGS1495]
Length = 434
Score = 43.7 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 13/126 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SKD + L I+ E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCL-----IPYTRGSVCSKDPKKVLEEIRSLADHGFKEIILSG 195
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L +L+ + I ++ +R S P + + I LK+
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVV-RRILALKKLCPH 254
Query: 207 VYIAIH 212
++++
Sbjct: 255 FHLSLQ 260
>gi|295102362|emb|CBK99907.1| GTP cyclohydrolase subunit MoaA [Faecalibacterium prausnitzii L2-6]
Length = 325
Score = 43.7 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ +C + CR+C + ++ VL+ ++ A + V TGG+PL+ K
Sbjct: 16 VTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLRLAALFARC-GVDTVRVTGGEPLVR--K 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVP 185
+ +++ L+ I ++ + +
Sbjct: 73 GVDQLVAGLKAIPGIRKVTMTTNGI 97
>gi|241662581|ref|YP_002980941.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
12D]
gi|240864608|gb|ACS62269.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
12D]
Length = 373
Score = 43.7 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ E E + ++ TGG+PL
Sbjct: 50 VTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGEPL 108
Query: 156 ILSH-KRLQKVLKTL 169
+ +RL ++L L
Sbjct: 109 LRKDIERLVEMLARL 123
>gi|187924899|ref|YP_001896541.1| molybdenum cofactor biosynthesis protein A [Burkholderia
phytofirmans PsJN]
gi|187716093|gb|ACD17317.1| molybdenum cofactor biosynthesis protein A [Burkholderia
phytofirmans PsJN]
Length = 369
Score = 43.7 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +LS ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRAVFDKDYTFLPHSALLSFEEIERLARLFVAH-GVEKIRLTGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLAQL 116
>gi|24212660|sp|O57854|MOAA_PYRHO RecName: Full=Probable molybdenum cofactor biosynthesis protein A
Length = 310
Score = 43.7 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 57/157 (36%), Gaps = 18/157 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C + C +C R + ++ ++ E + + + I +V TGG+P I
Sbjct: 17 LTKECNLSCFYCHREGQL--DGERFMTPEEIERIVR-VASRLGIKKVKLTGGEPTIRKD- 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKEAGKPVY-IAIHA 213
+ ++++ L+ +V L + + + + L + Y +
Sbjct: 73 -ILEIIRRLK--PYVVDLSLTTNGTTMYVLAEKLKEAGLDRVNISLDTLDRKKYKMITGF 129
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N E + A + V++KG+NDD
Sbjct: 130 NVLDEVIKGIKKATKLFY----PVKLNMVVMKGVNDD 162
>gi|304439005|ref|ZP_07398925.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372494|gb|EFM26080.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 288
Score = 43.7 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 17/153 (11%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTE-AALAYIQEKSQIWEVIFTGGDP 154
++++ C C FC M + ++ + Y++E+ V GD
Sbjct: 17 LIVQATVGCSYNKCDFCS---MYKDDTFHLRDLEELKVEVKEYLEERPFYKRVFIADGDA 73
Query: 155 LILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L LS+ +L + +++++ R S D R E ++ L+E G + +
Sbjct: 74 LCLSNDKLVDLCDFFAKNMENLE--RITSYATAKDILRKTDEELRELREHGIEMVYVGYE 131
Query: 214 NHPYEFSEEAIAA---------ISRLANAGIIL 237
+ E ++ + AGI +
Sbjct: 132 SGSDEILKDVNKNSTAEEYILATKKAKAAGIKV 164
>gi|167837373|ref|ZP_02464256.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis MSMB43]
Length = 370
Score = 43.7 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + G +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + ++ +++ L +
Sbjct: 102 LRKN--IEFLIERLAKM 116
>gi|197116415|ref|YP_002136842.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
gi|197085775|gb|ACH37046.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
Length = 358
Score = 43.7 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 73/219 (33%), Gaps = 38/219 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + C + C C R + S+++ + L I + S+ V+ +GG+
Sbjct: 7 PKWIAWETTQRCNLKCVHC-RCSSELTSSEGDFSTEEGKKLLKEISDFSKPV-VVLSGGE 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
PL+ L + +L + S + + E+ + +K+A +
Sbjct: 65 PLMRPDIFELAEYGTSLG-----LRMCMASNGSL-----VTDEVCEKMKKADIKMVSLSL 114
Query: 209 ----IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+H N P F E + A G L S K + +A+ +
Sbjct: 115 DGSTAEVHDNFRQCPGSF-EGVLRAAELFRKHGQKFLINSSFTKR---NQHDIASTFKVA 170
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L +Y+ + G+ I++ L K
Sbjct: 171 KSLGATAWYMFMI----------VPTGRGEDIMSELISK 199
>gi|319443027|ref|ZP_07992183.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
variabile DSM 44702]
Length = 371
Score = 43.3 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 15/180 (8%)
Query: 103 HVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C + C +C E M QK +L++++ + +V FTGG+PL+
Sbjct: 49 DKCNLRCTYCMPAEGMAWLQKDRLLTAEEAVRIADLGVRIFGVRDVRFTGGEPLVRHD-- 106
Query: 162 LQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
L ++ +R + H +I + + +D RI+ + L + E +
Sbjct: 107 LADIIAGVRRL-HPEIPISITTNGIGLDK-RIDDLVDAGLTRVNVSLDTVDR-EAFKELT 163
Query: 221 -----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
+ I + AG+ + +VL++GIND A+L+ V + ++
Sbjct: 164 RRDRLPQVIKGLEAAKAAGLEPVKVNAVLMRGINDTG--AADLLEWCVTRGYQLRFIEQM 221
>gi|78043007|ref|YP_359644.1| tungsten-containing aldehyde ferredoxin oxidoreductase cofactor
modifying protein [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995122|gb|ABB14021.1| tungsten-containing aldehyde ferredoxin oxidoreductase cofactor
modifying protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 365
Score = 43.3 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 73/216 (33%), Gaps = 47/216 (21%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
P I Y L+L +C + CR C+R S KG ++ K E L +
Sbjct: 13 EPQPDIQEIY-----LELSGLCNLNCRHCYRNSW--SYKGGLMERKTWEKVLEDAKALPL 65
Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ ++ G G+PL+ +++++ ++ + + + ++ + +
Sbjct: 66 LSRIVLGGIGEPLLHP--EIKEIITNIKAMG--LKVSITTNGFLL-----TEAMARDFVN 116
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS------QSVLLK--GINDDPEIL 254
G I F E A N G + + Q L+K + PEIL
Sbjct: 117 LGVDEIIV----SIDGFLPETFAE-----NRGADIGNLWSNLKQLNLIKQQNKSSQPEIL 167
Query: 255 ANLMR-------------TFVELRIKPYYLHHPDLA 277
A ++ +E IK Y+
Sbjct: 168 AEMVVNKRNSQEIFKLIPRLLEYNIKVLYVSQLMPV 203
>gi|317052447|ref|YP_004113563.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Desulfurispirillum indicum S5]
gi|316947531|gb|ADU67007.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Desulfurispirillum indicum S5]
Length = 236
Score = 43.3 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ H C + CR+C +V Q + L YI QI V TGG+P
Sbjct: 22 EIATTVFTHGCNLRCRYCHNPALVLGQ----PGRSRQDQLLEYIDRH-QIGAVAITGGEP 76
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
L + L+ +L+ LR + +R P R+ L Q L +
Sbjct: 77 LFQ--RELETLLQQLRS----RKIRIKLDTNGTLPHRLKQVLEQELVDF 119
>gi|258645469|ref|ZP_05732938.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM
15470]
gi|260402822|gb|EEW96369.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM
15470]
Length = 447
Score = 43.3 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 75/235 (31%), Gaps = 79/235 (33%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C YC FC + L S+ A+ I+ + EV+ TG
Sbjct: 152 KTRAFIKIQEGCDNYCTFC-----IIPFARGKLKSRRQSDAVEEIRRLVEKGYREVVLTG 206
Query: 152 -------GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
D L L ++ L I + +R S + ELI+ ++E
Sbjct: 207 IHLGNYGKD---LHDGTSLSTLVTELVRIPDLLRIRLGSIESVELS----DELIRIIREE 259
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
K + H + P AG +IL + R
Sbjct: 260 PK---VCPHLHLP--------------IQAG---------------SDDILKRMNR---- 283
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGGY 317
H+R + E ++++ +L+++I GL I+ PG
Sbjct: 284 ------------------HYR--LAEYKELIRNLRKEIPGLALTTDLIVGFPGET 318
>gi|210623865|ref|ZP_03294100.1| hypothetical protein CLOHIR_02051 [Clostridium hiranonis DSM 13275]
gi|210153291|gb|EEA84297.1| hypothetical protein CLOHIR_02051 [Clostridium hiranonis DSM 13275]
Length = 432
Score = 43.3 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 26/131 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+D + + ++ EV+ TG
Sbjct: 141 RTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDLDNIVEEVKLLASKGYKEVVLTG 195
Query: 152 -------GDPLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
D + K +L V+K + I ++ +R S V+P E ++ + +
Sbjct: 196 IHVASYGKD---IKDKEVKLLDVIKAVNEIDGIERIRTSS----VEPILFTDEFVEEISK 248
Query: 203 AGKPVYIAIHA 213
K + H
Sbjct: 249 MNK---VCPHF 256
>gi|73541963|ref|YP_296483.1| molybdenum cofactor biosynthesis protein A [Ralstonia eutropha
JMP134]
gi|72119376|gb|AAZ61639.1| GTP cyclohydrolase subunit MoaA [Ralstonia eutropha JMP134]
Length = 396
Score = 43.3 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 78/246 (31%), Gaps = 25/246 (10%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRR 115
IP + L P G+V R L + + C C +C +
Sbjct: 27 VIPIFD-LRDHRYRSMTPSIPETLVEPSGLVADTRARPLHDLRISVTDRCNFRCVYCMPK 85
Query: 116 EMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
E+ +LS ++ E + ++ TGG+PL+ + ++K+++ L
Sbjct: 86 EVFDKDYTFLPHSELLSFEEIERTARLFVS-LGVEKIRLTGGEPLLRKN--IEKLVEMLA 142
Query: 171 YIKHV--QILRFHSRVPIVDPQRINPELIQC-LKEAGKPV--YIAIHANHPYEFSEEAIA 225
I V + L R L L+ + + +
Sbjct: 143 RIDTVSGKPLDLTLTTNASLLARKAQSLRDAGLRRVSVSLDAIDDVTFRRMNDVDFAVAD 202
Query: 226 AISRL---ANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
+ + G + V+ +G ND + + R F I Y+ D ++
Sbjct: 203 VLHGIETAQAVGLAPIKVNMVVKRGTND--AEIVPMARHFRGSGIIVRYIEFMD-VGASN 259
Query: 282 HFRLTI 287
H+++
Sbjct: 260 HWQMDE 265
>gi|172060044|ref|YP_001807696.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MC40-6]
gi|171992561|gb|ACB63480.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MC40-6]
Length = 370
Score = 43.3 bits (101), Expect = 0.049, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R++ +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRDVFDKDYPFLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLARL 116
>gi|149635693|ref|XP_001506834.1| PREDICTED: similar to development and differentiation enhancing
factor 2 [Ornithorhynchus anatinus]
Length = 604
Score = 43.3 bits (101), Expect = 0.049, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y L C + C++C E V + K +L++ + + + +
Sbjct: 36 GRQHTYLRISL---TEKCNLRCQYCMPEEGVPLTPKADLLTTPEILRLARLFVQ-EGVDK 91
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ TGG+PLI ++ LR + ++ L +
Sbjct: 92 IRLTGGEPLIRPDVV--DIVAQLRQLPGLKTLAVTTNGL 128
>gi|115351039|ref|YP_772878.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
AMMD]
gi|115281027|gb|ABI86544.1| GTP cyclohydrolase subunit MoaA [Burkholderia ambifaria AMMD]
Length = 370
Score = 43.3 bits (101), Expect = 0.049, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R++ +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRDVFDKDYPFLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLARL 116
>gi|323526884|ref|YP_004229037.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1001]
gi|323383886|gb|ADX55977.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1001]
Length = 369
Score = 43.3 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +LS ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLARLFVAH-GVEKIRLTGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLSQL 116
>gi|160946408|ref|ZP_02093617.1| hypothetical protein PEPMIC_00368 [Parvimonas micra ATCC 33270]
gi|158447524|gb|EDP24519.1| hypothetical protein PEPMIC_00368 [Parvimonas micra ATCC 33270]
Length = 480
Score = 43.3 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 78/218 (35%), Gaps = 34/218 (15%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+I + L C CR CF + + G ++ + + + + V+ TGG+P
Sbjct: 123 TQIDMVLTTKCNFRCRHCFIKN---NSDGFTMNFLLWKRIIDKL-CNQGLTSVVVTGGEP 178
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L L K L + + + L H + + I+ I+ +++ V + + +
Sbjct: 179 L------LYKELTPILNYINDKKLNIH---LLTNGYLIDDNFIEEIRKFN-NVIVQVSLD 228
Query: 215 HPYEFS-----------EEAIAAISRLANAGI-----ILLSQSVLLKGINDDPEILANLM 258
+ + I +L ++GI ++L++ + N +L
Sbjct: 229 GSNSITQKYQRLIENSFDVVTKNIKKLTDSGIVVNVAMVLNKQNIYDLYNGSMF---DLC 285
Query: 259 RTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
V + + + + A L IEE K++
Sbjct: 286 EKLRVNMLAITPTVINIENAKTNKKMFLDIEEVIKMIE 323
>gi|14590060|ref|NP_142124.1| molybdenum cofactor biosynthesis protein A [Pyrococcus horikoshii
OT3]
gi|3256500|dbj|BAA29183.1| 316aa long hypothetical molybdenum cofactor biosynthesis protein
[Pyrococcus horikoshii OT3]
Length = 316
Score = 43.3 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 57/157 (36%), Gaps = 18/157 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C + C +C R + ++ ++ E + + + I +V TGG+P I
Sbjct: 23 LTKECNLSCFYCHREGQL--DGERFMTPEEIERIVR-VASRLGIKKVKLTGGEPTIRKD- 78
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKEAGKPVY-IAIHA 213
+ ++++ L+ +V L + + + + L + Y +
Sbjct: 79 -ILEIIRRLK--PYVVDLSLTTNGTTMYVLAEKLKEAGLDRVNISLDTLDRKKYKMITGF 135
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N E + A + V++KG+NDD
Sbjct: 136 NVLDEVIKGIKKATKLFY----PVKLNMVVMKGVNDD 168
>gi|323692405|ref|ZP_08106641.1| hypothetical protein HMPREF9475_01504 [Clostridium symbiosum
WAL-14673]
gi|323503545|gb|EGB19371.1| hypothetical protein HMPREF9475_01504 [Clostridium symbiosum
WAL-14673]
Length = 324
Score = 43.3 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 20/157 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C + +L+S++ A I + TGG+PL+ +
Sbjct: 18 VTDRCNLNCAYCRPENSPFLSRKALLTSEEILAFCRE-AAILGIRHIKITGGEPLLRTDC 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+++ L+ ++ + + ++ E + LKEAG I I + P
Sbjct: 77 C--SIVEKLKKTPGIETVTLTTNGLLL------SEHLGRLKEAGID-GINISMDTPDRAC 127
Query: 221 EEAIAAISRL----------ANAGIILLSQSVLLKGI 247
A+ RL A GI + V++ G+
Sbjct: 128 YAALTGSDRLPELLDSIRSTAGLGIPMKINCVIMDGL 164
>gi|238917088|ref|YP_002930605.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
gi|238872448|gb|ACR72158.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
Length = 446
Score = 43.3 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 24/129 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ E + ++ + + EV+ TG
Sbjct: 149 HTRAYIKIQDGCNQFCSYC-----IIPYVRGRVRSRKPEDIVNEVKTLAATGVKEVVLTG 203
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++++ + I+ ++ +R S ++P+ I E + +
Sbjct: 204 IHISSYGTD---LENISLIELIEAIHEIEGIKRIRLGS----LEPRIITEEFAKRIAGLE 256
Query: 205 KPVYIAIHA 213
K I H
Sbjct: 257 K---ICPHF 262
>gi|307594461|ref|YP_003900778.1| Radical SAM domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307549662|gb|ADN49727.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429]
Length = 413
Score = 43.3 bits (101), Expect = 0.051, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 27/188 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
I + + C + C C+ + G + + + E AL + + ++ +I +GG+P
Sbjct: 38 IFWNITYRCNLKCIHCYINAIQGLSRDELTT----EEALRVVDDAHELRTPLLIISGGEP 93
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
LI + +V++ ++I + + I + LKE Y+ I +
Sbjct: 94 LIRED--ITEVMRRANEYG-IKI-SLSTNGTL-----ITRDWALKLKELNVQ-YVGISID 143
Query: 215 HPY-EF----------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P E + AI I + GI + ++ + K D + L
Sbjct: 144 SPIPEIHDRIRGITGAWDLAIKGIKNVMEVGIPVGIRTTVTKLNIDHAPEVVELAHKLGI 203
Query: 264 LRIKPYYL 271
R+ Y+L
Sbjct: 204 SRVAFYHL 211
>gi|253698670|ref|YP_003019859.1| radical SAM protein [Geobacter sp. M21]
gi|251773520|gb|ACT16101.1| Radical SAM domain protein [Geobacter sp. M21]
Length = 358
Score = 43.3 bits (101), Expect = 0.051, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 73/219 (33%), Gaps = 38/219 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + C + C C R + S+++ + L I + S+ V+ +GG+
Sbjct: 7 PKWIAWETTQRCNLKCVHC-RCSSELTSSEGDFSTEEGKKLLKEISDFSKPV-VVLSGGE 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
PL+ L + +L + S + + E+ + +K+A +
Sbjct: 65 PLMRPDIFELAEYGTSLG-----LRMCMASNGSL-----VTDEVCEKMKKADIKMVSLSL 114
Query: 209 ----IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+H N P F E + A G L S K + +AN +
Sbjct: 115 DGSTAEVHDNFRQCPGSF-EGVLRAAELFRKHGQKFLINSSFTKR---NQHDIANTFKVA 170
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L +Y+ + G+ I++ L K
Sbjct: 171 KSLGATAWYMFMI----------VPTGRGEDIMSELISK 199
>gi|168187897|ref|ZP_02622532.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
gi|169294251|gb|EDS76384.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
Length = 444
Score = 43.3 bits (101), Expect = 0.052, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 17/130 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
+++ C C +C + + S+ E+ + + + E+I G
Sbjct: 144 KHMAYIRISEGCDNLCTYC-----IIPKIRGKYRSRSLESIINEAKELANMGVKELILVG 198
Query: 152 GD-PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + S +L +LK L I+ ++ +R P+ I ELI+ +K K
Sbjct: 199 QDTAIYGSDLYEENKLSTLLKELSNIEDIEWIRV----LYTYPEEITDELIEEIKNNDKV 254
Query: 207 V-YIAIHANH 215
Y+ I H
Sbjct: 255 CKYLDIPIQH 264
>gi|327535035|gb|AEA93869.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
OG1RF]
Length = 321
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 10 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 69 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 98
>gi|294780074|ref|ZP_06745450.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
PC1.1]
gi|294452826|gb|EFG21252.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
PC1.1]
gi|323480628|gb|ADX80067.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
62]
Length = 321
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 10 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 69 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 98
>gi|257416003|ref|ZP_05592997.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
AR01/DG]
gi|257157831|gb|EEU87791.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
ARO1/DG]
Length = 324
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|257089787|ref|ZP_05584148.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis
CH188]
gi|256998599|gb|EEU85119.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis
CH188]
Length = 324
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|257086842|ref|ZP_05581203.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
D6]
gi|256994872|gb|EEU82174.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
D6]
Length = 324
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|257085347|ref|ZP_05579708.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Fly1]
gi|256993377|gb|EEU80679.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Fly1]
Length = 324
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|257082638|ref|ZP_05576999.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
E1Sol]
gi|256990668|gb|EEU77970.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
E1Sol]
Length = 324
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|256962021|ref|ZP_05566192.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Merz96]
gi|256952517|gb|EEU69149.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Merz96]
Length = 324
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|256958884|ref|ZP_05563055.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
DS5]
gi|257078915|ref|ZP_05573276.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
JH1]
gi|256949380|gb|EEU66012.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
DS5]
gi|256986945|gb|EEU74247.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
JH1]
Length = 324
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|256618973|ref|ZP_05475819.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
ATCC 4200]
gi|256762400|ref|ZP_05502980.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T3]
gi|256598500|gb|EEU17676.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
ATCC 4200]
gi|256683651|gb|EEU23346.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T3]
Length = 324
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|255975948|ref|ZP_05426534.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T2]
gi|255968820|gb|EET99442.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T2]
Length = 324
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|255972893|ref|ZP_05423479.1| predicted protein [Enterococcus faecalis T1]
gi|257422717|ref|ZP_05599707.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|255963911|gb|EET96387.1| predicted protein [Enterococcus faecalis T1]
gi|257164541|gb|EEU94501.1| conserved hypothetical protein [Enterococcus faecalis X98]
Length = 324
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|237714068|ref|ZP_04544549.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D1]
gi|262407119|ref|ZP_06083668.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 2_1_22]
gi|294644009|ref|ZP_06721789.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides ovatus SD CC 2a]
gi|294810385|ref|ZP_06769043.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides xylanisolvens SD CC 1b]
gi|229445892|gb|EEO51683.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D1]
gi|262355822|gb|EEZ04913.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 2_1_22]
gi|292640646|gb|EFF58884.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides ovatus SD CC 2a]
gi|294442412|gb|EFG11221.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides xylanisolvens SD CC 1b]
Length = 152
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 24/65 (36%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L C +C C E G L+ + ++ + I+ + V F+GGDP
Sbjct: 19 YSIYLAGCSHHCPGCHNPESWNPGAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFH 78
Query: 158 SHKRL 162
L
Sbjct: 79 PEAFL 83
>gi|229545922|ref|ZP_04434647.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis TX1322]
gi|256853030|ref|ZP_05558400.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|229308990|gb|EEN74977.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis TX1322]
gi|256711489|gb|EEU26527.1| conserved hypothetical protein [Enterococcus faecalis T8]
Length = 324
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 13 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 72 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 101
>gi|229550115|ref|ZP_04438840.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis ATCC 29200]
gi|229304819|gb|EEN70815.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis ATCC 29200]
Length = 321
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L L C + C +C + +K +L+ + L I K I +V TGG+
Sbjct: 10 DYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTGGE 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
PL+ + L ++K ++ I ++ + +
Sbjct: 69 PLVRPN--LLSLIKRIKQISGIEKVTLTTNGM 98
>gi|268317762|ref|YP_003291481.1| molybdenum cofactor biosynthesis protein A [Rhodothermus marinus
DSM 4252]
gi|262335296|gb|ACY49093.1| molybdenum cofactor biosynthesis protein A [Rhodothermus marinus
DSM 4252]
Length = 363
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAA 134
DP G R+ + + H C + CR+C E + + +L+ ++
Sbjct: 31 DPARSEADVLTDGFGRRHTYLRISLIEH-CNLRCRYCMPEEGLDWTPPEHLLTDEEIIRL 89
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ ++ TGG+PL+ K +++++ L + ++ L +
Sbjct: 90 ARLFVS-QGVTKIRLTGGEPLLR--KGIERIVAELARLPGLRALAMTTNGL 137
>gi|226954112|ref|ZP_03824576.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ATCC
27244]
gi|226835153|gb|EEH67536.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ATCC
27244]
Length = 343
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 79/232 (34%), Gaps = 20/232 (8%)
Query: 80 DNNHSPLKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
+ + L + +Y ++ + + C C +C +K +LS +
Sbjct: 5 EIPETNLPILQDQYARIKRKLRISVTDRCNFKCVYCMPEHPEWMKKQDLLSFEALFLFCQ 64
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIV------D 188
Y+ I + TGG+PL+ + + + L+ + + ++ + + +
Sbjct: 65 YMVS-QGIENIRITGGEPLMR--QGVVHFIAELQALRAEGLKRISITTNAHYLTKYAQQL 121
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
+L L + ++ E + +A I A + VL+KG N
Sbjct: 122 KNAGLDDLNISLDSLDPTQFKSLT---KKELAP-VLAGIEAAKQAQLPFKINCVLMKGQN 177
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
DD + ++ ++ D S + + E +I+ LK
Sbjct: 178 DDQIVPMVKWAKQQDIPLRFIEFMPLDGDQHWSQQAV-VSEA-EILEQLKAH 227
>gi|206559374|ref|YP_002230135.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia J2315]
gi|206561224|ref|YP_002231989.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia J2315]
gi|198035412|emb|CAR51288.1| molybdenum cofactor biosynthesis protein A 2 [Burkholderia
cenocepacia J2315]
gi|198037266|emb|CAR53188.1| molybdenum cofactor biosynthesis protein A 1 [Burkholderia
cenocepacia J2315]
Length = 370
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLARL 116
>gi|161522430|ref|YP_001585359.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
gi|160345983|gb|ABX19067.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
Length = 408
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 26/157 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C RE+ GS + + A L I + ++ TGG+PL+
Sbjct: 82 VIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEPLL 141
Query: 157 LSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ L+ +++ L + V L + ++ + L++AG
Sbjct: 142 R--RHLETLIERLAALTTVDGRPVELALTTNGALLAAKART------LRDAGLTRVTV-- 191
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
A R+++A + + S +L GI
Sbjct: 192 -----SLDALDDAVFRRMSDADVPV---SRVLAGIEA 220
>gi|170732420|ref|YP_001764367.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia MC0-3]
gi|254245935|ref|ZP_04939256.1| Radical SAM:Molybdenum cofactor synthesis C [Burkholderia
cenocepacia PC184]
gi|124870711|gb|EAY62427.1| Radical SAM:Molybdenum cofactor synthesis C [Burkholderia
cenocepacia PC184]
gi|169815662|gb|ACA90245.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia MC0-3]
Length = 370
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLARL 116
>gi|78065694|ref|YP_368463.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. 383]
gi|77966439|gb|ABB07819.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383]
Length = 370
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLARL 116
>gi|107022186|ref|YP_620513.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia AU 1054]
gi|116689132|ref|YP_834755.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia HI2424]
gi|105892375|gb|ABF75540.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia AU 1054]
gi|116647221|gb|ABK07862.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia HI2424]
Length = 370
Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLARL 116
>gi|217979746|ref|YP_002363893.1| nitrogenase cofactor biosynthesis protein NifB [Methylocella
silvestris BL2]
gi|217505122|gb|ACK52531.1| nitrogenase cofactor biosynthesis protein NifB [Methylocella
silvestris BL2]
Length = 519
Score = 43.3 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 59/213 (27%), Gaps = 26/213 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + + LA Q+
Sbjct: 70 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAAKKVLAVASTIPQM 129
Query: 145 WEVIFTG-GDPL---------------ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ G GDPL +L L HV + + +
Sbjct: 130 TVLGIAGPGDPLANPEKTFKTFELISRTAPDIKLCLSTNGLALPDHVDTIAKFNVDHVTI 189
Query: 189 PQRINPELI--QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ I + ++ + + L GI+ SV++ G
Sbjct: 190 TINMTDPEIGAKIYPWIFWKHKRITGYEAAKILTDRQLQGLEMLTERGILCKINSVMIPG 249
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ND + R + + A
Sbjct: 250 VNDKHLVEV--NRAVKSRGAFLHNIMPLISAPE 280
>gi|167518722|ref|XP_001743701.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777663|gb|EDQ91279.1| predicted protein [Monosiga brevicollis MX1]
Length = 353
Score = 43.3 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 46/114 (40%), Gaps = 5/114 (4%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
H+ G+V R+ L C + C++C + + L S +
Sbjct: 18 FSASRQHAVHAGLVDRFQRSHDYLRISLTERCNLRCQYCMPEDGIKLTASERLISFEERQ 77
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
LA + + + + TGG+PL+ RL +V+++L+ + + + + +
Sbjct: 78 QLAALFGRMGVTKFRLTGGEPLVYP--RLVEVVESLKALPNTTEVNMTTNGVTL 129
>gi|332140865|ref|YP_004426603.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550887|gb|AEA97605.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii
str. 'Deep ecotype']
Length = 322
Score = 43.3 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 55/161 (34%), Gaps = 22/161 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C++C G +S + + L + +V TGG+P L
Sbjct: 17 VTEACNFRCQYCLPDGYEGPSSDQFMSLNEIDTLLKAFAK-LGTSKVRLTGGEP-TLRRD 74
Query: 161 RLQKVLKTLRYIKHVQILRFHS---RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
L +L ++ + + R+ Q + L V ++I + P
Sbjct: 75 FLD-ILHLTSNTPGIKRVAMTTHGARMEKFAHQWKDAGL--------HQVNVSIDSLDPR 125
Query: 218 EFSE--------EAIAAISRLANAGIILLSQSVLLKGINDD 250
+F+ + + +AG+ + SVLL +D
Sbjct: 126 QFAAITGQDKLKAVLRGLDSAIDAGLDVKVNSVLLNDFSDS 166
>gi|298479623|ref|ZP_06997823.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D22]
gi|298274013|gb|EFI15574.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D22]
Length = 152
Score = 43.3 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 24/65 (36%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L C +C C E G L+ + ++ + I+ + V F+GGDP
Sbjct: 19 FSIYLAGCSHHCPGCHNPESWNPGVGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFH 78
Query: 158 SHKRL 162
L
Sbjct: 79 PEAFL 83
>gi|182414976|ref|YP_001820042.1| radical SAM domain-containing protein [Opitutus terrae PB90-1]
gi|177842190|gb|ACB76442.1| Radical SAM domain protein [Opitutus terrae PB90-1]
Length = 351
Score = 43.3 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 10/107 (9%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVG------SQKGTVLSSKDTEAALAYIQEKSQIWE 146
+P + + + C + C C + G ++G L+++D I
Sbjct: 5 FPAFVSFTVTNACNLRCAMCGQWSPAGYIRSGRGRRGHPLTAEDWMRLADEAAAH-GIKS 63
Query: 147 VIFTGGDPLILS-HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
++ GG+P +L +RL + L L + +R+ + +
Sbjct: 64 ILLRGGEPFMLPGIQRLLEHLHDLGMFISIDTN--GTRLAAFAEELV 108
>gi|327262583|ref|XP_003216103.1| PREDICTED: molybdenum cofactor biosynthesis protein 1-like [Anolis
carolinensis]
Length = 560
Score = 43.3 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 33/150 (22%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLK-------------------GIVHRYPD 95
P+ +Q P+ P+ +P + G H Y
Sbjct: 35 PVRQQ---------QHPQAVAAPVAQEFTNPRRKGFLSEHAAPFSAFLTDGFGRQHNYLR 85
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
L C + C++C E V + L S LA + K + ++ TGG+PL
Sbjct: 86 ISL---TEKCNLRCQYCMPEEGVQLTPKSELLSTQEIITLAGLFVKEGVDKIRLTGGEPL 142
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
I ++ +R ++ ++ + +
Sbjct: 143 IRPDVV--DIIAQMRKLEGLETIAVTTNGI 170
>gi|227500638|ref|ZP_03930687.1| thiamine biosynthesis protein ThiH [Anaerococcus tetradius ATCC
35098]
gi|227217225|gb|EEI82569.1| thiamine biosynthesis protein ThiH [Anaerococcus tetradius ATCC
35098]
Length = 472
Score = 43.3 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 53/138 (38%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L +E+ + + + + + H+ Y +RI+L + C C +C
Sbjct: 51 SHREAFVLLSCKEEDLNEEIFNLARELKHKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ L+ + + +Q+ + G DP+ + + + + T+ IKH
Sbjct: 111 NKTIPRRKLTQDEIREQVIALQDLGHKRLALEAGEDPIHNPLEYILESIHTIYNIKHKNG 170
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 171 AIRRVNVNIAATTVENYR 188
>gi|160900317|ref|YP_001565899.1| molybdenum cofactor biosynthesis protein A [Delftia acidovorans
SPH-1]
gi|160365901|gb|ABX37514.1| molybdenum cofactor biosynthesis protein A [Delftia acidovorans
SPH-1]
Length = 378
Score = 43.3 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 97/302 (32%), Gaps = 57/302 (18%)
Query: 60 FIPQKEELNIL-----PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
IP +E P + P GD + + + + + C C +C
Sbjct: 5 VIPLVDERAPTRPAAVPSLLQTPTGDLQDRLGRSL-----RDLRISITDRCNFRCSYCMP 59
Query: 115 REMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+E+ G++LS ++ + + ++ TGG+PL+ + ++ +++ L
Sbjct: 60 KEVFDKNYSYLPHGSLLSFEEITRTARLFVQH-GVQKIRLTGGEPLLRKN--VETLVEQL 116
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN----HPYEFSEEAIA 225
+ R P P + L N +
Sbjct: 117 SAL----------RTPGGQPLDLTLTTNGSLLARKARALKDAGLNRVTVSLDGLDDAVFR 166
Query: 226 AISRL--------------ANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+++ + AG+ + V+ +G N+D + + R F + +
Sbjct: 167 SMNDVDFPVSDVLAGIEAAQAAGLTNIKVNMVVKRGTNEDQ--ILPMARHFQGTGVTLRF 224
Query: 271 LHHPDLAAGTSHFRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
+ + D T+ +R+ +++A L+ ++ + P G+ +
Sbjct: 225 IEYMD-VGATNGWRMDEVLPSDEVIARLRAELP------LVPLQPSATGETAVRWGYADA 277
Query: 330 VG 331
G
Sbjct: 278 RG 279
>gi|317489950|ref|ZP_07948442.1| molybdenum cofactor biosynthesis protein A [Eggerthella sp.
1_3_56FAA]
gi|316910948|gb|EFV32565.1| molybdenum cofactor biosynthesis protein A [Eggerthella sp.
1_3_56FAA]
Length = 333
Score = 43.3 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 81/229 (35%), Gaps = 36/229 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C C +C E V S +L ++ E A+ + I + TGG+PL+
Sbjct: 16 LTDRCNFRCIYCMPEEGVQSLAHEDILRIEEIEEAVR-VAAGMGIRSIRLTGGEPLV--- 71
Query: 160 KRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKE---AGKPVYIAI-- 211
RL V+ +R I H ++ + + ++ P++ LKE + + +
Sbjct: 72 -RLG-VVDLVRAIAHTPGIENVSMTTNGVLL------PKMAADLKEAGLSRVNISLDTLD 123
Query: 212 -----HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELR 265
E ++ + I AG + +V ++ ++ D A L
Sbjct: 124 PAQFRQITRRGEL-QQTLDGIDAALAAGFNPVKINAVAVRSLDQDYLAFAKLSIDRPLHV 182
Query: 266 IKPYYLHHPDLAAGT-----SHFRLTIEEGQKIVASLKEKISGL--CQP 307
Y+ + + + EE +I+ + + +G+ P
Sbjct: 183 RFIEYMPVGESSGSHGCGWGKDDVVPSEELFEIINE-RARAAGMDELVP 230
>gi|260893119|ref|YP_003239216.1| Radical SAM domain protein [Ammonifex degensii KC4]
gi|260865260|gb|ACX52366.1| Radical SAM domain protein [Ammonifex degensii KC4]
Length = 330
Score = 43.3 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 70/208 (33%), Gaps = 37/208 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + + C + C C+R G++K L + + +A + I + +IF+GG+P++
Sbjct: 3 ISWNVTNACNLKCEHCYRDA--GTKKEAELVTSEGKALIEEIAR-AGFKIMIFSGGEPIL 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L ++ R + + + I E+ + LK+AG V
Sbjct: 60 RPD--LYSLIAHARSLG--LRPVLGTNGTL-----ITREVARELKKAGLAVAGI----SL 106
Query: 217 YEFSE--------------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
A+ + G+ + ++ ++ E + + V
Sbjct: 107 DSLDPQKHDRLRGVPGSWEAAVKGMEACREEGLPFQIHTTVMDFNYEEVEEITDFA---V 163
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ + +++ + + E
Sbjct: 164 AMGARGHHVFFLVPTGRA----VNLAEA 187
>gi|169830805|ref|YP_001716787.1| molybdenum cofactor biosynthesis protein A [Candidatus Desulforudis
audaxviator MP104C]
gi|169637649|gb|ACA59155.1| molybdenum cofactor biosynthesis protein A [Candidatus Desulforudis
audaxviator MP104C]
Length = 327
Score = 43.3 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 24/162 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLILS 158
L C + C +C E + E+ + I+ + I ++ TGG+PL+
Sbjct: 19 LTERCNLNCFYCRPGEQKTPTVDGLP----LESLMRVIRAGARVGIRKIRLTGGEPLVRP 74
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPELIQCLKEAGKPVY 208
V+ L I + + + ++ P +R+N L L+
Sbjct: 75 DVI--PVVAALNEIPQIDDIALTTNGSLLAPRAQGLRAAGLKRVNISL-DTLRPDRFR-- 129
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
E S + LA + V+++GINDD
Sbjct: 130 ---SITRNGELSAVMNGLEAALAQDLHPVKLNMVVMRGINDD 168
>gi|18976462|ref|NP_577819.1| molybdenum cofactor biosynthesis protein A [Pyrococcus furiosus DSM
3638]
gi|24211985|sp|Q8U4J5|MOAA_PYRFU RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|18892001|gb|AAL80214.1| molybdenum cofactor biosynthesis protein [Pyrococcus furiosus DSM
3638]
Length = 307
Score = 43.3 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 16/156 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C + C +C R ++ ++ E + I + I V TGG+P +
Sbjct: 17 LTKECNLNCFYCHREGQ--QDGERTMTPEEIERIVR-IASRLGIRNVKLTGGEPTVRPD- 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKEAGKPVYIAIHAN 214
+ ++++ +R +V L + + + + L + Y I
Sbjct: 73 -IYEIIQRIR--PYVVDLSMTTNGTTLYASAEKLKEAGLDRVNISLDTLDRKKYKMITG- 128
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Y+ ++ + I R N + V+++GINDD
Sbjct: 129 --YDVLDQVLKGIRRATNLFYPVKLNMVVMRGINDD 162
>gi|257791940|ref|YP_003182546.1| molybdenum cofactor biosynthesis protein A [Eggerthella lenta DSM
2243]
gi|257475837|gb|ACV56157.1| molybdenum cofactor biosynthesis protein A [Eggerthella lenta DSM
2243]
Length = 333
Score = 43.3 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 81/229 (35%), Gaps = 36/229 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C C +C E V S +L ++ E A+ + I + TGG+PL+
Sbjct: 16 LTDRCNFRCIYCMPEEGVQSLAHEDILRIEEIEEAVR-VAAGMGIRSIRLTGGEPLV--- 71
Query: 160 KRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKE---AGKPVYIAI-- 211
RL V+ +R I H ++ + + ++ P++ LKE + + +
Sbjct: 72 -RLG-VVDLVRAIAHTPGIENVSMTTNGVLL------PKMAVDLKEAGLSRVNISLDTLD 123
Query: 212 -----HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELR 265
E ++ + I AG + +V ++ ++ D A L
Sbjct: 124 PAQFRQITRRGEL-QQTLDGIDAALAAGFNPVKINAVAVRSLDQDYLAFAKLSIDRPLHV 182
Query: 266 IKPYYLHHPDLAAGT-----SHFRLTIEEGQKIVASLKEKISGL--CQP 307
Y+ + + + EE +I+ + + +G+ P
Sbjct: 183 RFIEYMPVGESSGSHGCGWGKDDVVPSEELFEIINE-RARAAGMDELVP 230
>gi|120611327|ref|YP_971005.1| molybdenum cofactor biosynthesis protein A [Acidovorax citrulli
AAC00-1]
gi|120589791|gb|ABM33231.1| GTP cyclohydrolase subunit MoaA [Acidovorax citrulli AAC00-1]
Length = 386
Score = 43.3 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 81/233 (34%), Gaps = 27/233 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G G +LS ++ + ++ TGG+PL
Sbjct: 53 VTDRCNFRCSYCMPKEVFGKDYPYLSHGDLLSFEEITRLARVFLAH-GVRKIRLTGGEPL 111
Query: 156 ILSHKRLQKVLKTLR-------YIKHVQILRFHSRVPIVDPQRINPELIQC-LKEAGKPV 207
+ + L+ +++ L + + + S + + L + +
Sbjct: 112 LR--RHLENLVEQLAGLRTAEGRVPDLTLTTNGSLLARKARALRDAGLARLTVSLDSLQD 169
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ N E ++ I AG + V+ +G ND + + R F I
Sbjct: 170 SVFRRMNDVDFPVAEVLSGIEAAQAAGFERIKVNMVVKRGTND--HEIVPMARHFRGTGI 227
Query: 267 KPYYLHHPDLAAGTSHFRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYG 318
++ + D T+ +R+ +++ L++++ + P G
Sbjct: 228 TLRFIEYMD-VGATNGWRMDEVLPSAQVIDRLRQELP------LVQLPPAAPG 273
>gi|91784732|ref|YP_559938.1| molybdenum cofactor biosynthesis protein A [Burkholderia xenovorans
LB400]
gi|91688686|gb|ABE31886.1| GTP cyclohydrolase subunit MoaA [Burkholderia xenovorans LB400]
Length = 369
Score = 43.3 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +LS ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRAVFDKDYTFLPHSALLSFEEIERLARIFVAH-GVEKIRLTGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ ++ L +
Sbjct: 102 LRKN--LEFLIDRLARL 116
>gi|325847803|ref|ZP_08170025.1| tRNA methylthiotransferase YqeV [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480821|gb|EGC83874.1| tRNA methylthiotransferase YqeV [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 432
Score = 43.3 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 20/120 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT-- 150
R +K+ C +YC +C ++S+D + + + + E++ T
Sbjct: 142 TRAYIKIQDGCNMYCSYCL-----IPYARGNIASRDLVSIIDEAKRLRDNGFKEIVLTGI 196
Query: 151 -----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L L+ + V++ + I ++ +R S ++P+ I+ E +Q +K+ K
Sbjct: 197 HVASYGKD-LDLNISLID-VIEHISKIDGIERIRLSS----MEPRHIDREFLQRMKDTKK 250
>gi|195378068|ref|XP_002047809.1| GJ13645 [Drosophila virilis]
gi|194154967|gb|EDW70151.1| GJ13645 [Drosophila virilis]
Length = 384
Score = 43.3 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGT 124
E P E P + G H Y L C + C +C E V K
Sbjct: 48 ENENKPMEASVP-----QTDSFGRHHTYLRISL---TERCNLRCEYCMPAEGVPLQPKAQ 99
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+LS+++ I + + ++ TGG+P + + +++ L+ + ++ + +
Sbjct: 100 LLSTEEVLRLAR-IFVEQGVRKIRLTGGEPTVRRD--IVEIVAQLKALPQLEHVGITTNG 156
Query: 185 PIV 187
++
Sbjct: 157 LVL 159
>gi|117924506|ref|YP_865123.1| nitrogenase cofactor biosynthesis protein NifB [Magnetococcus sp.
MC-1]
gi|117608262|gb|ABK43717.1| nitrogenase cofactor biosynthesis protein NifB [Magnetococcus sp.
MC-1]
Length = 464
Score = 43.3 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 59/182 (32%), Gaps = 30/182 (16%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKD 130
P D + K H+Y R+ L + C + C +C R+ G + +
Sbjct: 12 PSVDTHPCFSKDAHHKYA-RMHLAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPQQA 70
Query: 131 TEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
E A + Q+ V G GDPL + + + +Q+ + P
Sbjct: 71 VEKVRAVKAKIPQLTVVGIAGPGDPLANPARTFETCERIAAEFPELQLC-LSTNGLT-LP 128
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI--------SRLA---NAGIILL 238
Q + E I+ L + I E A + R+ A I++
Sbjct: 129 QHV--ERIKALNVHHVTITINA-------LDPEVGAKVYPWIFHNNRRIRGKKAAAILIR 179
Query: 239 SQ 240
+Q
Sbjct: 180 NQ 181
>gi|27376870|ref|NP_768399.1| FeMo cofactor biosynthesis protein [Bradyrhizobium japonicum USDA
110]
gi|30179738|sp|P06770|NIFB_BRAJA RecName: Full=FeMo cofactor biosynthesis protein nifB
gi|12620468|gb|AAG60744.1|AF322012_49 NifB [Bradyrhizobium japonicum]
gi|27350012|dbj|BAC47024.1| FeMo cofactor biosynthesis protein [Bradyrhizobium japonicum USDA
110]
Length = 499
Score = 43.3 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 64/216 (29%), Gaps = 32/216 (14%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + +A Q+
Sbjct: 49 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAVRKVIAVATTIPQM 108
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI------------VDPQR 191
+ G GD L K + + +++ + VD
Sbjct: 109 TVLGIAGPGDALANPAKTFKTLALVTEAAPDIKLC-LSTNGLALPDYVDTIVRAKVDHVT 167
Query: 192 INPELIQCLKEAGKPVYIAIHANH--------PYEFSEEAIAAISRLANAGIILLSQSVL 243
I ++ E G +Y I NH + + + L+ GI+ SV+
Sbjct: 168 ITINMVD--PEIGAKIYPWIFFNHKRYTGIEAARILTNRQLQGLEMLSERGILCKINSVM 225
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ INDD + + + +
Sbjct: 226 IPNINDDHLVEV--NKAVTSRGAFLHNIMPLISVPE 259
>gi|325522592|gb|EGD01129.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. TJI49]
Length = 263
Score = 43.3 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 81/220 (36%), Gaps = 36/220 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C R G+ + SS+ A L I + + TGG+PL+
Sbjct: 48 VIDQCNFRCGYCMPRASFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKFRITGGEPLL 107
Query: 157 LSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLKE 202
+ L+++++ L + V + + ++ R+ L L +
Sbjct: 108 R--RHLERLIERLATLTTVDGRPVEIALTTNGSLLADKARTLRDAGLSRVTVSL-DALDD 164
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTF 261
A + +A I AG + +V+ +G NDD + L+R F
Sbjct: 165 AVFRRMSDADVSVSR-----VLAGIEAAQAAGLAPVKVNAVIERGANDDQ--ILPLVRHF 217
Query: 262 VELRIKPYYLHHPDLAAGTSHFR-----LTIEEGQKIVAS 296
+ + ++ + D+ G +H + ++++ +
Sbjct: 218 RDTGVAVRFIEYMDV--GGAHLWSRDKVVPAARMRELIEA 255
>gi|218887985|ref|YP_002437306.1| radical SAM protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758939|gb|ACL09838.1| Radical SAM domain protein [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 359
Score = 43.3 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 28/197 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I ++ C + C+ C G S+++ +A + + +IFTGGDP++
Sbjct: 15 IAWEVTRSCNLACKHCRAEAHEEPYPGE-FSTEEAKALIDTFPQVGNPI-IIFTGGDPMM 72
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L L + I PE + +KEAG +I +
Sbjct: 73 RADVYELIAYATGLG-----LRCVMSPNGTL-----ITPETARKMKEAGVQ-RCSISIDG 121
Query: 216 PYEFS-----------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
P S + ++ I L AGI + + + + + L +
Sbjct: 122 PDAASHDAFRGVPGAFDASLRGIEYLKQAGIEFQINTTVTRDNLGSFKDIFKLCE---RI 178
Query: 265 RIKPYYLHHPDLAAGTS 281
+++ +
Sbjct: 179 GAAAWHIFLLVPTGRAA 195
>gi|148264465|ref|YP_001231171.1| molybdenum cofactor biosynthesis protein A [Geobacter
uraniireducens Rf4]
gi|146397965|gb|ABQ26598.1| GTP cyclohydrolase subunit MoaA [Geobacter uraniireducens Rf4]
Length = 326
Score = 43.3 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 31/180 (17%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++ Y RI + C + C +C E + Q G +LS +D I
Sbjct: 3 LIDSYGRRINYLRLSVTDRCNLRCSYCMPAEGIPKLQHGEMLSYEDLYRVACE-SVALGI 61
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
++ TGG+PL+ K L + + L I ++ L + ++ EL L++AG
Sbjct: 62 EKIRVTGGEPLVR--KGLVQFIGRLADIPGLKELVLTTNGLLL------GELAIPLRQAG 113
Query: 205 KPVYIAIHANHPYEFSEEAIAAISR---LAN----------AGI-ILLSQSVLLKGINDD 250
+ I E A I+R L AG + V++KGINDD
Sbjct: 114 AQ-RLNISL---DSLKPETFARITRGGDLRKVVDGIAAAEEAGFPPVKINMVVMKGINDD 169
>gi|323141180|ref|ZP_08076081.1| molybdenum cofactor biosynthesis protein A [Phascolarctobacterium
sp. YIT 12067]
gi|322414323|gb|EFY05141.1| molybdenum cofactor biosynthesis protein A [Phascolarctobacterium
sp. YIT 12067]
Length = 318
Score = 43.3 bits (101), Expect = 0.061, Method: Composition-based stats.
Identities = 42/249 (16%), Positives = 78/249 (31%), Gaps = 39/249 (15%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+Y +I L C ++CR+C +L ++ + I +
Sbjct: 4 QYNRKIDYLRISLTDRCNLHCRYCQPEVSEHVTHNEILRYEELLRICR-AALQLGIRKFK 62
Query: 149 FTGGDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCLKE 202
TGG+PL+ S LK L + V + + + P I + L
Sbjct: 63 ITGGEPLLRKGCSD--FIANLKQLEGAEQVTLTTNGTLLSNQLPALIAAGVDSINVSLDT 120
Query: 203 AGKPVYIAIHANHPYEFS----EEAIAAISRLANAGIIL-LSQSVLLKGINDDPEILANL 257
Y E + + + A+ L +AGI L+ L + D L L
Sbjct: 121 LDAAYY--------TELTGGSLDSVLQALQELQSAGIPFKLNCVPLAENGPADIMQLLKL 172
Query: 258 MRT----FVELRIKPYYLH-HPDLAAGTSHFRLTIEEGQKIVASLKE---------KISG 303
+ + P + + +G L + G ++ + +ISG
Sbjct: 173 AHRYNAPLRFIELMPLDCNANLRGVSGNEIRSLLEQAGLQLQPDAQRYGNGPASYWRISG 232
Query: 304 LCQPFYILD 312
P ++
Sbjct: 233 YAMPVGFIE 241
>gi|209521138|ref|ZP_03269865.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. H160]
gi|209498413|gb|EDZ98541.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. H160]
Length = 382
Score = 43.3 bits (101), Expect = 0.061, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +LS ++ E + ++ TGG+PL
Sbjct: 56 VTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLAQLFVAH-GVEKIRLTGGEPL 114
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 115 LRKN--LEFLIERLARL 129
>gi|197303727|ref|ZP_03168764.1| hypothetical protein RUMLAC_02456 [Ruminococcus lactaris ATCC
29176]
gi|197297247|gb|EDY31810.1| hypothetical protein RUMLAC_02456 [Ruminococcus lactaris ATCC
29176]
Length = 438
Score = 43.3 bits (101), Expect = 0.061, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 21/128 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C G + S +D + + E EV+ TG
Sbjct: 150 HTRAYIKVQDGCNQFCTYCIIPYARGRVRSR--SMEDVTEEVRTLAENGY-KEVVLTG-- 204
Query: 154 PLILS--------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ LS + L +++ + I+ ++ +R S ++P I E + + + K
Sbjct: 205 -IHLSSYGIDFDKERHLLDLIRAVHQIEGIERIRLGS----LEPGIITEEFAEAISKLPK 259
Query: 206 PVYIAIHA 213
+ H
Sbjct: 260 ---MCPHF 264
>gi|149200218|ref|ZP_01877240.1| molybdenum cofactor biosynthesis protein A [Lentisphaera araneosa
HTCC2155]
gi|149136660|gb|EDM25091.1| molybdenum cofactor biosynthesis protein A [Lentisphaera araneosa
HTCC2155]
Length = 335
Score = 43.3 bits (101), Expect = 0.061, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Query: 101 LLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
++ C C +C R + + ++ L+ I + + + TGG+PL+
Sbjct: 18 VIDACNFRCLYCMPPDRDYDFFKKNEMLSVNEAIR--LSEIFVQLGVRRIRLTGGEPLLR 75
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L +++ + I ++ L +
Sbjct: 76 KD--LDQIIAGIAKIPELEDLAITTNAS 101
>gi|301106560|ref|XP_002902363.1| molybdenum cofactor biosynthesis protein 1 A [Phytophthora
infestans T30-4]
gi|262098983|gb|EEY57035.1| molybdenum cofactor biosynthesis protein 1 A [Phytophthora
infestans T30-4]
Length = 301
Score = 43.3 bits (101), Expect = 0.062, Method: Composition-based stats.
Identities = 24/192 (12%), Positives = 57/192 (29%), Gaps = 23/192 (11%)
Query: 120 SQKGTVLSSKDTEAALAYIQ-----EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ +++ L I+ S I + TGG+PL+ L +++ LR I
Sbjct: 3 EDGVPLQPTENLMTTLEIIRLAKVFASSGITRIRLTGGEPLLRRD--LAELVAQLRAIPG 60
Query: 175 VQILRFHSRVPIVDPQRIN------PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
++ + + + + + L L + H F ++
Sbjct: 61 IESVGITTNGITLQKKLLTLQQAGVDRLNISLDTLKPDRF--AHITRRQGF----ARVMN 114
Query: 229 RLANAGI----ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
+ A L V+ + N D + + ++ D
Sbjct: 115 SILEAQALGFSPLKINCVVQRHFNLDEIVAFVAFTQQHAVDVRFIEWMPFDSNRWNDETF 174
Query: 285 LTIEEGQKIVAS 296
+ +E ++ +
Sbjct: 175 VPFKEMMGLIQA 186
>gi|311742547|ref|ZP_07716356.1| molybdenum cofactor biosynthesis protein A [Aeromicrobium marinum
DSM 15272]
gi|311314175|gb|EFQ84083.1| molybdenum cofactor biosynthesis protein A [Aeromicrobium marinum
DSM 15272]
Length = 328
Score = 43.0 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 60/179 (33%), Gaps = 19/179 (10%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C++C E + L+ + +A E+ + +V FTGG+PL+
Sbjct: 18 LTDRCNLRCQYCMPAEGLDWMPTEETLTDDELNRLIAIAVERLGVTDVRFTGGEPLLR-- 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE- 218
+ L ++ + S + + + + +E
Sbjct: 76 RSLPSIIAATAALPSRPRTAITSNGLGLKH---TARALADAGLNRVNISLDTIDAAIFEQ 132
Query: 219 FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
+ + +A + AG+ + +VLL+ +ND + ++ Y
Sbjct: 133 ITRRNRLHDVMAGLEAAREAGLSPVKVNAVLLRDVNDHGAA------DLLRWCMENDYA 185
>gi|153854410|ref|ZP_01995688.1| hypothetical protein DORLON_01683 [Dorea longicatena DSM 13814]
gi|149752936|gb|EDM62867.1| hypothetical protein DORLON_01683 [Dorea longicatena DSM 13814]
Length = 442
Score = 43.0 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 56/153 (36%), Gaps = 23/153 (15%)
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
+E D + + L R +K+ C +C +C + + S
Sbjct: 131 ETYQEILDINHEKVYEDLHLSTAAEHTRAYIKVQDGCNQFCSYC-----IIPFARGRVRS 185
Query: 129 KDTEAALAYIQ--EKSQIWEVIFTGGDPLILS------HKRLQKVLKTLRYIKHVQILRF 180
+ ++ L ++ + EV+ TG + LS L ++ + ++ ++ +R
Sbjct: 186 RSRDSVLDEVKTLSANGYKEVVLTG---IHLSSYGIDCDDNLLSLILAIHEVEGIERIRL 242
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
S ++P+ I E Q + + K + H
Sbjct: 243 GS----LEPRIITEEFAQTIAKLPK---MCPHF 268
>gi|323488006|ref|ZP_08093259.1| molybdenum cofactor biosynthesis protein A [Planococcus donghaensis
MPA1U2]
gi|323398274|gb|EGA91067.1| molybdenum cofactor biosynthesis protein A [Planococcus donghaensis
MPA1U2]
Length = 338
Score = 43.0 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G K +LS ++ + ++ TGG+PL
Sbjct: 21 VTDRCNFRCSYCMPKEVFGDDYAFLPKQELLSFEEIHRLTKVFVAM-GVKKIRLTGGEPL 79
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + L ++++ + ++ V+ + +
Sbjct: 80 MR--RGLPQLVEKILSVEGVEDIGLTTNGL 107
>gi|78777220|ref|YP_393535.1| MiaB-like tRNA modifying enzyme [Sulfurimonas denitrificans DSM
1251]
gi|78497760|gb|ABB44300.1| MiaB-like tRNA modifying enzyme [Sulfurimonas denitrificans DSM
1251]
Length = 415
Score = 43.0 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 10/125 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G + + + + E I TG +
Sbjct: 133 KSRAFIKIQEGCNFRCSYCIIPYVRGD--ARSMDEEKILEQIRRLARN-GFGEFILTGTN 189
Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ + ++K + I+ V+ +R S V+P +IN E + L E ++
Sbjct: 190 VGSYGQKNDSSIASLMKKISQIRGVRRIRVGS----VEPIQINDEFKEILDEPWLERHLH 245
Query: 211 IHANH 215
I H
Sbjct: 246 IALQH 250
>gi|46581406|ref|YP_012214.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450828|gb|AAS97474.1| radical SAM domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311235063|gb|ADP87917.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
Length = 370
Score = 43.0 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 53/157 (33%), Gaps = 6/157 (3%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+P R+ L+L + C C C R ++K + AL I + +F G
Sbjct: 86 FPQRLQLELTNCCNNDCVMCPRHGGHFTRKPKHMDLDLVRRALDEIAQHYNYQLQLFHIG 145
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+PL+ R+ ++L L + S+ + P + L + +
Sbjct: 146 EPLLHP--RIFEILDMLEDYPTLGRKWISSKGQELTPDIMRRVLTSKVDYFNYSLLAMTP 203
Query: 213 ANHPYEFS----EEAIAAISRLANAGIILLSQSVLLK 245
A + + RLA+ L Q L+
Sbjct: 204 ATYARIVPNGDYATVRGNLERLADLKRDLGVQRPYLR 240
>gi|89097965|ref|ZP_01170852.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. NRRL
B-14911]
gi|89087467|gb|EAR66581.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. NRRL
B-14911]
Length = 309
Score = 43.0 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 65/174 (37%), Gaps = 27/174 (15%)
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
K +LS ++ E + + I + TGG+PL+ L ++++ L I V +
Sbjct: 14 PKDQLLSFEEIEKLASVFAKAFGIQKFRLTGGEPLMRKD--LPQLVEKLSSIPGVDDIAM 71
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+ ++ P + LK AG +E ++ GI + Q
Sbjct: 72 TTNGILL------PRYAKELKSAGLRRVSI----SLDSLDDEL---FGKINGRGIKV-DQ 117
Query: 241 SVLLKGINDDPEI-LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
+LKGI+ E L + V+ + +++ F+ E+G +
Sbjct: 118 --VLKGIDAAAEAGLKVKINMVVQKGVNDHHV-----IPMAKFFK---EKGHAL 161
>gi|282853150|ref|ZP_06262487.1| radical SAM domain protein [Propionibacterium acnes J139]
gi|282582603|gb|EFB87983.1| radical SAM domain protein [Propionibacterium acnes J139]
Length = 364
Score = 43.0 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 67/166 (40%), Gaps = 14/166 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
C + C +C+RR+ G + ++ + ++ + V GG+P L
Sbjct: 10 PTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEDVRTTGRPAHVQLAGGEP-TLVPS 68
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEF 219
++ V K + I + + R++ ++I LK V +++ P +E
Sbjct: 69 LIEHVAKRVVEI----RWEKVTCGIQTNAARLDGDIIAMLKRHSVRVGVSVDGPPPVHEK 124
Query: 220 SEEAIAAISR----LANAGIILLSQSVL----LKGINDDPEILANL 257
+ + A R LA+A I + +VL ++ +++ LA L
Sbjct: 125 TRGSAAQTFRGLLALAHADIPVRVTTVLSALNVEHLDELAVTLATL 170
>gi|242309031|ref|ZP_04808186.1| tRNA modifying enzyme [Helicobacter pullorum MIT 98-5489]
gi|239524455|gb|EEQ64321.1| tRNA modifying enzyme [Helicobacter pullorum MIT 98-5489]
Length = 424
Score = 43.0 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 14/127 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G + + + + E I TG +
Sbjct: 134 KSRAFIKIQEGCDFACSYCIIPSVRGK--ARSFPKEKIINQIKKLTQN-GFSEFILTGTN 190
Query: 154 PLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ S + + K+L+++ I V+ LR S ++P +I + + L +
Sbjct: 191 --MGSWGKDLGENITKLLESICAIPQVKRLRLGS----LEPSQITQDFLDFLDNPKIEKH 244
Query: 209 IAIHANH 215
+ I H
Sbjct: 245 LHIALQH 251
>gi|90960988|ref|YP_534906.1| Fe-S oxidoreductase component of heme biosynthesis [Pelobacter
carbinolicus DSM 2380]
gi|90823171|gb|ABE01087.1| Fe-S oxidoreductase, putative component of heme biosynthesis
[Pelobacter carbinolicus DSM 2380]
Length = 366
Score = 43.0 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 60/219 (27%), Gaps = 34/219 (15%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
P I + C + C C R +++ + I S+ ++
Sbjct: 8 QQFLPKWIAWESTRRCNLQCIHC-RCSSDADAPDGSFGTEEAFRLIDDICTVSKPV-LVL 65
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY- 208
+GG+PL+ + + Q LR + + + + +K AG +
Sbjct: 66 SGGEPLLRDD------IFDIAAYGTDQGLRMC---MATNGTLVTDAICREMKSAGIRMVS 116
Query: 209 ---------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
I + I A L G+ L S K D L +
Sbjct: 117 LSLDGSRAAIHDDFRRCPGAFDATIRAAETLRRNGLPFLINSSFTKRNQADIAATFALAK 176
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+YL + G+ I+ L
Sbjct: 177 KL---GAVAWYLFMI----------VPTGRGEDILDELI 202
>gi|145299699|ref|YP_001142540.1| molybdenum cofactor biosynthesis protein A [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142852471|gb|ABO90792.1| molybdenum cofactor biosynthesis enzyme A [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 366
Score = 43.0 bits (100), Expect = 0.065, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 17/159 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + + LS + ++ +V TGG+P +
Sbjct: 59 VTDVCNFRCTYCLPDGYRPEGRKSFLSLDEIRRIVSGFAAM-GTRKVRLTGGEPSLRRD- 116
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+++T+ ++ + + R+ + + +++ + P +F
Sbjct: 117 -FTAIIETVANTPGIEKVAMTTNG-----YRLKERAREWFDAGLTALNVSVDSLDPRQFH 170
Query: 221 --------EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + I AG + +VLLKG+ND
Sbjct: 171 QITGENKLAEVMDGIEAALAAGFKSVKINAVLLKGLNDH 209
>gi|155241762|gb|ABT18044.1| heme d1 biosynthesis protein [Heliobacillus mobilis]
Length = 391
Score = 43.0 bits (100), Expect = 0.065, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 43/122 (35%), Gaps = 11/122 (9%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
H G V Y + + C ++C C+ G + + + + +
Sbjct: 25 HGQRNGAVEGYGPVVAWNVSRTCNLHCIHCYSDSDEIDYPGELTTQEAI-KFIDEL-ADF 82
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ ++ +GG+PL+ + L + +R + I P++ + +K+
Sbjct: 83 NVPVLLLSGGEPLMRPD------IFELVAHASKRNVRVT---FSTNGTLITPDVAKEIKK 133
Query: 203 AG 204
G
Sbjct: 134 YG 135
>gi|303229106|ref|ZP_07315908.1| MiaB-like protein [Veillonella atypica ACS-134-V-Col7a]
gi|302516230|gb|EFL58170.1| MiaB-like protein [Veillonella atypica ACS-134-V-Col7a]
Length = 435
Score = 43.0 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C YC FC + L S+ + + + + E++ TG
Sbjct: 147 KSRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVNEAKRLVEHGFHEIVLTG 201
Query: 152 GDPLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ L + L V+K L I ++ +RF S + ++ ELI+ L
Sbjct: 202 ---IHLGNYGVELPGRPTLADVVKALLEIPNLHRIRFGSIESV----EVSDELIE-LMAT 253
Query: 204 GKPVYIAIHA 213
K V +H
Sbjct: 254 DKRVCPHLHL 263
>gi|295677201|ref|YP_003605725.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1002]
gi|295437044|gb|ADG16214.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1002]
Length = 369
Score = 43.0 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +LS ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLAQQFVAH-GVEKIRLTGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ ++ L +
Sbjct: 102 LRKN--LEFLIDRLARL 116
>gi|262374585|ref|ZP_06067859.1| molybdenum cofactor biosynthesis protein A [Acinetobacter junii
SH205]
gi|262310581|gb|EEY91671.1| molybdenum cofactor biosynthesis protein A [Acinetobacter junii
SH205]
Length = 372
Score = 43.0 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 37/103 (35%), Gaps = 6/103 (5%)
Query: 85 PLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
P + + + R+ + C C +C G + LS + + +
Sbjct: 47 PPQPLTDSFSRRLTYLRLSITDFCNFRCEYCLPNGYQGKRPDNELSVSEIATLIRGFAQ- 105
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+V TGG+P I ++++T++ ++ + S
Sbjct: 106 VGTRKVRITGGEPSIRRDVV--EIIQTIKQTPGIETVAMTSNG 146
>gi|220929087|ref|YP_002505996.1| radical SAM protein [Clostridium cellulolyticum H10]
gi|219999415|gb|ACL76016.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
Length = 438
Score = 43.0 bits (100), Expect = 0.067, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
RQ I + ++ + +D + + + + P + ++ C + C C+
Sbjct: 69 FRQMISKVKDWDTAESLWKDSSDNKEIASIPAL--SAPLDLSWEVTKRCNLNCHHCYNDS 126
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+ + + + + + + ++ ++ TGG+PL+ L+ ++ LR
Sbjct: 127 HAINYE---PNLEQIHSVVNELSST-RLRNIVVTGGEPLMRED--LKTIIGWLR 174
>gi|282850176|ref|ZP_06259555.1| MiaB-like protein [Veillonella parvula ATCC 17745]
gi|294791828|ref|ZP_06756976.1| Fe-S oxidoreductase [Veillonella sp. 6_1_27]
gi|294793689|ref|ZP_06758826.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
gi|282579669|gb|EFB85073.1| MiaB-like protein [Veillonella parvula ATCC 17745]
gi|294455259|gb|EFG23631.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
gi|294457058|gb|EFG25420.1| Fe-S oxidoreductase [Veillonella sp. 6_1_27]
Length = 431
Score = 43.0 bits (100), Expect = 0.067, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 55/261 (21%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
R +K+ C YC FC + L S+ + + + E++ TG
Sbjct: 145 RAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVQEAKRLVDHGFHEIVLTG-- 197
Query: 154 PLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK---- 201
+ L + L V+K L I ++ +RF S + ++ EL++ +
Sbjct: 198 -IHLGNYGVELPGRPTLADVVKALLEIPNLYRIRFGSIESV----EVSDELVELMATNKR 252
Query: 202 -EAGKPVYIAIHANHP----------YEFSEEAIAAISRLANAGIILLSQSVLLKGI-ND 249
+ + ++H E+ + + SR+ + I + ++ G +
Sbjct: 253 VCPHLHLPLQAGSDHVLKLMKRHYTLQEYKDLITSLRSRIKDLSIT----TDIIAGFPQE 308
Query: 250 DPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIE---EGQKIVASLKEKI 301
E + T E+ PY + AA + ++ ++ L +
Sbjct: 309 TDEDFEETLNTVREIGFTHIHAFPYSIREGTPAATMAD-QVPEAVKKTRVALLNGLSQ-- 365
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG Y G G++ I
Sbjct: 366 SGYE--RYAKSRIGKPGEILI 384
>gi|121594117|ref|YP_986013.1| molybdenum cofactor biosynthesis protein A [Acidovorax sp. JS42]
gi|120606197|gb|ABM41937.1| GTP cyclohydrolase subunit MoaA [Acidovorax sp. JS42]
Length = 378
Score = 43.0 bits (100), Expect = 0.068, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 101 LLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ +LS ++ + ++ TGG+PL
Sbjct: 46 VTDRCNFRCGYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMAH-GVRKIRLTGGEPL 104
Query: 156 ILSHKRLQKVLKTLRYIKHVQ 176
+ L+ ++ L ++ ++
Sbjct: 105 LRKD--LENLVAQLAELRTLE 123
>gi|198277605|ref|ZP_03210136.1| hypothetical protein BACPLE_03827 [Bacteroides plebeius DSM 17135]
gi|198270103|gb|EDY94373.1| hypothetical protein BACPLE_03827 [Bacteroides plebeius DSM 17135]
Length = 153
Score = 43.0 bits (100), Expect = 0.069, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Query: 93 YPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
YP+ I+ L C C+ C E + G L+ + E + I +
Sbjct: 8 YPETIVDGEGIRYSIYLAGCAHRCKGCHNPESWNPKAGKPLTQEVLEQIIQEINANPLLD 67
Query: 146 EVIFTGGDPLILSHKRL 162
V F+GGDP + L
Sbjct: 68 GVTFSGGDPFYNPEEFL 84
>gi|309781163|ref|ZP_07675900.1| molybdenum cofactor biosynthesis protein A [Ralstonia sp.
5_7_47FAA]
gi|308919984|gb|EFP65644.1| molybdenum cofactor biosynthesis protein A [Ralstonia sp.
5_7_47FAA]
Length = 373
Score = 43.0 bits (100), Expect = 0.069, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ E E + ++ TGG+PL
Sbjct: 50 VTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGEPL 108
Query: 156 ILSH-KRLQKVLKTL 169
+ +RL + L L
Sbjct: 109 LRKDIERLVEKLARL 123
>gi|258516114|ref|YP_003192336.1| molybdenum cofactor biosynthesis protein A [Desulfotomaculum
acetoxidans DSM 771]
gi|257779819|gb|ACV63713.1| molybdenum cofactor biosynthesis protein A [Desulfotomaculum
acetoxidans DSM 771]
Length = 325
Score = 43.0 bits (100), Expect = 0.069, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 20/164 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C V + +L+ ++ E + + ++ FTGG+PL+
Sbjct: 16 VTDRCNLRCVYCMPAGGVAAARHEDILTLEEIEQVIR-AAADVGVRKIRFTGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYE 218
K L ++K + I+ + + + ++ P+ + LK AG K V I++ P
Sbjct: 73 KGLPGLVKNIANIRAIDDIALTTNGILL------PDFGEELKAAGLKRVNISLDTLKPER 126
Query: 219 FSEEAIAAI---------SRLANAGIILLSQSVLLKGINDDPEI 253
F E + L + +V+++GINDD I
Sbjct: 127 FREITRLGALEDVWKGIRAALRLNLTPVKINTVVMRGINDDEII 170
>gi|167586605|ref|ZP_02378993.1| molybdenum cofactor biosynthesis protein A [Burkholderia ubonensis
Bu]
Length = 370
Score = 43.0 bits (100), Expect = 0.069, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 13/101 (12%)
Query: 81 NNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDT 131
H+P G++H R L + + C C +C R + +L+ ++
Sbjct: 20 AAHTPD-GLLHDTLARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTLEEI 78
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
E + ++ TGG+PL+ + L+ +++ L +
Sbjct: 79 ERIARLFVAH-GVEKIRITGGEPLLRKN--LEFLIERLARL 116
>gi|323702404|ref|ZP_08114069.1| RNA modification enzyme, MiaB family [Desulfotomaculum nigrificans
DSM 574]
gi|323532710|gb|EGB22584.1| RNA modification enzyme, MiaB family [Desulfotomaculum nigrificans
DSM 574]
Length = 441
Score = 43.0 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 13/115 (11%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---- 151
R LK+ C +C +C G + L +AA +Q+ E++ TG
Sbjct: 145 RAFLKIQEGCNSFCAYCIIPYARGP-VRSRLPENVLKAATELVQQ--GYQEIVLTGIHIG 201
Query: 152 --GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G + L +++ L + ++ LR S V+P IN LI+ +
Sbjct: 202 AYGQDFTAQNIDLAWLVERLAAVPGLRRLRLGS----VEPHDINTALIEAVANHP 252
>gi|16950513|dbj|BAB72009.1| quinohemoprotein amine dehydrogenase unknown subunit. [Pseudomonas
putida]
Length = 476
Score = 43.0 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 79/227 (34%), Gaps = 34/227 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTG 151
+ ++L + C + C +C++ ++ G +S+ EA++ + Q + V+F G
Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTATAEASVEMLLKESPDEQRYSVVFFG 161
Query: 152 GDPLI---LSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G+PL L + + K V+ + + + E++ L +
Sbjct: 162 GEPLSNRPLIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEEIVDWLNAHRFGL 215
Query: 208 YIAIHANHPYEFS-------------EEAIAAISRL--ANAGIILLSQSVLLKGINDDPE 252
+ + P + + L + ++ L +GI D
Sbjct: 216 SV--SIDGPKTVHDRNRITVGGQGTYDVVRRKVDMLLSRYHSRPVGARVTLTRGITDVET 273
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
I +L + + D+ F LT EE ++ A++K
Sbjct: 274 IWNHLFNELGFAEVGFAPVTSGDMTN----FNLTGEELVQVFANMKA 316
>gi|302759444|ref|XP_002963145.1| hypothetical protein SELMODRAFT_79056 [Selaginella moellendorffii]
gi|300170006|gb|EFJ36608.1| hypothetical protein SELMODRAFT_79056 [Selaginella moellendorffii]
Length = 386
Score = 43.0 bits (100), Expect = 0.072, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C +C E V G L S+D ALA + + ++
Sbjct: 67 GRRHNYLRISL---TERCNLRCHYCMPEEGVKLTPGAHLLSQDEIVALAKVFVGGGVDKI 123
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
TGG+P + + L + L + V+ L + ++
Sbjct: 124 RLTGGEPTVRAD--LTDICHRLSGLSGVKTLAMTTNGLVL 161
>gi|302796832|ref|XP_002980177.1| hypothetical protein SELMODRAFT_112186 [Selaginella moellendorffii]
gi|300151793|gb|EFJ18437.1| hypothetical protein SELMODRAFT_112186 [Selaginella moellendorffii]
Length = 386
Score = 43.0 bits (100), Expect = 0.072, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C +C E V G L S+D ALA + + ++
Sbjct: 67 GRRHNYLRISL---TERCNLRCHYCMPEEGVKLTPGAHLLSQDEIVALAKVFVGGGVDKI 123
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
TGG+P + + L + L + V+ L + ++
Sbjct: 124 RLTGGEPTVRAD--LTDICHRLSGLSGVKTLAMTTNGLVL 161
>gi|154504516|ref|ZP_02041254.1| hypothetical protein RUMGNA_02020 [Ruminococcus gnavus ATCC 29149]
gi|153794998|gb|EDN77418.1| hypothetical protein RUMGNA_02020 [Ruminococcus gnavus ATCC 29149]
Length = 430
Score = 43.0 bits (100), Expect = 0.072, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 21/157 (13%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EE + E D + L R +K+ C +C +C G +
Sbjct: 113 EEAHGDLREVIDINHTKEYENLHLTKQGEHTRAYIKVQDGCNQFCSYCIIPYARGRVRSR 172
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRYIKHVQ 176
+ +D A + + + EV+ TG + LS L +++ + I+ ++
Sbjct: 173 --AKEDVVAEVTDLAKNGY-QEVVLTG---IHLSSYGIDFENEDNLLSLIRAVHEIEGIK 226
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+R S ++P+ I E +Q + K + H
Sbjct: 227 RIRLGS----LEPRIITEEFVQAIAALPK---MCPHF 256
>gi|222111161|ref|YP_002553425.1| molybdenum cofactor biosynthesis protein a [Acidovorax ebreus TPSY]
gi|221730605|gb|ACM33425.1| molybdenum cofactor biosynthesis protein A [Acidovorax ebreus TPSY]
Length = 378
Score = 43.0 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 101 LLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ +LS ++ + ++ TGG+PL
Sbjct: 46 VTDRCNFRCGYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMAH-GVRKIRLTGGEPL 104
Query: 156 ILSHKRLQKVLKTLRYIKHVQ 176
+ L+ ++ L ++ ++
Sbjct: 105 LRKD--LENLVAQLAELRTLE 123
>gi|119962194|ref|YP_947341.1| molybdenum cofactor biosynthesis protein A [Arthrobacter aurescens
TC1]
gi|119949053|gb|ABM07964.1| molybdopterin cofactor synthesis protein A [Arthrobacter aurescens
TC1]
Length = 379
Score = 43.0 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 22/176 (12%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G+ RY R L L C + C +C E + K V++ + +
Sbjct: 36 GLWDRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLSKQAVMTKDEIVRIVRVGVNALG 95
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ E+ TGG+PL+ + L +++ +R + + + + Q LK A
Sbjct: 96 VRELRLTGGEPLVRAD--LVEIIAGIRSDHPDLPISMTTNGVGL------DKKAQALKAA 147
Query: 204 GK-PVYIAIHANHPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGIND 249
G + +++ + H F++ AG+ + +VL++GIND
Sbjct: 148 GLTRINVSLDSLHEETFTKLTRRPFLDRVLAGVDAAWAAGLGPVKLNAVLMRGIND 203
>gi|229118218|ref|ZP_04247576.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock1-3]
gi|228665265|gb|EEL20749.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock1-3]
Length = 339
Score = 43.0 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 26/166 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFTGGDP 154
++ C C +C E+ G + I+ + ++ TGG+P
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPD--YAFLKDEFLLTFDEIERLAKVFVSIGVRKIRLTGGEP 79
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
L+ L K++ L I + + + + Q + LKEAG
Sbjct: 80 LLRKD--LTKLIACLVKIDGLVDIGLTTNAIHLTKQ------AKALKEAGLHRVNVSLDA 131
Query: 212 -------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 132 IDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|291276833|ref|YP_003516605.1| molybdenum cofactor biosynthesis protein A [Helicobacter mustelae
12198]
gi|290964027|emb|CBG39866.1| molybdenum cofactor biosynthesis protein A [Helicobacter mustelae
12198]
Length = 323
Score = 43.0 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 26/211 (12%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG 152
D I + + C C++C E L +++ I ++ TGG
Sbjct: 11 DTIRVSVTKQCNFRCQYCMPNTPFDMPDKEEYVP--LENVLEFLKVGINQGIKKIRITGG 68
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPELIQCLKE 202
+PL+ L + LR L + ++ RIN L LK+
Sbjct: 69 EPLLRQD--LPDFIAALRAYSKEVELALTTNAFLLAKSAKTLKEAGLDRINISL-DSLKQ 125
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + + I G + SV+L+G+ND + +L+
Sbjct: 126 ER-----VMQISKRDGLHN-VVHGIDEAIACGFRVKINSVILRGVNDG--EILDLLEYAK 177
Query: 263 ELRIKPYYLHHPDLAAGTSHFR-LTIEEGQK 292
I Y+ + + + ++ +E +
Sbjct: 178 NKGISIRYIEYMENVHANAQIAGISEKEILE 208
>gi|304317725|ref|YP_003852870.1| radical SAM protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302779227|gb|ADL69786.1| Radical SAM domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 416
Score = 43.0 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D IG N + +++ + + C + C +C +K +LS+ D +
Sbjct: 73 CLDNIGLLNADQTYEFEIDFIPKVVFSITNRCNLSCEYCCVDADNYLKKDDILSTSDIKR 132
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSH 159
A+ I + + EV+ +GG+PL+
Sbjct: 133 AIDKILK-LKPQEVVISGGEPLVRDD 157
>gi|159042455|ref|YP_001541707.1| radical SAM domain-containing protein [Caldivirga maquilingensis
IC-167]
gi|157921290|gb|ABW02717.1| Radical SAM domain protein [Caldivirga maquilingensis IC-167]
Length = 382
Score = 43.0 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 87/231 (37%), Gaps = 17/231 (7%)
Query: 93 YPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-I 148
Y R + + CP+ CR C R + LS+ + + + + E + V I
Sbjct: 5 YSQRPLLVFWETTKACPLSCRHC-RANAILKPLPGELSTDEGKRLIEQLPEFGKPTPVLI 63
Query: 149 FTGGDPLILSH-KRLQKVLKTLR---YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
TGGDPL+ L K+L + + S I + +R++ + +
Sbjct: 64 LTGGDPLMREDIFELIDYAKSLNVPVAVSPTVSEKLLSDNVIDELRRVSSVSVSLDGASP 123
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK-GINDDPEILANLMRTFVE 263
+ N +E + +A IS L AG+ + + +K +++ P I+ L V
Sbjct: 124 TTHEYIRNRNGVFELTLKA---ISSLLKAGVKVQVNTTFMKLNVHELPLIVKVLKDLGVY 180
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+ +H + LT EE + +V L +S ++ P
Sbjct: 181 TWEVFFLIHVGRGIELEA---LTPEETEDVVNVLY-DVSKYGFTVRTVEAP 227
>gi|20808722|ref|NP_623893.1| Fe-S oxidoreductase [Thermoanaerobacter tengcongensis MB4]
gi|20517363|gb|AAM25497.1| predicted Fe-S oxidoreductases [Thermoanaerobacter tengcongensis
MB4]
Length = 475
Score = 43.0 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGD 153
+++++ + + C C++C+ + + + + Y + I+ + GG+
Sbjct: 86 EKLVIIVTNNCNCRCKYCYANGGSYGLDVNNMKRDEAKNIIDYFVKNFRVIYNIQIFGGE 145
Query: 154 PLILSH--KRLQKVLKTLRY 171
P++ K + + + LR
Sbjct: 146 PMLNYDVIKVICEYFENLRN 165
>gi|253700573|ref|YP_003021762.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M21]
gi|251775423|gb|ACT18004.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M21]
Length = 326
Score = 43.0 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 13/122 (10%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQI 144
++ Y RI + C + CR+C E V VLS D + I
Sbjct: 3 LIDTYGRRINYLRLSVTDRCNLRCRYCMPEEGVEKLDHSQVLSYADLLRISTE-AVAAGI 61
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
++ TGG+PL+ K + L+ L + ++ L + ++ E+ Q L+EAG
Sbjct: 62 EKIRVTGGEPLVR--KGIISFLERLGALPGLKELVLTTNGLLL------KEMAQGLREAG 113
Query: 205 KP 206
Sbjct: 114 VQ 115
>gi|197118653|ref|YP_002139080.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
gi|197088013|gb|ACH39284.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
Length = 326
Score = 43.0 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 13/122 (10%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQI 144
++ Y RI + C + CR+C E V VLS D + I
Sbjct: 3 LIDTYGRRINYLRLSVTDRCNLRCRYCMPEEGVEKLDHSQVLSYADLLRISTE-AVAAGI 61
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
++ TGG+PL+ K + L+ L + ++ L + ++ E+ Q L+EAG
Sbjct: 62 EKIRVTGGEPLVR--KGIISFLERLGALPGLKELVLTTNGLLL------KEMAQGLREAG 113
Query: 205 KP 206
Sbjct: 114 VQ 115
>gi|303232181|ref|ZP_07318884.1| MiaB-like protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513287|gb|EFL55326.1| MiaB-like protein [Veillonella atypica ACS-049-V-Sch6]
Length = 431
Score = 43.0 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C YC FC + L S+ + + + + E++ TG
Sbjct: 143 KSRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVNEAKRLVEHGFHEIVLTG 197
Query: 152 GDPLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ L + L V+K L I ++ +RF S + ++ ELI+ L
Sbjct: 198 ---IHLGNYGVELPGRPTLADVVKALLEIPNLHRIRFGSIESV----EVSDELIE-LMAT 249
Query: 204 GKPVYIAIHA 213
K V +H
Sbjct: 250 DKRVCPHLHL 259
>gi|169828793|ref|YP_001698951.1| molybdenum cofactor biosynthesis protein A [Lysinibacillus
sphaericus C3-41]
gi|168993281|gb|ACA40821.1| Molybdenum cofactor biosynthesis protein A [Lysinibacillus
sphaericus C3-41]
Length = 308
Score = 43.0 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 74/233 (31%), Gaps = 36/233 (15%)
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+L+ + E + I + +V TGG+PL+ L +++ + ++ V+ +
Sbjct: 14 SSDKILNFDEIERLVK-IFVSLGVKKVRITGGEPLLRRD--LTELIARIHRLEGVEDIAL 70
Query: 181 HSRVPIV------DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
+ ++ Q + L + N + I + A AG
Sbjct: 71 TTNGTLLKKYAQPLAQAGLSRVSISLDSLNDERFF--EMNGHRGKVSTVLEGIEKAAEAG 128
Query: 235 IILLSQSVLLKGINDDPEILANLM--RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG-Q 291
+ + V+ KG ND I LR Y ++ +R+ +
Sbjct: 129 LQVKINMVVQKGKNDQDVIEMARFFKEKQHILRFIEY-----MDVGNSNGWRMDDVLAKK 183
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
IV + + +P I + + +V Y D+ +
Sbjct: 184 DIVEQIHQHSP--LRP--------------IAPNYLGEVAT-RYQYKDNQGEI 219
>gi|326317352|ref|YP_004235024.1| molybdenum cofactor biosynthesis protein A [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323374188|gb|ADX46457.1| molybdenum cofactor biosynthesis protein A [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 386
Score = 43.0 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 81/233 (34%), Gaps = 27/233 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G G +LS ++ + ++ TGG+PL
Sbjct: 53 VTDRCNFRCSYCMPKEVFGKDYPYLSHGDLLSFEEISRLARVFLAH-GVRKIRLTGGEPL 111
Query: 156 ILSHKRLQKVLKTLR-------YIKHVQILRFHSRVPIVDPQRINPELIQC-LKEAGKPV 207
+ + L+ +++ L + + + S + + L + +
Sbjct: 112 LR--RHLENLVEQLAGLRTTEGRVPDLTLTTNGSLLARKARALRDAGLARLTVSLDSLQD 169
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ N E ++ I AG + V+ +G ND + + R F I
Sbjct: 170 SVFRRMNDVDFPVAEVLSGIEAAQAAGFERIKVNMVVKRGTND--HEIVPMARHFRGTGI 227
Query: 267 KPYYLHHPDLAAGTSHFRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYG 318
++ + D T+ +R+ +++ L++++ + P G
Sbjct: 228 TLRFIEYMD-VGATNGWRMDEVLPSAQVIDRLRQELP------LVQLPPAAPG 273
>gi|170290655|ref|YP_001737471.1| molybdenum cofactor biosynthesis protein A [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174735|gb|ACB07788.1| molybdenum cofactor biosynthesis protein A [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 310
Score = 43.0 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ + C C FC R + ++ + + + + V TGG+PL+
Sbjct: 17 VTNSCNYNCFFCHREGHYVRGEEMRP--EEIGRLMRVLSKH-GVKRVKLTGGEPLMRRD- 72
Query: 161 RLQKVLKTLRY 171
L++++ L+
Sbjct: 73 -LEEIVSELKS 82
>gi|170696802|ref|ZP_02887909.1| molybdenum cofactor biosynthesis protein A [Burkholderia graminis
C4D1M]
gi|170138291|gb|EDT06512.1| molybdenum cofactor biosynthesis protein A [Burkholderia graminis
C4D1M]
Length = 369
Score = 43.0 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRAVFDKDYAFLPHSALLTFEEIERLARLFVAH-GVEKIRLTGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLAQL 116
>gi|120601419|ref|YP_965819.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120561648|gb|ABM27392.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4]
Length = 317
Score = 43.0 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 53/157 (33%), Gaps = 6/157 (3%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+P R+ L+L + C C C R ++K + AL I + +F G
Sbjct: 33 FPQRLQLELTNCCNNDCVMCPRHGGHFTRKPKHMDLDLVRRALDEIAQHYNYQLQLFHIG 92
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+PL+ R+ ++L L + S+ + P + L + +
Sbjct: 93 EPLLHP--RIFEILDMLEDYPTLGRKWISSKGQELTPDIMRRVLTSKVDYFNYSLLAMTP 150
Query: 213 ANHPYEFS----EEAIAAISRLANAGIILLSQSVLLK 245
A + + RLA+ L Q L+
Sbjct: 151 ATYARIVPNGDYATVRGNLERLADLKRDLGVQRPYLR 187
>gi|221211776|ref|ZP_03584754.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD1]
gi|221167861|gb|EEE00330.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD1]
Length = 367
Score = 43.0 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 26/157 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDPLI 156
++ C C +C RE+ GS + + A L I + ++ TGG+PL+
Sbjct: 41 VIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLGRIARAFVSLGVEKIRITGGEPLL 100
Query: 157 LSHKRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ L+ +++ L + V L + ++ + L++AG
Sbjct: 101 R--RHLETLIERLAALTTVDGRPVELALTTNGALL------AAKARTLRDAGLTRVTV-- 150
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
A R+++A + + S +L GI
Sbjct: 151 -----SLDALDDAVFRRMSDADVPV---SRVLAGIEA 179
>gi|281416862|ref|ZP_06247882.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
JW20]
gi|281408264|gb|EFB38522.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
JW20]
Length = 434
Score = 43.0 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 51/123 (41%), Gaps = 17/123 (13%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
V++ R +K+ C +C +C G + S ++ ++ + S EV+
Sbjct: 138 VYKERTRAFIKIQEGCNQFCTYCIIPYARGPVRSR--SEENILKEVSGL-AHSGYKEVVL 194
Query: 150 TG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
TG D + + L +++ + I+ ++ +R S ++P + E ++ +K
Sbjct: 195 TGIHVASYGKD---IKNTSLIDIIRKVHEIEGIERIRLGS----IEPTTVTEEFVRAIKG 247
Query: 203 AGK 205
K
Sbjct: 248 MEK 250
>gi|182626906|ref|ZP_02954640.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens D str.
JGS1721]
gi|177907756|gb|EDT70368.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens D str.
JGS1721]
Length = 434
Score = 43.0 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SKD + L I+ + E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCL-----IPYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L +L+ + I ++ +R S P + + I LK+
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVV-RRILALKKLCPH 254
Query: 207 VYIAIH 212
++++
Sbjct: 255 FHLSLQ 260
>gi|168215652|ref|ZP_02641277.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens NCTC 8239]
gi|182382416|gb|EDT79895.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens NCTC 8239]
Length = 434
Score = 43.0 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SKD + L I+ + E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCL-----IPYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L +L+ + I ++ +R S P + + I LK+
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVV-RRILALKKLCPH 254
Query: 207 VYIAIH 212
++++
Sbjct: 255 FHLSLQ 260
>gi|110803412|ref|YP_699306.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens SM101]
gi|110683913|gb|ABG87283.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens SM101]
Length = 434
Score = 43.0 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SKD + L I+ + E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCL-----IPYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L +L+ + I ++ +R S P + + I LK+
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVV-RRILALKKLCPH 254
Query: 207 VYIAIH 212
++++
Sbjct: 255 FHLSLQ 260
>gi|110801313|ref|YP_696705.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens ATCC
13124]
gi|110675960|gb|ABG84947.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens ATCC
13124]
Length = 434
Score = 43.0 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SKD + L I+ + E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCL-----IPYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L +L+ + I ++ +R S P + + I LK+
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVV-RRILALKKLCPH 254
Query: 207 VYIAIH 212
++++
Sbjct: 255 FHLSLQ 260
>gi|18311007|ref|NP_562941.1| MiaB-like tRNA modifying protein [Clostridium perfringens str. 13]
gi|168208727|ref|ZP_02634352.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens B str.
ATCC 3626]
gi|168212938|ref|ZP_02638563.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens CPE str.
F4969]
gi|18145689|dbj|BAB81731.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|170713061|gb|EDT25243.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens B str.
ATCC 3626]
gi|170715635|gb|EDT27817.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens CPE str.
F4969]
Length = 434
Score = 43.0 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SKD + L I+ + E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCL-----IPYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L +L+ + I ++ +R S P + + I LK+
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVV-RRILALKKLCPH 254
Query: 207 VYIAIH 212
++++
Sbjct: 255 FHLSLQ 260
>gi|146296268|ref|YP_001180039.1| radical SAM domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409844|gb|ABP66848.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 465
Score = 43.0 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 91/242 (37%), Gaps = 39/242 (16%)
Query: 89 IVHRY----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y P IL+ C ++C+ C+ E QK L + + + ++ +
Sbjct: 100 LIKKYDINIPYAILIDPTAACNLHCKGCWAGEY---QKAAKLDYEILDRVVKE-AQEIGV 155
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ +IF+GG+PL+ L+ + + + ++ E I+ + + G
Sbjct: 156 YFIIFSGGEPLLRKDDILKLC----------EKYEDTVFLSFTNATLMDDEFIEKVAKVG 205
Query: 205 KPVYIAIHANHPYEFSEE---------AIAAISRLANAGIILLSQSVLLKGINDDP---E 252
+ AI + + ++E + A+ +L AG++ + + ++ E
Sbjct: 206 -NLAFAISIDGFEKSTDERRGQGVFKKVVTAMEKLKEAGVVFGFSTTYHRYNVEEVSSDE 264
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYI 310
+ L+ + Y+ A S+ + K + ++ +P ++
Sbjct: 265 YIDFLIEKGAKFGWYFTYVPVGKDAD-VSYMATPEQRAYMYKRIEEIR-----WSKPIFV 318
Query: 311 LD 312
LD
Sbjct: 319 LD 320
>gi|125972674|ref|YP_001036584.1| RNA modification protein [Clostridium thermocellum ATCC 27405]
gi|256004833|ref|ZP_05429807.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
2360]
gi|125712899|gb|ABN51391.1| RNA modification enzyme, MiaB family [Clostridium thermocellum ATCC
27405]
gi|255991143|gb|EEU01251.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
2360]
gi|316941090|gb|ADU75124.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
1313]
Length = 434
Score = 43.0 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 51/123 (41%), Gaps = 17/123 (13%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
V++ R +K+ C +C +C G + S ++ ++ + S EV+
Sbjct: 138 VYKERTRAFIKIQEGCNQFCTYCIIPYARGPVRSR--SEENILKEVSGL-AHSGYKEVVL 194
Query: 150 TG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
TG D + + L +++ + I+ ++ +R S ++P + E ++ +K
Sbjct: 195 TGIHVASYGKD---IKNTSLIDIIRKVHEIEGIERIRLGS----IEPTTVTEEFVRAIKG 247
Query: 203 AGK 205
K
Sbjct: 248 MEK 250
>gi|229109614|ref|ZP_04239203.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock1-15]
gi|228673862|gb|EEL29117.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock1-15]
Length = 333
Score = 43.0 bits (100), Expect = 0.078, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ + E + ++ TGG+PL
Sbjct: 16 VIDRCNFRCTYCMPAEVFGPDYAFLQEELLLTFDEIERLARLFISM-GVNKIRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ K L ++ L ++ +Q + + + Q
Sbjct: 75 LR--KHLPTLIARLANLEGLQDIGLTTNGIHLAKQ 107
>gi|89896750|ref|YP_520237.1| hypothetical protein DSY4004 [Desulfitobacterium hafniense Y51]
gi|89336198|dbj|BAE85793.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 306
Score = 43.0 bits (100), Expect = 0.078, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 81/242 (33%), Gaps = 35/242 (14%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPL-KGIVHRYPDRILLKLLHVCPVYCRFCFR 114
+ RQ I Q E+L E + + + P G H R+ L + C + CRFC R
Sbjct: 1 MRRQIINQIEQLIETQMEHQLRTPNISDHPCFNGAAHGKKGRLHLPISPACNIQCRFCRR 60
Query: 115 RE-----MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKT 168
G KG + + + ++ +I V G GD L S ++ +
Sbjct: 61 ACNSKELRPGVAKGILPIEEAVDIVGKALELCPEITVVGIAGPGDAL-ASFHAIEAFRQV 119
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-----------HA---- 213
+ H+ I + + + +L+ L V + H
Sbjct: 120 HKAYPHL-IKCLSTNGLALPGK---TDLLYDLGVRTVTVTVNAVDPWSASKVVSHILWEG 175
Query: 214 ------NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+ I + + GI++ +VL+ IND + ++ RT +
Sbjct: 176 KVYRGEEAGRILLAHQLRGIQQASQRGIMVKVNTVLIPTIND--HCIGDIARTVKQAGAT 233
Query: 268 PY 269
+
Sbjct: 234 VH 235
>gi|229007366|ref|ZP_04164964.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock1-4]
gi|228753897|gb|EEM03337.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock1-4]
Length = 364
Score = 43.0 bits (100), Expect = 0.080, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 70/218 (32%), Gaps = 28/218 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C R E + L+ + + + I E +Q ++F+GGD
Sbjct: 7 PFIVIWEVTRACELKCLHC-RAEAQYRRDPRELTFLEGKRLIDEIYEMNQPM-LVFSGGD 64
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPIVDPQRINPELIQCLKEAGKPVYIA 210
PL+ + L + LR S P V + I L + A
Sbjct: 65 PLMRED------IYELANYAVQKGLRVSMTPSATPNVTKEAIQKAKGVGLARWAFSIDGA 118
Query: 211 IHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
H + + +AI ++ L I + + + K + E +A L+
Sbjct: 119 TAETHDRFRGVAGSFQLTMDAIQYLNELQ---IPVQINTTISKYNVHEVEEMAALVEKL- 174
Query: 263 ELRIKPYYLHHPDLAAG--TSHFRLTIEEGQKIVASLK 298
+ + +E + L
Sbjct: 175 --GGVLWSVFFLVPTGRGSVEDMISPVEHEL-VFRKLY 209
>gi|220933522|ref|YP_002512421.1| GTP cyclohydrolase subunit MoaA [Thioalkalivibrio sp. HL-EbGR7]
gi|219994832|gb|ACL71434.1| GTP cyclohydrolase subunit MoaA [Thioalkalivibrio sp. HL-EbGR7]
Length = 327
Score = 43.0 bits (100), Expect = 0.080, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 35/95 (36%), Gaps = 4/95 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + L + C + C +C + + LS + + + + V T
Sbjct: 10 RHIEYVRLSVTDQCDLRCFYCMPKGFKDFEEPEHWLSFDEIARVMGAFGQ-LGVQRVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
GG+PL+ + ++ L + + + +
Sbjct: 69 GGEPLVRKD--IPDLVSRLAALPGINDISLSTNAT 101
>gi|294778157|ref|ZP_06743588.1| radical SAM domain protein [Bacteroides vulgatus PC510]
gi|294448016|gb|EFG16585.1| radical SAM domain protein [Bacteroides vulgatus PC510]
Length = 433
Score = 43.0 bits (100), Expect = 0.080, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P+R+ + C + C+ CF S + +SS DT+ L+ + + I + TGG+
Sbjct: 107 PERVDFLITKHCNLACKHCFEGSSP-SFEVKRISSSDTDRILSQFEA-ANIQTLKITGGE 164
Query: 154 PLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
P + L + I H + + + +++ QRI+ +K+ + I
Sbjct: 165 PFSHPD--IDNFL--FKAIQCHFETI-ILTNALLLNKQRID-----MIKKGHIQLGI 211
>gi|220929027|ref|YP_002505936.1| molybdenum cofactor biosynthesis protein A [Clostridium
cellulolyticum H10]
gi|219999355|gb|ACL75956.1| molybdenum cofactor biosynthesis protein A [Clostridium
cellulolyticum H10]
Length = 328
Score = 43.0 bits (100), Expect = 0.081, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQI 144
++ +Y +I + C + C +C + V + +LS K+ + + + I
Sbjct: 4 LIDKYGRKIDYLRISVTDRCNLRCIYCIPQFGVLQTREEDMLSIKEIVSFVK-VASSHGI 62
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++ TGG+PL+ + ++ ++ I + + +
Sbjct: 63 KKIKITGGEPLLRKD--IVSLVSCIKEIDSITDISMTTNGV 101
>gi|326915316|ref|XP_003203965.1| PREDICTED: LOW QUALITY PROTEIN: molybdenum cofactor biosynthesis
protein 1-like, partial [Meleagris gallopavo]
Length = 651
Score = 42.6 bits (99), Expect = 0.083, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V + L + LA + K + ++
Sbjct: 27 GRQHNYLRISL---TEKCNLRCQYCMPEEGVQLTPKSELLTAQEIITLAGLFVKEGVEKI 83
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L ++ ++ + +
Sbjct: 84 RLTGGEPLIRPDVV--DIVGQLYKLEGLKTIAVTTNGI 119
>gi|296158258|ref|ZP_06841090.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. Ch1-1]
gi|295891594|gb|EFG71380.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. Ch1-1]
Length = 369
Score = 42.6 bits (99), Expect = 0.083, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 11/82 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R + +LS ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRSVFDKDYTFLPHSALLSFEEIERLARIFVAH-GVEKIRLTGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYIKHVQI 177
+ + L+ ++ L H+
Sbjct: 102 LRKN--LEFLIDRLA---HLTT 118
>gi|32472889|ref|NP_865883.1| molybdopterin cofactor synthesis protein A [Rhodopirellula baltica
SH 1]
gi|81661860|sp|Q7UT69|MOAA_RHOBA RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|32444126|emb|CAD73568.1| molybdopterin cofactor synthesis protein A [Rhodopirellula baltica
SH 1]
Length = 359
Score = 42.6 bits (99), Expect = 0.083, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + + + C + C +C + VL+ ++ E + ++ + ++ T
Sbjct: 36 RRHDSLRISITDRCNIRCFYCMPEHDAEFLPRSGVLTFEEIERLAGLLVKRCGVRDIRIT 95
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
GG+PL+ +++ L I ++ L +
Sbjct: 96 GGEPLVRRDCV--DLIRMLARIDGLEDLSMTTNGM 128
>gi|253682144|ref|ZP_04862941.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
gi|253561856|gb|EES91308.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
Length = 433
Score = 42.6 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 15/131 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SKD E + ++ + E+I +G
Sbjct: 141 KTRAFLKIQDGCNNFCSYCL-----IPFARGAVCSKDPEIIIDEVKKLSEHGFKEIILSG 195
Query: 152 GDPLILS-----HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AG 204
D L +VLK + I+ + +R S P + I E I LK+
Sbjct: 196 IDIASYGVDLEGDWNLLRVLKAIDEIEGINRVRIGSIGPEFFNEDIIKE-IGSLKKLCPH 254
Query: 205 KPVYIAIHANH 215
+ + N
Sbjct: 255 FHLSLQSGCNS 265
>gi|148244786|ref|YP_001219480.1| molybdenum cofactor biosynthesis protein A [Candidatus
Vesicomyosocius okutanii HA]
gi|146326613|dbj|BAF61756.1| molybdenum cofactor biosynthesis protein A [Candidatus
Vesicomyosocius okutanii HA]
Length = 331
Score = 42.6 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 78/233 (33%), Gaps = 43/233 (18%)
Query: 101 LLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C C +C + ++ +LS KD E + + I +V TGG+PL+
Sbjct: 19 VTEHCNYRCFYCRDNKYTPHCKREDILSYKDIERIVQLFAQ-LGISKVRLTGGEPLLRKD 77
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY-E 218
+ K+ + + ++ + + + L++ K +Y N
Sbjct: 78 --IYKIARIISHVDGINDIPLSTNA-------------HLLEKFAKKLYQN-GINRVNIS 121
Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
+ G + + ++KGI+ ++ +++ + + +
Sbjct: 122 IDSLIPKKFEEITRGG----NLTKVIKGIDAAIQV----NMRPIKINMVTMRGVNDNEIE 173
Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
F I +G I +I +P G +KI TH I +
Sbjct: 174 SMIDFA--INKGIDI--------------RFIETMPIGSSGIKILTHYISEKN 210
>gi|72161144|ref|YP_288801.1| hypothetical protein Tfu_0740 [Thermobifida fusca YX]
gi|71914876|gb|AAZ54778.1| hypothetical protein Tfu_0740 [Thermobifida fusca YX]
Length = 302
Score = 42.6 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 21/168 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK------SQIWEVIFTGGDP 154
L C C +C + + + E + ++ + +I + G+
Sbjct: 14 PLASCDYDCSYCPFAKRRDTPEQLRADRAAVERFVDWVASQATQSPGKRISVLFTPWGEG 73
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ S R + L ++ HV+ + + + ++ L E +
Sbjct: 74 LVRSWYR--AAMVRLSHLPHVERVAIQTNLSC---------RVEWLAECDRETAALWATF 122
Query: 215 HPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
HP + E +A RL G+ SV + G+ + L
Sbjct: 123 HPSQTRYERFLAKCFRLRELGVRF---SVGIVGLPEHLAAACRLRADL 167
>gi|332532611|ref|ZP_08408488.1| molybdenum cofactor biosynthesis protein A [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038032|gb|EGI74480.1| molybdenum cofactor biosynthesis protein A [Pseudoalteromonas
haloplanktis ANT/505]
Length = 323
Score = 42.6 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 62/205 (30%), Gaps = 13/205 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C G L+ + L I +V TGG+P +
Sbjct: 17 ITDVCNFKCVYCLPDGYQGGHDRGFLTIDEISNTLKAF-AHHGIEKVRITGGEPTLRKD- 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAGKPV--YIAIHANHP 216
V++ + + ++ + + + + + + + +
Sbjct: 75 -FIDVVRAAKDVAGIKKIAMTTNGFSLHKNIHDWVDAGLNAINVSIDSLDSRMFNTITGH 133
Query: 217 YEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELR-IKPYYLHHP 274
+F+ + L GI + SVL+K N V+ R + ++
Sbjct: 134 DKFTSVMKGIDTAL-ETGIDSVKINSVLMKQYNTKEFDTFLNW---VKHRPVTIRFIELM 189
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKE 299
+ F GQ + L +
Sbjct: 190 QTNDNKAFFDANHVSGQVLKTQLLQ 214
>gi|317062972|ref|ZP_07927457.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
ATCC 49185]
gi|313688648|gb|EFS25483.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
ATCC 49185]
Length = 327
Score = 42.6 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 88 GIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQ 143
++ +Y +I ++ C + C +C E V S +K +L+ ++ E + +
Sbjct: 3 NLLDKYRRKIDYLRISIIDKCNLKCIYCMPEESVESIEKDELLTFEEIER-ICIAAAEIG 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
I ++ TGG+PLI K + ++K ++ IK ++ + + +++
Sbjct: 62 IKKIKITGGEPLIR--KEVAGLVKKIKLIKGIENVTLTTNGILLEKN 106
>gi|228999813|ref|ZP_04159385.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock3-17]
gi|228759755|gb|EEM08729.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock3-17]
Length = 364
Score = 42.6 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 70/218 (32%), Gaps = 28/218 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C R E + L+ + + + I E +Q ++F+GGD
Sbjct: 7 PFIVIWEVTRACELKCLHC-RAEAQYRRDPRELTFLEGKRLIDEIYEMNQPM-LVFSGGD 64
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPIVDPQRINPELIQCLKEAGKPVYIA 210
PL+ + L + LR S P V + I L + A
Sbjct: 65 PLMRED------IYELANYAVQKGLRVSMTPSATPNVTKEAIQKAKGVGLARWAFSIDGA 118
Query: 211 IHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
H + + +AI ++ L I + + + K + E +A L+
Sbjct: 119 TAETHDRFRGVAGSFQLTMDAIQYLNELQ---IPVQINTTISKYNVHEVEEMAALVEKL- 174
Query: 263 ELRIKPYYLHHPDLAAG--TSHFRLTIEEGQKIVASLK 298
+ + +E + L
Sbjct: 175 --GGVLWSVFFLVPTGRGSVEDMISPVEHEL-VFRKLY 209
>gi|295103959|emb|CBL01503.1| SSU ribosomal protein S12P methylthiotransferase [Faecalibacterium
prausnitzii SL3/3]
Length = 441
Score = 42.6 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 69/211 (32%), Gaps = 29/211 (13%)
Query: 66 ELNILPEEREDPIGDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
E E+ + G PL G ++ LK+ C C +C + G
Sbjct: 113 ERLFHGEDHLESYGAKKDFPLGGKRVIGTPAHYAYLKIAEGCNNRCHYCAIPGIRGPLHS 172
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQIL 178
++ EA ++ + E+I DP + ++L L + ++ +
Sbjct: 173 RDMADCVAEA--RWLAG-EGVKELIVVAQDPTAYGEDWGKPGSICELLDKLNKVPGLEWI 229
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP----------YEFSEEAIAAI 227
R P+RI E I +K K V Y+ + H E + I
Sbjct: 230 RI----MYAYPERITDEFIAAMKRNEKVVPYLDLPIQHCNDTILKNMNRRSTRAELLEVI 285
Query: 228 SRLANA--GIILLSQSVLLKGINDDPEILAN 256
+L GI L + L+ G + E
Sbjct: 286 GKLRREIPGITLR--TTLIAGFPGETEEQFE 314
>gi|283777944|ref|YP_003368699.1| radical SAM domain-containing protein [Pirellula staleyi DSM 6068]
gi|283436397|gb|ADB14839.1| radical SAM domain protein [Pirellula staleyi DSM 6068]
Length = 287
Score = 42.6 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 49/135 (36%), Gaps = 14/135 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTG-GDPLILS 158
L C C +C + + L + E + ++ ++ ++ FT G+ L
Sbjct: 12 PLSSCNYGCDYCPFAKHHETAAELALDRQQLERFVDWVTTRTDQRCDIFFTPWGEALTRR 71
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
R + + L + HV+ + + + +Q L+++ + HP E
Sbjct: 72 WYR--EAMVRLSWQPHVRRVAVQTNLSAD---------LQWLEKSERERIGLWCTYHPGE 120
Query: 219 FS-EEAIAAISRLAN 232
+ + + ++L
Sbjct: 121 VTHAKFLDQCAQLQQ 135
>gi|160942860|ref|ZP_02090099.1| hypothetical protein FAEPRAM212_00336 [Faecalibacterium prausnitzii
M21/2]
gi|158445761|gb|EDP22764.1| hypothetical protein FAEPRAM212_00336 [Faecalibacterium prausnitzii
M21/2]
Length = 441
Score = 42.6 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 69/211 (32%), Gaps = 29/211 (13%)
Query: 66 ELNILPEEREDPIGDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
E E+ + G PL G ++ LK+ C C +C + G
Sbjct: 113 ERLFHGEDHLESYGAKKDFPLGGKRVIGTPAHYAYLKIAEGCNNRCHYCAIPGIRGPLHS 172
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQIL 178
++ EA ++ + E+I DP + ++L L + ++ +
Sbjct: 173 RDMADCVAEA--RWLAG-EGVKELIVVAQDPTAYGEDWGKPGSICELLDKLNKVPGLEWI 229
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP----------YEFSEEAIAAI 227
R P+RI E I +K K V Y+ + H E + I
Sbjct: 230 RI----MYAYPERITDEFIAAMKRNEKVVPYLDLPIQHCNDTILKNMNRRSTRAELLEVI 285
Query: 228 SRLANA--GIILLSQSVLLKGINDDPEILAN 256
+L GI L + L+ G + E
Sbjct: 286 GKLRREIPGITLR--TTLIAGFPGETEEQFE 314
>gi|148262099|ref|YP_001228805.1| radical SAM domain-containing protein [Geobacter uraniireducens
Rf4]
gi|146395599|gb|ABQ24232.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
Length = 357
Score = 42.6 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 38/219 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + C + C C R + ++++ + L I + S+ V+ +GG+
Sbjct: 7 PKWIAWETTQKCNLKCVHC-RCSSEMTSSEGDFTTEEGKKLLKEIADFSKPV-VVLSGGE 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
PL+ L +L + S + + E+ + +KEA +
Sbjct: 65 PLMRKDIFELAGYGTSLG-----LRMCMASNGAL-----VTDEVCEKMKEADIKMVSLSL 114
Query: 209 ----IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
A+H N P F A G L S K D +AN +
Sbjct: 115 DGSTAAVHDNFRQCPGSFDGVVRA-AELFRKHGQKFLINSSFTKRNQAD---IANTFKVA 170
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L +Y+ + G++I++ L K
Sbjct: 171 KSLGATAWYMFMI----------VPTGRGEEIMSELISK 199
>gi|212697105|ref|ZP_03305233.1| hypothetical protein ANHYDRO_01670 [Anaerococcus hydrogenalis DSM
7454]
gi|212675880|gb|EEB35487.1| hypothetical protein ANHYDRO_01670 [Anaerococcus hydrogenalis DSM
7454]
Length = 432
Score = 42.6 bits (99), Expect = 0.086, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 20/120 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT-- 150
R +K+ C +YC +C ++S+D + + + + E++ T
Sbjct: 142 TRSYIKIQDGCNMYCSYCL-----IPYARGNIASRDLVSIIDEAKRLRDNGFKEIVLTGI 196
Query: 151 -----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L L+ + V++ + I ++ +R S ++P+ I+ E +Q +K+ K
Sbjct: 197 HVASYGKD-LDLNISLID-VIEHIAKIDGIERIRLSS----MEPRHIDREFLQRMKDTKK 250
>gi|148257167|ref|YP_001241752.1| nitrogenase FeMo cofactor biosynthesis protein NifB [Bradyrhizobium
sp. BTAi1]
gi|146409340|gb|ABQ37846.1| Nitrogenase FeMo cofactor biosynthesis protein NifB [Bradyrhizobium
sp. BTAi1]
Length = 520
Score = 42.6 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 63/213 (29%), Gaps = 26/213 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + + LA Q+
Sbjct: 70 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAAKKVLAVASTIPQM 129
Query: 145 WEVIFTG-GDPL---------------ILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIV 187
+ G GDPL +L L HV + F+ +
Sbjct: 130 TVLGIAGPGDPLANPEKTFKTFELIARTAPDIKLCLSTNGLALPDHVDTIAGFNVDHVTI 189
Query: 188 DPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
++PE+ + ++ + + L GI+ SV++ G
Sbjct: 190 TINMVDPEIGAKIYPWVFWKHKRYTGVEAAKLLTDRQLQGLEMLTERGILCKVNSVMIPG 249
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ND + R + + +
Sbjct: 250 VNDKHLVEV--NRAVKSRGAFLHNIMPLISSPE 280
>gi|310643295|ref|YP_003948053.1| radical sam domain protein [Paenibacillus polymyxa SC2]
gi|309248245|gb|ADO57812.1| Radical SAM domain protein [Paenibacillus polymyxa SC2]
Length = 368
Score = 42.6 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C R E L+ ++ + L I E + V+FTGGD
Sbjct: 14 PFIVIWEVTRACALKCLHC-RAEAQYKPDPRQLTFEEGKKLLDQIAEMNHPL-VVFTGGD 71
Query: 154 PLILSH 159
PL
Sbjct: 72 PLSRPD 77
>gi|152974241|ref|YP_001373758.1| YfkB-like domain-containing protein [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152022993|gb|ABS20763.1| YfkB-like domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 375
Score = 42.6 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 78/230 (33%), Gaps = 43/230 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L + + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEV---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
+S K + + L H + +R +IN L L + P +H +
Sbjct: 90 MSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H----------------PYEFSEEAIAAI--------SRLANAGIILLSQSVLLKGINDD 250
H + + E A + L++AG+I+ ++++L K
Sbjct: 140 HNWGTIDDFVEGGFAMMARKPTYEQRAKLFERMITNSKALSDAGVIVSAETMLNKR--TL 197
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL-TIEEGQKIVASLKE 299
P I + E+ K + +H + S+ + T E + + L
Sbjct: 198 PHIENIHRQIVGEMGCKRHEIHPMYPSDFASNLEILTKAEIRSAIEHLLA 247
>gi|327541062|gb|EGF27613.1| molybdenum cofactor biosynthesis protein A [Rhodopirellula baltica
WH47]
Length = 359
Score = 42.6 bits (99), Expect = 0.088, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + + + C + C +C + VL+ ++ E + ++ + ++ T
Sbjct: 36 RRHDSLRISITDRCNIRCFYCMPEHDADFLPRSGVLTFEEIERLAGLLVKRCGVRDIRIT 95
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
GG+PL+ +++ L I ++ L +
Sbjct: 96 GGEPLVRRDCV--DLIQMLARIDGLEDLSMTTNGM 128
>gi|312876483|ref|ZP_07736466.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796694|gb|EFR13040.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 465
Score = 42.6 bits (99), Expect = 0.088, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 90/242 (37%), Gaps = 39/242 (16%)
Query: 89 IVHRY----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y P IL+ C ++C+ C+ E + L + + + ++ I
Sbjct: 100 LIKKYDINIPYAILIDPTAACNLHCKGCWAGEY---HRAAKLDYEILDRVVKE-AQELGI 155
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ +IF+GG+PL+ L+ + + + I+ E I+ + + G
Sbjct: 156 YFIIFSGGEPLLRKDDILKLC----------EKYEDTVFLSFTNATLIDDEFIEKVAKVG 205
Query: 205 KPVYIAIHANHPYEFSEE---------AIAAISRLANAGIILLSQSVLLKGINDDP---E 252
+ AI + + ++E + A+ +L AG++ + + ++ E
Sbjct: 206 -NLAFAISIDGFEKSTDERRGQGVFKKVVTAMEKLKEAGVVFGFSTTYHRYNVEEVSSDE 264
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYI 310
+ L+ + Y+ A S+ + K + ++ +P ++
Sbjct: 265 YVDFLIEKGAKFGWYFTYVPVGKDAD-ISYMATPEQRAYMYKRIEEIR-----WSKPIFV 318
Query: 311 LD 312
LD
Sbjct: 319 LD 320
>gi|312792636|ref|YP_004025559.1| Radical SAM domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179776|gb|ADQ39946.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 465
Score = 42.6 bits (99), Expect = 0.088, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 90/242 (37%), Gaps = 39/242 (16%)
Query: 89 IVHRY----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y P IL+ C ++C+ C+ E + L + + + ++ I
Sbjct: 100 LIKKYDINIPYAILIDPTAACNLHCKGCWAGEY---HRAAKLDYEILDRVVKE-AQELGI 155
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ +IF+GG+PL+ L+ + + + I+ E I+ + + G
Sbjct: 156 YFIIFSGGEPLLRKDDILKLC----------EKYEDTVFLSFTNATLIDDEFIEKVAKVG 205
Query: 205 KPVYIAIHANHPYEFSEE---------AIAAISRLANAGIILLSQSVLLKGINDDP---E 252
+ AI + + ++E + A+ +L AG++ + + ++ E
Sbjct: 206 -NLAFAISIDGFEKSTDERRGQGVFKKVVTAMEKLKEAGVVFGFSTTYHRYNVEEVSSDE 264
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYI 310
+ L+ + Y+ A S+ + K + ++ +P ++
Sbjct: 265 YVDFLIEKGAKFGWYFTYVPVGKDAD-ISYMATPEQRAYMYKRIEEIR-----WSKPIFV 318
Query: 311 LD 312
LD
Sbjct: 319 LD 320
>gi|304439566|ref|ZP_07399471.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304371945|gb|EFM25546.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 433
Score = 42.6 bits (99), Expect = 0.088, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 21/120 (17%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG- 151
R +K+ C YC +C + + S+ E ++ + ++ E++ TG
Sbjct: 144 TRSYMKVQDGCNRYCTYC-----IIPYARGPIRSRTIEDSVEEAKRLSEAGYKELVLTGI 198
Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D L +RL +++ + + ++ +R S PI I + ++ +K GK
Sbjct: 199 HIGSYGKD---LGDERLVDLIEEITKVDGIERIRLSSIEPIT----ITRDFLERIKATGK 251
>gi|302036912|ref|YP_003797234.1| molybdenum cofactor biosynthesis protein A [Candidatus Nitrospira
defluvii]
gi|300604976|emb|CBK41309.1| Molybdenum cofactor biosynthesis protein A [Candidatus Nitrospira
defluvii]
Length = 354
Score = 42.6 bits (99), Expect = 0.089, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 22/165 (13%)
Query: 101 LLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C++C + + T+L+ ++ A I + + +V TGG+PL+
Sbjct: 28 VTDRCNLRCKYCMPEDDYAWLPRDTILTFEEMAELTA-IFTELGVDKVRLTGGEPLLRRD 86
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGKPVYI 209
L + ++ L + + + S ++ Q R+ L L+
Sbjct: 87 --LPRFVRQLSENRRITEIALTSNGVLMADQAADLSFAGLNRVTISL-DTLRADRFRTL- 142
Query: 210 AIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEI 253
+ + I + AG L +V++KG NDD I
Sbjct: 143 -----TKRDLHHQVFDGIKAVVQAGFPSLKFDTVIIKGYNDDELI 182
>gi|256826835|ref|YP_003150794.1| molybdenum cofactor biosynthesis protein A [Cryptobacterium curtum
DSM 15641]
gi|256582978|gb|ACU94112.1| molybdenum cofactor biosynthesis protein A [Cryptobacterium curtum
DSM 15641]
Length = 337
Score = 42.6 bits (99), Expect = 0.090, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 54/170 (31%), Gaps = 22/170 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C + + T+L + + + + + V TGG+PL+
Sbjct: 16 LTDRCNLRCVYCMPADGILQVPHDTILRYDEIVRFVQ-VAAQRGVQRVRLTGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGKPVYI 209
K + +++ L I+ + + + ++ R+N L +
Sbjct: 73 KGVAGLIERLSAIEGIDDISLTTNGVLLKKMAPELHRAGLRRVNISLDTLDPAQFTQITR 132
Query: 210 AIHANHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
H E + +V ++ ++ D A L
Sbjct: 133 LGHIESVLEGIDAALEVGFD-------PVKINAVAVRSLHQDYLAFAKLS 175
>gi|57642095|ref|YP_184573.1| hypothetical protein TK2160 [Thermococcus kodakarensis KOD1]
gi|57160419|dbj|BAD86349.1| hypothetical protein, conserved, radical SAM superfamily
[Thermococcus kodakarensis KOD1]
Length = 443
Score = 42.6 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 17/154 (11%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR---ILLKLLH 103
I+ ND + +EL L + + V +Y + + L
Sbjct: 51 IDNGTLNDSL-------IKELTTLGFLIPSQLDEKELMRTHVNVLKYTPTHMGMFVNLTS 103
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHK 160
C + C +C++ L++ + I ++ I V+F GG+P +L++
Sbjct: 104 RCNLSCPYCYQDLRKALDSNQDLTTDSWNRIMRLINKRINILRNVNVVFFGGEP-MLNYN 162
Query: 161 RLQKVLKTLRYIKHVQI---LRFHSRVPIVDPQR 191
L+ ++ L +K + I + + + QR
Sbjct: 163 TLKVAVRDLDSLKEIGIKTSMSIITNGTLFSKQR 196
>gi|319948393|ref|ZP_08022534.1| molybdenum cofactor biosynthesis protein A [Dietzia cinnamea P4]
gi|319437947|gb|EFV92926.1| molybdenum cofactor biosynthesis protein A [Dietzia cinnamea P4]
Length = 356
Score = 42.6 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + +++ + + + + EV FTGG+PL+ S
Sbjct: 41 LTEKCSLRCTYCMPEEGLPPIPDAARMTADEVIRLVTLAHRELGVHEVRFTGGEPLMRSD 100
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
L++++ R + S ++
Sbjct: 101 --LERIIAGTREACPDLPIAMTSNGVGLEH 128
>gi|257792682|ref|YP_003183288.1| Radical SAM domain-containing protein [Eggerthella lenta DSM 2243]
gi|257476579|gb|ACV56899.1| Radical SAM domain protein [Eggerthella lenta DSM 2243]
Length = 475
Score = 42.6 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 15/126 (11%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEV 147
+R+ + C CR C+ S L D + + ++ I EV
Sbjct: 90 QNRFVRTAHWSITGKCNYRCRHCY-----MSAPDAKLGEIDHDTMMDLARQIADCGILEV 144
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ +++ L + ++I + ++ + ++ +L+ L+E G
Sbjct: 145 SLTGGEPLVRRD--FMELVDALLSYR-IRIAQIYTNG-----KLVDEKLLDQLEERGIRP 196
Query: 208 YIAIHA 213
+
Sbjct: 197 EFNMSY 202
>gi|258406075|ref|YP_003198817.1| Radical SAM domain-containing protein [Desulfohalobium retbaense
DSM 5692]
gi|257798302|gb|ACV69239.1| Radical SAM domain protein [Desulfohalobium retbaense DSM 5692]
Length = 363
Score = 42.6 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 73/207 (35%), Gaps = 26/207 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I ++ C + C+ C + G L++ + + + + +IFTGG+PL+
Sbjct: 15 IAWEVTRSCNLACKHCRAEAHLDPYPGE-LTTGEAKNLIDTFPQTGSPI-IIFTGGEPLL 72
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L +++ + + LR V + I P+ + + E+G ++I + P
Sbjct: 73 RPD--LFDLVRHAKS----KDLRC---VMAPNGTLITPDNAREMAESGIE-RVSISIDGP 122
Query: 217 YEFSEE-----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
S + A+ I L AGI + + + + + L +
Sbjct: 123 DSASHDAFRGTPGAFDQAMQGIDYLKAAGIPFQINTTVTRNNMGQFKDIFQLAQRL---G 179
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQK 292
+++ + + I +
Sbjct: 180 AVAWHIFLLVPTGRAADLKEEIITAAE 206
>gi|291280509|ref|YP_003497344.1| molybdenum cofactor biosynthesis protein A [Deferribacter
desulfuricans SSM1]
gi|290755211|dbj|BAI81588.1| molybdenum cofactor biosynthesis protein A [Deferribacter
desulfuricans SSM1]
Length = 329
Score = 42.6 bits (99), Expect = 0.094, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + + + C C++C + +LS +D + + + I ++ T
Sbjct: 11 RFYNYLRISVTDRCNFRCKYCMPQHNFKMLSHSDILSYEDIIFVVKTL-TEVGIEKIRIT 69
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
GG+PL+ + + + + L +K+++ L +
Sbjct: 70 GGEPLVRKN--INYLFERLGGLKNIKDLTLTTNGS 102
>gi|271967228|ref|YP_003341424.1| molybdopterin biosynthesis protein A [Streptosporangium roseum DSM
43021]
gi|270510403|gb|ACZ88681.1| molybdopterin biosynthesis, protein A [Streptosporangium roseum DSM
43021]
Length = 331
Score = 42.6 bits (99), Expect = 0.094, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 79/215 (36%), Gaps = 33/215 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVIFTGGDP 154
L C + C +C + L D A ++ E+ I EV +TGG+P
Sbjct: 19 LTDRCNLRCSYCMP-----PEGLEWLPKPDLLTADEIVRLVTVGVERLGITEVRYTGGEP 73
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ + L +++ ++ + + + L L EAG + + +
Sbjct: 74 LLR--RELLEIVARTTALRPGPQVSLTTNGIGL------ARLAAPLAEAGLH-RVNVSLD 124
Query: 215 HPYEFSEEAIAAISRLANAGI-----------ILLSQSVLLKGINDDPEILANLMRTFVE 263
+ + +A RLA+ + +VL++GIND + L+ +E
Sbjct: 125 TLDRETFKRLANRDRLADVLDGLAAADAAGLRPVKVNTVLMRGINDHEAV--ALLHHCLE 182
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+ ++ L A R + +I+A L+
Sbjct: 183 RGYELRFIEQMPLDAQHGWRRENMVTADEILARLR 217
>gi|325002626|ref|ZP_08123738.1| pyrroloquinoline quinone biosynthesis protein PqqE [Pseudonocardia
sp. P1]
Length = 360
Score = 42.6 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 76/220 (34%), Gaps = 24/220 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L +L + CP+ C +C + LS+ D + A + + +GG+PL+
Sbjct: 9 LLAELTYRCPLACAYCSNPIELARYDDE-LSTADWQRVFAE-AADLGVLQCHLSGGEPLL 66
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
L + ++L ++ P + R V +++ A+
Sbjct: 67 RRDLTELVRTAQSLGMYTNLVTSAIGLSRPRAEALR---------AAGLDHVQVSVQADE 117
Query: 216 PYEFSEEA--------IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
P A I A + G L VL + D + L+ R++
Sbjct: 118 PATSDRIAGVRSFERKIEACRLVRELGWPLTVNVVLHRQNIDRIGEIITLVEELQADRVE 177
Query: 268 P----YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
YY + R ++ ++IV + + +++G
Sbjct: 178 LANTQYYGWAWKNRSSLLPSREQLDRAEEIVTAARSRLAG 217
>gi|227872687|ref|ZP_03991017.1| possible 2-methylthioadenine synthetase [Oribacterium sinus F0268]
gi|227841501|gb|EEJ51801.1| possible 2-methylthioadenine synthetase [Oribacterium sinus F0268]
Length = 423
Score = 42.6 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 18/162 (11%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P+ +E+ + + + RY LK+ C YC +C + G
Sbjct: 95 LPEIDEITSVKDYVKRLDHQMARVESGEKYSRY-----LKIAEGCDKYCSYCIIPRLRGH 149
Query: 121 QKGTVLSSKDTEAALAYIQEKSQ-----IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
++ E A A + E + E G D + K L ++L L I ++
Sbjct: 150 Y-RSIPKELVLEEARALVSEGAGELILVAQETTLYGTD--LYKKKALAELLAELSEIPNL 206
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
Q +R P+ I PELI+ +K K Y+ + H
Sbjct: 207 QWIRI----LYCYPEEIEPELIREMKRNPKVCHYLDLPIQHA 244
>gi|119714837|ref|YP_921802.1| molybdenum cofactor biosynthesis protein A [Nocardioides sp. JS614]
gi|119535498|gb|ABL80115.1| GTP cyclohydrolase subunit MoaA [Nocardioides sp. JS614]
Length = 329
Score = 42.6 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 45/220 (20%), Positives = 73/220 (33%), Gaps = 27/220 (12%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + L+ + + E I EV FTGG+PL
Sbjct: 20 LTDRCNLRCNYCMPAEGLDWLPTEQTLTDDEIVRLITIGVEMLGIREVRFTGGEPL---- 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L++ L + H + Q L +A I +
Sbjct: 76 --LRRGLVDIVARTH----ALGVETSLTTNALGLARTAQALADARLD-RINASIDTVRPD 128
Query: 220 SEEAIAAISRLAN--AGI---------ILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ I RL + AG+ + +VLL+G NDD L+R +E +
Sbjct: 129 TFATITRRDRLHDVVAGLEAAKSAGLGPIKLNAVLLRGTNDDQ--APELLRWSIEHGYEL 186
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
++ L A R + +I +L + S P
Sbjct: 187 RFIEQMPLDAQHDWSRAEMVTADEIFDALSTEFS--LTPH 224
>gi|169832193|ref|YP_001718175.1| MiaB-like tRNA modifying protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169639037|gb|ACA60543.1| MiaB-like tRNA modifying enzyme [Candidatus Desulforudis
audaxviator MP104C]
Length = 450
Score = 42.6 bits (99), Expect = 0.096, Method: Composition-based stats.
Identities = 54/372 (14%), Positives = 111/372 (29%), Gaps = 90/372 (24%)
Query: 2 QLRHKTLT-SAQDLYN----ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPI 56
Q+ + + + + L + E+ I +S + I +L+ P+
Sbjct: 59 QVVRRAVRANPEALVVVTGCYAQVAPEEAGAIPGVSLVIGTSGRERIVDLVEQAAARCPV 118
Query: 57 ARQFIPQKEE-------LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
E L + E+ D + G R +K+ C +C
Sbjct: 119 -------PAEKKGPGPFLAVGDIEQAREFEDLPGTADPG-----RTRAFIKVQEGCRDFC 166
Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-------GDPLILSHK 160
+C + L S+ E L + E++ TG D L +
Sbjct: 167 TYC-----IVPYARGPLRSRPPERVLELARGLVDRGYSELVLTGVNLGAYGRD---LGTE 218
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE-- 218
L +++ L I + LR S V+P I EL++ + E A H + P +
Sbjct: 219 NLPGLVRRLVRIPGLARLRLSS----VEPNEITRELVEAVAENP---VCAPHFHIPLQSG 271
Query: 219 ------------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF---VE 263
+ E + + + + ++ G E A +
Sbjct: 272 SDSVLSRMGRRYSTGEFTGLVDMVRARVPEVAVTADVMVGFPG--ETAAEHRESLEYVRR 329
Query: 264 LRIKPYYLHH------------PDLAAGTSHFRLTIEEGQK---IVASLKEKIS----GL 304
+ ++ PD +R+ E ++ + L+++ + G
Sbjct: 330 IGFAGLHVFVYSPRRGTPAASFPDPVP----YRVKKERSREMLALGRELRDRFASRYRGR 385
Query: 305 CQPFYILDLPGG 316
+ + GG
Sbjct: 386 TVEVLVESVSGG 397
>gi|15644078|ref|NP_229127.1| astB/chuR-related protein [Thermotoga maritima MSB8]
gi|4981884|gb|AAD36397.1|AE001787_2 astB/chuR-related protein [Thermotoga maritima MSB8]
Length = 454
Score = 42.6 bits (99), Expect = 0.096, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 62 PQKEELNILPEERE--------DPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110
P EL+ E+ D + + +RY DR L + L H C C
Sbjct: 44 PSSTELSKTEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 103
Query: 111 FCFRREMVGSQKGTVLSSK------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--RL 162
+C+++ + S + D E L Y +K + V F GG+PL+L L
Sbjct: 104 YCYQKVLHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVNL 161
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
LK L V+ F + + + +++ L++AG
Sbjct: 162 SSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 199
>gi|182412773|ref|YP_001817839.1| molybdenum cofactor biosynthesis protein A [Opitutus terrae PB90-1]
gi|177839987|gb|ACB74239.1| molybdenum cofactor biosynthesis protein A [Opitutus terrae PB90-1]
Length = 338
Score = 42.6 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 75/215 (34%), Gaps = 26/215 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G ++S + + Q+ + +V TGG+PL
Sbjct: 19 VTDRCNFRCPYCMPKEVFGPAHAFLRDPQLMSQAEITRIVRAFQQ-LGVTKVRLTGGEPL 77
Query: 156 ILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ + L + LK + + + ++ P L + + ++
Sbjct: 78 LRADVPDLVRSLKQELRVPDL---ALTTNG--WLLEKYAPSLREAGLDRVNVSVDSLQDE 132
Query: 215 HPYEFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ + + I A G+ + V+ +G+ND L+ R +
Sbjct: 133 TAGRMNGLGFKVDRVLRGIDAAAAVGLPVKINCVVQRGVNDG-----ELLELCDYFRARG 187
Query: 269 YYL--HHPDLAAGTSHFRLT-IEEGQKIVASLKEK 300
+ L T+H+ + Q++V+ + +
Sbjct: 188 HTLRFIEFMDVGNTNHWSADRVVPAQEVVSRIAAR 222
>gi|78221243|ref|YP_382990.1| radical SAM family protein [Geobacter metallireducens GS-15]
gi|78192498|gb|ABB30265.1| Radical SAM [Geobacter metallireducens GS-15]
Length = 356
Score = 42.6 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 27/216 (12%), Positives = 64/216 (29%), Gaps = 36/216 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + + C + C C R + ++++ + L I + S+ ++ +GG+
Sbjct: 7 PKWVAWETTQKCNLKCVHC-RCSSDLTSSEGDFTTEEGKKLLKEIADFSKPV-IVLSGGE 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL+ L + +L + + + + E+ Q +++A +
Sbjct: 65 PLMRKDIFELAEYGTSLG-----LRMCMATNGAL-----VTDEICQKMRKADIKMVSLSL 114
Query: 213 ANHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
++ G L S K D L ++
Sbjct: 115 DGSTAAVHDDFRQCPGAFEGVVRAAEIFRRNGQKFLINSSFTKRNQHDIANTFKLAKSL- 173
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Y+ + G++I+ L
Sbjct: 174 --GATAWYMFMI----------VPTGRGEEIMNELI 197
>gi|47220097|emb|CAF99010.1| unnamed protein product [Tetraodon nigroviridis]
Length = 354
Score = 42.6 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKS 142
+ G H Y L C + C++C + V + + +LS+ + LA + +
Sbjct: 11 TDTFGRRHNYLRVSL---TEKCNLRCQYCMPEDGVKLTPRSQLLSTSEILK-LAGLFVQE 66
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ ++ TGG+PLI +++ LR ++ ++ + +
Sbjct: 67 GVDKIRLTGGEPLIRPDVL--EIITKLRTLEGLKTIAVTTNGI 107
>gi|296127653|ref|YP_003634905.1| biotin and thiamin synthesis associated [Brachyspira murdochii DSM
12563]
gi|296019469|gb|ADG72706.1| biotin and thiamin synthesis associated [Brachyspira murdochii DSM
12563]
Length = 474
Score = 42.6 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 53/148 (35%), Gaps = 13/148 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L L + C C +C G L+ + A + +Q + TG DP S
Sbjct: 94 LYLSNYCINGCVYCPYHAKNGHIARKQLTQDEIRAEVTALQNMGHKRLALETGEDPDYAS 153
Query: 159 HKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR-------INPELIQCLKEAGKPV 207
+ L + +KT+ IKH ++ + + V+ R L Q + K
Sbjct: 154 MEYLLESIKTIYSIKHKNGAIRRVNVNIAATTVENYRKLKDAGIGTYVLFQ--ETYHKHT 211
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGI 235
Y +H + P E A+ R GI
Sbjct: 212 YEKVHPSGPKSNYEYHTEAMDRAMEGGI 239
>gi|227503855|ref|ZP_03933904.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
striatum ATCC 6940]
gi|227199478|gb|EEI79526.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
striatum ATCC 6940]
Length = 338
Score = 42.6 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 87/226 (38%), Gaps = 22/226 (9%)
Query: 89 IVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y R + L C + C +C E + LS +T + EK I
Sbjct: 5 LLDKYGRRARDLRVSLTDRCNLRCTYCMPAEGLEWFPTTETLSDDETIRLIRIGVEKLGI 64
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV---DPQRIN-------P 194
+V FTGG+PL+ K L+K++ + ++ + + + +RI+
Sbjct: 65 RQVRFTGGEPLLR--KSLEKIVAATKQLRTDEGKSPSTALTTNGLGLDRRIDGLVEAGLD 122
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEI 253
+ L + +Y + + ++ +I AG+ + +V++ G+N+D
Sbjct: 123 RVNISLDTTDRELYARLTR---RDRIQDVFTSIEAATRAGLHPVKVNAVVMPGVNEDS-- 177
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
+ L +E + ++ L R + + I+ L+
Sbjct: 178 IVPLAEYCIEAGTQLRFIEQMPLGPRDKWRRENMVTAEDILERLRA 223
>gi|159037574|ref|YP_001536827.1| radical SAM domain-containing protein [Salinispora arenicola
CNS-205]
gi|157916409|gb|ABV97836.1| Radical SAM domain protein [Salinispora arenicola CNS-205]
Length = 601
Score = 42.6 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 3/102 (2%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+ PL R IL C + C +C+ + G LS+ A +
Sbjct: 2 YRPLFADDRRPVSVILKLRGETCNIDCLYCYEKRKEAP-GGARLSADGAAQLTAIFGARP 60
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
V GG+PL + ++L L +V + S
Sbjct: 61 VA--VELHGGEPLTIGRAAFAEILDRLAAQPNVVRVSMQSNG 100
>gi|317131836|ref|YP_004091150.1| molybdenum cofactor biosynthesis protein A [Ethanoligenens
harbinense YUAN-3]
gi|315469815|gb|ADU26419.1| molybdenum cofactor biosynthesis protein A [Ethanoligenens
harbinense YUAN-3]
Length = 324
Score = 42.6 bits (99), Expect = 0.098, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQI 144
++ + R D + + + C + CR+C + + L ++ +A ++ I
Sbjct: 1 MENMEKRVVDYLRVSITDRCNLRCRYCMPDKGISLVPHSETLRYEELLRVVA-CAARAGI 59
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++ TGG+PL+ L L+ LR IK ++ + +
Sbjct: 60 QKIKVTGGEPLVRR-GVLG-FLEKLRGIKGIRQVTMTTNGI 98
>gi|253681883|ref|ZP_04862680.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
gi|253561595|gb|EES91047.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
Length = 444
Score = 42.6 bits (99), Expect = 0.098, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTG 151
+++ C +C +C + + S+ ++ + +E S + E+I G
Sbjct: 144 KHVAYIRISEGCDNFCTYC-----IIPKIRGKYRSRSIDSIVKEAKELSAMGVKELILVG 198
Query: 152 GDPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D I S +L +++ + I+ ++ +R P+ I ELI+ +K K
Sbjct: 199 QDTAIYGRDIYSENKLPDLIRAISEIESIEWIRV----LYTYPEEITDELIEEIKNNDKV 254
Query: 207 V-YIAIHANH 215
Y+ I H
Sbjct: 255 CNYLDIPIQH 264
>gi|325295010|ref|YP_004281524.1| molybdenum cofactor biosynthesis protein A [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065458|gb|ADY73465.1| molybdenum cofactor biosynthesis protein A [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 324
Score = 42.6 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 24/174 (13%)
Query: 101 LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C CR+C +L ++ + + I V TGG+PL+
Sbjct: 11 VTDRCNFRCRYCMPEGTKKFIPHSEILRYEEITEIVRVF-TEFGIDSVRLTGGEPLVR-- 67
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYE 218
K ++ ++ +R ++ ++ + + E ++ LKE G V I+I P +
Sbjct: 68 KGIESLIVQIRELEEIRDISLTTNGF------FLSEKVKSLKEHGLNRVNISIDTLEPEK 121
Query: 219 F-----SEEAIAAISRLA------NAGI-ILLSQSVLLKGIND-DPEILANLMR 259
F + + L G+ + +VL+KG ND + E L
Sbjct: 122 FGFITGTGDTRTLSRVLHGLEKAIEEGLNPVKVNTVLIKGFNDKEIESFVKLSE 175
>gi|283851219|ref|ZP_06368502.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
gi|283573388|gb|EFC21365.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
Length = 364
Score = 42.6 bits (99), Expect = 0.100, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
P ++ G Y + + +VC CRFC + G+ LS+
Sbjct: 34 APLHDLCAAAMDDRLARHGRNAYYVHNVHVNFTNVCVNACRFCAFSKTKGAPGARTLSAA 93
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
D A L + + I E+ GG + L+ L LR I
Sbjct: 94 DIVADLD-ARGDAPIREIHVVGG---LNPELPLEYYLDMLRAI 132
>gi|119872955|ref|YP_930962.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM
4184]
gi|119674363|gb|ABL88619.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184]
Length = 266
Score = 42.6 bits (99), Expect = 0.100, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 67/184 (36%), Gaps = 38/184 (20%)
Query: 93 YPD-RILLKLLHVCPVYCRFCFRREMV---------GSQKGTVLSSKDTEAALAYIQEKS 142
YP R C C +C RR G + L+ + ++ ++E+
Sbjct: 10 YPRLRSAYIQFDGCNYVCPWCIRRLTPWDHHLPDAGGLKTRRHLTLGELVEVVSGLRERG 69
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ E + GG+P + L +V+KTL + +R + I+ EL+ L+
Sbjct: 70 AV-EAVLGGGEPTV--DPELSQVVKTLAGL----RVRILTNGFS-----ISEELLGVLRS 117
Query: 203 AGKPVYIAIHANHPYEFSEE------------AIAAISRLANAGIILLSQSVLLKGINDD 250
+ +A I RL AG+ + ++VL+ G+ND
Sbjct: 118 CPACEVVV----SVKTLDPARHLAYTGKPLGPVLANIKRLIEAGVAVKFETVLIPGLNDV 173
Query: 251 PEIL 254
++
Sbjct: 174 EDVE 177
>gi|254293796|ref|YP_003059819.1| molybdenum cofactor biosynthesis protein A [Hirschia baltica ATCC
49814]
gi|254042327|gb|ACT59122.1| molybdenum cofactor biosynthesis protein A [Hirschia baltica ATCC
49814]
Length = 359
Score = 42.6 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ R+ I + C + C +C M K VLS ++ + + I
Sbjct: 33 LQDRFNRTISYLRLSITDRCDLRCTYCMPERMQFLPKSDVLSFEELTRLVDAFIAR-GIT 91
Query: 146 EVIFTGGDPLILSH--KRLQKVLKTLRY 171
++ TGG+PL+ + L K + L
Sbjct: 92 KLRVTGGEPLVRKDAIRLLSKFAERLGS 119
>gi|163852070|ref|YP_001640113.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
extorquens PA1]
gi|163663675|gb|ABY31042.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
extorquens PA1]
Length = 344
Score = 42.6 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 56/167 (33%), Gaps = 15/167 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
+ C C +C +M K +L+ ++ + + ++ TGG+PL+
Sbjct: 32 VTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRRDI 90
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L + L + L + + R PEL + L V + P +F
Sbjct: 91 MHLFRRLSRHLKSGTLDELTLTTNGSQL--ARFAPELAE-LGVRRINVSLDT--LDPDKF 145
Query: 220 SEEAIA--------AISRLANAGIILLSQSVLLKGINDDPEILANLM 258
I AGI + +V LKG+N+D
Sbjct: 146 RAITRRGDLSVVLAGIEAARAAGIKVKINAVALKGVNEDEIADMIAW 192
>gi|34498973|ref|NP_903188.1| molybdenum cofactor biosynthesis protein A [Chromobacterium
violaceum ATCC 12472]
gi|34104822|gb|AAQ61179.1| molybdenum cofactor biosynthesis protein A [Chromobacterium
violaceum ATCC 12472]
Length = 324
Score = 42.6 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 14/158 (8%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C + + L+ + E +A V TGG+PL+ +
Sbjct: 17 VTDRCDLRCSYCLPKGFKHFEEPENWLTFDEIERVVAAFAR-LGTRRVRLTGGEPLLRRN 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHPYE 218
L ++ L + + L + + Q + + + + E
Sbjct: 76 --LPQLAARLSALPGLDDLSLTTNGTQLSRQ---AAELHAAGVRRINLSLDSLRRDCVEE 130
Query: 219 FS-----EEAIAAISRLANAG-IILLSQSVLLKGINDD 250
+ + + + AG + V ++G+N+
Sbjct: 131 ITGSDSLPKVLDGLMAAKKAGFAPIKINMVAMRGVNEQ 168
>gi|268576935|ref|XP_002643449.1| Hypothetical protein CBG16084 [Caenorhabditis briggsae]
Length = 562
Score = 42.6 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 9/126 (7%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKD 130
+E E G + H Y L C C +C E V K +L +++
Sbjct: 56 QEIEHQKGQPPFYDMFMREHSYLRISL---TEKCNFRCLYCMPAEGVPLKPKDKMLKNEE 112
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ + I +V TGG+P I + ++++ + V+ + + ++
Sbjct: 113 VLRLVKLFADH-GIDKVRLTGGEPTIRKD--IVQIVEGIASTPGVKDVGITTNGLVL--P 167
Query: 191 RINPEL 196
R P+L
Sbjct: 168 RFLPDL 173
>gi|218530828|ref|YP_002421644.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
chloromethanicum CM4]
gi|240139398|ref|YP_002963873.1| molybdenum biosynthetic protein A [Methylobacterium extorquens AM1]
gi|218523131|gb|ACK83716.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
chloromethanicum CM4]
gi|240009370|gb|ACS40596.1| molybdenum biosynthetic protein A [Methylobacterium extorquens AM1]
Length = 344
Score = 42.6 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 56/167 (33%), Gaps = 15/167 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
+ C C +C +M K +L+ ++ + + ++ TGG+PL+
Sbjct: 32 VTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRRDI 90
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L + L + L + + R PEL + L V + P +F
Sbjct: 91 MHLFRRLSRHLKSGTLDELTLTTNGSQL--ARFAPELAE-LGVRRINVSLDT--LDPDKF 145
Query: 220 SEEAIA--------AISRLANAGIILLSQSVLLKGINDDPEILANLM 258
I AGI + +V LKG+N+D
Sbjct: 146 RAITRRGDLSVVLAGIEAARAAGIKVKINAVALKGVNEDEIADMIAW 192
>gi|253579936|ref|ZP_04857204.1| molybdenum cofactor biosynthesis protein A [Ruminococcus sp.
5_1_39B_FAA]
gi|251848935|gb|EES76897.1| molybdenum cofactor biosynthesis protein A [Ruminococcus sp.
5_1_39BFAA]
Length = 324
Score = 42.6 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 7/106 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y I L C + C +C E V S +L+ + I
Sbjct: 1 MIDKYGREIDYLRISLTDRCNLRCIYCMPEEGVKSLSHAEILTYDEILRICR-CAADLGI 59
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
++ TGG+PL+ K + K ++ I ++ + + ++ Q
Sbjct: 60 RKIKLTGGEPLVR--KGCASLAKQIKAIPGIEKVTLTTNGILLAEQ 103
>gi|170741762|ref|YP_001770417.1| nitrogenase cofactor biosynthesis protein NifB [Methylobacterium
sp. 4-46]
gi|168196036|gb|ACA17983.1| nitrogenase cofactor biosynthesis protein NifB [Methylobacterium
sp. 4-46]
Length = 498
Score = 42.6 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 79/247 (31%), Gaps = 29/247 (11%)
Query: 71 PEEREDPIGDN-NHSPLKGIV-HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQK 122
P+E + + D P H Y R+ + + C + C +C R+ G
Sbjct: 41 PDEMPEDVWDKIKDHPCYSEEAHHYFARMHVAVAPACNIQCNYCNRKYDCANESRPGVVS 100
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLI---------------LSHKRLQKVL 166
+ + + E Q+ + G GD + +L
Sbjct: 101 EKLTPDQALRKVVTVANEVPQLSVLGIAGPGDSCYDWKKTKATFDAVSREIPDIKLCLST 160
Query: 167 KTLRYIKHV-QILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEEAI 224
L HV +I + V ++PE+ + E +
Sbjct: 161 NGLALPDHVDEIAEMNVDHVTVTINMVDPEIGAKIYPWIFHQHKRYTGVEAARILHERQM 220
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA-GTSHF 283
++ L + GI++ SV++ GIND+ + N E + + A +HF
Sbjct: 221 LSLEMLRDRGILVKVNSVMIPGINDEHLLDVNAWVK--ERGAFLHNVMPLISAPEHGTHF 278
Query: 284 RLTIEEG 290
LT + G
Sbjct: 279 GLTGQRG 285
>gi|307545567|ref|YP_003898046.1| molybdenum cofactor biosynthesis protein A [Halomonas elongata DSM
2581]
gi|307217591|emb|CBV42861.1| molybdenum cofactor biosynthesis protein A [Halomonas elongata DSM
2581]
Length = 330
Score = 42.6 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 46/138 (33%), Gaps = 16/138 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + + C C +C EM + VL+ ++ + + ++ TGG+PL+
Sbjct: 16 VRISVTDRCDFRCVYCMSEEMTFLPREQVLTLEELSLVARAF-TELGVEKIRLTGGEPLV 74
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ +++ + + ++ + + L+E G + I
Sbjct: 75 RRD--IDRLVADIGSLPGLKDFAMTTNGAGLGKY------ASLLREGGLQ-RLNISI--- 122
Query: 217 YEFSEEAIAAISRLANAG 234
E RL G
Sbjct: 123 DSLDPE---RFRRLTRTG 137
>gi|170750295|ref|YP_001756555.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
radiotolerans JCM 2831]
gi|170656817|gb|ACB25872.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
radiotolerans JCM 2831]
Length = 350
Score = 42.6 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 13/194 (6%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIV--HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
L+ + D P I R + + + C + C +C M K
Sbjct: 1 MLDDSSLTPQASAVDAPAGPAPLIDPFQRAISYLRISVTDRCDLRCAYCMSEHMEFLPKR 60
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHS 182
+L+ ++ + + + ++ TGG+PL+ L + L ++ L +
Sbjct: 61 DLLTLEELDRLCGVFIAR-GVRKLRITGGEPLVRRDIMHLFRRLSRHLDSGALEELTLTT 119
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHPYEFS-----EEAIAAISRLANAGII 236
+ R EL L V + + E + + + I+ AG+
Sbjct: 120 NGTQL--TRYADELAS-LGVRRINVSLDTLDPDKFREITRRGDLKVVLDGIAAARAAGMK 176
Query: 237 LLSQSVLLKGINDD 250
+ +V L+ +N D
Sbjct: 177 VKINAVALRDVNAD 190
>gi|220929654|ref|YP_002506563.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum
H10]
gi|219999982|gb|ACL76583.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum
H10]
Length = 454
Score = 42.6 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 18/132 (13%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEV 147
++ R LK+ C +C +C + + S+ + + ++ +S E+
Sbjct: 159 TYKERTRAYLKIQEGCSQFCSYC-----IIPYARGPIRSRKPDDIIEEVKHLAESGFLEI 213
Query: 148 IFTGGDPLIL-------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+ TG + L L ++K I ++ +R S P + + L
Sbjct: 214 VLTG---IHLASFGREIKDTNLLDIIKKTHSIDGIKRIRLGSLEPTTITEEFVDA-VGRL 269
Query: 201 KEAGKPVYIAIH 212
+ ++++
Sbjct: 270 PKLCPHFHLSLQ 281
>gi|313114194|ref|ZP_07799746.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623603|gb|EFQ07006.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 487
Score = 42.6 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + ++S + + A+ ++ E S EV F GG+PL
Sbjct: 107 LHVAHTCNLNCSYCFASQGRYQGDRALMSFEVGKRAMDFLIENSGTRRNLEVDFFGGEPL 166
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ K+L + I H + RF + I+ ++I + V +
Sbjct: 167 MNFDMVKKLVAYCREQEKI-HNKNFRFT---MTTNGMLIDDDVIDFCNKECHNVVL 218
>gi|295100532|emb|CBK98077.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Faecalibacterium
prausnitzii L2-6]
Length = 483
Score = 42.6 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + ++S + + A+ ++ E S EV F GG+PL
Sbjct: 103 LHVAHTCNLNCSYCFASQGRYQGDRALMSFEVGKRAMDFLIENSGTRRNLEVDFFGGEPL 162
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ K+L + I H + RF + I+ ++I + V +
Sbjct: 163 MNFDMVKKLVAYCREQEKI-HNKNFRFT---MTTNGMLIDDDVIDFCNKECHNVVL 214
>gi|291563947|emb|CBL42763.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium
SS3/4]
Length = 441
Score = 42.6 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 32/152 (21%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
D G N + L R +K+ C +C +C G + +D E +
Sbjct: 124 DLAGSNEYEKLHINKQAEHTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRRP--EDVEEEV 181
Query: 136 AYIQEKSQIWEVIFTGG--------------DPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ E+ E++ TG D L L ++ L I ++ +RF
Sbjct: 182 KILAEEGY-KEIVLTGIHLTSYGIDFKDEGIDFLTL--------IRRLHEIDGIERIRFG 232
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
S ++P+ I E L K I H
Sbjct: 233 S----LEPRVITEEFASELSRLPK---ICPHF 257
>gi|332977049|gb|EGK13857.1| molybdenum cofactor biosynthesis protein A [Psychrobacter sp.
1501(2011)]
Length = 449
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C G + L+ + E + + +V TGG+P I
Sbjct: 143 ITDFCNFRCGYCLPNGYQGKRPDNELTLPEIEVLIKAFAQ-VGTKKVRLTGGEPSIRKD- 200
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
+ ++++ ++ ++ + S
Sbjct: 201 -VTEIIRLIKATPGIETVAMTSNG 223
>gi|315924411|ref|ZP_07920633.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622290|gb|EFV02249.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 432
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 16/141 (11%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+E + D + + HR R LK+ C +C +C +
Sbjct: 114 QEDHHRQVYVSDISEQHIFEDMPIAEHRRHTRAFLKVQDGCNQFCTYC-----IVPYARG 168
Query: 125 VLSSKDTEAALAYIQ--EKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHV 175
+ S+ ++ +Q E + + G D + L +++ + I V
Sbjct: 169 RIRSRRIDSVCEEVQLLASDGFKEFVLSGIHIASYGKD--MPGGPDLLTLIRAVDAIPGV 226
Query: 176 QILRFHSRVPIVDPQRINPEL 196
+R S P++ + L
Sbjct: 227 ARIRLGSIEPLLMTETFVAGL 247
>gi|158455134|gb|AAI26848.1| Molybdenum cofactor synthesis 1 [Bos taurus]
gi|296474490|gb|DAA16605.1| molybdenum cofactor biosynthesis protein 1 isoform b [Bos taurus]
Length = 382
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K + ++
Sbjct: 63 GRHHSYLRISL---TERCNLRCQYCMPEEGVPLTPKADLLTTEEILTLARLFVKEGVDKI 119
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ LR ++ ++ + +
Sbjct: 120 RLTGGEPLIRPDVV--DIVAQLRQLEGLRTIGITTNGI 155
>gi|284165007|ref|YP_003403286.1| radical SAM protein [Haloterrigena turkmenica DSM 5511]
gi|284014662|gb|ADB60613.1| Radical SAM domain protein [Haloterrigena turkmenica DSM 5511]
Length = 380
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 28/208 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C + +++ + L E V+ +GGD
Sbjct: 12 PMVLIWELTQACGLACDHCRADARPNRHPDELPTAEG-KRLLEDAAEFGDGQLVVLSGGD 70
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211
PL+ + L L + RI LK + A
Sbjct: 71 PLVRDDVEELIAHGDDLG-----LRMTITPSGTGSLTADRIRAMADAGLKRMAVSIDGAT 125
Query: 212 HANHPYEFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+H EF EE I A+ AG+ + + + + + + +L+R E+
Sbjct: 126 PESH-DEFRGETGSFEETIRAVEDAKAAGLPVQVNTTVCRQTVGELPEIRDLLR---EIG 181
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
+ + F + I G+ +
Sbjct: 182 AVMWSVF----------FLVPIGRGRIL 199
>gi|282861894|ref|ZP_06270957.1| molybdenum cofactor biosynthesis protein A [Streptomyces sp. ACTE]
gi|282562919|gb|EFB68458.1| molybdenum cofactor biosynthesis protein A [Streptomyces sp. ACTE]
Length = 329
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 77/208 (37%), Gaps = 15/208 (7%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + K +L+ ++ + I EV FTGG+PL+
Sbjct: 17 LTDRCNLRCTYCMPEEGLQWLAKPDLLTDEEIVRLVRVAVTSLGITEVRFTGGEPLLRP- 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHS------RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L V++ ++ + + R + L V+ +
Sbjct: 76 -GLVSVVERCAALEPRPRMSLTTNGIGLKRTAAALKTAGLDRVNVSLDTLRPDVFKTLTR 134
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+ ++ + + +AG+ + SVL+ G+NDD L+ V+ + ++
Sbjct: 135 ---RDRHKDVLDGLRAARDAGLTPVKVNSVLMPGLNDD--EAPELLAWAVDHGYELRFIE 189
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L A R + I+ASL+ +
Sbjct: 190 QMPLDAQHGWKRDGMITAGDILASLRTR 217
>gi|126460321|ref|YP_001056599.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM
11548]
gi|126250042|gb|ABO09133.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548]
Length = 378
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 75/202 (37%), Gaps = 23/202 (11%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-IF 149
H P + + CP+ C+ C R + + LS+++ + + + E + I
Sbjct: 12 HEAPLLVFWESTKACPLACKHC-RADAILKPLPGELSTEEGKRLIEQVAEFGDPKPLLII 70
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
TGGDPL+ + L +++ + + + ++ E ++ +K +G
Sbjct: 71 TGGDPLMRAD--LFELVDYANSLG------VPVSLAPAVSKSLDDEALRRIKSSGVKSIS 122
Query: 210 A----IHANHPYEFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
A E E ++AI R + GI + +V+ K + +A L+R
Sbjct: 123 ISLDGATAETHDELRGVPGSFAETVSAIKRALDLGISVQVNTVVWKKSLSELPDVAYLLR 182
Query: 260 TFVELRIKPYYLHHPDLAAGTS 281
+K + + +
Sbjct: 183 RL---GVKVWEVFFLIVTGRAK 201
>gi|89900261|ref|YP_522732.1| molybdenum cofactor biosynthesis protein A [Rhodoferax
ferrireducens T118]
gi|89344998|gb|ABD69201.1| GTP cyclohydrolase subunit MoaA [Rhodoferax ferrireducens T118]
Length = 388
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ +LS ++ + ++ TGG+PL
Sbjct: 54 VTDRCNFRCNYCMPKEIFDKDYAYLPHKALLSFEEITRIAKVFVAH-GVQKIRLTGGEPL 112
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + ++++++ L +
Sbjct: 113 LRKN--IERLIEQLAAL 127
>gi|224047046|ref|XP_002186662.1| PREDICTED: molybdenum cofactor synthesis 1 [Taeniopygia guttata]
Length = 755
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 9/124 (7%)
Query: 66 ELNILPEEREDPIGDNNHSPL----KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
EL ER S G H Y L C + C++C E V
Sbjct: 98 ELQSSGRERFVLEHAAPFSAFLMDSFGRQHNYLRISL---TEKCNLRCQYCMPEEGVQLT 154
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ L + LA + K + ++ TGG+PLI ++ L ++ ++ +
Sbjct: 155 PKSELLTTQEIITLARLFVKEGVDKIRLTGGEPLIRPDVV--DIVGELYKLEGLKTIAVT 212
Query: 182 SRVP 185
+
Sbjct: 213 TNGI 216
>gi|116751423|ref|YP_848110.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116700487|gb|ABK19675.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 362
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 82/236 (34%), Gaps = 37/236 (15%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQIWE 146
+ HR P L + C + C C+ G + G + L E ++
Sbjct: 23 VEHRIPLFGAFDLTYRCNLNCIHCYLGPHDGDHETLGPEAGAARIRDLLRQAAEAGCLY- 81
Query: 147 VIFTGGDPLILSH-KRLQKVLKTLRYI------------KHVQILR----FHSRVPIVDP 189
V+ +GG+PL+ + + + ++L I +H++I R + V +
Sbjct: 82 VLLSGGEPLLRPDFESIYRYARSLGLIVTVFTNACLIDARHIEIFREVPPYLVEVSVYGA 141
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
R E I + + + + I RL + GI ++++++
Sbjct: 142 TRGTFEKITRVPGSFER----------------CLRGIGRLVDGGIRTGLKTMIMRSNVQ 185
Query: 250 DPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ + L + F R+ P D R+ ++ + KE+IS
Sbjct: 186 EIPAVEALAKHFGTGFRLDPVVCPRLDGTPAPLVERVDPRRAVELELAEKERISSY 241
>gi|163783468|ref|ZP_02178459.1| Radical SAM [Hydrogenivirga sp. 128-5-R1-1]
gi|159881232|gb|EDP74745.1| Radical SAM [Hydrogenivirga sp. 128-5-R1-1]
Length = 362
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 76/208 (36%), Gaps = 39/208 (18%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
D + P G++ ++ L + C +YC+ C+ + LS + +
Sbjct: 14 DEPYRPFPGVI------LIWNLTNRCNLYCKHCYSSAN--QETKGELSLDEIRKVADDL- 64
Query: 140 EKSQIWEVIFTGGDPLI----------LSHKRLQKVLKT---LRYIKHVQILRFHSRVPI 186
++ I +GG+PL+ L K ++ L T L +V+++R S +
Sbjct: 65 VNEKVRFAILSGGEPLLREDIYDVSAILREKGIKTYLSTNGLLINRDNVKLIR-ESFDYV 123
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
PE+ + H +E +A+ AI GI + + L
Sbjct: 124 GISIDGTPEVHDLFRGRR----------HAFE---DALNAIRLCLREGIKVGMRFTLSPQ 170
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHP 274
++ + +L R E+ + Y+ H
Sbjct: 171 TSESLPFILDLSR---EIEVPKLYISHL 195
>gi|222102888|ref|YP_002539927.1| molybdenum cofactor biosynthesis protein A [Agrobacterium vitis S4]
gi|221739489|gb|ACM40222.1| molybdenum cofactor biosynthesis protein A [Agrobacterium vitis S4]
Length = 342
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 88 GIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQ 143
G++ R+ R+ + C + C +C M K VLS + E A+A+I+
Sbjct: 13 GLIDRFGRRVTYLRLSVTDRCDLRCMYCMPENMTFMPKRDVLSIDELERLAVAFIRS--G 70
Query: 144 IWEVIFTGGDPLI 156
+ + TGG+PL+
Sbjct: 71 VTRIRLTGGEPLV 83
>gi|171317149|ref|ZP_02906351.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MEX-5]
gi|171097716|gb|EDT42546.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MEX-5]
Length = 370
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R++ +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRDVFDKNYPFLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLARL 116
>gi|170700217|ref|ZP_02891233.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
IOP40-10]
gi|170134850|gb|EDT03162.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
IOP40-10]
Length = 370
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R++ +L+ ++ E + ++ TGG+PL
Sbjct: 43 VTDRCNFRCVYCMPRDVFDKNYPFLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPL 101
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + L+ +++ L +
Sbjct: 102 LRKN--LEFLIERLARL 116
>gi|160940560|ref|ZP_02087904.1| hypothetical protein CLOBOL_05455 [Clostridium bolteae ATCC
BAA-613]
gi|158436520|gb|EDP14287.1| hypothetical protein CLOBOL_05455 [Clostridium bolteae ATCC
BAA-613]
Length = 355
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C++C + + +LS ++ A+ I + TGG+PL+
Sbjct: 19 ITDRCNLRCKYCMPYGVECVPRWDILSLEEI-QAVGICAAGLGIRHIKVTGGEPLVRRDC 77
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+++K L+ ++ + + V +R +L +
Sbjct: 78 C--QLVKQLKSTPGIEKVTITTNG--VLLERYLDDLAEA 112
>gi|197303019|ref|ZP_03168067.1| hypothetical protein RUMLAC_01746 [Ruminococcus lactaris ATCC
29176]
gi|197297874|gb|EDY32426.1| hypothetical protein RUMLAC_01746 [Ruminococcus lactaris ATCC
29176]
Length = 440
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 75/195 (38%), Gaps = 27/195 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQI-WEVIFTGG 152
LK+ C +C +C ++ G+ + + + E A ++E + E G
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKVRGNYRSVPMERLVNEARELAEQGVKELILVAQETTLYGK 205
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI 211
D + K L K++K L I ++ +R P+ I ELIQ +KE K Y+ +
Sbjct: 206 D--LYGEKSLHKLVKELCNISGIRWIRI----LYCYPEEITDELIQVMKEEPKVCHYLDL 259
Query: 212 HANHPYEFS----------EEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMR- 259
H + +E + + +L + + ++ L+ G + E LM+
Sbjct: 260 PIQHANDTILKRMGRRTTKQELVHIVEKLRSEIPDICLRTTLITGFPGETAEQHEELMQF 319
Query: 260 ----TFVELRIKPYY 270
F L + Y
Sbjct: 320 VDEMEFDRLGVFTYS 334
>gi|223940707|ref|ZP_03632546.1| molybdenum cofactor biosynthesis protein A [bacterium Ellin514]
gi|223890634|gb|EEF57156.1| molybdenum cofactor biosynthesis protein A [bacterium Ellin514]
Length = 352
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 77/231 (33%), Gaps = 44/231 (19%)
Query: 101 LLHVCPVYCRFCFRREMVGS---------------------QKGTVLSSKDTEAALAYIQ 139
+ C C +C K +L+ ++ E + I
Sbjct: 22 ITDRCNFRCMYCLPETEAAQNFYRGRWANLPNANPIKWQWQPKSKLLTFEEIERVVR-IA 80
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ I ++ TGG+PL+ +++++ + + ++ L + + PE +
Sbjct: 81 AELGIQKIRLTGGEPLLRKD--VEQLVSLIAKVPGIEDLAMTTNGFLF------PEKGKA 132
Query: 200 LKEAGKPVY---------IAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIND 249
L++AG + E + +I G+ + +V+++GIND
Sbjct: 133 LRDAGLKRISFSLDSLDRANFQKMTGRDGLTEVLESIRFAQELGMNPVKVNAVIIRGIND 192
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAG-TSHFRLTIEEGQKIVASLKE 299
+L ++ D A F + G++I+ L+
Sbjct: 193 HEIEALAAFARERDLSMRFIEFMPLDSAHAWKKEFVMP---GREILERLQR 240
>gi|296132944|ref|YP_003640191.1| MiaB-like tRNA modifying enzyme YliG [Thermincola sp. JR]
gi|296031522|gb|ADG82290.1| MiaB-like tRNA modifying enzyme YliG [Thermincola potens JR]
Length = 439
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 63/188 (33%), Gaps = 28/188 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P +K+ C C +C + G + + ++ + EVI D
Sbjct: 144 PYTAYVKIAEGCDNRCSYCAIPGIRGGY-RSRPKESILQEVNDLVRR--GVKEVILIAQD 200
Query: 154 PLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207
L ++++ + + V +R P RI +LIQ ++ K
Sbjct: 201 TTRYGTDIYGRYALAELIQEIASLP-VHWIRI----LYAYPTRITDDLIQIIRGEPKVCK 255
Query: 208 YIAIHANH-----PYEFS-----EEAIAAISRLANA--GIILLSQSVLLKGINDDPEILA 255
Y+ + H + EE + ++RL GI L + L+ G + E
Sbjct: 256 YLDMPIQHVDKDIIKAMNRQGDREEIMKLVNRLRKEIPGITLR--TTLIVGFPGETEAQF 313
Query: 256 NLMRTFVE 263
+ FV
Sbjct: 314 QNLLEFVR 321
>gi|300775377|ref|ZP_07085239.1| anaerobic ribonucleoside-triphosphate reductase small subunit
[Chryseobacterium gleum ATCC 35910]
gi|300506117|gb|EFK37253.1| anaerobic ribonucleoside-triphosphate reductase small subunit
[Chryseobacterium gleum ATCC 35910]
Length = 209
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 6/114 (5%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
KEE +L E + P+ ++ ++ H L C V C +C +E +
Sbjct: 3 KEEDILLKEGKMLPVMEHFYTLQGEGAHTGKA-AYFIRLGGCDVGCHWCDVKESWDPELH 61
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
++++++ A ++ TGG+PL+ + L LK L H++
Sbjct: 62 PLMNAEEIAETAA-----RHCKTIVLTGGEPLMWNLDILTSKLKELGCTIHIET 110
>gi|154244069|ref|YP_001415027.1| nitrogenase cofactor biosynthesis protein NifB [Xanthobacter
autotrophicus Py2]
gi|154158154|gb|ABS65370.1| nitrogenase cofactor biosynthesis protein NifB [Xanthobacter
autotrophicus Py2]
Length = 520
Score = 42.2 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 63/213 (29%), Gaps = 26/213 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + + LA Q+
Sbjct: 70 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPQQAAKKVLAVASTIPQM 129
Query: 145 WEVIFTG-GDPL---------------ILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIV 187
+ G GDPL +L L HV + F+ +
Sbjct: 130 TVLGIAGPGDPLANPEKTFQTFELINRTAPDIKLCLSTNGLALPDHVDTIAGFNVDHVTI 189
Query: 188 DPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
++PE+ + ++ + + L GI+ SV++ G
Sbjct: 190 TINMVDPEVGAKIYPWVFWKHKRYTGYEAAKLLTDRQMLGLEMLTERGILCKVNSVMIPG 249
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
IND + R + + A
Sbjct: 250 INDKHLVEV--NRAVKSRGAFLHNIMPLISAPE 280
>gi|300312938|ref|YP_003777030.1| molybdenum cofactor biosynthesis enzyme A protein [Herbaspirillum
seropedicae SmR1]
gi|300075723|gb|ADJ65122.1| molybdenum cofactor biosynthesis enzyme A protein [Herbaspirillum
seropedicae SmR1]
Length = 333
Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 58/185 (31%), Gaps = 25/185 (13%)
Query: 81 NNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALA 136
+ P + R+ RI + C + C +C + G + L + +A
Sbjct: 3 ASTHPPAVLQDRFGRRISYLRISVTDRCDLRCSYCLPKGHTGFEEPQNWLRFDEISRVVA 62
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP------- 189
V TGG+PL+ + L + L + V L + +
Sbjct: 63 AFARLGAGR-VRLTGGEPLLR--RGLATLAAQLSALPGVDELSLSTNATQLHKHAASLRA 119
Query: 190 ---QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLK 245
QRIN L + + ++ + AG + VLL+
Sbjct: 120 AGVQRINVSLDSLDRACSASITGRDSL-------ASVMSGLEAAKAAGFAPIKINMVLLR 172
Query: 246 GINDD 250
G+N+
Sbjct: 173 GVNEQ 177
>gi|229493358|ref|ZP_04387147.1| molybdenum cofactor biosynthesis protein A [Rhodococcus
erythropolis SK121]
gi|229319674|gb|EEN85506.1| molybdenum cofactor biosynthesis protein A [Rhodococcus
erythropolis SK121]
Length = 353
Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +LS+ + + E+ I EV FTGG+PL+ S
Sbjct: 43 ITEKCSLRCTYCMPEEGLPAIAAEDLLSADEIIRVVGIGVERVGIREVRFTGGEPLMRSD 102
Query: 160 --KRLQKVLKTLRYIK 173
K + + I
Sbjct: 103 LEKIIGGCAARVPGIP 118
>gi|302389477|ref|YP_003825298.1| RNA modification enzyme, MiaB family [Thermosediminibacter oceani
DSM 16646]
gi|302200105|gb|ADL07675.1| RNA modification enzyme, MiaB family [Thermosediminibacter oceani
DSM 16646]
Length = 441
Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 47/116 (40%), Gaps = 12/116 (10%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
HR R LK+ C ++C +C + G + L + + E++ T
Sbjct: 146 HRQRTRAFLKIQEGCNMFCSYCIIPYVRGPVRSRTL--ESIIREAENLAGD-GFKEIVLT 202
Query: 151 GGD-PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
G L + + L V++ L I+ ++ +R S ++ ++ +LI+ L
Sbjct: 203 GIHLGLYGADFKGGPTLYDVIERLSRIEGIKRIRLSS----IEAMELSDDLIKKLA 254
>gi|256545382|ref|ZP_05472745.1| Fe-S oxidoreductase [Anaerococcus vaginalis ATCC 51170]
gi|256398943|gb|EEU12557.1| Fe-S oxidoreductase [Anaerococcus vaginalis ATCC 51170]
Length = 432
Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 20/120 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT-- 150
R +K+ C +YC +C ++S+D + + + + E++ T
Sbjct: 142 TRAYIKIQDGCNMYCSYCL-----IPYARGNIASRDLVSIIDEAKRLRDNGYKEIVLTGI 196
Query: 151 -----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + L V++ + I ++ +R S ++P+ I+ E ++ +K+ K
Sbjct: 197 HVASYGKDFDL--DISLIDVIEHIAKIDGIERIRLSS----MEPRHIDREFLKRMKDTKK 250
>gi|260589077|ref|ZP_05854990.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
gi|331082507|ref|ZP_08331632.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
6_1_63FAA]
gi|260540497|gb|EEX21066.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
gi|330400485|gb|EGG80115.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
6_1_63FAA]
Length = 434
Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 19/126 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C V + + + E L + E + TG
Sbjct: 143 HTRAYLKVQDGCNQFCSYCI-IPYVRGRVRSRRKEEVLEEVLRLTKN--GYQEFVLTG-- 197
Query: 154 PLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ LS L +++K + I+ V+ +R S ++P+ I E Q L K
Sbjct: 198 -IHLSSYGVDCEDNLLELIKAVHEIEGVKRIRLGS----LEPRIITEEFAQALGNMPK-- 250
Query: 208 YIAIHA 213
I H
Sbjct: 251 -ICPHF 255
>gi|218777950|ref|YP_002429268.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218759334|gb|ACL01800.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 298
Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 78/234 (33%), Gaps = 46/234 (19%)
Query: 95 DRILLKLLHVC-PVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+ ILL+ C C FC ++ + K D A Y + + + V G
Sbjct: 24 NSILLQATLGCSHSKCTFCGAYKDKRFAIKDRKHLESDLRFARHYCKRQDR---VFVMDG 80
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
D I+ K + +L +R + V+ ++ + + + + E ++ L + G K V++
Sbjct: 81 DAFIMPMKHWKWLLGEIRDKLPWVRRTTCYANLKSIMLK--SDEDLKWLYDNGLKAVFLG 138
Query: 211 IHANHPYEF-------SEE-AIAAISRLANAGIILLS-------QSVLLKGINDDPEILA 255
+ + H + E I RL +GI L+S Q+ L E
Sbjct: 139 LESGHAQVRKDIRKGGTPEELIHHCKRLRKSGIKLVSIVLLGLGQTHL------SMEHAR 192
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK-----------IVASLK 298
R E+ + + E + I+ L+
Sbjct: 193 ETGRALSEIDPEAVSALSLMPLRN-----TPLGEAYEKGEFDMPDPLGIIRELR 241
>gi|239815326|ref|YP_002944236.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus
S110]
gi|239801903|gb|ACS18970.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus
S110]
Length = 383
Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +++ +LS ++ + ++ TGG+PL
Sbjct: 49 VTDRCNFRCSYCMPKDVFDKDYQYLPHSALLSFEEMTRLARLFAAH-GVRKIRLTGGEPL 107
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + ++ ++ L I
Sbjct: 108 LRKN--IEALIAQLSEI 122
>gi|261490661|ref|NP_001159769.1| molybdenum cofactor biosynthesis protein 1 isoform a [Bos taurus]
gi|226707542|sp|Q1JQD7|MOCS1_BOVIN RecName: Full=Molybdenum cofactor biosynthesis protein 1; Includes:
RecName: Full=Molybdenum cofactor biosynthesis protein
A; Includes: RecName: Full=Molybdenum cofactor
biosynthesis protein C
gi|296474489|gb|DAA16604.1| molybdenum cofactor biosynthesis protein 1 isoform a [Bos taurus]
Length = 633
Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K + ++
Sbjct: 63 GRHHSYLRISL---TERCNLRCQYCMPEEGVPLTPKADLLTTEEILTLARLFVKEGVDKI 119
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ LR ++ ++ + +
Sbjct: 120 RLTGGEPLIRPDVV--DIVAQLRQLEGLRTIGITTNGI 155
>gi|224418140|ref|ZP_03656146.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT
98-5491]
gi|253827467|ref|ZP_04870352.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT
98-5491]
gi|313141675|ref|ZP_07803868.1| tRNA modifying enzyme [Helicobacter canadensis MIT 98-5491]
gi|253510873|gb|EES89532.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT
98-5491]
gi|313130706|gb|EFR48323.1| tRNA modifying enzyme [Helicobacter canadensis MIT 98-5491]
Length = 423
Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 18/129 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C C +C + G + + + E I TG
Sbjct: 133 KSRAFIKIQEGCDFACSYCIIPSVRGK--ARSFEKNKIINQITKLTQN-GFSEFILTGTN 189
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D S++ L +L+++ I V+ LR S ++P +I + + L
Sbjct: 190 MGSWGKD----SNENLTSLLESICAIPEVKRLRLGS----LEPSQITQDFLDFLDHPKIE 241
Query: 207 VYIAIHANH 215
++ I H
Sbjct: 242 RHLHIALQH 250
>gi|194039216|ref|XP_001928743.1| PREDICTED: molybdenum cofactor biosynthesis protein 1 [Sus scrofa]
Length = 637
Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 15/134 (11%)
Query: 62 PQKEELN----ILPEEREDPIGDNNH------SPLKGIVHRYPDRILLKLLHVCPVYCRF 111
P+ E + P R + ++ + G H Y L C + C++
Sbjct: 30 PRPGERSQPALEEPSRRRQFLREHAAPFSAFLTDGFGRQHSYLRISL---TEKCNLRCQY 86
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
C E V L + + LA + K + ++ TGG+PLI ++ L
Sbjct: 87 CMPEEGVPLTPRADLLTTEEILTLARLFVKEGVDKIRLTGGEPLIRPDVV--DIVARLHQ 144
Query: 172 IKHVQILRFHSRVP 185
++ ++ + +
Sbjct: 145 LEGLRTIGITTNGI 158
>gi|77464364|ref|YP_353868.1| pyrroloquinoline quinone biosynthesis protein PqqE [Rhodobacter
sphaeroides 2.4.1]
gi|77388782|gb|ABA79967.1| probable Coenzyme PQQ synthesis protein E [Rhodobacter sphaeroides
2.4.1]
Length = 380
Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 79/236 (33%), Gaps = 39/236 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L +L H CP+ C +C + LS++D + + + + + F+GG+PL+
Sbjct: 23 VLAELTHRCPLQCPYCS-NPVELEAASRELSTEDWQRVIGELAALGVLQ-IHFSGGEPLV 80
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L L + H ++ I + L EAG
Sbjct: 81 RRD------LVAL--VAHADRAGLYTN-LITSAVMFTRAKVAELAEAGLAHVQV------ 125
Query: 217 YEFSEEAIAAISRL-----------------ANAGIILLSQSVLLKGINDDPEILANLMR 259
+ R+ G+ L +V+ + D+ + +
Sbjct: 126 -SLQGASAPVAERIGGFRGGHAKKIEAAAWVRAEGMALTLNAVMHRQNLDELPRIVEMAV 184
Query: 260 TFVELRIKPYYL-HHPDLAAGTSHFRLTIE---EGQKIVASLKEKISGLCQPFYIL 311
R++ ++ ++ + T+ E +IV + ++SG+ Y++
Sbjct: 185 EMGAQRLEVAHVQYYGWALKNRAALMPTLAQLDEATRIVEEAQARLSGVLAIDYVI 240
>gi|330836389|ref|YP_004411030.1| Radical SAM domain-containing protein [Spirochaeta coccoides DSM
17374]
gi|329748292|gb|AEC01648.1| Radical SAM domain protein [Spirochaeta coccoides DSM 17374]
Length = 310
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP + + + C + C+ C+ + T LS KD + + Y+++ +I E+ GG
Sbjct: 8 YPQKFNVLITSKCNLRCKHCYL-----DPRQTELSVKDFSSIIDYLKK-IKIKELCIEGG 61
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+PL H+ ++ +L ++ ++ + + + E++ + + V +
Sbjct: 62 EPLC--HQYFDQICSSLLNLR-------CNKKIVTNATLLTEEIVYLIDKTFDTVQV 109
>gi|119509291|ref|ZP_01628441.1| nitrogen fixation protein [Nodularia spumigena CCY9414]
gi|119466133|gb|EAW47020.1| nitrogen fixation protein [Nodularia spumigena CCY9414]
Length = 445
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 74/226 (32%), Gaps = 29/226 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + AL + Q+
Sbjct: 20 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAHKALVIAGKIPQM 79
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI----------VDPQRIN 193
V G GDPL K + +++ + + ++ +
Sbjct: 80 TVVGIAGPGDPLANPEKTFRTFELIADKAPDIKLC-LSTNGLMLPEYIDRIKQLNIDHVT 138
Query: 194 PELIQCLKEAGKPVYIAIHANH--------PYEFSEEAIAAISRLANAGIILLSQSVLLK 245
L E G +Y +H E+ + + L A I+ SV++
Sbjct: 139 ITLNTIDPEIGAQIYSWVHYKRKRYRGVEGAKILLEKQMEGLQALREADILCKVNSVMIP 198
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAA-GTSHFRLTIEEG 290
GIND I N M E + + A +HF LT + G
Sbjct: 199 GINDQHLIEVNKMIR--ENGAFLHNIMPLISAPEHGTHFGLTGQRG 242
>gi|312126807|ref|YP_003991681.1| Radical SAM domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311776826|gb|ADQ06312.1| Radical SAM domain protein [Caldicellulosiruptor hydrothermalis
108]
Length = 465
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 89/242 (36%), Gaps = 39/242 (16%)
Query: 89 IVHRY----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y P IL+ C ++C+ C+ E K L + + + ++ I
Sbjct: 100 LIKKYDINIPYAILIDPTAACNLHCKGCWAGEY---HKAAKLDYEILDRVVKE-AQELGI 155
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ +IF+GG+PL+ L+ + + + I+ + I + + G
Sbjct: 156 YFIIFSGGEPLLRKDDILKLC----------EKYEDTVFLSFTNATLIDDDFIDKVAKVG 205
Query: 205 KPVYIAIHANHPYEFSEE---------AIAAISRLANAGIILLSQSVLLKGINDDP---E 252
+ AI + + ++E + A+ +L AG++ + + ++ E
Sbjct: 206 -NLAFAISIDGFEKSTDERRGQGVFKKVVTAMEKLKEAGVVFGFSTTYHRYNVEEVSSDE 264
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYI 310
+ L+ + Y+ A S+ + K + ++ +P ++
Sbjct: 265 YIDFLIEKGAKFGWYFTYVPVGKDAD-ISYMATPEQRAYMYKRIEEIR-----WSKPIFV 318
Query: 311 LD 312
LD
Sbjct: 319 LD 320
>gi|108760706|ref|YP_629733.1| putative tRNA modifying protein [Myxococcus xanthus DK 1622]
gi|123248036|sp|Q1DC90|RIMO_MYXXD RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|108464586|gb|ABF89771.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Myxococcus xanthus
DK 1622]
Length = 476
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 95/258 (36%), Gaps = 45/258 (17%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ IP + ++ ++P + +Y LK+ C C FC +
Sbjct: 125 RQVIPDPDYIHDA------------NTPRINSMPKY--TAYLKISEGCDNACAFCIIPTL 170
Query: 118 VGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLIL------SHKRLQKVLKTL 169
G Q+ + +A ++ S + E+ D L +L +LK L
Sbjct: 171 RGGQRSRP-----IDDIVAEAKQLADSGVQELNLVAQD-LTAYGHDLPGRPKLHDLLKAL 224
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEF--------- 219
+ V+ +R H P+ ELI+ + K Y+ + H +
Sbjct: 225 VQVD-VKWIRLH----YAYPRIFPDELIEVMASEPKIARYLDMPVQHVSDKLLLSMKRGR 279
Query: 220 -SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPDLA 277
SE +++L L+ ++ L+ G+ + E +++ FV+ R + +
Sbjct: 280 NSEFLKGLLTKLRERVPGLVMRTSLIVGLPGETEEDFEMLKEFVKTQRFERLGVFQYSDE 339
Query: 278 AGTSHFRLTIEEGQKIVA 295
GT+ + L + QK++
Sbjct: 340 EGTAAYDLPDKVPQKLIE 357
>gi|332993820|gb|AEF03875.1| molybdenum cofactor biosynthesis protein A [Alteromonas sp. SN2]
Length = 322
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 64/193 (33%), Gaps = 23/193 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C++C G LS + L+ +V TGG+P L
Sbjct: 17 VTEACNFRCQYCLPDGYQGPSSEHFLSLGEINTLLSAFSG-LGTSKVRLTGGEP-TLRRD 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
L +L ++ + + R+ + V ++I + P +F+
Sbjct: 75 FLD-ILSATANTPGIKRVAMTTHG-----GRMAEHAAAWKQAGLHQVNVSIDSLDPRQFA 128
Query: 221 E--------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL- 271
+ +A + AG+ + SVLL +D A L R L+ P L
Sbjct: 129 AITGQDKLKQVLAGLDAAVEAGLDVKVNSVLLNDFSD-----ARLNRFLDWLKTMPVTLR 183
Query: 272 -HHPDLAAGTSHF 283
T+HF
Sbjct: 184 FIELMETGDTTHF 196
>gi|182418337|ref|ZP_02949632.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237666343|ref|ZP_04526328.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182377719|gb|EDT75263.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237657542|gb|EEP55097.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 466
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 70/214 (32%), Gaps = 42/214 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SKD E ++ I+ + E+I +G
Sbjct: 173 KTRAFLKIQDGCNRFCAYCL-----IPYTRGAVCSKDPEKVISEIKKLAEHGFKEIILSG 227
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D + L +L+ + + ++ +R S P +I+ +K +
Sbjct: 228 IHTASYGVD--LEGDVSLMTILEEIEKVDGIERVRIGSIEPCF----FTDSVIEKMK-SM 280
Query: 205 KPVYIAIHAN----------------HPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
K + H + E+ E L +A I + ++ G
Sbjct: 281 KKLCPQFHLSLQSGCDATLKRMNRRYTAKEYEEAVYKIRKNLKDASIT----TDVIVGFP 336
Query: 249 DDPEILANL-MRTFVELRIKPYYLHHPDLAAGTS 281
+ + NL L++ ++ GT
Sbjct: 337 GETDEEFNLTYEYLKNLKLTKTHIFKFSPRKGTK 370
>gi|91774915|ref|YP_544671.1| GTP cyclohydrolase subunit MoaA [Methylobacillus flagellatus KT]
gi|91708902|gb|ABE48830.1| GTP cyclohydrolase subunit MoaA [Methylobacillus flagellatus KT]
Length = 329
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C L+ ++ E + + + V TGG+PL+
Sbjct: 23 VTDRCDLRCHYCMPVGFSDYEIPDNWLTFEEIERVVNAFAK-LGVNAVRVTGGEPLLRKD 81
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ L I + + +
Sbjct: 82 --LATLISNLSRINGLSDISLSTNGT 105
>gi|15678091|ref|NP_275205.1| molybdenum cofactor biosynthesis A (MoaA) related protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621099|gb|AAB84569.1| molybdenum cofactor biosynthesis A (MoaA) related protein
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 250
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ H I+ L C CR+CF S + I++++ + V+
Sbjct: 29 LSHISVSDIITVLTPTCNFRCRYCF----FKPSGCMNHSPDRIADLIQRIRDETGVERVL 84
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
GG+P + L ++ + L HV I +R ++ +
Sbjct: 85 IAGGEPTLQED--LPELTEILAGDFHVTISPNGTRRDVLWMSTFHE 128
>gi|160947755|ref|ZP_02094922.1| hypothetical protein PEPMIC_01690 [Parvimonas micra ATCC 33270]
gi|158446889|gb|EDP23884.1| hypothetical protein PEPMIC_01690 [Parvimonas micra ATCC 33270]
Length = 443
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R +K+ C ++C +C G + E A+ + EVI T
Sbjct: 149 KTRAYIKIQEGCNMFCTYCIIPYARGP-IKSRPIDDIYEEAVK--LANNGYKEVIITGIH 205
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + + RL V++ L I+++ +R S ++ I+ + + LK K
Sbjct: 206 VGSYGLD--LGNDTRLIDVIEKLSTIENLDRIRLSS----IEAGIISEDFLIRLKNCKK 258
>gi|78221558|ref|YP_383305.1| radical SAM:molybdenum cofactor synthesis-like [Geobacter
metallireducens GS-15]
gi|78192813|gb|ABB30580.1| GTP cyclohydrolase subunit MoaA [Geobacter metallireducens GS-15]
Length = 326
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 13/122 (10%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQI 144
++ Y RI + C + CR+C V G +LS +D I
Sbjct: 3 LIDTYGRRITYLRLSVTDRCNLRCRYCMPAAGVEKLGHGDILSYEDLFRIAR-AAVAVGI 61
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
++ TGG+PL+ K + L L + ++ L + ++ PE+ L+ AG
Sbjct: 62 EKIRVTGGEPLVR--KGIVPFLARLAKLPGLRELVLTTNGFLL------PEMAGELRRAG 113
Query: 205 KP 206
Sbjct: 114 VQ 115
>gi|304313911|ref|YP_003849058.1| molybdopterin cofactor biosynthesis protein A [Methanothermobacter
marburgensis str. Marburg]
gi|313104133|sp|Q50746|MOAA_METTM RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|302587370|gb|ADL57745.1| predicted molybdopterin cofactor biosynthesis protein A
[Methanothermobacter marburgensis str. Marburg]
Length = 305
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HR P L + + C V C +C R ++ S + +S +D E + + ++
Sbjct: 7 HRRPLVSLRISVTGRCNVSCIYCHRDGILRSDEE--MSPEDIENICR-VASDLGVKKIRL 63
Query: 150 TGGDPLILSHKRLQKVLKTLRYI 172
+GG+PLI + ++++ + I
Sbjct: 64 SGGEPLIRDD--IVEIVEKINSI 84
>gi|332026222|gb|EGI66364.1| Molybdenum cofactor biosynthesis protein 1 [Acromyrmex echinatior]
Length = 571
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 50/130 (38%), Gaps = 10/130 (7%)
Query: 65 EELNILPEEREDPIGDNNH---SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-S 120
EE+ ++ + ++ H + G H Y L C + C +C E V +
Sbjct: 25 EEMPSRLQQLRAKLREDEHEILTDTFGRKHTYLRISL---TERCNLRCTYCMPAEGVKLT 81
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+K +L + + + + ++ TGG+P I + ++ L+ ++ + +
Sbjct: 82 KKEGILRTNEIIQIADLFVK-EGVRKIRLTGGEPTIRKD--IIDIVGQLKQLRDLDQVAI 138
Query: 181 HSRVPIVDPQ 190
+ + Q
Sbjct: 139 TTNGLTLTRQ 148
>gi|291301726|ref|YP_003513004.1| MiaB-like tRNA modifying enzyme YliG [Stackebrandtia nassauensis
DSM 44728]
gi|290570946|gb|ADD43911.1| MiaB-like tRNA modifying enzyme YliG [Stackebrandtia nassauensis
DSM 44728]
Length = 479
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 48/142 (33%), Gaps = 19/142 (13%)
Query: 99 LKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
LK+ C C FC FR V G +L+ A ++ G D
Sbjct: 184 LKIASGCDRRCAFCAIPSFRGAFVSRDPGEILAEAQWLAEQGVVEVTLVSENTTSYGKD- 242
Query: 155 LILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
LS L+K+L L + ++ +R + P + P L++ + Y +
Sbjct: 243 --LSDAAALEKLLPQLAAVDGIERVRV----SYLQPAELRPSLVETIATTPGVAPYFDLS 296
Query: 213 ANHPYEFSEEAIAAISRLANAG 234
H + + R+ G
Sbjct: 297 FQH------SSRDLLRRMRRFG 312
>gi|94986650|ref|YP_594583.1| Fe-S oxidoreductases [Lawsonia intracellularis PHE/MN1-00]
gi|94730899|emb|CAJ54262.1| predicted Fe-S oxidoreductases [Lawsonia intracellularis
PHE/MN1-00]
Length = 437
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 71/213 (33%), Gaps = 40/213 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
I ++ C + C+ C + G S+++ +A + ++ +IFTGG+P
Sbjct: 73 IAWEVTRSCNLACKHCRAEAHMDPYPGE-FSTEEAKALIDTF---PEVGNPIIIFTGGEP 128
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--H 212
++ + + L + LR V + I PE +K++G
Sbjct: 129 MMRAD------VYELMAYATSKGLRC---VMSPNGTLITPETAHAIKKSGVQRCSISLDG 179
Query: 213 ANH---------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
N P F E ++ I L + G+ + + K +D + + L
Sbjct: 180 YNAESHDSFRMVPGAF-EASLRGIQYLKDEGVEFQINTTVTKSNLNDFKKIFKLCDEL-- 236
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+++ + + +I
Sbjct: 237 -GASAWHIFLL----------VPMGRAAEIAEQ 258
>gi|297195245|ref|ZP_06912643.1| radical SAM domain-containing protein [Streptomyces
pristinaespiralis ATCC 25486]
gi|297152723|gb|EDY63581.2| radical SAM domain-containing protein [Streptomyces
pristinaespiralis ATCC 25486]
Length = 729
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 18/127 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY----IQEKSQIW----- 145
+I++K+ C + C C+ E Q ++ A+++ + E ++
Sbjct: 10 QQIVVKVHSRCDLACDHCYIYEHA-DQSWRTRPKAISDEAISWTALRLAEHAKSHALPSV 68
Query: 146 EVIFTGGDPLILSHKRLQKVLKTL-RYIKHV--QILRFHSRVPIVDPQRINPELIQCLKE 202
VI GG+PL+ +RL++V + ++ V LR H+ R+N + E
Sbjct: 69 SVILHGGEPLLAGPERLRRVCEEFTAALEPVAALDLRIHTNGI-----RLNDRFLDLFDE 123
Query: 203 AGKPVYI 209
V I
Sbjct: 124 FDVRVGI 130
>gi|269127512|ref|YP_003300882.1| MiaB-like tRNA modifying enzyme YliG [Thermomonospora curvata DSM
43183]
gi|268312470|gb|ACY98844.1| MiaB-like tRNA modifying enzyme YliG [Thermomonospora curvata DSM
43183]
Length = 484
Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 61/190 (32%), Gaps = 44/190 (23%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFC----F 113
IP EL P G S + + R LKL C C FC F
Sbjct: 147 AIPGHGEL---------PEGLAPASGPRVLRRRLEGGPVAPLKLASGCDRRCTFCAIPAF 197
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKR-LQKV 165
R V VL+ A + + EV+ G D L R L+K+
Sbjct: 198 RGAYVSRDPQEVLAEAAWLA-------ERGVREVVLVSENSTSYGKD---LGDLRALEKL 247
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL-KEAGKPVYIAIHANHPYEFSEEAI 224
L L I ++ +R + P + P LI+ L G Y + H +
Sbjct: 248 LPQLAAIDGIERVRL----SYLQPAELRPGLIEVLCTTPGVAPYFDLSFQHA------SG 297
Query: 225 AAISRLANAG 234
+ R+ G
Sbjct: 298 PVLRRMRRFG 307
>gi|289548187|ref|YP_003473175.1| nitrogenase cofactor biosynthesis protein NifB [Thermocrinis albus
DSM 14484]
gi|289181804|gb|ADC89048.1| nitrogenase cofactor biosynthesis protein NifB [Thermocrinis albus
DSM 14484]
Length = 472
Score = 42.2 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 65/207 (31%), Gaps = 28/207 (13%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + + LA E Q+
Sbjct: 38 HHFYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAKKVLAVAMEIPQL 97
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRIN 193
V G GDPL + + +++ + ++D +
Sbjct: 98 TVVGIAGPGDPLANPERTFRTFELIKEKAPDIKLC-LSTNGLVLDKYINKIKDLEIDHVT 156
Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA--------ISRLANAGIILLSQSVLLK 245
+ + +Y I NH +EA + GI++ +V +
Sbjct: 157 ITINAVSVDTASKIYPWIFYNHRRYRDKEAAKILLEKQYEGLQACVENGILVKVNTVFVP 216
Query: 246 GINDDPEILANLMRTFVELRIKPYYLH 272
IN E + L + + + +
Sbjct: 217 EING--EEIPELSKKVRSMGAFLHNIM 241
>gi|239623774|ref|ZP_04666805.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521805|gb|EEQ61671.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 448
Score = 42.2 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 41/251 (16%), Positives = 77/251 (30%), Gaps = 40/251 (15%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
+G+ + +V LK+ C C +C + G + +
Sbjct: 126 SFHDLGELPDTQAGRVVTTGGYYAFLKIAEGCDKRCTYCIIPYLRGPY--RSVPMEQLLE 183
Query: 134 ALAYIQEKSQIWEVIFTGGDP-LILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ + E+I + L K L K+L L I +Q +R
Sbjct: 184 EARQLAS-GGVKELILVAQETTLYGKDIYGGKSLPKLLHELAQIPGIQWIRIQ----YCY 238
Query: 189 PQRINPELIQCLKEAGKP-VYIAIHANHP----------YEFSEEAIAAISRLANAGIIL 237
P+ I ELI+ ++ K Y+ I H EE I++L +
Sbjct: 239 PEEITDELIEAIRSEEKVCHYLDIPIQHASNRILKRMGRRTNREELTERIAKLRKEIPDI 298
Query: 238 LSQSVLLKGINDDPEILANLMRTFV------ELRIKPYYL-------HHPDLAAGTSHFR 284
++ ++ G + + + FV L + Y +PD
Sbjct: 299 ALRTTMISGFPGETQADHEELMDFVNEMEFERLGVFAYSAEEDTPAYSYPDQVPQ----E 354
Query: 285 LTIEEGQKIVA 295
+ E +I+
Sbjct: 355 VKEERRDEIME 365
>gi|210621258|ref|ZP_03292564.1| hypothetical protein CLOHIR_00507 [Clostridium hiranonis DSM 13275]
gi|210154869|gb|EEA85875.1| hypothetical protein CLOHIR_00507 [Clostridium hiranonis DSM 13275]
Length = 349
Score = 42.2 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 43/244 (17%), Positives = 81/244 (33%), Gaps = 39/244 (15%)
Query: 45 NLINPHNPNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIV-HRYPDRILL 99
NLI+ N Q + KEE L I ++ D + + I R R L+
Sbjct: 3 NLIDKLEKN-----QIL-SKEEFVRLLAISEKDDIDYLTERAKCVRDDIYGKRVFIRGLI 56
Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
++ + C C +C R + + LS + + + + GG+
Sbjct: 57 EISNYCKNDCYYCGIRRSNKNAQRYRLSKEQILSCCEN-GYELGFRTFVMQGGEDAFFKD 115
Query: 160 KRLQKVLKTLRYIKHVQILRF-HSRVPIVDPQRINPELIQCLKEA------GKPVYIAIH 212
+ ++ +++ R+ V + +R + + + IH
Sbjct: 116 DVVCDIVSSIKE-------RYPDCAVTLSLGERSTESYRKMKEAGADRYLLRHETFDNIH 168
Query: 213 AN--HPYEFSEEAIAAISR----LA---NAGIILLS--QSVLLKGINDDPEILANLMRTF 261
N HP E E R L GI++ S Q+ L+ I +D + L
Sbjct: 169 YNKLHPVELDPENRKRCLRDLKALRYQTGTGIMVGSPYQT--LENIAEDLLFIKELNPEM 226
Query: 262 VELR 265
+ +
Sbjct: 227 IGIG 230
>gi|188588968|ref|YP_001921205.1| thiamine biosynthesis protein ThiH [Clostridium botulinum E3 str.
Alaska E43]
gi|188499249|gb|ACD52385.1| putative thiazole biosynthesis protein [Clostridium botulinum E3
str. Alaska E43]
Length = 472
Score = 42.2 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E IL E D H K I + Y +RI++ + C C +C
Sbjct: 49 SHREAAILLECDLDEEIQKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQ 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
L+ ++ + + +Q+ + TG DP+ + + + +KT+ IKH
Sbjct: 109 NKHISRKKLTQEEIKREVIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + V+ R
Sbjct: 169 AIRRANVNIAATTVENYR 186
>gi|302872581|ref|YP_003841217.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
gi|302575440|gb|ADL43231.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 465
Score = 42.2 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 89/242 (36%), Gaps = 39/242 (16%)
Query: 89 IVHRY----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y P IL+ C ++C+ C+ E K L + + + ++ I
Sbjct: 100 LIKKYDINIPYAILIDPTAACNLHCKGCWAGEY---HKAAKLDYEVLDRVVKE-AQELGI 155
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ +IF+GG+PL+ L+ + + + I+ + I + + G
Sbjct: 156 YFIIFSGGEPLLRKDDILKLC----------EKYEDTVFLSFTNATLIDDDFIDKVAKVG 205
Query: 205 KPVYIAIHANHPYEFSEE---------AIAAISRLANAGIILLSQSVLLKGINDDP---E 252
+ AI + + ++E + A+ +L AG++ + + ++ E
Sbjct: 206 -NLAFAISIDGFEKSTDERRGQGVFKKVVTAMEKLKEAGVVFGFSTTYHRYNVEEVSSDE 264
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYI 310
+ L+ + Y+ A S+ + K + ++ +P ++
Sbjct: 265 YVDFLIEKGAKFGWYFTYVPVGKDAD-ISYMATPEQRAYMYKRIEEIR-----WSKPIFV 318
Query: 311 LD 312
LD
Sbjct: 319 LD 320
>gi|148657495|ref|YP_001277700.1| radical SAM domain-containing protein [Roseiflexus sp. RS-1]
gi|148569605|gb|ABQ91750.1| Radical SAM domain protein [Roseiflexus sp. RS-1]
Length = 800
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
Query: 90 VHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+H PDR + + + C + C C+ G ++ + D + +
Sbjct: 444 LHTPPDRLVNAYIHITYACNLTCAHCYAEA--GPRRREAMPVGDVLRLAEE-AARLGFQK 500
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLKEAGK 205
V+ TGG+PL+ + +L+ L ++ + R R + P + P+LI L A
Sbjct: 501 VVITGGEPLMHPQR--DALLEGLAALRPLLRPTRLALRTNLAYP--LTPKLIAALVHAAD 556
Query: 206 PVYI 209
V +
Sbjct: 557 QVIV 560
>gi|61888840|ref|NP_001013615.1| molybdenum cofactor biosynthesis protein 1 isoform b [Bos taurus]
gi|61553596|gb|AAX46428.1| molybdenum cofactor synthesis-step 1 protein isoform 1 [Bos taurus]
Length = 382
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K + ++
Sbjct: 63 GRRHSYLRISL---TERCNLRCQYCMPEEGVPLTPKADLLTTEEILTLARLFVKEGVDKI 119
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ LR ++ ++ + +
Sbjct: 120 RLTGGEPLIRPDVV--DIVAQLRQLEGLRTIGITTNGI 155
>gi|291550943|emb|CBL27205.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus
torques L2-14]
Length = 440
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 64/175 (36%), Gaps = 21/175 (12%)
Query: 97 ILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152
LK+ C +C +C R S L + + A ++E + E G
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFRSVPMERLLKEAQDLAEQGVKELILVAQETTLYGK 205
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI 211
D + K L K+L+ L I ++ +R P+ I ELIQ +KE K Y+ +
Sbjct: 206 D--LYGEKSLPKLLRELCKISGIRWIRI----LYCYPEEITDELIQVMKEESKICHYLDL 259
Query: 212 HANHPYEFS----------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
H + +E I + +L + ++ L+ G + +
Sbjct: 260 PIQHANDTILKRMGRRTSKQELIDIVQKLRKEIPDICLRTTLITGFPGETQEQHE 314
>gi|262201214|ref|YP_003272422.1| molybdenum cofactor biosynthesis protein A [Gordonia bronchialis
DSM 43247]
gi|262084561|gb|ACY20529.1| molybdenum cofactor biosynthesis protein A [Gordonia bronchialis
DSM 43247]
Length = 365
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +LS+ + L + + FTGG+PL+
Sbjct: 46 VTDRCNLRCTYCMPAEGLDWMDSAELLSTDELVRVLTVAVRDLGVHRIRFTGGEPLLRRD 105
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
L++++ + + L +
Sbjct: 106 --LEEIIARMAALPQRPELAMTTNGL 129
>gi|222445702|ref|ZP_03608217.1| hypothetical protein METSMIALI_01343 [Methanobrevibacter smithii
DSM 2375]
gi|261349749|ref|ZP_05975166.1| putative molybdenum cofactor biosynthesis protein A
[Methanobrevibacter smithii DSM 2374]
gi|222435267|gb|EEE42432.1| hypothetical protein METSMIALI_01343 [Methanobrevibacter smithii
DSM 2375]
gi|288861704|gb|EFC94002.1| putative molybdenum cofactor biosynthesis protein A
[Methanobrevibacter smithii DSM 2374]
Length = 309
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 27/197 (13%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+Y IL + + C C +C M +++ + I + + ++
Sbjct: 9 KYERPILSLRITITNKCNENCLYCHHDGM--DDSQEEMNADEIYRICE-IAKNIGVRKIR 65
Query: 149 FTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQ-------RINPELIQC 199
+GG+PLI + +++ + + + I + + R+N L
Sbjct: 66 ISGGEPLIRKD--IVEIVSKIASLDFDDISITSNGTLLGKYAKDLKEAGLNRVNISLDTL 123
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258
E K V N E A I + G+ + VL+KGIN++ + ++
Sbjct: 124 NPETYKKV---TTKN----LLESAKNGILKAVEVGLYPVKINMVLMKGINEN--EVDDMF 174
Query: 259 RTFVELRIKPYYLHHPD 275
E I + D
Sbjct: 175 EFCKEHGIILQLIELMD 191
>gi|229917969|ref|YP_002886615.1| Radical SAM domain protein [Exiguobacterium sp. AT1b]
gi|229469398|gb|ACQ71170.1| Radical SAM domain protein [Exiguobacterium sp. AT1b]
Length = 360
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 25/197 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C L +++ +A + I ++FTGGD
Sbjct: 10 PFIVIWEVTRACALSCVHCRAEAQFHRY-ENELDTEEGKALIREIHAMDNPI-LVFTGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ L L +R S P P R+ + ++ K AG +
Sbjct: 68 PLMRED------LFELTAYASSLGMRV-SMTPSATP-RVTHDAVKRAKAAGLSRWA-FSI 118
Query: 214 NHPYEFSEE-----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ P + + I IS G+ + + + D +A L+ +
Sbjct: 119 DGPDAVTHDYFRGTRGSFDRTIRGISYFREEGMSFQINTTVTEYNVDRLPEMAKLVESL- 177
Query: 263 ELRIKPYYLHHPDLAAG 279
+ + L
Sbjct: 178 --GVSVWTLFFLVPTGR 192
>gi|148652033|ref|YP_001279126.1| molybdenum cofactor biosynthesis protein A [Psychrobacter sp.
PRwf-1]
gi|148571117|gb|ABQ93176.1| GTP cyclohydrolase subunit MoaA [Psychrobacter sp. PRwf-1]
Length = 437
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C G + L+ ++ E + + +V TGG+P I
Sbjct: 131 ITDFCNFRCGYCLPNGYQGKRPDNELTLQEIEVLIKAFAQ-VGTKKVRLTGGEPSIRKD- 188
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
+ ++++ ++ +Q + S
Sbjct: 189 -VTQIIEQVKATPGIQTVAMTSNG 211
>gi|189461431|ref|ZP_03010216.1| hypothetical protein BACCOP_02086 [Bacteroides coprocola DSM 17136]
gi|189431960|gb|EDV00945.1| hypothetical protein BACCOP_02086 [Bacteroides coprocola DSM 17136]
Length = 472
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 46/129 (35%), Gaps = 8/129 (6%)
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVL 126
+ D + + K Y +RI++ + C C +C S L
Sbjct: 58 ECDDNDLLEEIYALARKIKQRFYGNRIVMFAPLYLSNYCVNSCVYCPYHIKNKSIARKKL 117
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHS 182
+ + + +Q+ I G DPL + + + +KT+ I+H ++ + +
Sbjct: 118 TQDEIRQEVIALQDMGHKRLAIEAGEDPLHNPIEYILESIKTIYSIQHKNGAIRRVNVNI 177
Query: 183 RVPIVDPQR 191
V+ R
Sbjct: 178 AATTVENYR 186
>gi|312135865|ref|YP_004003203.1| Radical SAM domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311775916|gb|ADQ05403.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL]
Length = 465
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 89/242 (36%), Gaps = 39/242 (16%)
Query: 89 IVHRY----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y P +L+ C ++C+ C+ E K L + + + ++ I
Sbjct: 100 LIKKYDINIPYAVLIDPTAACNLHCKGCWAGEY---YKAAKLDYEVLDRVVKE-AQQLGI 155
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ +IF+GG+PL+ L+ + + + I+ + I+ + + G
Sbjct: 156 YFIIFSGGEPLLRKDDILKLC----------EKYEDTVFLSFTNATLIDDDFIEKVAKVG 205
Query: 205 KPVYIAIHANHPYEFSEE---------AIAAISRLANAGIILLSQSVLLKGINDDP---E 252
+ AI + + ++E + A+ +L AG++ + + ++ E
Sbjct: 206 -NLAFAISIDGFEKSTDERRGQGVFKKVVTAMEKLKEAGVVFGFSTTYHRYNVEEVSSDE 264
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYI 310
+ L+ + Y+ A S + K + ++ +P ++
Sbjct: 265 YIDFLIEKGAKFGWYFTYVPVGKDAD-ISFMATPEQRAYMYKRIEEIR-----WSKPIFV 318
Query: 311 LD 312
LD
Sbjct: 319 LD 320
>gi|257438968|ref|ZP_05614723.1| radical SAM domain protein [Faecalibacterium prausnitzii A2-165]
gi|257198553|gb|EEU96837.1| radical SAM domain protein [Faecalibacterium prausnitzii A2-165]
Length = 487
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 63/171 (36%), Gaps = 18/171 (10%)
Query: 48 NPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLH 103
+ + + RQ I L + ++ K + ++ L + H
Sbjct: 57 DRDDVTEADLRQCIDDVASLKESGKLWSPDTYEDLAFDFKN-----RNTVVKALCLHVAH 111
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSH- 159
C + C +CF + + ++S + + A+ ++ E S EV F GG+PL+
Sbjct: 112 TCNLNCSYCFASQGRYQGERALMSFEVGKRAMDFLIENSGSRRNLEVDFFGGEPLMNFDM 171
Query: 160 -KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
K+L + I H + RF + I+ ++I + V +
Sbjct: 172 VKKLVAYCREQEKI-HNKNFRFT---MTTNGMLIDDDVIDFCNKECHNVVL 218
>gi|152990825|ref|YP_001356547.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2]
gi|151422686|dbj|BAF70190.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2]
Length = 410
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 10/125 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G+ + + + E I TG +
Sbjct: 129 KSRAFIKIQEGCDFRCSYCIIPYVRGN--ARSMDESLILEQIQKLASN-GFGEFILTGTN 185
Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
L K+LK + I+ V+ +R S ++P +I E + L E ++
Sbjct: 186 VGSYGKDKDTSLAKLLKKIAMIRGVRRIRLGS----IEPIQITDEFKEILDEPWMAKHLH 241
Query: 211 IHANH 215
I H
Sbjct: 242 IALQH 246
>gi|160880587|ref|YP_001559555.1| MiaB-like tRNA modifying enzyme YliG [Clostridium phytofermentans
ISDg]
gi|238065326|sp|A9KLS2|RIMO_CLOPH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|160429253|gb|ABX42816.1| MiaB-like tRNA modifying enzyme YliG [Clostridium phytofermentans
ISDg]
Length = 440
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 39/200 (19%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA----------LAYIQEKSQIWEV 147
LK+ C +C +C ++ G +V + E A L I +++ ++ V
Sbjct: 147 FLKIAEGCDKHCTYCIIPKIRGDY-RSVPMERLVEEAKFLSEGGVKELILIAQETTVYGV 205
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP- 206
G K L ++L+ L I ++ +R P+ IN ELI LK K
Sbjct: 206 DLYGK-------KMLPELLRKLCAIDGIEWIRIQ----YCYPEEINDELIDVLKSETKIC 254
Query: 207 VYIAIHANHP----------YEFSEEAIAAISRLANAGIILLSQSVLLKGI----NDDPE 252
Y+ I H +EE + I++L + ++ L+ G +D E
Sbjct: 255 HYLDIPIQHASDDILKRMGRRTNNEELVTLITKLRKEIPDIALRTSLITGFPGETEEDHE 314
Query: 253 ILANLMRTFV--ELRIKPYY 270
IL +R L + Y
Sbjct: 315 ILKEFVRKMRFERLGVFTYS 334
>gi|72161199|ref|YP_288856.1| hypothetical protein Tfu_0795 [Thermobifida fusca YX]
gi|123733592|sp|Q47RT4|RIMO_THEFY RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|71914931|gb|AAZ54833.1| Conserved hypothetical protein [Thermobifida fusca YX]
Length = 483
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 47/145 (32%), Gaps = 25/145 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------G 151
LK+ C C FC G+ +D ++ + E+ G
Sbjct: 186 LKIASGCDRRCSFCAIPSFRGAY--LSRKPEDVLREAEWLAG-QGVRELFLVSENSTSYG 242
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
D L R L+K+L L I ++ +R + P + P LI L V Y
Sbjct: 243 KD---LGDVRALEKLLPRLAAIPGIERVRV----SYLQPAEVRPGLIDVLTGTPGVVPYF 295
Query: 210 AIHANHPYEFSEEAIAAISRLANAG 234
+ H + + R+ G
Sbjct: 296 DLSFQHA------SGPLLRRMRRFG 314
>gi|254478005|ref|ZP_05091389.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
gi|214036009|gb|EEB76699.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
Length = 292
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 69/178 (38%), Gaps = 25/178 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C +C K + L +D E + + + + E++ TGG+P +LS
Sbjct: 7 LIVTSDCNLRCSYCDYSNKR-RDKKSNLLVEDVERFILAMSDYMNLGEIMITGGEPFLLS 65
Query: 159 HKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHP 216
+ ++ + T++ ++ IL + I+ E I+ LK+ V+I+I N
Sbjct: 66 N--IEYWILTMKKYSPNISILTNGT--------LIDSEQIRWLKKHSVTVHISIDSLNS- 114
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
E+SE +L + +L + L T I+ +
Sbjct: 115 -EYSELYRGGHEKLLS----------ILSKFEKENYKNLKLNITMSRANIEDVHKIIC 161
>gi|312137371|ref|YP_004004708.1| gtp cyclohydrolase subunit moaa [Methanothermus fervidus DSM 2088]
gi|311225090|gb|ADP77946.1| GTP cyclohydrolase subunit MoaA [Methanothermus fervidus DSM 2088]
Length = 308
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 78/210 (37%), Gaps = 24/210 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C + + +S ++ + ++ I +V TGG+PLI
Sbjct: 17 VTRRCNLNCIYCHKEGTL--PTNYEMSKEEIYRICK-VAKEFDINKVKITGGEPLIRKD- 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIHANH-P 216
+ +++ L + + + + + + LK+AG V + NH
Sbjct: 73 -IVEIISALNSL-NFKDISMTTNGVYLKNY------AYKLKKAGLDRINVSLDSLKNHIY 124
Query: 217 YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ ++ IS+ AG+ + ++LK IN++ + +L E
Sbjct: 125 KSITGKDFLDKVKEGISKAIEAGLHPVKINMLILKDINEN--EVWDLFEFCKEHGAILQI 182
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+ + + +F + I +++K
Sbjct: 183 IELVKIDDNSDYFEKYYKSLDSIEEEIRKK 212
>gi|297531022|ref|YP_003672297.1| radical SAM protein [Geobacillus sp. C56-T3]
gi|297254274|gb|ADI27720.1| Radical SAM domain protein [Geobacillus sp. C56-T3]
Length = 372
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 61/176 (34%), Gaps = 16/176 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPIVDPQRINPELIQCLKEAGKPV--- 207
PL+ + L + LR S P V + I L +
Sbjct: 66 PLMRPD------VYDLAKYAIDKGLRVSMTPSATPNVTKEAIRKAKEVGLSRWAFSLDGP 119
Query: 208 --YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H + I AI L I + +V+ + + +A L+
Sbjct: 120 NAEIHDHFRGVSGSFDLTIRAIQYLHELDIPVQINTVISRYNVHVLDEMAALVEKL 175
>gi|325662160|ref|ZP_08150778.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
4_1_37FAA]
gi|331085957|ref|ZP_08335040.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325471609|gb|EGC74829.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
4_1_37FAA]
gi|330406880|gb|EGG86385.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 438
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 21/128 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C M G + ++ ++ + EV+ TG
Sbjct: 148 HTRAYIKVQDGCNQFCTYCIIPYMRGRVRSRR--KEEVVEEVSALAANGY-KEVVLTG-- 202
Query: 154 PLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ LS + L +++ + I+ ++ +R S ++P+ I E L K
Sbjct: 203 -IHLSSYGVDFEEKETLLSLIQAVHAIEGIERIRLGS----LEPRIITEEFASALSALPK 257
Query: 206 PVYIAIHA 213
I H
Sbjct: 258 ---ICPHF 262
>gi|257468717|ref|ZP_05632811.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
ATCC 49185]
Length = 324
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y +I ++ C + C +C E V S +K +L+ ++ E + + I
Sbjct: 1 MLDKYRRKIDYLRISIIDKCNLKCIYCMPEESVESIEKDELLTFEEIER-ICIAAAEIGI 59
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
++ TGG+PLI K + ++K ++ IK ++ + + +++
Sbjct: 60 KKIKITGGEPLIR--KEVAGLVKKIKLIKGIENVTLTTNGILLEKN 103
>gi|171184989|ref|YP_001793908.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
V24Sta]
gi|170934201|gb|ACB39462.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
Length = 266
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 45/249 (18%), Positives = 80/249 (32%), Gaps = 48/249 (19%)
Query: 93 YPD-RILLKLLHVCPVYCRFCFRREMV---------GSQKGTVLSSKDTEAALAYIQEKS 142
YP R C C +C RR G + L+ + ++ ++E+
Sbjct: 10 YPRLRSAYLQFDGCNYVCPWCIRRLTPWDHHLPDAGGLKTRRHLTLGELVEVVSGLRERG 69
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ E + GG+P + L +V+KTL + +R + I+ EL+ L+
Sbjct: 70 AV-EAVLGGGEPTV--DPELPQVVKTLAGL----RVRILTNGFS-----ISEELLGVLRS 117
Query: 203 AGKPVYIAIHANHPYEFSEE------------AIAAISRLANAGIILLSQSVLLKGINDD 250
+ +A + RL AG+ + ++VL+ G+ND
Sbjct: 118 CPACEVVV----SVKTLDPARHLAYTGKPLGPVLANVKRLVEAGVAVKFETVLIPGLNDV 173
Query: 251 PEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
++ + GT R EE V + S Y
Sbjct: 174 EDVEEIARYIGEVAGPDAVLIIDPLIPIPGTPWRRPAPEE----VEEAHRRAS-----RY 224
Query: 310 ILDLPGGYG 318
+ G G
Sbjct: 225 VKTARHGGG 233
>gi|146351232|ref|YP_001210459.1| molybdenum cofactor biosynthesis protein A [Arthrobacter
nitroguajacolicus]
gi|146218796|emb|CAL09868.1| putative MoaA-like protein [Arthrobacter nitroguajacolicus]
Length = 376
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G+V RY R L L C + C +C E M K V+S+++ + +
Sbjct: 33 GLVDRYGRRATDMRLSLTDKCNLRCTYCMPAEGMEWLSKQAVMSAEEIQRIVRVGVHFLG 92
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ E+ TGG+PL+ + L ++ +LR
Sbjct: 93 VRELRLTGGEPLVRAD--LLDIISSLRQ 118
>gi|222053130|ref|YP_002535492.1| radical SAM protein [Geobacter sp. FRC-32]
gi|221562419|gb|ACM18391.1| Radical SAM domain protein [Geobacter sp. FRC-32]
Length = 359
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 71/219 (32%), Gaps = 38/219 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + C + C C R + ++ + + L I + S+ V+ +GG+
Sbjct: 7 PKWIAWETTQKCNLKCVHC-RCSSDLTSSEGDFTTDEGKKLLKEIADFSKPV-VVLSGGE 64
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
PL+ L +L + + + + E+ Q +KEA +
Sbjct: 65 PLMRQDIFELAGYGTSLG-----LRMCMATNGAL-----VTDEVCQKMKEADIKMVSLSL 114
Query: 209 ----IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
A+H N P F A G L S K +D +AN +
Sbjct: 115 DGSTAAVHDNFRQCPGAFDGVVRA-AELFRKHGQKFLINSSFTKRNQND---IANTFKVA 170
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L +Y+ + G++I+ L K
Sbjct: 171 KSLGATAWYMFMI----------VPTGRGEEIMNELISK 199
>gi|152107|gb|AAA26221.1| nitrogenase [Bradyrhizobium japonicum]
Length = 498
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 63/216 (29%), Gaps = 32/216 (14%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + +A Q+
Sbjct: 49 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAVRKVIAVATTIPQM 108
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI------------VDPQR 191
+ G D L K + + +++ + VD
Sbjct: 109 TVLGIAGPADALANPAKTFKTLALVTEAAPDIKLC-LSTNGLALPDYVDTIVRAKVDHVT 167
Query: 192 INPELIQCLKEAGKPVYIAIHANH--------PYEFSEEAIAAISRLANAGIILLSQSVL 243
I ++ E G +Y I NH + + + L+ GI+ SV+
Sbjct: 168 ITINMVD--PEIGAKIYPWIFFNHKRYTGIEAARILTNRQLQGLEMLSERGILCKINSVM 225
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ INDD + + + +
Sbjct: 226 IPNINDDHLVEV--NKAVTSRGAFLHNIMPLISVPE 259
>gi|330835444|ref|YP_004410172.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
gi|329567583|gb|AEB95688.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
Length = 369
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP ++ + C + C C+ G+Q+ L A+ + ++ +GG
Sbjct: 27 YPSVLVFNVTRNCNLRCLHCYSSS--GTQQFYDLPLSVWIEAVKQ-ASDMGVKHILLSGG 83
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+PL L R I + + ++ +R ++ L++ YI +
Sbjct: 84 EPLARRDLSLIAREAWERGI----RVELSTNGTMLTRER-----LEELRKYVD--YIGVS 132
Query: 213 ANHPYEFSEEAIAAISRLANA----------GIILLSQSVLLKGINDDPEILANLMRTFV 262
+ P + + + + G+ + + K + + L +LM+
Sbjct: 133 LDGPEKVHDAFRGVYGAFSKSIKGLRISKEMGVKTGLRFTITKENYNYVDFLFDLMKKEG 192
Query: 263 ELRIKPYYL 271
R+ Y+L
Sbjct: 193 IDRVCFYHL 201
>gi|223039951|ref|ZP_03610234.1| conserved hypothetical protein [Campylobacter rectus RM3267]
gi|222878819|gb|EEF13917.1| conserved hypothetical protein [Campylobacter rectus RM3267]
Length = 431
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 16/164 (9%)
Query: 63 QKEELNILPEEREDPIGDNNH--SPLKGIVHRYPD--RILLKLLHVCPVYCRFCF----R 114
K+E + +DP + + S K IV Y + + +K+ C C +C R
Sbjct: 111 SKKEDINALLKSQDPFFELGNLKSIDKNIVTNYENHTKAFIKIQEGCDFACSYCIIPAVR 170
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ + +L A Y + + G D L ++L L +
Sbjct: 171 GKARSMDEEAILREAKILAYNGYNELVLTGTNIGSYGKDTG----SSLGRLLGRLGKVGG 226
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
++ +R S ++P +I+ + L+E+ ++ I H E
Sbjct: 227 IKRIRLGS----IEPSQIDESFREILRESWLERHLHIALQHTSE 266
>gi|281355888|ref|ZP_06242381.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Victivallis vadensis ATCC BAA-548]
gi|281317257|gb|EFB01278.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Victivallis vadensis ATCC BAA-548]
Length = 238
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 75/216 (34%), Gaps = 16/216 (7%)
Query: 93 YPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP +I + C + C FC +V ++ + +++ + + E V+ +
Sbjct: 14 YPGKIGCIVFTGGCNLRCPFCHNPCLVFDPASQPKVTE--KEFFGFLERRKGLLEGVVIS 71
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHV-QILRFHS---RVPIVDPQRINPELIQCLKEAGKP 206
GG+P++ L ++ +R + ++ + RV + + K
Sbjct: 72 GGEPMLQPD--LVPFVERIRKSGFLAKVDSNGTFPDRVKTLLHTAGADSMGIDYKAPRAK 129
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ P E I AG+ L ++ + K + + + LA + + +
Sbjct: 130 YAELTGLDEPD-LGERVAETIRLALEAGVELDIRTTVHKALLSE-DDLAAMRDELSAIGV 187
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQ---KIVASLKE 299
+ L + L E ++VA+ +
Sbjct: 188 SRWTLQQFNPVEVIDD-DLPQAETYSDRELVAAARR 222
>gi|256828055|ref|YP_003156783.1| molybdenum cofactor biosynthesis protein A [Desulfomicrobium
baculatum DSM 4028]
gi|256577231|gb|ACU88367.1| molybdenum cofactor biosynthesis protein A [Desulfomicrobium
baculatum DSM 4028]
Length = 330
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 56/157 (35%), Gaps = 13/157 (8%)
Query: 101 LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C + E +LS ++ + + +++ + +V TGG+P
Sbjct: 17 ITDRCNLRCLYCRPQSEWTFMPHEQILSFEEMAELVD-VAKEAGVEKVRLTGGEPFARKD 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHPYE 218
L LR + + R++ ++ + + + E
Sbjct: 76 --FIPFTGRLHAKYPDLDLRITTNG-TLLSGRVDE--LREAGVSCLNISLDTLQRKKFEE 130
Query: 219 FS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ ++ A I G+ + V LKGINDD
Sbjct: 131 ITKVDAYDQVRAGIDACLAGGLRVKVNVVALKGINDD 167
>gi|298529802|ref|ZP_07017205.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511238|gb|EFI35141.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 360
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 70/200 (35%), Gaps = 28/200 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
+ ++ C + C C G + DT A + I Q+ VIFTGG+P
Sbjct: 20 VAWEVTRSCNLACSHCRAEAHPEPYPGEL----DTAQARSLIDTFPQVGNPVVIFTGGEP 75
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA 213
L+ + L Q LR V + I PE + +K +G I+I
Sbjct: 76 LLRPD------IFELISYADSQGLRC---VMAPNGTLITPENAKEIKSSGIQRCSISIDG 126
Query: 214 NHPYEFS---------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
E E+++A I L +AG+ + + K D + + NL R
Sbjct: 127 PTAQEHDLLRGVPGAFEQSMAGIEYLKSAGVEFQINTTVTKDNLDKFKDIFNLARDL--- 183
Query: 265 RIKPYYLHHPDLAAGTSHFR 284
+++ + R
Sbjct: 184 GAVAWHIFMLVPTGRGADLR 203
>gi|188582019|ref|YP_001925464.1| molybdenum cofactor biosynthesis protein A [Methylobacterium populi
BJ001]
gi|179345517|gb|ACB80929.1| molybdenum cofactor biosynthesis protein A [Methylobacterium populi
BJ001]
Length = 344
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 15/167 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C +M K +L+ ++ + + ++ TGG+PL+
Sbjct: 32 VTDRCDFRCAYCMAEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRRD- 89
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIAI-HANHP 216
+ + + L H++ + R PEL L V + A
Sbjct: 90 -IMHLFRRLSR--HLKSGALDELTLTTNGSQLARFAPELAD-LGVRRINVSLDTLDAEKF 145
Query: 217 YEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+ +A I +AGI + +V LKG+N+D
Sbjct: 146 RAITRRGDLSVVLAGIEAARSAGIKVKINAVALKGVNEDEIADMIAW 192
>gi|22298906|ref|NP_682153.1| molybdenum cofactor biosynthesis protein A [Thermosynechococcus
elongatus BP-1]
gi|22295087|dbj|BAC08915.1| molybdenum cofactor biosynthesis protein A [Thermosynechococcus
elongatus BP-1]
Length = 332
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 15/206 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C + T L+ + +A + E I V TGG+PL+
Sbjct: 38 ITDRCNLRCMYCMPVDAAFMPPQTYLTPTEYATIVAELVE-LGIESVRLTGGEPLLR--A 94
Query: 161 RLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI---NPELIQCLKEAGKPVYIAIHANH 215
+++ L + + + R+ P L L + AI H
Sbjct: 95 EFAEIVAALVAAGVPQLSLTTNGIRLVPFLPLLAHYGVRRLNISLDSLDPQTFAAISHGH 154
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
E AAI+ + G + V++ G+ND L +++ L I+ +L
Sbjct: 155 HLE---TVKAAIATAVDQGFQVKLNMVVMAGVND--HELVSMVEYAKGLGIEVRFLELMR 209
Query: 276 LAAGTSHFRLT-IEEGQKIVASLKEK 300
H ++ L++
Sbjct: 210 -IGYACHLGSDRFVSAATMIERLRQH 234
>gi|332983050|ref|YP_004464491.1| Radical SAM domain-containing protein [Mahella australiensis 50-1
BON]
gi|332700728|gb|AEE97669.1| Radical SAM domain protein [Mahella australiensis 50-1 BON]
Length = 289
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 73/215 (33%), Gaps = 54/215 (25%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G ++Y RIL ++ +C C FC ++ ++ +D + L ++ QI ++
Sbjct: 12 GDKNKY--RILWEITDMCNQRCPFC------HAKGTNNITIEDVKKILDNLKI-LQIKDI 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEA 203
I TGG+P + + + + +Q + + ++D ++I+ LK+
Sbjct: 63 ILTGGEPFLRKD------IFEIMDM--IQRGGYCVDLCTNGTLLDKEKISN-----LKKY 109
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+ + L DD + + +R V
Sbjct: 110 VSEISV--------SLDAHNRELYRVLRGR---------------DDFDKVIQNIRELVF 146
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
I + L + F +E+ + L+
Sbjct: 147 QGIAVH--LICTLNSHNYPF---VEQIIALAEELR 176
>gi|294496217|ref|YP_003542710.1| radical SAM protein [Methanohalophilus mahii DSM 5219]
gi|292667216|gb|ADE37065.1| Radical SAM domain protein [Methanohalophilus mahii DSM 5219]
Length = 322
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 45/252 (17%), Positives = 84/252 (33%), Gaps = 44/252 (17%)
Query: 63 QKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE----- 116
EE L+ + + + K H++ RI L + C + C++C R+
Sbjct: 8 DPEECLSEEDRDSIKRLIAQHPCYNKDAQHKF-GRIHLSVAPKCNIKCKYCDRKYDCVNE 66
Query: 117 -MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYI-- 172
G + + E ++E I V G GDPL ++ +T + I
Sbjct: 67 SRPGVTSEVLNPQQALEKTQKVLEEYPFIKVVGIAGPGDPLAN-----EETFETFKLIKQ 121
Query: 173 --KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV---------YIAIHANH------ 215
V + + P RI L + + I H N+
Sbjct: 122 HFPDVTLC-LSTNGLA-LPARIQDVLDSGVSTLTVTLNAIDPEIGAKIVDHVNYNGKTYR 179
Query: 216 ----PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
E + I + AG+++ +VL+ GIN+D I + ++ + Y+
Sbjct: 180 GVEGASILLENQLEGIRKAVEAGLVVKINTVLVPGINEDHIIEIA--QKLNDMGV---YI 234
Query: 272 HHPDLAAGTSHF 283
+ + F
Sbjct: 235 MNVMPLICQADF 246
>gi|291458400|ref|ZP_06597790.1| pyruvate formate-lyase 1-activating enzyme [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291418933|gb|EFE92652.1| pyruvate formate-lyase 1-activating enzyme [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 269
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 21/177 (11%)
Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
P L L C + CR+C + + + A Y + + + +GG
Sbjct: 41 PGTRFLIFLKGCAMRCRYCHNPDTWDYHSEDMRSADSLLDQAERYREYWGEDGGITVSGG 100
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPELIQCLKE 202
DPLI LQ L + + S P ++ ++ +KE
Sbjct: 101 DPLIQIDFVLQ--LFEEAKRRGINTCLDTSAQPFTRKKPFFGKFTKLMKLTDTVLLDIKE 158
Query: 203 --AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ K ++ N E + L+ G+ + + VL+ G+ D E L +L
Sbjct: 159 IDSRKHRWLTGWGN------ENILDCARYLSETGVPVWIRHVLVPGVTDRDEELRSL 209
>gi|225028441|ref|ZP_03717633.1| hypothetical protein EUBHAL_02715 [Eubacterium hallii DSM 3353]
gi|224954239|gb|EEG35448.1| hypothetical protein EUBHAL_02715 [Eubacterium hallii DSM 3353]
Length = 465
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 68/200 (34%), Gaps = 33/200 (16%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF------ 149
LK+ C C +C + G +D + E + E+I
Sbjct: 163 TAYLKIAEGCNKRCTYCIIPYIRGHY--RSFPMEDLLEEARKLAE-GGVKELILIAQETT 219
Query: 150 -TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-V 207
G D K L ++L L I+ ++ +R P+ I ELI +K+ K
Sbjct: 220 VYGMDCY--GRKALPELLTKLCEIEGIEWIRI----LYCYPEEITDELIAVMKKEKKICH 273
Query: 208 YIAIHANHPYEF----------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
Y+ I H + E ++ + +L ++ ++ L+ G + E
Sbjct: 274 YLDIPIQHSEDTILKRMGRRTNRAELVSLVEKLRKEIPDIVLRTTLITGFPGETEEEFKN 333
Query: 258 MRTFV------ELRIKPYYL 271
M FV L + PY
Sbjct: 334 MVDFVDSMEFDRLGVFPYSA 353
>gi|150016877|ref|YP_001309131.1| nitrogenase cofactor biosynthesis protein NifB [Clostridium
beijerinckii NCIMB 8052]
gi|149903342|gb|ABR34175.1| nitrogenase cofactor biosynthesis protein NifB [Clostridium
beijerinckii NCIMB 8052]
Length = 896
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 82/239 (34%), Gaps = 36/239 (15%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKSQIWEV 147
H+Y R+ + + C + C +C R+ ++ ++++ EA Y KS++ +
Sbjct: 502 HKYA-RMHIPIAPKCNISCNYCLRKFDCVNESRPGVTTEVLSPEEAFAKYKLVKSKMDNL 560
Query: 148 IFTG----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G GD L + +++ LK +R + ++ E + L +
Sbjct: 561 KVVGIAGPGDAL-ANFDNVRETLKLIREHDPEVTFCLSTNGLMLP---FYAEELINLGVS 616
Query: 204 GKPVYIA---------------------IHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
V + ++ I LA+ GI++ V
Sbjct: 617 HVTVTMNAIDPKITAKVYKFVDYLGVTYTGEEAAQILLNNQLSGIKYLADRGIMVKVNIV 676
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
+LKGIND + I + G+ + + ++I+ L++K
Sbjct: 677 MLKGINDHHIEEVTKKAKELGAGITN--IMQMIPVKGSVFENMPLTSNKEIM-DLRKKC 732
>gi|317503044|ref|ZP_07961124.1| Fe-S oxidoreductase [Prevotella salivae DSM 15606]
gi|315665844|gb|EFV05431.1| Fe-S oxidoreductase [Prevotella salivae DSM 15606]
Length = 446
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 17/130 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + +SS K E A A E++ TG
Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTISSLIKQAEEAAA-----EGGKEIVLTG 207
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD +H+R ++K L ++ ++ R S ++P I+ ELI E+
Sbjct: 208 VNIGDFGETTHERFIDLVKALDKVEGIKRFRISS----LEPDLIDDELIAFCAESR---A 260
Query: 209 IAIHANHPYE 218
H + P +
Sbjct: 261 FMPHFHIPLQ 270
>gi|312621556|ref|YP_004023169.1| Radical SAM domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202023|gb|ADQ45350.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 465
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 89/242 (36%), Gaps = 39/242 (16%)
Query: 89 IVHRY----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y P IL+ C ++C+ C+ E K L + + + ++ I
Sbjct: 100 LIKKYDINIPYAILIDPTAACNLHCKGCWAGEY---HKAAKLDYEILDRVVKE-AQELGI 155
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ +IF+GG+PL+ L+ + + + I+ + I + + G
Sbjct: 156 YFIIFSGGEPLLRKDDILKLC----------EKYEDTVFLSFTNATLIDDDFIDKVAKVG 205
Query: 205 KPVYIAIHANHPYEFSEE---------AIAAISRLANAGIILLSQSVLLKGINDDP---E 252
+ AI + + ++E + A+ +L AG++ + + ++ E
Sbjct: 206 -NLAFAISIDGFEKSTDERRGQGVFKKVVTAMEKLKEAGVVFGFSTTYHRYNVEEVSSDE 264
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYI 310
+ L+ + Y+ A S+ + + + ++ +P ++
Sbjct: 265 YIDFLIEKGAKFGWYFTYVPVGKDAD-ISYMATPEQRAYMYRRIEEIR-----WSKPIFV 318
Query: 311 LD 312
LD
Sbjct: 319 LD 320
>gi|158522869|ref|YP_001530739.1| molybdenum cofactor biosynthesis protein A [Desulfococcus
oleovorans Hxd3]
gi|158511695|gb|ABW68662.1| molybdenum cofactor biosynthesis protein A [Desulfococcus
oleovorans Hxd3]
Length = 330
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 22/162 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C +L+ ++ + + I +V TGG+PL+
Sbjct: 21 VTDRCNLNCIYCNPSRYAKKLAHSDILTYEELLSIIE-AGAGLGITKVRITGGEPLVRKD 79
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPELIQCLKEAGKPVYI 209
+ ++ I + L + ++ RIN L + K +
Sbjct: 80 AC--DFIGSVSAISGITDLSLTTNGVVLADCAGRLRKAGVNRINISLDTLDRRRFKTITG 137
Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ I AG + V+++GINDD
Sbjct: 138 HDRF-------DRVWKGIQAALKAGFSPVKLNMVVMRGINDD 172
>gi|222530151|ref|YP_002574033.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456998|gb|ACM61260.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 465
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 89/242 (36%), Gaps = 39/242 (16%)
Query: 89 IVHRY----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++ +Y P IL+ C ++C+ C+ E K L + + + ++ I
Sbjct: 100 LIKKYDINIPYAILIDPTAACNLHCKGCWAGEY---HKAAKLDYEILDRVVKE-AQELGI 155
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ +IF+GG+PL+ L+ + + + I+ + I + + G
Sbjct: 156 YFIIFSGGEPLLRKDDILKLC----------EKYEDTVFLSFTNATLIDDDFIDKVAKVG 205
Query: 205 KPVYIAIHANHPYEFSEE---------AIAAISRLANAGIILLSQSVLLKGINDDP---E 252
+ AI + + ++E + A+ +L AG++ + + ++ E
Sbjct: 206 -NLAFAISIDGFEKSTDERRGQGVFKKVVTAMEKLKEAGVVFGFSTTYHRYNVEEVSSDE 264
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYI 310
+ L+ + Y+ A S+ + + + ++ +P ++
Sbjct: 265 YIDFLIEKGAKFGWYFTYVPVGKDAD-ISYMATPEQRAYMYRRIEEIR-----WSKPIFV 318
Query: 311 LD 312
LD
Sbjct: 319 LD 320
>gi|291396166|ref|XP_002714713.1| PREDICTED: molybdenum cofactor synthesis-step 1 protein
[Oryctolagus cuniculus]
Length = 613
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 16/129 (12%)
Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
RQF+ +E D G H Y L C + C++C E
Sbjct: 46 RRQFL--REHAAPFSAFLTDRFGRR---------HSYLRISL---TEKCNLRCQYCMPEE 91
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
V L + + LA + K + ++ TGG+PLI ++ L ++ ++
Sbjct: 92 GVSLTPKADLLTTEEILTLARLFVKEGVDKIRLTGGEPLIRPDVV--DIVARLHRLEGLR 149
Query: 177 ILRFHSRVP 185
+ +
Sbjct: 150 TIGVTTNGI 158
>gi|241764970|ref|ZP_04762968.1| molybdenum cofactor biosynthesis protein A [Acidovorax delafieldii
2AN]
gi|241365443|gb|EER60224.1| molybdenum cofactor biosynthesis protein A [Acidovorax delafieldii
2AN]
Length = 378
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ +LS ++ + ++ TGG+PL
Sbjct: 46 VTDRCNFRCNYCMPKEVFDKDYAYLPHNALLSFEEITRLARLFMAH-GVRKIRLTGGEPL 104
Query: 156 ILSH-KRLQKVLKTLRYIK 173
+ + + L L LR I
Sbjct: 105 LRKNVEELVAQLAQLRTID 123
>gi|325962827|ref|YP_004240733.1| GTP cyclohydrolase subunit MoaA [Arthrobacter phenanthrenivorans
Sphe3]
gi|323468914|gb|ADX72599.1| GTP cyclohydrolase subunit MoaA [Arthrobacter phenanthrenivorans
Sphe3]
Length = 369
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 8/115 (6%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRRE- 116
+PQ E G+ RY R L L C + C +C E
Sbjct: 1 MPQPRE--EAGASLPSDPAARPADAPAGLADRYGRRATDMRLSLTDKCNLRCTYCMPAEG 58
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ K V+S+++ + E+ + E+ TGG+PL+ L ++ LR
Sbjct: 59 LEWLAKQAVMSAEEIVRIVRIGVEQLGVRELRLTGGEPLVRHD--LVDIIAALRR 111
>gi|322420151|ref|YP_004199374.1| Radical SAM domain-containing protein [Geobacter sp. M18]
gi|320126538|gb|ADW14098.1| Radical SAM domain protein [Geobacter sp. M18]
Length = 409
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 63/187 (33%), Gaps = 20/187 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + L C + C +CF + L ++K+ L + Q+ + GG+PL
Sbjct: 23 VSMLLTDRCNLRCSYCFIDCTPANDSRMSLDTAKEIARLLIENSQYPQVA-LHLYGGEPL 81
Query: 156 ILSHKRLQKVLKTLRYI--KHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
++ + + R + KH + I + ++D +R ++ V +I
Sbjct: 82 LVDDAWISDFVGYARPLGQKHGKEVIFPLSTNGTLLDEER-------MVRLHQLGVSFSI 134
Query: 212 HANHPYEFSEEAIAAISRL-------ANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ P + ++ I + + + D + + +R
Sbjct: 135 SCDGPPHIHDACREGGDKIHDLFGIARKRNIPVGVVATINTHNCDKMQEVMEYLREQRVA 194
Query: 265 RIKPYYL 271
+ ++
Sbjct: 195 GMISNFV 201
>gi|295107081|emb|CBL04624.1| GTP cyclohydrolase subunit MoaA [Gordonibacter pamelaeae 7-10-1-b]
Length = 333
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 22/170 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C C +C + V S +L ++ E A+ + I + TGG+PL+
Sbjct: 16 LTDRCNFRCIYCMPEDGVQSLAHEDILRIEEIEQAVR-VAAGMGIRSIRLTGGEPLV--- 71
Query: 160 KRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----- 211
RL V+ +R I H ++ + + ++ P+ + ++ + + +
Sbjct: 72 -RLG-VVDLVRAIAHTPGIENVSMTTNG-VLLPKMADD--LKQAGLSRVNISLDTLDPAQ 126
Query: 212 --HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258
E ++ + I AG + +V ++ ++ D A L
Sbjct: 127 FKQITRRGEL-QQTLDGIEAALEAGFNPVKINAVAVRSLDQDYLAFAKLS 175
>gi|293376744|ref|ZP_06622966.1| molybdenum cofactor biosynthesis protein A [Turicibacter sanguinis
PC909]
gi|292644610|gb|EFF62698.1| molybdenum cofactor biosynthesis protein A [Turicibacter sanguinis
PC909]
Length = 323
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 4/94 (4%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C K LS + + I +V TGG+PL+
Sbjct: 16 VTDQCNLRCVYCMEDTTQEFLPKCGKLSDDEMIRIVTACAR-LGIKKVRLTGGEPLVRP- 73
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
+ +++K + I ++ + + ++ Q
Sbjct: 74 -GIVELIKRIHDIDGIEEIYLTTNGTVLSDQVKT 106
>gi|291531886|emb|CBK97471.1| SSU ribosomal protein S12P methylthiotransferase [Eubacterium
siraeum 70/3]
Length = 446
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 37/204 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
P L++ C C +C + S+ E + + ++ + E++
Sbjct: 146 PHYAYLRIADGCSNKCSYCA-----IPLIRGKMRSRKMENIIEEAKKFAENGVKELVIVA 200
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L +LK L I ++ +R P+R+ ELI+ +K K
Sbjct: 201 QDVTAYGIDLYKKYALPDLLKELCKIDGIKWIRL----LYCYPERMTDELIETIKTEDKV 256
Query: 207 V-YIAIHANHP-YEF---------SEEAIAAISRLANA--GIILLSQSVLLKGI-NDDPE 252
+ YI I H E + ++L G++L + L+ G + E
Sbjct: 257 LNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITGFPGETEE 314
Query: 253 ILANLMR-----TFVELRIKPYYL 271
+ L F L Y
Sbjct: 315 QFSELAEFVNDIKFERLGCFAYSA 338
>gi|220915987|ref|YP_002491291.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219953841|gb|ACL64225.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 337
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 67/222 (30%), Gaps = 43/222 (19%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C E +L + + + V TGG+P +
Sbjct: 33 LTDRCNFRCTYCSPAEH--EAPDALLQRPEIARLVRVFAG-LGVRRVRLTGGEPTLRKD- 88
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
L +++ ++ + + R+ EL+ L+ AG
Sbjct: 89 -LVEIVADAAATPGIEEVALTTNG-----HRL-DELVAPLRAAGLGAVNV-------SLD 134
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
+ ++ G L +L GI+ +L V +R
Sbjct: 135 TLVPERLGGVSGKGARLD---RILAGIDAAAGRFRSLKLNTVVMR--------------- 176
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ +E +V ++ G P +I +P G G V +
Sbjct: 177 ---GVNEDELGALVRYAWDR--G-ALPRFIEQMPFGGG-VPV 211
>gi|197121283|ref|YP_002133234.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter sp. K]
gi|196171132|gb|ACG72105.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter sp. K]
Length = 337
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 67/222 (30%), Gaps = 43/222 (19%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C E +L + + + V TGG+P +
Sbjct: 33 LTDRCNFRCTYCSPAEH--EAPDALLQRPEIARLVRVFAG-LGVRRVRLTGGEPTLRKD- 88
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
L +++ ++ + + R+ EL+ L+ AG
Sbjct: 89 -LVEIVADAAATPGIEEVALTTNG-----HRL-DELVAPLRAAGLGAVNV-------SLD 134
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
+ ++ G L +L GI+ +L V +R
Sbjct: 135 TLVPERLGGVSGKGARLD---RILAGIDAAAGRFRSLKLNTVVMR--------------- 176
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ +E +V ++ G P +I +P G G V +
Sbjct: 177 ---GVNEDELGALVRYAWDR--G-ALPRFIEQMPFGGG-VPV 211
>gi|325829928|ref|ZP_08163386.1| molybdenum cofactor biosynthesis protein A [Eggerthella sp. HGA1]
gi|325488095|gb|EGC90532.1| molybdenum cofactor biosynthesis protein A [Eggerthella sp. HGA1]
Length = 333
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 28/173 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C C +C E V S +L ++ E A+ + I + TGG+PL+
Sbjct: 16 LTDRCNFRCIYCMPEEGVQSLAHEDILRIEEIEEAVR-VAAGMGIRSIRLTGGEPLV--- 71
Query: 160 KRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKE---AGKPVYIAI-- 211
RL V+ +R I H ++ + + ++ P++ LKE + + +
Sbjct: 72 -RLG-VVDLVRAIAHTPGIENVSMTTNGVLL------PKMAADLKEAGLSRVNISLDTLD 123
Query: 212 -----HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258
E ++ + I AG + +V ++ ++ D A L
Sbjct: 124 PEQFKQITRRGEL-QQTLDGIDAALAAGFNPVKINAVAVRSLDQDYLAFAKLS 175
>gi|323704197|ref|ZP_08115776.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536263|gb|EGB26035.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 467
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 14/126 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + + D + +++ EV+ TG
Sbjct: 160 HTRAYLKIQDGCNQYCTYCIIPYARGPIRSRKPN--DIFDEVKRLRDNGY-KEVVLTGIH 216
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++K + I+ ++ +R S P + E + L + +
Sbjct: 217 VASYGKD---LENVDLLDIIKMIHEIEGIERIRLSSIEPTFLTEDFVRE-VSLLPKFCRH 272
Query: 207 VYIAIH 212
+I++
Sbjct: 273 YHISLQ 278
>gi|312879890|ref|ZP_07739690.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
gi|310783181|gb|EFQ23579.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
Length = 373
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 24/153 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ L C + CR C+ + +S ++ L V+ +GG+PL
Sbjct: 29 VVVWHLTDRCGLRCRHCYAEA--TPEGERFVSLREGFRCLETFAAWGAPA-VLLSGGEPL 85
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
H R L+ + L + R++ + L + G Y+ + +
Sbjct: 86 ESPHGR--AFLERGAELG--LSLAVSTNGT-----RVDDSWAEALAKRG--AYVGVSLDG 134
Query: 216 PYEFSE----------EAIAAISRLANAGIILL 238
P E + A A + RL AG
Sbjct: 135 PQEIHDSFRGVPGAWNAAAAGLERLKRAGARCG 167
>gi|221111831|ref|XP_002167227.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 802
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMV--GSQKGTVLSSKDTEAALAYIQEKSQIW 145
G H Y L C + C +C E V ++ + + + LA + +
Sbjct: 103 GRKHNYLRISL---TERCNLRCGYCMPEEGVLLTNKDDLLTNEEMIR--LARLFVFEGVN 157
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
++ TGG+PL+ + ++ L +K ++ L + +
Sbjct: 158 KIRLTGGEPLVRKD--IVQICDQLSSLKGLKTLAITTNGLVA 197
>gi|123485105|ref|XP_001324419.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
gi|121907301|gb|EAY12196.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
Length = 296
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + L C +C+FCF R G + + L ++ + I + + + F GG+P
Sbjct: 6 TVNIHYLRSCNYHCKFCFHR---GIENSSTLKLEEWHKIIDTIAKSGLVKRINFAGGEPF 62
Query: 156 ILSHK 160
+L
Sbjct: 63 MLRKH 67
>gi|319957025|ref|YP_004168288.1| miab-like tRNA modifying enzyme [Nitratifractor salsuginis DSM
16511]
gi|319419429|gb|ADV46539.1| MiaB-like tRNA modifying enzyme [Nitratifractor salsuginis DSM
16511]
Length = 421
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 39/129 (30%), Gaps = 6/129 (4%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + + + E I TG +
Sbjct: 135 KSRAFIKIQEGCNFRCSYCI--IPFVRGNARSHDEEQILEQVRRLAAN-GFGEFILTGTN 191
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
R L K+LK + I+ V+ +R S PI L + + +
Sbjct: 192 VGSYGRDRGTSLAKLLKRMSQIRGVRRIRIGSLEPIQIDAEFMELLAEPWMARHLHIALQ 251
Query: 211 IHANHPYEF 219
++ E
Sbjct: 252 HTSDRMLEL 260
>gi|255691410|ref|ZP_05415085.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
gi|260623056|gb|EEX45927.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
Length = 439
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 72/263 (27%), Gaps = 49/263 (18%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ S R LK+ C +C +C G + ++S E A
Sbjct: 135 DIRSFSPSCSRGDRTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AA 191
Query: 141 KSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
E++ TG GD + + +++ L I+ ++ R S ++P + E+I
Sbjct: 192 AEGGKEIVLTGVNIGDFGKTTGETFFDLVQALDQIEGIERYRISS----IEPNLLTDEII 247
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ + + H L G ++ + L
Sbjct: 248 EFVSHSRS---FMPHF--------------------------HIPLQSGCDE----VLKL 274
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ-----KIVASLKEKISGLCQPFY-IL 311
MR + + + + + + G + ISGL +
Sbjct: 275 MRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETAEFFEQAYRFISGLDVTQLHVF 334
Query: 312 DLPGGYGKVKIDTHNIKKVGNGS 334
G + +
Sbjct: 335 SYSERPGTQALKIDYVVSPEEKH 357
>gi|288553679|ref|YP_003425614.1| hypothetical protein BpOF4_03280 [Bacillus pseudofirmus OF4]
gi|288544839|gb|ADC48722.1| hypothetical protein BpOF4_03280 [Bacillus pseudofirmus OF4]
Length = 370
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 48/136 (35%), Gaps = 12/136 (8%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
+ C YCRFC G +G VL D E IQE + E++ GG
Sbjct: 61 TNFCDTYCRFCAFYRKPGHSEGYVL---DNERIFEKIQETIDVGGTEILMQGG---TNPD 114
Query: 160 KRLQKVLKTLRYI----KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+L LR I ++ + F + + + + L+ + ++
Sbjct: 115 LKLDYYTNLLREIKERFPNIWMHSFSPAEIWKIAEVSDMTVEEVLRALHEAGLDSMPGGG 174
Query: 216 PYEFSEEAIAAISRLA 231
+EE +SRL
Sbjct: 175 AEILTEETRLRVSRLK 190
>gi|227498447|ref|ZP_03928593.1| predicted protein [Acidaminococcus sp. D21]
gi|226903905|gb|EEH89823.1| predicted protein [Acidaminococcus sp. D21]
Length = 369
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GG 152
+ I L L + C + CR+C + +V ++ + E E+ GG
Sbjct: 10 NTIFLMLGNGCNMNCRYCLQHPLVEKSLSGHVNPDVYRFIRQVVDENDDKTELGLHFYGG 69
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+PLI +++++ L+ V+ +RF + I + + I E+++ P+Y+ I
Sbjct: 70 EPLIY-FPLMKEIIGKLKD---VKGIRFST---ISNGKAITDEMVELFN--SLPLYVCIS 120
>gi|153873510|ref|ZP_02002070.1| radical SAM family protein [Beggiatoa sp. PS]
gi|152070023|gb|EDN67929.1| radical SAM family protein [Beggiatoa sp. PS]
Length = 356
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 60/165 (36%), Gaps = 30/165 (18%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFT 150
YP +++ + C + C++CF Q+ ++ A + + +I F
Sbjct: 9 YPSVVVVNITTACNLRCKYCFADCEPSQQRE-DMTEDVMLAIIREMLVLPESEIITFEFQ 67
Query: 151 GGDPLILSHKRLQKVLKTLRYI-----KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GG+P L+ +++ + + K V+ R S + I ELI LK+
Sbjct: 68 GGEP-TLNIVGIERFISIAEQLKTSSNKTVK-YRIESNGTV-----ITDELITLLKKYNM 120
Query: 206 PVYIAIHANHPYEFSEEAI-------------AAISRLANAGIIL 237
+ I + P + + A I +L GI +
Sbjct: 121 EIGI--SIDGPMDMTNNARVYEDGTGAFTDIENGIKKLHENGIKV 163
>gi|89894712|ref|YP_518199.1| hypothetical protein DSY1966 [Desulfitobacterium hafniense Y51]
gi|123279971|sp|Q24W37|RIMO_DESHY RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|89334160|dbj|BAE83755.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 445
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 71/219 (32%), Gaps = 34/219 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTG 151
+K+ C YC +C + S+ E+ L ++ + EV+
Sbjct: 148 KQYAYVKVAEGCDNYCTYC-----IIPHVRGHFRSRTQESILREVEAMASEGVKEVLLIA 202
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D R L ++K + I+ ++ +R P+ ELI +KE K
Sbjct: 203 QDTTRYGKDRYGEYRLPSLIKEIARIEGIEWIRL----MYCYPELFTDELITVMKETPKV 258
Query: 207 V-YIAIHANHPY-----EFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
Y+ + H + E + EA I +L + ++ ++ G + E
Sbjct: 259 CRYLDLPLQHAHDKVLAEMNRRGTIREAEGLIHKLRQEIPDIRLRTTMITGFPGETEEEF 318
Query: 256 NLM------RTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
+ F L Y AA ++ E
Sbjct: 319 QAVVEFAKKIRFDRLGAFAYSQEESTPAAQRED-QVPEE 356
>gi|325831056|ref|ZP_08164380.1| radical SAM domain protein [Eggerthella sp. HGA1]
gi|325486977|gb|EGC89423.1| radical SAM domain protein [Eggerthella sp. HGA1]
Length = 475
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 19/130 (14%)
Query: 90 VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQ 143
RY +R + + C CR C+ S L D + + ++
Sbjct: 86 YRRYQNRFVRTAHWSITGKCNYRCRHCY-----MSAPDAKLGEIDHDTMMDLARQIADCG 140
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I EV TGG+PL+ +++ L + ++I + ++ + ++ +L+ L+E
Sbjct: 141 ILEVSLTGGEPLVRRD--FMELVDALLSYR-IRIAQIYTNG-----KLVDEKLLDQLEER 192
Query: 204 GKPVYIAIHA 213
+
Sbjct: 193 EIRPEFNMSY 202
>gi|317488970|ref|ZP_07947500.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
gi|316912044|gb|EFV33623.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
Length = 529
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 19/130 (14%)
Query: 90 VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQ 143
RY +R + + C CR C+ S L D + + ++
Sbjct: 140 YRRYQNRFVRTAHWSITGKCNYRCRHCY-----MSAPDAKLGEIDHDTMMDLARQIADCG 194
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I EV TGG+PL+ +++ L + ++I + ++ + ++ +L+ L+E
Sbjct: 195 ILEVSLTGGEPLVRRD--FMELVDALLSYR-IRIAQIYTNG-----KLVDEKLLDQLEER 246
Query: 204 GKPVYIAIHA 213
+
Sbjct: 247 EIRPEFNMSY 256
>gi|229163720|ref|ZP_04291667.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
R309803]
gi|228619782|gb|EEK76661.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
R309803]
Length = 339
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G +L+ + E LA + + ++ TGG+PL
Sbjct: 22 VIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LAKLFVSIGVRKIRLTGGEPL 80
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ + K++ L I + + + + Q
Sbjct: 81 LRKD--VTKLIARLVKIDGLVDIGLTTNAIHLTKQ 113
>gi|146342266|ref|YP_001207314.1| nitrogenase FeMo cofactor biosynthesis protein NifB [Bradyrhizobium
sp. ORS278]
gi|146195072|emb|CAL79097.1| Nitrogenase FeMo cofactor biosynthesis protein NifB [Bradyrhizobium
sp. ORS278]
Length = 520
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 24/189 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + + LA Q+
Sbjct: 70 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLSPEQAAKKVLAVASTIPQM 129
Query: 145 WEVIFTG-GDPL---------------ILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIV 187
+ G GDPL +L L HV + F+ +
Sbjct: 130 TVLGIAGPGDPLANPEKTFKTFELIARTAPDIKLCLSTNGLALPDHVDTIAGFNVDHVTI 189
Query: 188 DPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
++PE+ + ++ + + L GI+ SV++ G
Sbjct: 190 TINMVDPEIGAKIYPWVFWKHKRYTGVEAAKLLTDRQLQGLEMLTERGILCKVNSVMIPG 249
Query: 247 INDDPEILA 255
+ND +
Sbjct: 250 VNDKHLVEV 258
>gi|325479090|gb|EGC82190.1| iron-only hydrogenase maturation rSAM protein HydG [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 472
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L +ED + + K + ++ Y +RI+L + C C +C
Sbjct: 51 SHREAFVLLSCKEDDLNEEIFKLAKELKYKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ LS ++ + +Q++ + G DP+ + + + + T+ IKH
Sbjct: 111 NRTIPRRKLSQEEIREQVIALQDQGHKRLALEAGEDPVNNPLEYILESIHTIYNIKHKNG 170
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 171 AIRRVNVNIAATTVENYR 188
>gi|322372738|ref|ZP_08047274.1| putative coenzyme PQQ synthesis protein [Streptococcus sp. C150]
gi|321277780|gb|EFX54849.1| putative coenzyme PQQ synthesis protein [Streptococcus sp. C150]
Length = 372
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 40/119 (33%), Gaps = 10/119 (8%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP + + + + C + C +C + K +S + ++ + V TGG
Sbjct: 7 YPLLVDVCVTNRCNLNCSYCSAEAGPFASKKGEMSVEKLDSVFRELDLMGVPR-VGVTGG 65
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+P + +L L+ + ++V + I + + L +
Sbjct: 66 EPFMRED-----ILDILKAFNQYRF----AKVLNTNGNLITDSIARELSKLNLDRICVT 115
>gi|291459649|ref|ZP_06599039.1| putative heme biosynthesis protein [Oribacterium sp. oral taxon 078
str. F0262]
gi|291417681|gb|EFE91400.1| putative heme biosynthesis protein [Oribacterium sp. oral taxon 078
str. F0262]
Length = 432
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
++ + + + C + C CF + ++ L ++ A + I+E + + +++ +GG+
Sbjct: 106 KKKVHITMTNNCNMRCPHCFVSAGIVEKQE--LKVEEILAVVERIKEINGLTDIVVSGGE 163
Query: 154 PLILS 158
PLI S
Sbjct: 164 PLIHS 168
>gi|225869329|ref|YP_002745277.1| radical SAM protein [Streptococcus equi subsp. zooepidemicus]
gi|225702605|emb|CAX00633.1| Radical SAM superfamily protein [Streptococcus equi subsp.
zooepidemicus]
Length = 372
Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 40/119 (33%), Gaps = 10/119 (8%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP + + + + C + C +C + K +S + ++ + V TGG
Sbjct: 7 YPLLVDVCVTNRCNLNCSYCSAEAGPFASKKGEMSVEKLDSVFRELDLMGVPR-VGVTGG 65
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+P + +L L+ + ++V + I + + L +
Sbjct: 66 EPFMRED-----ILDILKAFNQYRF----AKVLNTNGNLITDSIARELSKLNLDRICVT 115
>gi|268679888|ref|YP_003304319.1| MiaB-like tRNA modifying enzyme [Sulfurospirillum deleyianum DSM
6946]
gi|268617919|gb|ACZ12284.1| MiaB-like tRNA modifying enzyme [Sulfurospirillum deleyianum DSM
6946]
Length = 414
Score = 41.4 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 12/135 (8%)
Query: 89 IVHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
IVH Y + +K+ C C +C + + + E
Sbjct: 124 IVHEYTGKTKAFIKIQEGCNFRCSYCI--IPFVRGNARSQDEQKIIEQVEKLALNGY-GE 180
Query: 147 VIFTGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ TG + + L ++++ L I+ V+ +R S ++P +I+ + L E
Sbjct: 181 FVLTGTNIGSYGKDKGSSLGRLVQRLGAIRGVRRIRLGS----IEPVQIDESFREILNEP 236
Query: 204 GKPVYIAIHANHPYE 218
++ I H E
Sbjct: 237 WLERHLHIALQHTSE 251
>gi|167647821|ref|YP_001685484.1| molybdenum cofactor biosynthesis protein A [Caulobacter sp. K31]
gi|167350251|gb|ABZ72986.1| molybdenum cofactor biosynthesis protein A [Caulobacter sp. K31]
Length = 325
Score = 41.4 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 32/97 (32%), Gaps = 4/97 (4%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G R+ L + VC C +C S L+ + + + + ++
Sbjct: 7 GFGRRFRYLRLS-VTEVCNYRCTYCLPDGFKKSGTMAFLTPDEIDRVVRAFAS-FGVAKL 64
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
TGG+P + L +++ + + +
Sbjct: 65 RLTGGEPSVRRD--LVEIIARAAATPGIDKVAVTTNG 99
>gi|145590325|ref|YP_001152327.1| putative molybdenum cofactor biosynthesis protein A [Pyrobaculum
arsenaticum DSM 13514]
gi|145282093|gb|ABP49675.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum arsenaticum DSM 13514]
Length = 310
Score = 41.4 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 75/211 (35%), Gaps = 8/211 (3%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
++ + C C FC + Q G+ L+++D ++ + + + TGG+P
Sbjct: 11 QKLRYVVNDECNYNCVFCHFEGQLRRQ-GSYLTAEDYGFVSSFFRS-LGVADFKITGGEP 68
Query: 155 LILSH-KRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIH 212
L+ + + V + R + + L + Y I
Sbjct: 69 LLRRDIDLIVANVAKTGAYVTVTTNGYLLRGWVDKLRKAGVARLNVSVHTTDPEKYAKIT 128
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+ P E + ++ + G+ L V+L+ IN D + + L++ L ++
Sbjct: 129 STSPA-VFREVMRGLAEARDRGLSLKLNVVVLRDINTDRQSVKELVKLAARLGASLQFIE 187
Query: 273 HPDLAAGTSHFR---LTIEEGQKIVASLKEK 300
+GT F IE +IV L +
Sbjct: 188 LMPTGSGTKIFDNLFEPIESIVEIVTQLGGR 218
>gi|301785101|ref|XP_002927965.1| PREDICTED: molybdenum cofactor biosynthesis protein 1-like
[Ailuropoda melanoleuca]
Length = 636
Score = 41.4 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K + ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKADLLTTEEILTLARLFVKEGVDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVARLHQLEGLRTIGITTNGI 158
>gi|291556571|emb|CBL33688.1| SSU ribosomal protein S12P methylthiotransferase [Eubacterium
siraeum V10Sc8a]
Length = 446
Score = 41.4 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 37/204 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
P L++ C C +C + S+ E + + ++ + E++
Sbjct: 146 PHYAYLRIADGCSNKCSYCA-----IPLIRGKMRSRKMENIIEEAKKFAENGVKELVIVA 200
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L +LK L I ++ +R P+R+ ELI+ +K K
Sbjct: 201 QDVTAYGIDLYKKYALPDLLKQLCKIDGIKWIRL----LYCYPERMTDELIETIKTEDKV 256
Query: 207 V-YIAIHANHP-YEF---------SEEAIAAISRLANA--GIILLSQSVLLKGI-NDDPE 252
+ YI I H E + ++L G++L + L+ G + E
Sbjct: 257 LNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITGFPGETEE 314
Query: 253 ILANLMR-----TFVELRIKPYYL 271
+ L F L Y
Sbjct: 315 QFSELAEFVNDIKFERLGCFAYSA 338
>gi|281353482|gb|EFB29066.1| hypothetical protein PANDA_017831 [Ailuropoda melanoleuca]
Length = 605
Score = 41.4 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K + ++
Sbjct: 28 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKADLLTTEEILTLARLFVKEGVDKI 84
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L ++ ++ + +
Sbjct: 85 RLTGGEPLIRPDVV--DIVARLHQLEGLRTIGITTNGI 120
>gi|167750131|ref|ZP_02422258.1| hypothetical protein EUBSIR_01100 [Eubacterium siraeum DSM 15702]
gi|167656874|gb|EDS01004.1| hypothetical protein EUBSIR_01100 [Eubacterium siraeum DSM 15702]
Length = 446
Score = 41.4 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 37/204 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
P L++ C C +C + S+ E + + ++ + E++
Sbjct: 146 PHYAYLRIADGCSNKCSYCA-----IPLIRGKMRSRKMENIIEEAKKFAENGVKELVIVA 200
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L +LK L I ++ +R P+R+ ELI+ +K K
Sbjct: 201 QDVTAYGIDLYKKYALPDLLKQLCKIDGIKWIRL----LYCYPERMTDELIETIKTEDKV 256
Query: 207 V-YIAIHANHP-YEF---------SEEAIAAISRLANA--GIILLSQSVLLKGI-NDDPE 252
+ YI I H E + ++L G++L + L+ G + E
Sbjct: 257 LNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITGFPGETEE 314
Query: 253 ILANLMR-----TFVELRIKPYYL 271
+ L F L Y
Sbjct: 315 QFSELAEFVNDIKFERLGCFAYSA 338
>gi|148643466|ref|YP_001273979.1| molybdenum cofactor biosynthesis protein A [Methanobrevibacter
smithii ATCC 35061]
gi|89953725|gb|ABD83341.1| MoaA [Methanobrevibacter smithii]
gi|148552483|gb|ABQ87611.1| molybdopterin cofactor biosynthesis protein A, MoaA
[Methanobrevibacter smithii ATCC 35061]
Length = 309
Score = 41.4 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 27/197 (13%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+Y IL + + C C +C M +++ + I + + ++
Sbjct: 9 KYERPILSLRITITNKCNENCLYCHHDGM--DDSQEEMNADEIYRICE-IAKNIGVRKIR 65
Query: 149 FTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQ-------RINPELIQC 199
+GG+PLI + +++ + + + I + + R+N L
Sbjct: 66 ISGGEPLIRKD--IVEIVSKIASLDFDDISITSNGTLLGKYAKDLKEAGLNRVNISLDTL 123
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258
E K V N E + I + G+ + VL+KGIN++ + ++
Sbjct: 124 NPETYKKV---TTKN----LLESSKNGILKAVEVGLYPVKINMVLMKGINEN--EVDDMF 174
Query: 259 RTFVELRIKPYYLHHPD 275
E I + D
Sbjct: 175 EFCKEHGIILQLIELMD 191
>gi|260587855|ref|ZP_05853768.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
gi|260542120|gb|EEX22689.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
Length = 446
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------- 150
LK+ C C +C ++ G+ + + + Y+ + E+I
Sbjct: 148 YLKIAEGCDKRCTYCIIPKLRGNY--RSIPMEQLISQAEYLAG-QGVRELILVAQETTVY 204
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYI 209
G D I K L K+LK L I +Q +R P+ I PELIQ +KE K Y+
Sbjct: 205 GKD--IYGKKCLHKLLKELCKIPGIQWIRI----LYCYPEEIYPELIQTMKEEKKICHYL 258
Query: 210 AIHANH 215
+ H
Sbjct: 259 DLPIQH 264
>gi|331083857|ref|ZP_08332966.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 6_1_63FAA]
gi|330403282|gb|EGG82842.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 6_1_63FAA]
Length = 446
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------- 150
LK+ C C +C ++ G+ + + + Y+ + E+I
Sbjct: 148 YLKIAEGCDKRCTYCIIPKLRGNY--RSIPMEQLISQAEYLAG-QGVRELILVAQETTVY 204
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYI 209
G D I K L K+LK L I +Q +R P+ I PELIQ +KE K Y+
Sbjct: 205 GKD--IYGKKCLHKLLKELCKIPGIQWIRI----LYCYPEEIYPELIQTMKEEKKICHYL 258
Query: 210 AIHANH 215
+ H
Sbjct: 259 DLPIQH 264
>gi|315452778|ref|YP_004073048.1| MiaB-like tRNA modifying protein [Helicobacter felis ATCC 49179]
gi|315131830|emb|CBY82458.1| MiaB-like tRNA modifying enzyme,2-methylthioadenine synthetase
[Helicobacter felis ATCC 49179]
Length = 418
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C C +C + G + + + L ++ + I E++ TG
Sbjct: 132 KTRAFVKIQEGCDFKCSYCVIPLVRGKSRSLIE-----DQILDQVRVLAQKGIVEIVLTG 186
Query: 152 GDPLILSHK---RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKP 206
+ + + ++++ + I+ ++ +R S ++P +I+ E ++ L K
Sbjct: 187 TNVGSYGKETRSNIARLIQKIARIEGIKRVRIGS----LEPSQIDAEFLELLDHPILEKH 242
Query: 207 VYIAIHANH 215
++IA+ +H
Sbjct: 243 LHIALQHSH 251
>gi|257065789|ref|YP_003152045.1| thiamine biosynthesis protein ThiH [Anaerococcus prevotii DSM
20548]
gi|256797669|gb|ACV28324.1| biotin and thiamin synthesis associated [Anaerococcus prevotii DSM
20548]
Length = 472
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L +E+ + + K + H+ Y +RI+L + C C +C
Sbjct: 51 SHREAFVLLSCKEEDLNAEIFNLAKELKHKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ LS ++ + +Q+ + G DP+ + + + + T+ IKH
Sbjct: 111 NRTIPRRKLSQEEIREQVIALQDLGHKRLALEAGEDPVNNPLEYILESIDTIYNIKHKNG 170
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 171 AIRRVNVNIAATTVENYR 188
>gi|212704636|ref|ZP_03312764.1| hypothetical protein DESPIG_02699 [Desulfovibrio piger ATCC 29098]
gi|212672035|gb|EEB32518.1| hypothetical protein DESPIG_02699 [Desulfovibrio piger ATCC 29098]
Length = 335
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 20/176 (11%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G RY L C + C +C VL ++ + ++ +
Sbjct: 10 HGRTVRYLRLSL---TDRCNLRCLYCHSNARHQCIPHEKVLRYEEMIRLVQIVRGM-GVG 65
Query: 146 EVIFTGGDPLILS--HKRLQKVLKTLRYIKHVQILRFHSRVPIV-----DPQRINPELIQ 198
+V TGG+P L ++ + + +R + ++ QRI +
Sbjct: 66 KVRLTGGEPFARKGCDDFLLRLRQRFDDLD----IRITTNGTLLEEHIPLLQRIRISAVN 121
Query: 199 C-LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + + + + E + A+ + AGI + +V L+GIND
Sbjct: 122 LSLDSFDRETFARVTG---RDMLPEVLRALDAMLAAGIRVKINAVGLRGINDSQMA 174
>gi|319795394|ref|YP_004157034.1| radical SAM protein [Variovorax paradoxus EPS]
gi|315597857|gb|ADU38923.1| Radical SAM domain protein [Variovorax paradoxus EPS]
Length = 212
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 53/165 (32%), Gaps = 20/165 (12%)
Query: 79 GDNNHSPLKGIVHRYPDRILLK--LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
G+ + + + R+ L CRFC + VG+ K +
Sbjct: 14 GEGGQAGMPAVFCRFAGCNLWTGREEDRASAVCRFCDT-DFVGTDGTLGGKFKTADQLAD 72
Query: 137 YIQ-----EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDP 189
I ++ V+ TGG+PL+ L L H + R S + P
Sbjct: 73 TIAAQWPANDAEHRLVVLTGGEPLLQVDAALVDAL-------HARRFRIAVESNGTVAAP 125
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
+ I+ + +AG P ++ + + +A G
Sbjct: 126 EGID--WLCISPKAGAP-WVQQRGQELKLVWPQTAFDLDAMARTG 167
>gi|84687002|ref|ZP_01014885.1| radical SAM domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664976|gb|EAQ11457.1| radical SAM domain protein [Rhodobacterales bacterium HTCC2654]
Length = 315
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 14/174 (8%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
EDP + SP + +P+ + +C + C C+ + ++ +
Sbjct: 14 EDPKVTADGSPRATVALTHPETLWFNTGTLCNITCEGCYIESSPTNDALAYMTRGEVAGY 73
Query: 135 LAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
L I+ + + E+ FTGG+P + + L ++L + + + +
Sbjct: 74 LDQIKARGWPVTEIGFTGGEPFMNPDFP-AMMRDALSA--GYEVLVLTNAMAPMMRPLVR 130
Query: 194 PELIQCLKEAGKPVYIAIHANHP-YEFSEEAI---------AAISRLANAGIIL 237
+L Q LK + + + +H E + + L + G +
Sbjct: 131 TKLAQLLKGFAGRITLRVSMDHWTAEGHDAVRGKGSFAATLKGLDWLRDEGATI 184
>gi|290769880|gb|ADD61651.1| putative protein [uncultured organism]
Length = 502
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + + ++S + + AL ++ E S EV F GG+PL
Sbjct: 104 LHVAHTCNLNCSYCFAAQGKFHGEAGLMSFETGKRALDFLIEHSGTRRNLEVDFFGGEPL 163
Query: 156 ILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
++ + ++++ R I +H + RF + I E+I + V +
Sbjct: 164 -MNFEVCKQLVAYARSIEKEHNKNFRFT---MTTNGIGITDEVIDWCNKECHNVVL 215
>gi|296198097|ref|XP_002746562.1| PREDICTED: molybdenum cofactor biosynthesis protein 1 [Callithrix
jacchus]
Length = 385
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K + ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVQLTPKANLLTTEEILTLARLFVKEGVDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVAQLQQLEGLRTIGVTTNGI 158
>gi|71065178|ref|YP_263905.1| molybdenum cofactor biosynthesis protein A [Psychrobacter arcticus
273-4]
gi|71038163|gb|AAZ18471.1| GTP cyclohydrolase subunit MoaA [Psychrobacter arcticus 273-4]
Length = 369
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C G + LS + + + +V TGG+P I
Sbjct: 63 ITDFCNFRCEYCLPNGYQGKRPDDELSVSEIATLIRGFAQ-VGTRKVRITGGEPSIRRDV 121
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
+++T++ ++ + S
Sbjct: 122 V--DIIQTIKQTPGIETVAMTSNG 143
>gi|302386178|ref|YP_003822000.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
gi|302196806|gb|ADL04377.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
Length = 337
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 73/215 (33%), Gaps = 40/215 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C+ C++ G++K L++++ + + I + +IF+GG+PL+
Sbjct: 3 VSWMTTNQCNLKCKHCYQDA--GNKKTDELTTEEAKRLIDEIAR-AGFRIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ TL LR F + + I E LK+ K + I +
Sbjct: 60 RPD------IFTLVSYAAGAGLRPVFGTNGML-----ITEETAIRLKKC-KAAVMGISLD 107
Query: 215 HPYE--------------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
E + E I + AG+ + ++ ++ E + +
Sbjct: 108 SLDEQKHNKFRGDENAYRLTLEGIGNCKK---AGLPFQIHTTIMDWNQEEVEAIID---F 161
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
++ YL E K++
Sbjct: 162 GMQSGAVANYLFFLIPVGRGRFL---EETSLKVME 193
>gi|225874256|ref|YP_002755715.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
gi|225792393|gb|ACO32483.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
Length = 374
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 77/229 (33%), Gaps = 28/229 (12%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ HS + P + ++ CP+ CR C R E V L+ ++ L I
Sbjct: 10 HPHSGKPLDYTQNPMIVYWEMTQACPLACRHC-RAEAVTMPHPCELNYDESRDLLRQIAA 68
Query: 141 --KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELI 197
+ +I TGGDPL L ++ R + V I S+ ++ QR
Sbjct: 69 FGDPKPH-LILTGGDPLQRLD--LFSLIDEARDLGISVSITPAASKNLTLEKQR------ 119
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAI-------AAISRLAN---AGIILLSQSVLLKGI 247
LKE G E + + L + AG + +++ +
Sbjct: 120 -ELKEHGIDSLGLSLDGSTAERHDAVRCVEGCFEQTLRALRDAATAGFPVQVNTLVSEET 178
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR-LTIEEGQKIVA 295
DD + L + + + L + ++ + G+ ++
Sbjct: 179 VDDLPAVYEL---LKQHEVMRWSLFFLIAVGRGRTLQPISAQHGENLMR 224
>gi|187932848|ref|YP_001886192.1| thiamine biosynthesis protein ThiH [Clostridium botulinum B str.
Eklund 17B]
gi|187721001|gb|ACD22222.1| putative thiazole biosynthesis protein [Clostridium botulinum B
str. Eklund 17B]
Length = 472
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E IL E + + H K I + Y +RI++ + C C +C
Sbjct: 49 SHREAAILLECDLEEEIEKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQ 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
L+ ++ + + +Q+ + TG DP+ + + + +KT+ IKH
Sbjct: 109 NKHISRKKLTQEEIKREVIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + V+ R
Sbjct: 169 AIRRANVNIAATTVENYR 186
>gi|1361913|pir||S57481 molybdopterin biosynthesis protein moaA - Methanobacterium
thermoautotrophicum (strain Marburg) (fragment)
gi|871467|emb|CAA61207.1| moaA [Methanothermobacter thermautotrophicus]
Length = 87
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HR P L + + C V C +C R ++ S + +S +D E + + ++
Sbjct: 7 HRRPLVSLRISVTGRCNVSCIYCHRDGILRSDEE--MSPEDIENICR-VASDLGVKKIRL 63
Query: 150 TGGDPLILSHKRLQKVLKTLRYI 172
+GG+PLI + ++++ + I
Sbjct: 64 SGGEPLIRDD--IVEIVEKINSI 84
>gi|312135098|ref|YP_004002436.1| RNA modification enzyme, miab family [Caldicellulosiruptor
owensensis OL]
gi|311775149|gb|ADQ04636.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
owensensis OL]
Length = 434
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 28/232 (12%), Positives = 78/232 (33%), Gaps = 29/232 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C +C +C G+ + L + E + + E + TG
Sbjct: 141 RSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSL--ESIEEEVRRLVSNGY-KEFVITGIN 197
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + L V++ + I+ V+ +R S P++ ++ L+ +
Sbjct: 198 ISAYGKD--LDGKITLIDVIERINEIEGVKRIRLSSLEPLIMSEQFISRLLS-FDKLCHH 254
Query: 207 VYIAIH--------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANL 257
+++++ + + + + + R+ + + ++ G + E
Sbjct: 255 LHLSLQSGSDKILKFMNRHYTTAQYQDIVDRIKEKWDDVAFTTDIIVGFPGETEEDFNAT 314
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLT-------IEEGQKIVASLKEKIS 302
+ ++ ++ GT + + E K++ + +S
Sbjct: 315 LEFVQKIGFSRIHVFRFSPKKGTKAYDMPNQVDSKEKERRSKVMKEVAANLS 366
>gi|78189894|ref|YP_380232.1| Elongator protein 3/MiaB/NifB [Chlorobium chlorochromatii CaD3]
gi|78172093|gb|ABB29189.1| GTP cyclohydrolase subunit MoaA [Chlorobium chlorochromatii CaD3]
Length = 333
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 101 LLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C + +LS+ + + + + I ++ FTGG+PL+ S
Sbjct: 26 VTSACNLRCGYCLSEAHEPATLHQPLLSTAELCTIIELLAKH-GIQKLRFTGGEPLLRSD 84
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRV 184
+ ++ R ++ + +
Sbjct: 85 --IVALIAMARQHSSIRTIGLTTNG 107
>gi|325968873|ref|YP_004245065.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
gi|323708076|gb|ADY01563.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 362
Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 79/262 (30%), Gaps = 58/262 (22%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EEL + G V + ++L +VC + CRFC + G +
Sbjct: 22 DIEELFKADLWELGSAAEYLTRKYFGNVVTFIPNMILNYTNVCVIACRFCAFYRLPGHPE 81
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
LS+++ + I + I +V+ GG + I+
Sbjct: 82 AYTLSAEEALRRVMAIDREFGIRQVLIQGG-------------INPELDIE--------- 119
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA-------ISRLANAGI 235
L + LK V I H P E A + RL +G+
Sbjct: 120 ---------YYERLFKALKAKLPHVAI--HGLSPIEIDYLARKHRMSYRETLDRLRESGM 168
Query: 236 ---------ILLSQSV-LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
IL+ + ++ D + N+M T ++ I H
Sbjct: 169 DTLAGGGGEILVDRVRKIIAPHKIDTDTWLNIMETAHKMGIMSNATMM------YGHVET 222
Query: 286 TIEEGQKIVA--SLKEKISGLC 305
++ + + L+++ G
Sbjct: 223 ISDQAEHLYRIIELQKRTHGFL 244
>gi|324509309|gb|ADY43919.1| Molybdenum cofactor biosynthesis protein 1 [Ascaris suum]
Length = 571
Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y + + + C + C +C E V L + D LA I + + +
Sbjct: 52 YGRHHTY---LRISIAEKCNLRCTYCMPEEGVPLSPSHNLLNADEIVRLATIFAANGVTK 108
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ TGG+P + + ++ L I + + + +
Sbjct: 109 IRLTGGEPTLRKD--IVDIVGRLASIPGINQVGMTTNGIAL 147
>gi|163858381|ref|YP_001632679.1| heme biosynthesis protein [Bordetella petrii DSM 12804]
gi|163262109|emb|CAP44411.1| heme biosynthesis protein [Bordetella petrii]
Length = 396
Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ LL C + C+ C+ + + + + + + + + +I +GG+
Sbjct: 30 PPVVIWNLLRRCNLTCKHCYATSADSPFRNELNTEEAL-RVIDDLH-DAGVRVLILSGGE 87
Query: 154 PLILSHKRLQKVLKTLRYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
PL+ L L V+ + S ++D I Y+ I
Sbjct: 88 PLLRPD------LFQLAGHARVKGFFVALSSNGTLIDAHNIEQIAAAQFD------YVGI 135
Query: 212 HANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ E + A+ AI GI + ++ L + ++ + LMR
Sbjct: 136 SIDGLQEVHDAWRQMPGSFAAAMRAIDLCRRHGIRVGLRTTLTQHNSEQLPAILGLMR-- 193
Query: 262 VELRIKPYYLHHP 274
E ++ +YL H
Sbjct: 194 -EHGVQKFYLSHL 205
>gi|118474280|ref|YP_892031.1| hypothetical protein CFF8240_0856 [Campylobacter fetus subsp. fetus
82-40]
gi|118413506|gb|ABK81926.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus
82-40]
Length = 413
Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 53/129 (41%), Gaps = 18/129 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L+ A+ Y E++
Sbjct: 130 HTKAFIKIQEGCNFKCSYCIIPSVRGKSRSIDEEVILNEAKILASNGY-------NEIVL 182
Query: 150 TGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + ++ L K+L+ L IK ++ +R S ++P +I+ + L+E+
Sbjct: 183 TGTNIGSYGEEKSSSLGKLLQKLGSIKGIKRIRLGS----IEPSQIDESFREILQESWLE 238
Query: 207 VYIAIHANH 215
++ I H
Sbjct: 239 KHLHIALQH 247
>gi|251778072|ref|ZP_04820992.1| putative thiazole biosynthesis protein [Clostridium botulinum E1
str. 'BoNT E Beluga']
gi|243082387|gb|EES48277.1| putative thiazole biosynthesis protein [Clostridium botulinum E1
str. 'BoNT E Beluga']
Length = 472
Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E IL E D + H K I + Y +RI++ + C C +C
Sbjct: 49 SHREAAILLECDLDEEIEKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQ 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
L+ ++ + + +Q+ + TG DP+ + + + +KT+ IKH
Sbjct: 109 NKHISRKKLTQEEIKREVIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKH 165
>gi|223985672|ref|ZP_03635720.1| hypothetical protein HOLDEFILI_03026 [Holdemania filiformis DSM
12042]
gi|223962363|gb|EEF66827.1| hypothetical protein HOLDEFILI_03026 [Holdemania filiformis DSM
12042]
Length = 439
Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 26/191 (13%)
Query: 46 LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVC 105
LI+ RQ + E I+ + PL H R LK+ C
Sbjct: 114 LIDEA------LRQ----RRE-PIVELHDVRTSAEFEMLPLDEFEH--QTRAYLKVQDGC 160
Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
+C +C G ++ L + + A Q+ +I G L +
Sbjct: 161 NQFCAYCIIPYARGRERSLPL-DEALKEARRLAQKHKEIVLAGIHTGRYGKDRDTSLCDL 219
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
++ + I+ ++ +R S I EL+ L E + +H
Sbjct: 220 IRGMCEIEPLERIRISSIEIT----EITDELLT-LMETQPKIARHLHI-------PLQAG 267
Query: 226 AISRLANAGII 236
+ L G
Sbjct: 268 CDATLKRMGRP 278
>gi|149186315|ref|ZP_01864628.1| molybdenum cofactor biosynthesis protein A [Erythrobacter sp.
SD-21]
gi|148829904|gb|EDL48342.1| molybdenum cofactor biosynthesis protein A [Erythrobacter sp.
SD-21]
Length = 345
Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C C +C V LS ++ A++ +W++ TGG+P +
Sbjct: 37 LTDRCNFRCSYCLPNGFVKQDGLPPELSREELRRAVSAFAR-LGLWKLRLTGGEPTVRRD 95
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRV 184
++ + L ++ ++ + +
Sbjct: 96 --FTEIARYLASVEGIRRVAMTTNG 118
>gi|83952182|ref|ZP_00960914.1| radical SAM domain protein [Roseovarius nubinhibens ISM]
gi|83837188|gb|EAP76485.1| radical SAM domain protein [Roseovarius nubinhibens ISM]
Length = 327
Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 53/145 (36%), Gaps = 4/145 (2%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
DP P + +P+ + +C + C C+ + + ++ + A
Sbjct: 25 SDPAVTAKGEPRASVPLSHPETLWFNTGTLCNITCVNCYIESSPNNDRLVYITEPEMRAY 84
Query: 135 LAYI-QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
L + + E+ FTGG+P + + + ++L + + + + +
Sbjct: 85 LDELTARNWPVREIAFTGGEPFMNPEMC---AMARTALARGYEVLILTNAMRPMMRKSVQ 141
Query: 194 PELIQCLKEAGKPVYIAIHANHPYE 218
EL + + G + + I +H E
Sbjct: 142 AELAALIADYGPRLTLRISLDHWSE 166
>gi|163816750|ref|ZP_02208113.1| hypothetical protein COPEUT_02940 [Coprococcus eutactus ATCC 27759]
gi|158448007|gb|EDP25002.1| hypothetical protein COPEUT_02940 [Coprococcus eutactus ATCC 27759]
Length = 450
Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 23/143 (16%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ + + G V R +K+ C +C +C + + S+ EA +A +
Sbjct: 142 ETEYEEMGGHVPVGHTRAYVKIQDGCNQFCSYC-----IIPYVRGRIRSRSEEAVIAEVT 196
Query: 140 --EKSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+S I EV+ TG D + L ++ + IK ++ +R S ++P
Sbjct: 197 ELAESGIKEVVLTGIHISSYGKD--KNNEGALIDLIDAISKIKGIKRIRLGS----LEPG 250
Query: 191 RINPELIQCLKEAGKPVYIAIHA 213
I + ++ + K + H
Sbjct: 251 IITEDFVRRVSANKK---VCPHF 270
>gi|16331653|ref|NP_442381.1| molybdenum cofactor biosynthesis protein A [Synechocystis sp. PCC
6803]
gi|3024143|sp|Q55369|MOAA_SYNY3 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|1001211|dbj|BAA10451.1| molybdenum cofactor biosynthesis protein A [Synechocystis sp. PCC
6803]
Length = 327
Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 78/211 (36%), Gaps = 21/211 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C + C +C + + ++ + LS ++ + + + EV TGG+PL+ +
Sbjct: 33 LTDQCNLRCHYCMPVDAIFLEQSSYLSCQEYGEIIGELIA-LGLEEVRLTGGEPLLRRN- 90
Query: 161 RLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCL-------KEAGKPVYIAI 211
+ +R I +++ + + ++D L K
Sbjct: 91 ----FTEIVRAIGQLKLKKIGLTTNGIVLDRHLDTLGENNVLDLNVSLDSLNAKTFSEIT 146
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H N + + + G + +V+++ IND + +L+ ++ +L
Sbjct: 147 HRNCLNTI----LRNLELASRQGFKIKLNTVVMREIND--REIFDLIEYAKRWEMEIRFL 200
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
+ H T Q+++A +++K S
Sbjct: 201 EIMRIGYACRHQEKTFISAQELLAKIQQKYS 231
>gi|322379439|ref|ZP_08053809.1| Radical SAM [Helicobacter suis HS1]
gi|322380950|ref|ZP_08055016.1| MiaB-like rRNA/tRNA modification protein [Helicobacter suis HS5]
gi|321146622|gb|EFX41456.1| MiaB-like rRNA/tRNA modification protein [Helicobacter suis HS5]
gi|321148148|gb|EFX42678.1| Radical SAM [Helicobacter suis HS1]
Length = 419
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 56/156 (35%), Gaps = 9/156 (5%)
Query: 63 QKEELNILPEEREDPIGDNN-HSPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMVG 119
KEE+N L +E++ ++ + ++ + R +K+ C C +C + G
Sbjct: 99 HKEEINALLQEKQGFFHEDKQECLDQILLSNFVGKTRAFVKIQEGCDFRCSYCIIPTVRG 158
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIKHVQ 176
L+ + + + + + EV+ TG + R L ++ + + ++
Sbjct: 159 QS--RSLNQDHVLKQIEMLSQ-AGVLEVVLTGTNVGSYGLDRGTNLAHLILKIADLTPIK 215
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+R S P L + E + +
Sbjct: 216 RVRIGSLEPSQINTEFLELLDHPILERHLHIALQHS 251
>gi|182420408|ref|ZP_02951630.1| molybdenum cofactor biosynthesis protein A [Clostridium butyricum
5521]
gi|237669106|ref|ZP_04529090.1| molybdenum cofactor biosynthesis protein A [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182375774|gb|EDT73372.1| molybdenum cofactor biosynthesis protein A [Clostridium butyricum
5521]
gi|237657454|gb|EEP55010.1| molybdenum cofactor biosynthesis protein A [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 327
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 93 YPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +I + C + C +C + + +LS ++ + I +V
Sbjct: 5 YKRKIDYIRISITDRCNLRCVYCMPENGINLVKHDDILSYEEIIRLCRMFSK-LGISKVK 63
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
TGG+PL+ K++K ++ ++ ++ + + I+ I+
Sbjct: 64 ITGGEPLVRKDVY--KLIKGIKEVEGIENVTLTTNG-ILLEGMIDD 106
>gi|219669148|ref|YP_002459583.1| MiaB-like tRNA modifying enzyme YliG [Desulfitobacterium hafniense
DCB-2]
gi|219539408|gb|ACL21147.1| MiaB-like tRNA modifying enzyme YliG [Desulfitobacterium hafniense
DCB-2]
Length = 442
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 71/219 (32%), Gaps = 34/219 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTG 151
+K+ C YC +C + S+ E+ L ++ + EV+
Sbjct: 145 KQYAYVKVAEGCDNYCTYC-----IIPHVRGHFRSRTQESILREVEAMASEGVKEVLLIA 199
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D R L ++K + I+ ++ +R P+ ELI +KE K
Sbjct: 200 QDTTRYGKDRYGEYRLPSLIKEIAGIEGIEWIRL----MYCYPELFTDELITVMKETPKV 255
Query: 207 V-YIAIHANHPY-----EFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
Y+ + H + E + EA I +L + ++ ++ G + E
Sbjct: 256 CRYLDLPLQHAHDKVLAEMNRRGTIREAEGLIHKLRQEIPDIRLRTTMITGFPGETEEEF 315
Query: 256 NLM------RTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
+ F L Y AA ++ E
Sbjct: 316 QAVVDFAKKIRFDRLGAFAYSQEESTPAAQRED-QVPEE 353
>gi|46395073|gb|AAS91670.1| NifN-B [Clostridium beijerinckii]
Length = 896
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 88/237 (37%), Gaps = 32/237 (13%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKSQIWEV 147
H+Y R+ L + C + C +C R+ ++ ++++ EA Y KS++ +
Sbjct: 502 HKYA-RMHLPIAPKCNISCNYCLRKFDCVNESRPGVTTEVLSPEEAFAKYKLVKSKMDNL 560
Query: 148 IFTG----GDPLILSHKRLQKVLKTLRYIKH-----------------VQILRFHSRVPI 186
G GD L + +++ LK +R +++
Sbjct: 561 KVVGIAGPGDAL-ANFDNVRETLKLIREHDSEVTFCLSTNGLMLPFYAQELINLGVSHVT 619
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYE--FSEEAIAAISRLANAGIILLSQSVLL 244
V I+P++ + + + + + + + + I LA+ GI++ V+L
Sbjct: 620 VTMNAIDPKITAKVYKFVDYLGVTYTGEEAAQILLTNQL-SGIKYLADRGIMVKVNIVML 678
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
KGIND + I + G+ + + ++I+ L++K
Sbjct: 679 KGINDHHIEEVTKKAKELGAGITN--IMQMIPVKGSVFENMPLTSNKEIM-DLRKKC 732
>gi|14520330|ref|NP_125805.1| molybdenum cofactor biosynthesis protein A [Pyrococcus abyssi GE5]
gi|18203544|sp|Q9V2G2|MOAA_PYRAB RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|5457545|emb|CAB49036.1| moaA molybdenum cofactor biosynthesis protein [Pyrococcus abyssi
GE5]
Length = 306
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 18/157 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C + C +C R + + ++ E + I + I +V TGG+P I
Sbjct: 17 LTKECNLNCFYCHREGQL--DGERTMKPEEIERIVR-IASRLGIKKVKLTGGEPTIRKD- 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKEAGKPVY-IAIHA 213
+ ++++ +R +V L + + + + L + Y +
Sbjct: 73 -IVEIIRRIR--PYVVDLSLTTNGTTLYTLAEELKEAGLDRVNISLDTLDRKKYKMITGF 129
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + + A + V+++GINDD
Sbjct: 130 DVLDQVIKGIEKATKLFY----PVKLNMVVMRGINDD 162
>gi|323345215|ref|ZP_08085438.1| 2-methylthioadenine synthetase [Prevotella oralis ATCC 33269]
gi|323093329|gb|EFZ35907.1| 2-methylthioadenine synthetase [Prevotella oralis ATCC 33269]
Length = 452
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 17/140 (12%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEK 141
+ R LK+ C +C +C G + ++S + A+A
Sbjct: 150 TFAPSCSRGNRTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTIASLVEQARQAVA----- 204
Query: 142 SQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
E++ TG GD + +++R ++K L ++ V+ R S ++P ++ ELI+
Sbjct: 205 EGGKEIVLTGVNIGDFGVTTNERFIDLVKALDKVEGVKRYRISS----LEPDLLDDELIE 260
Query: 199 CLKEAGKPVYIAIHANHPYE 218
+ H + P +
Sbjct: 261 YCARSR---AFMPHFHIPLQ 277
>gi|297560374|ref|YP_003679348.1| molybdenum cofactor biosynthesis protein A [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296844822|gb|ADH66842.1| molybdenum cofactor biosynthesis protein A [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 335
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 75/213 (35%), Gaps = 31/213 (14%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS- 158
L C + C +C E + K +L+ + + + I EV FTGG+PL+
Sbjct: 17 LTDRCNLRCTYCMPPEGLEWLPKPELLTDDELLRLIRIGVTRLGITEVRFTGGEPLLRRG 76
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
L L H + + R+ P L + V +
Sbjct: 77 LPGLVAGTTALEPRPH---TALTTNGIGL--ARMAPALAEA-GLDRVNVSLDT------- 123
Query: 219 FSEEAIAAISRLANAG--------------IILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ ++R G + +VL++G+NDD +L+R +E
Sbjct: 124 LRPDVFETLARRRRLGDVLDGLAGAARAGLTPVKVNAVLMRGVNDD--DAPDLLRFCIEH 181
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+ ++ L A R T+ ++I+A+L
Sbjct: 182 GYELRFIEQMPLDAQHGWRRDTMITAEEILATL 214
>gi|149193779|ref|ZP_01870877.1| MiaB-like tRNA modifying enzyme [Caminibacter mediatlanticus TB-2]
gi|149135732|gb|EDM24210.1| MiaB-like tRNA modifying enzyme [Caminibacter mediatlanticus TB-2]
Length = 405
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 22/160 (13%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
KEE++ + + +GD + K + + +K+ C C +C ++ G
Sbjct: 96 KEEIDKFLDFKGINLGDFDFVNKKIVESFDKTKAFIKIQEGCDFECAYCIIPKVRG---- 151
Query: 124 TVLSSKDTEA--ALAYIQ--EKSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYI 172
SS+ E L I+ + I E + TG D ++ L K+++ + I
Sbjct: 152 ---SSRSIEESLILEEIKKLRDNGISEFVLTGINMGSYGKD----TNTSLSKLIEKISNI 204
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ V+ +R S P R+ + E + +
Sbjct: 205 RGVKRIRLGSLEPSQIDDRLIELTQNGILEKHLHIALQHT 244
>gi|189347396|ref|YP_001943925.1| Radical SAM domain protein [Chlorobium limicola DSM 245]
gi|189341543|gb|ACD90946.1| Radical SAM domain protein [Chlorobium limicola DSM 245]
Length = 376
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 51/146 (34%), Gaps = 17/146 (11%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
++ + P + + + + C + CR C+ ++ T L + + + E S + V+
Sbjct: 5 LIMKTPRSVDIDITNRCNLRCRHCYY-YSSDAETPTELETAEWLRFFRELNECSVLR-VV 62
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GG+P + ++++ + +RF + + + + L + Y
Sbjct: 63 LAGGEPFMRED--FRELIDGIVK----NRMRFG---ILSNGTLVTDAIASFLAATRRCDY 113
Query: 209 IAIHANHPYEFSEEAIAAISRLANAG 234
+ + RL G
Sbjct: 114 VQV------SIDGSTPGIHDRLRGTG 133
>gi|154150498|ref|YP_001404116.1| radical SAM domain-containing protein [Candidatus Methanoregula
boonei 6A8]
gi|153999050|gb|ABS55473.1| Radical SAM domain protein [Methanoregula boonei 6A8]
Length = 391
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 57/204 (27%), Gaps = 37/204 (18%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ L C + C C+ R S LS+ + A + + + I VIFTGG+PL
Sbjct: 39 VVFWNLTDRCNLSCTHCYSRSAPDSPTQGELSTNEALAFIDDLAA-AGIPLVIFTGGEPL 97
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + L H + + + I E+ +K +G
Sbjct: 98 VRPD------IWQLAG--HCRDKGIKT-ALSTNGTLITDEVAAKIKASGIEYAGI----- 143
Query: 216 PYEFSEEAIAAISRLA-----------------NAGIILLSQSVLLKGINDDPEILANLM 258
A R AG+ + L K + L L
Sbjct: 144 --SLDGATAATHDRFRNTPGAFARATAAFARCKKAGVRCGVRVTLTKENLAELGSLVQLS 201
Query: 259 RTFVELRIKPYYLHHPDLAAGTSH 282
+ + L+ S
Sbjct: 202 QDL---GASRFCLYWLVPCGRGSD 222
>gi|228476133|ref|ZP_04060841.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|314936303|ref|ZP_07843650.1| Fe-S oxidoreductase [Staphylococcus hominis subsp. hominis C80]
gi|228269956|gb|EEK11436.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|313654922|gb|EFS18667.1| Fe-S oxidoreductase [Staphylococcus hominis subsp. hominis C80]
Length = 448
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A +Q E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLVQS--GYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I ++ +R S ++ ++ E+I LK + K
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLEEIDGLERIRISS----IEASQLTDEVIDVLKNSNKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|255036824|ref|YP_003087445.1| molybdenum cofactor biosynthesis protein A [Dyadobacter fermentans
DSM 18053]
gi|254949580|gb|ACT94280.1| molybdenum cofactor biosynthesis protein A [Dyadobacter fermentans
DSM 18053]
Length = 330
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 32/177 (18%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C +C +E + L D A LA + + + ++
Sbjct: 10 GRKHTYLRISL---TDKCNLRCTYCMPQEDMQFMPSKWLMQADEIAYLAGLFVEMGVEKI 66
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+PL+ +++ TL + S + I + I LK AG
Sbjct: 67 RLTGGEPLVRKDA--GEIIATLGKLP-------ASLTLTTNAVHI-DQFIAELKSAG--- 113
Query: 208 YIAIHAN---------HPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
N E + + + I L G ++ V+++G NDD
Sbjct: 114 --VTSLNVSLDTLKEARFREITKRDHFSKTLDHIRLLLAEGFVVKLNMVVMRGTNDD 168
>gi|220907769|ref|YP_002483080.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
7425]
gi|219864380|gb|ACL44719.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
7425]
Length = 495
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 72/229 (31%), Gaps = 35/229 (15%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + L + Q+
Sbjct: 52 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAHKVLVIAGKIPQM 111
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI------------VDPQR 191
+ G GDPL K + +++ + + VD
Sbjct: 112 TVLGIAGPGDPLANPDKTFRTFELIAEKAPDIKLC-LSTNGLMLPEYIDRIKQLNVDHVT 170
Query: 192 INPELIQ---------CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
I ++ ++ K E + ++ L A I+ SV
Sbjct: 171 ITINMVDPEIGAKIYPWIRWKRKRF---TGVEAARILHERQMESLQALKEADILCKVNSV 227
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA-GTSHFRLTIEEG 290
++ GIND+ + + R E + + A +HF LT + G
Sbjct: 228 MIPGINDEHLVEVD--RVIREKGAFLHNIMPLISAPEHGTHFGLTGQRG 274
>gi|154250870|ref|YP_001411694.1| radical SAM domain-containing protein [Parvibaculum lavamentivorans
DS-1]
gi|154154820|gb|ABS62037.1| Radical SAM domain protein [Parvibaculum lavamentivorans DS-1]
Length = 330
Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 5/140 (3%)
Query: 96 RILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGD 153
R L C + C C+ + T +S+ + + + E+ FTGG+
Sbjct: 47 RTLWINTGTLCNIECANCYIHSSPTDDRLTYISAAEAASFFDEAAGFSDALPEIGFTGGE 106
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P + L L V I + + + R+ L+ + G+ + + +
Sbjct: 107 PFMNPD-MLAMTGDALARGHAVLI--LTNAMQPMLRPRVKAGLLALNETYGRQLSLRVSL 163
Query: 214 NHPYEFSEEAIAAISRLANA 233
+H E +A A A
Sbjct: 164 DHYTETLHDAERGAGSFAKA 183
>gi|332285350|ref|YP_004417261.1| molybdenum cofactor biosynthesis protein A [Pusillimonas sp. T7-7]
gi|330429303|gb|AEC20637.1| molybdenum cofactor biosynthesis protein A [Pusillimonas sp. T7-7]
Length = 360
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 8/98 (8%)
Query: 80 DNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEA 133
V R P R L + + C C +C RE+ GS +LS ++
Sbjct: 17 QKWAGDPPADVRRRPLRDLRISVTDRCNFRCTYCMPREVFGSNYQFMPHSALLSFEEITR 76
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSH-KRLQKVLKTLR 170
+A + + + ++ TGG+PL+ + + L +L LR
Sbjct: 77 -IAGVAVQLGVQKIRLTGGEPLLRKNIETLVAMLAQLR 113
>gi|261414630|ref|YP_003248313.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371086|gb|ACX73831.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327444|gb|ADL26645.1| radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 358
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 41/123 (33%), Gaps = 13/123 (10%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPL 155
+ C ++C C + +D A L + V+ TGG+PL
Sbjct: 31 FWECTLRCNLHCLHCGSDC--VKDAIPDMPREDFMAVLDKLTPHIDPKHFIVVITGGEPL 88
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPV-YIAIH 212
+ L++ + ++ + + + + P+R L L+ + +
Sbjct: 89 MRPD--LEECGQEIKK----RGYPWGMVTNGLAMTPERYTRLLNAGLRSLTISLDGLEAS 142
Query: 213 ANH 215
NH
Sbjct: 143 HNH 145
>gi|206900889|ref|YP_002250798.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dictyoglomus thermophilum
H-6-12]
gi|229890516|sp|B5YE40|MIAB_DICT6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|206739992|gb|ACI19050.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dictyoglomus thermophilum
H-6-12]
Length = 440
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 17/116 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI------WEVIFTGGDP 154
+++ C +C +C + G +K ++ + Y+ + + V G D
Sbjct: 151 IIYGCNNFCTYCIVPYLRGREKSR--DPEEIIREVEYLASQGVVEVTLLGQNVDSYGKD- 207
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVY 208
L + L +L + I ++ +RF P+ ++ +LI+ + K P +
Sbjct: 208 --LGNVDLADLLVEIHRIPRIKRIRF----LTSHPRDVSDKLIRVVATHPKVCPHW 257
>gi|172056823|ref|YP_001813283.1| RNA modification protein [Exiguobacterium sibiricum 255-15]
gi|171989344|gb|ACB60266.1| RNA modification enzyme, MiaB family [Exiguobacterium sibiricum
255-15]
Length = 444
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 22/146 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + A + + E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLM-RSRQPEDVLKQAQQLV--DAGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L K+LK L + ++ LR S ++ +I E++ LK++
Sbjct: 199 TGGYGED---LKDYNLAKLLKALESVTGLERLRISS----IEASQITDEVLDVLKDSP-- 249
Query: 207 VYIAIHANHPYEFSEEAIAAISRLAN 232
+ H + P + + R+
Sbjct: 250 -IVVRHLHVP--IQSGSDTVLRRMRR 272
>gi|296269920|ref|YP_003652552.1| molybdenum cofactor biosynthesis protein A [Thermobispora bispora
DSM 43833]
gi|296092707|gb|ADG88659.1| molybdenum cofactor biosynthesis protein A [Thermobispora bispora
DSM 43833]
Length = 329
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 77/202 (38%), Gaps = 17/202 (8%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + K ++L++++ + E+ I EV +TGG+PL+
Sbjct: 17 LTDRCNLRCAYCMPPEGLDWLPKPSILTAEEVIRLVRIGVERLGITEVRYTGGEPLLRRD 76
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC--------LKEAGKPVYIAI 211
L +++ ++ + + + R+ L + L + ++I
Sbjct: 77 --LVEIVAATARLRPRPRISLTTNGIGL--ARLAEPLARAGLDRVNVSLDTLDRELFI-- 130
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H + + A + +VL++G+N+ + L+R +E + ++
Sbjct: 131 RLAHRDRLHDVLDGLTAAAAAGLTPVKVNTVLMRGVNEHEAV--PLLRFCLEHGYELRFV 188
Query: 272 HHPDLAAGTSHFRLTIEEGQKI 293
L A R + +I
Sbjct: 189 EQMPLDAQHGWRREDMVTADEI 210
>gi|111023390|ref|YP_706362.1| molybdenum cofactor biosynthesis protein A [Rhodococcus jostii
RHA1]
gi|123045484|sp|Q0S2N2|MOAA_RHOSR RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|110822920|gb|ABG98204.1| molybdenum cofactor biosynthesis protein MoaA [Rhodococcus jostii
RHA1]
Length = 351
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 7/92 (7%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +L++ + + + + EV FTGG+PL+
Sbjct: 41 ITEKCSLRCTYCMPEEGLPAIPAENLLTANEIVRLVDIAVHRLGVREVRFTGGEPLMRVD 100
Query: 160 --KRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ + + I L + ++
Sbjct: 101 LEQMIAGCAERAPGIP----LAMTTNAVGLEH 128
>gi|257784586|ref|YP_003179803.1| MiaB-like tRNA modifying enzyme YliG [Atopobium parvulum DSM 20469]
gi|257473093|gb|ACV51212.1| MiaB-like tRNA modifying enzyme YliG [Atopobium parvulum DSM 20469]
Length = 468
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 26/157 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+K+ C +C FC + G +++ + + + EVI G D I
Sbjct: 154 AFVKISEGCDRFCAFCAIPYIRGHYHSR--PAEEILQEVKEL-MDGGVREVILIGQDTGI 210
Query: 157 ----LSH------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ L K+++ + + V+ + RV + P+ + ELI +++ +
Sbjct: 211 WGSDMPDTEDGQTPTLAKLMQKVAEV--VRSYKGWIRVLYLQPEGMTDELISTIRDTPEV 268
Query: 207 V-YIAIHANHPYE----------FSEEAIAAISRLAN 232
+ YI I H E +E RL +
Sbjct: 269 LPYIDIPIQHCNERILKRMGRSGSIQELRKLFDRLRS 305
>gi|257062817|ref|YP_003142489.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
gi|256790470|gb|ACV21140.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
Length = 321
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 79/225 (35%), Gaps = 32/225 (14%)
Query: 101 LLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGGDPLILS 158
+ CP C FC + + +D EA LA + E ++ G+PL L
Sbjct: 21 VAKGCPYNKCAFC---DFYKHMTYREIPLEDIEAELARVSNAGGKPERIMLGDGNPLWLP 77
Query: 159 HKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA------- 210
RL+K+++ + + + S ++ + + + L G +
Sbjct: 78 FDRLKKIVEMIEHYLPSCTT--LCSDASVLAIESKTDDELAWLARHGYRMAYVGIESGLD 135
Query: 211 --IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN----DDPEILANLMRTFVEL 264
+ +++A I+RL AGI + + N ++ A L+ +
Sbjct: 136 DVLEFMDKDHLNDQAREQIARLHKAGIDFGAHIITGAAGNGRGIENARATAALINELRPV 195
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEG-------QKIVASLKEKIS 302
I + L+ + L E+G + + ++E +S
Sbjct: 196 HICDFSLYVASVTE----LGLKEEDGEFVRASMLENMREMREFVS 236
>gi|149914618|ref|ZP_01903148.1| arginyl-tRNA-protein transferase [Roseobacter sp. AzwK-3b]
gi|149811411|gb|EDM71246.1| arginyl-tRNA-protein transferase [Roseobacter sp. AzwK-3b]
Length = 317
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 14/155 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGG 152
P+ + +C + C C+ + + +++ + L I E+ I E+ FTGG
Sbjct: 34 PETLWFNTGTLCNITCANCYIESSPTNDRLVYITADEVLDYLDQITERGWPIREIGFTGG 93
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+P ++ + + L V IL R + + L+ K + + I
Sbjct: 94 EPF-MNPEMISMTRACLERGYEVLILTNAMRPM--MRKSVKAGLLDLAKTWRDTLTLRIS 150
Query: 213 ANHPYEFSEE----------AIAAISRLANAGIIL 237
+H E + I + L +AGI +
Sbjct: 151 VDHWSEVRHDEERGKDAFKRTIEGMCWLRDAGIRM 185
>gi|303247563|ref|ZP_07333834.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
gi|302491043|gb|EFL50937.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
Length = 364
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
G Y + + +VC CRFC ++ G+ LS D A LA
Sbjct: 46 AAMEARIARHGKNAYYVHNVHINFTNVCVNACRFCAFFKVKGAAGARTLSVDDIVAELA- 104
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+E + I E+ GG + L + LR I V+
Sbjct: 105 ARENAPIREIHVVGG---LNPDLPLSYYVDMLRAISRVR 140
>gi|257094383|ref|YP_003168024.1| molybdenum cofactor biosynthesis protein A [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046907|gb|ACV36095.1| molybdenum cofactor biosynthesis protein A [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 359
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 66/179 (36%), Gaps = 16/179 (8%)
Query: 85 PLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
P +V ++ + + C C +C EM + VL+ ++
Sbjct: 30 PKGALVDKFGRHVTYIRLSITDRCDFRCSYCMAEEMTFLPRAQVLTLEECLRIAGTF-VD 88
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ +V TGG+PL+ + +L+ + + ++ L + +D R L +
Sbjct: 89 LGVTKVRVTGGEPLVRHNAI--WLLERIAGLSGLKELVITTNGSQLD--RFAAAL-RAAG 143
Query: 202 EAGKPVYIAI-HANHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEI 253
V + + E + + + + AG L +V+++G+NDD I
Sbjct: 144 VRRINVSLDTLRSQRFREITRVGDLAKVLRGLDAAQAAGFERLKLNTVMMRGVNDDELI 202
>gi|291287190|ref|YP_003504006.1| Radical SAM domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290884350|gb|ADD68050.1| Radical SAM domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 355
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 60/217 (27%), Gaps = 40/217 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVL---SSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C + C C + S G S K + + + I + TGG+
Sbjct: 11 MAWEITSKCNLKCVHCRSSSGIHSAVGKFTLEKSKKFIDDLIEF--ANPVI---VLTGGE 65
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ + + + LR + + E+ + + +G +
Sbjct: 66 PLMRED------IFDIASYGTSKGLRMA---MATNGSLVTDEVCEKMLASGIRICSLSLD 116
Query: 214 NHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
E ++ + GI + S K D L ++
Sbjct: 117 GSTPEVHDDFRQQEGSFQAVMDAAALFRKHGIKFIINSSFAKRNQHDIMNTYKLAKSL-- 174
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
A + G++++ L K
Sbjct: 175 -----------QPTAWYMFLIVPTGRGEELMKELISK 200
>gi|194390588|dbj|BAG62053.1| unnamed protein product [Homo sapiens]
Length = 385
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K I ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 158
>gi|147897677|gb|AAI40422.1| Molybdenum cofactor synthesis 1 [synthetic construct]
gi|261857660|dbj|BAI45352.1| molybdenum cofactor synthesis 1 [synthetic construct]
Length = 636
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K I ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 158
>gi|30913216|sp|Q9NZB8|MOCS1_HUMAN RecName: Full=Molybdenum cofactor biosynthesis protein 1; AltName:
Full=Cell migration-inducing gene 11 protein; AltName:
Full=Molybdenum cofactor synthesis-step 1 protein A-B;
Includes: RecName: Full=Molybdenum cofactor biosynthesis
protein A; Includes: RecName: Full=Molybdenum cofactor
biosynthesis protein C
Length = 636
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K I ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 158
>gi|116734668|ref|NP_001068566.1| molybdenum cofactor biosynthesis protein 1 isoform 4 [Homo sapiens]
gi|56204714|emb|CAI20015.1| molybdenum cofactor synthesis 1 [Homo sapiens]
gi|119624405|gb|EAX04000.1| molybdenum cofactor synthesis 1, isoform CRA_c [Homo sapiens]
gi|119624406|gb|EAX04001.1| molybdenum cofactor synthesis 1, isoform CRA_c [Homo sapiens]
Length = 385
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K I ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 158
>gi|22027536|ref|NP_005934.2| molybdenum cofactor biosynthesis protein 1 isoform 1 [Homo sapiens]
gi|3559907|emb|CAA11897.1| MOCS1A protein [Homo sapiens]
gi|14971423|emb|CAC44527.1| MOCS1A enzyme [Homo sapiens]
gi|56204713|emb|CAI20014.1| molybdenum cofactor synthesis 1 [Homo sapiens]
gi|119624407|gb|EAX04002.1| molybdenum cofactor synthesis 1, isoform CRA_d [Homo sapiens]
Length = 385
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K I ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 158
>gi|150019250|ref|YP_001311504.1| thiamine biosynthesis protein ThiH [Clostridium beijerinckii NCIMB
8052]
gi|149905715|gb|ABR36548.1| biotin and thiamin synthesis associated [Clostridium beijerinckii
NCIMB 8052]
Length = 472
Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L E + + + K I R Y +RI++ + C C +C
Sbjct: 49 SHREAAVLLECELEDENEKMYKLAKEIKQRFYGNRIVMFAPLYLSNYCVNGCTYCPYHHK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
L+ ++ + + +Q+ + TG DP+ + + + ++T+ IKH
Sbjct: 109 NKHITRKKLTQEEIKNEVIALQDMGHKRLALETGEDPVNNPLEYVLESIETIYSIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 169 AIRRVNVNIAATTVENYR 186
>gi|284048503|ref|YP_003398842.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
gi|283952724|gb|ADB47527.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
Length = 292
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDP 154
L++ C CRFC +V + L I++ ++ + G DP
Sbjct: 17 CFLQVTSGCSHNKCRFCT---FYKEAPFSVSPESEIREDLQEIRDSGWKVKRIFLQGADP 73
Query: 155 LILSHKRLQKVLKTLRY 171
+LS+ RL++++ ++
Sbjct: 74 FLLSYDRLKRIMDLIKE 90
>gi|2645879|gb|AAB87523.1| molybdenum cofactor biosynthesis protein A [Homo sapiens]
Length = 385
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K I ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 158
>gi|332300583|ref|YP_004442504.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas asaccharolytica DSM 20707]
gi|332177646|gb|AEE13336.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas asaccharolytica DSM 20707]
Length = 157
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C +C C E GT L+ + + I + + +GGDP + S + L
Sbjct: 25 GCSHHCPGCHNPESHNPLVGTPLTEAYLQQIIDDINNNPLLDGITLSGGDP-MFSPEELL 83
Query: 164 KVLKTLRY 171
+LK L+
Sbjct: 84 TLLKRLKS 91
>gi|86742173|ref|YP_482573.1| molybdenum cofactor biosynthesis protein A [Frankia sp. CcI3]
gi|86569035|gb|ABD12844.1| GTP cyclohydrolase subunit MoaA [Frankia sp. CcI3]
Length = 328
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 86/241 (35%), Gaps = 35/241 (14%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + +L+ + + + + EV TGG+P++
Sbjct: 18 LTDRCNLRCTYCMPAEGLAWLPGERMLTDDEVVRLVGVAVGRLGVTEVRLTGGEPMLRP- 76
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L +++ L LR + + I L L+ AG
Sbjct: 77 -GLVELVARLAA------LRPRPELSVTTNGLILARLAGPLRAAGLDRINV----SLDTL 125
Query: 220 SEEAIAAISRLANAG--------------IILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ I+R G + SVL++G+NDD L+R +
Sbjct: 126 DADRFVRITRRERLGDVLAGLSAAAASGFTPVKVNSVLVRGVNDD--EAPRLLRWCLREG 183
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK-----ISGLCQ-PFYILDLPGGYGK 319
+ ++ L A + R T+ +I+A L+ + + G P + ++ GG G+
Sbjct: 184 YELRFIEQMPLDAQHAWRRDTMVTAGEILACLRAEFTLTPLPGRGSAPAELFEVNGGPGR 243
Query: 320 V 320
V
Sbjct: 244 V 244
>gi|323464328|gb|ADX76481.1| conserved hypothetical protein [Staphylococcus pseudintermedius
ED99]
Length = 449
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-KKVIEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L + ++ +R S ++ ++ E+I+ L+++ K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETVDGLERIRISS----IEASQLTDEVIEVLQQSQKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|228993763|ref|ZP_04153668.1| Coenzyme PQQ synthesis protein [Bacillus pseudomycoides DSM 12442]
gi|228765974|gb|EEM14623.1| Coenzyme PQQ synthesis protein [Bacillus pseudomycoides DSM 12442]
Length = 364
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 69/218 (31%), Gaps = 28/218 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C R E + L+ + + + I E +Q ++F+GGD
Sbjct: 7 PFIVIWEVTRACELKCLHC-RAEAQYRRDPRELTFLEGKRLIDEIYEMNQPM-LVFSGGD 64
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPIVDPQRINPELIQCLKEAGKPVYIA 210
PL+ + L + LR S P V I L + A
Sbjct: 65 PLMRED------IYELANYAVQKGLRVSMTPSATPNVTKGAIQKAKGVGLARWAFSIDGA 118
Query: 211 IHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
H + + +AI ++ L I + + + K + E +A L+
Sbjct: 119 TAETHDRFRGVAGSFQLTMDAIQYLNELQ---IPVQINTTISKYNIHEVEEMAALVEKL- 174
Query: 263 ELRIKPYYLHHPDLAAG--TSHFRLTIEEGQKIVASLK 298
+ + +E + L
Sbjct: 175 --GGVLWSVFFLVPIGRGSVEDMISPVEHEL-VFRKLY 209
>gi|325295204|ref|YP_004281718.1| MiaB-like tRNA modifying enzyme [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065652|gb|ADY73659.1| MiaB-like tRNA modifying enzyme [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 437
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 18/134 (13%)
Query: 81 NNHSPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
+ + Y R LK+ C ++C +C + + + S+ E L +
Sbjct: 127 KENQFYPLTIRHYEGKTRAFLKIQQGCELFCSYC-----IIPKARGKMLSEKPEKVLEQV 181
Query: 139 QE--KSQIWEVIFTG----GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+E S E++ TG G L L L K+++ + I + LR S V+P
Sbjct: 182 KELINSGYKEIVLTGTHLGGYGLDLEESLSLAKLIEKIVKIPGLYRLRISS----VEPIE 237
Query: 192 INPELIQCLKEAGK 205
+ ELI+ + + K
Sbjct: 238 FSDELIEVVTSSPK 251
>gi|319892634|ref|YP_004149509.1| MiaB family protein, possibly involved in tRNA or rRNA modification
[Staphylococcus pseudintermedius HKU10-03]
gi|317162330|gb|ADV05873.1| MiaB family protein, possibly involved in tRNA or rRNA modification
[Staphylococcus pseudintermedius HKU10-03]
Length = 449
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-KKVIEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L + ++ +R S ++ ++ E+I+ L+++ K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETVDGLERIRISS----IEASQLTDEVIEVLQQSQKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|290961474|ref|YP_003492656.1| molybdenum cofactor biosynthesis protein A [Streptomyces scabiei
87.22]
gi|260651000|emb|CBG74118.1| molybdenum cofactor biosynthesis protein A [Streptomyces scabiei
87.22]
Length = 329
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 77/208 (37%), Gaps = 15/208 (7%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + K +LS + + I EV FTGG+PL+
Sbjct: 17 LTDRCNLRCTYCMPEEGLQWLAKPDLLSDDEIVRLIDIAVRTLGITEVRFTGGEPLLRP- 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHS------RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L +++ + + + + R + L V+ +
Sbjct: 76 -GLVGIVERVAALAPRPQMSLTTNGIGLKRTATALKAAGLDRVNVSLDTLRPDVFKTLTR 134
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+ ++ + + +AG+ + SVL+ G+ND+ +L+ VE + ++
Sbjct: 135 ---RDRHKDVLEGLEAARDAGLTPVKVNSVLMPGLNDN--EAPDLLAWAVEHDYELRFIE 189
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L A R + I+ASL+ +
Sbjct: 190 QMPLDAQHGWKRDGMVTAGDILASLRTR 217
>gi|237751915|ref|ZP_04582395.1| molybdenum cofactor biosynthesis protein a [Helicobacter
winghamensis ATCC BAA-430]
gi|229376674|gb|EEO26765.1| molybdenum cofactor biosynthesis protein a [Helicobacter
winghamensis ATCC BAA-430]
Length = 332
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 76/210 (36%), Gaps = 32/210 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLILS 158
+ C C +C L E+ L +I+ + ++ TGG+PL+ S
Sbjct: 17 VTERCNFRCAYCMPNT-PMDIGDESLDVP-LESVLNFIKVATSEGVKKIRITGGEPLLRS 74
Query: 159 HKRLQKVLKTLRYI-KHVQILRFHSRVPIVDP----------QRINPELIQCLKEAGKPV 207
++ + + + I H+ I + ++ P +RIN L LK+
Sbjct: 75 --KIVEFIANICKIAPHIDI-ALTTNAFLLAPIAQDLKNAGLKRINISL-DSLKKENIKC 130
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+ ++ + I AG+ + V L+GIND EI+ L + L +
Sbjct: 131 I------SKRDGLDKILLGIQAAQKAGLKIKLNMVPLRGINDC-EIVEILEYA-IGLGVM 182
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
Y+ + + G K+V L
Sbjct: 183 VRYIEFMENTHAK-----SEIRGLKLVEIL 207
>gi|73972793|ref|XP_538905.2| PREDICTED: similar to Molybdenum cofactor biosynthesis protein 1 B
(MOCS1B) (Molybdenum cofactor synthesis-step 1 protein
A-B) (Molybdenum cofactor biosynthesis protein C) [Canis
familiaris]
Length = 634
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 16/129 (12%)
Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
RQF+ +E D G H Y L C + C++C E
Sbjct: 46 RRQFL--REHAVPFSAFLTDSFGR---------QHSYLRISL---TEKCNLRCQYCMPEE 91
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
V L + + LA + K + ++ TGG+PLI ++ L ++ ++
Sbjct: 92 GVPLTPKADLLTTEEILTLARLFVKEGVDKIRLTGGEPLIRPDVV--DIVAQLHQLEGLR 149
Query: 177 ILRFHSRVP 185
+ +
Sbjct: 150 TIGITTNGI 158
>gi|118578746|ref|YP_899996.1| molybdenum cofactor biosynthesis protein A [Pelobacter propionicus
DSM 2379]
gi|118501456|gb|ABK97938.1| GTP cyclohydrolase subunit MoaA [Pelobacter propionicus DSM 2379]
Length = 326
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 16/131 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C V + + S + +A K I ++ TGG+PL+
Sbjct: 18 ITDRCNMRCFYCMPSVGVVDKGHKSVLSYEELLLIAETAVKLGIEKIRITGGEPLV---- 73
Query: 161 RLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
R+ L+ L I +Q L + ++ E+ L AG
Sbjct: 74 RIGVVGFLERLAAIPGLQHLAVTTNGLLL------EEMASDLYRAGVQRLNV----SLDS 123
Query: 219 FSEEAIAAISR 229
+ E I+R
Sbjct: 124 LNPETFGKITR 134
>gi|331699402|ref|YP_004335641.1| molybdenum cofactor biosynthesis protein A [Pseudonocardia
dioxanivorans CB1190]
gi|326954091|gb|AEA27788.1| molybdenum cofactor biosynthesis protein A [Pseudonocardia
dioxanivorans CB1190]
Length = 390
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 79/205 (38%), Gaps = 15/205 (7%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + + L+ ++ + + E+ FTGG+PL+
Sbjct: 79 LTDRCNLRCHYCMPAEGLDWMPREEQLTDEELLRLITIAVRDLGVEELRFTGGEPLLR-- 136
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLKEAGKPVYIAIHA 213
K L++++ ++ + + L L + +I
Sbjct: 137 KGLEELVAASAALRPRPDISLTTNGVGLARRAEALAAAGVNRLNVSLDTLRPDRFASITR 196
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+ ++ +A + +AG+ + +VLL+G+NDD + +L+R V + ++
Sbjct: 197 ---RDRFDDVVAGMRAARDAGLSPVKINTVLLRGMNDDEAV--DLLRFAVAEGFELRFIE 251
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASL 297
L A R + +I+ +L
Sbjct: 252 QMPLDAQHGWERSEMVTAGEIMQAL 276
>gi|115488710|ref|NP_001066842.1| Os12g0507000 [Oryza sativa Japonica Group]
gi|108862721|gb|ABA98687.2| Molybdenum cofactor biosynthesis protein 1 A, putative, expressed
[Oryza sativa Japonica Group]
gi|113649349|dbj|BAF29861.1| Os12g0507000 [Oryza sativa Japonica Group]
gi|125536763|gb|EAY83251.1| hypothetical protein OsI_38457 [Oryza sativa Indica Group]
gi|215694512|dbj|BAG89505.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + + L C + C++C E V + +LS + + S + ++ T
Sbjct: 81 RFHNYLRISLTERCNLRCQYCMPAEGVELTPSSELLSHDEIIRVAD-LFVTSGVDKIRLT 139
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+P I ++ + L +K ++ L + ++
Sbjct: 140 GGEPTIRKD--IEDICLHLSGLKGLKTLAMTTNGLVLSK 176
>gi|108862722|gb|ABA98688.2| Molybdenum cofactor biosynthesis protein 1 A, putative, expressed
[Oryza sativa Japonica Group]
Length = 293
Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + + L C + C++C E V + +LS + + S + ++ T
Sbjct: 81 RFHNYLRISLTERCNLRCQYCMPAEGVELTPSSELLSHDEIIRVAD-LFVTSGVDKIRLT 139
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+P I ++ + L +K ++ L + ++
Sbjct: 140 GGEPTIRKD--IEDICLHLSGLKGLKTLAMTTNGLVLSK 176
>gi|218884694|ref|YP_002429076.1| Predicted Fe-S oxidoreductase [Desulfurococcus kamchatkensis 1221n]
gi|218766310|gb|ACL11709.1| Predicted Fe-S oxidoreductase [Desulfurococcus kamchatkensis 1221n]
Length = 572
Score = 41.4 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 83/282 (29%), Gaps = 50/282 (17%)
Query: 56 IARQFIPQKEELNILPEEREDPIGD--NNHSPLKGIVHRYPDR----------------- 96
I R P+ E+ L D +G H Y
Sbjct: 63 IRR-ICPEHGEIEELYYGDVDFYKRVVKYTEDGRGARHIYTQVKTLCPFNCGLCPMHKQH 121
Query: 97 ---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + + + C + C +CF + I+++ + TGG+
Sbjct: 122 TALVNMVVTNRCNLSCWYCFFYSEASGYV-YEPRLDQIREMVRSIKKQGVTVAIQLTGGE 180
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP-----ELIQCLKEAGKPVY 208
PL+ L ++K L+ + V+ ++ ++ I E + L+ +G
Sbjct: 181 PLLRED--LVDIVKLLKE-EGVRHIQLNTNGIRFAELYIEDPVKAVEYARELRSSG---- 233
Query: 209 IAIHANHPYEFSE--------EAIAAISRLANAGIILLSQSV-LLKGINDD-----PEIL 254
+ + E + AG+ ++KG+N
Sbjct: 234 VNTVYLSFDGVTPVTNWKNHWEVPYILETFRKAGMTSTVLVPTVIKGVNTHELGAIVRFA 293
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
A M + +P L +R+TI E K++
Sbjct: 294 AKHMDVIRAVNFQPVSLTGYMKKHEREKYRITIPEVVKLIEE 335
>gi|116749748|ref|YP_846435.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116698812|gb|ABK18000.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 360
Score = 41.4 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 80/210 (38%), Gaps = 25/210 (11%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+P + +L C + C C G + LS+ + A + + EV FTGG
Sbjct: 10 FPLILGWELTLECNLRCGHC--GAAAGIPRQRELSTDEALALCDQL-PHLLVQEVDFTGG 66
Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA- 210
+PL+ L K L+ +R + + +R L++ G V I
Sbjct: 67 EPLLRPDWPLLAKRLR-----DQDITVRVVTNG-TLLNER-TIGLLKETGVEGVGVSIDG 119
Query: 211 IHANHP-----YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ A H + +A++ R AG+ L +V+ + LA +M + +
Sbjct: 120 LGATHDAIRGRKGLYDGVMASVERTVAAGLPL---TVITGVHPCNLHELAEMMYELLAVG 176
Query: 266 IKPYYLH----HPDLAAGTSHFRLTIEEGQ 291
++ + L +G+ FRLT E G
Sbjct: 177 VRNWRLQPILPLGRAVSGSIRFRLT-ERGY 205
>gi|326791643|ref|YP_004309464.1| radical SAM protein [Clostridium lentocellum DSM 5427]
gi|326542407|gb|ADZ84266.1| Radical SAM domain protein [Clostridium lentocellum DSM 5427]
Length = 449
Score = 41.0 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQK 122
EEL L EE D + + ++R P + L + H C + C++CF E
Sbjct: 61 EELMSLKEEGMLYTADQYETLVPAFLNREPVVKALCLHVAHDCNLKCKYCFAGEGEYHGH 120
Query: 123 GTVLSSKDTEAALAYI---QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQI 177
+++S + + A+ +I + + E+ F GG+PL ++ + +++ + R + +
Sbjct: 121 RSLMSIEVGKKAVDFIIENSKHRKNIEIDFFGGEPL-MNWEMVKETVAYAREREKETGKN 179
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
RF + +N E+I L E V +
Sbjct: 180 FRFT---MTTNGVLLNDEIIDYLNENMHNVVL 208
>gi|282162697|ref|YP_003355082.1| hypothetical protein MCP_0027 [Methanocella paludicola SANAE]
gi|282155011|dbj|BAI60099.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 440
Score = 41.0 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 72/226 (31%), Gaps = 35/226 (15%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLILSHK 160
CP C +C G + L ++ + I+ I V T +
Sbjct: 194 SGCPYRCAYCNVTTAFGGE----LRPRNVGDVVEEIKALKAQGIRIVTLTDA-CFNVPSG 248
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG----------KPVYIA 210
++VL + I + ++ + + EL++ K AG +
Sbjct: 249 YAKEVLNAI--IDSGVRVYLNT-TFVPVAGHFDDELMELFKRAGGIYASLGAETFSRKML 305
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY- 269
+ P+ + +A L I + Q+ L G +D L + LR PY
Sbjct: 306 KSYHKPFTLD-DVLACAGLLGRHHIPFMVQA-LFGGPGEDAST---LRESLDMLRHVPYA 360
Query: 270 ---YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
Y L GT F +EG SGL +P + +
Sbjct: 361 EFTYTMGIRLLPGTLLFETAKKEGLA------GDASGLFRPRFYIS 400
>gi|300310058|ref|YP_003774150.1| tRNA modifying 2-methylthioadenine synthetase [Herbaspirillum
seropedicae SmR1]
gi|300072843|gb|ADJ62242.1| tRNA modifying 2-methylthioadenine synthetase protein
[Herbaspirillum seropedicae SmR1]
Length = 446
Score = 41.0 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 25/186 (13%), Positives = 59/186 (31%), Gaps = 27/186 (14%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
+ ++ C YC +C V S+ E L + + E++ G +
Sbjct: 148 TAYVSIMEGCSKYCSYC-----VVPYTRGEEVSRRFEDVLTEVAGLADQGVKEIMLLGQN 202
Query: 154 P----LILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
++ + ++ + + ++ +RF + P QR+ + +
Sbjct: 203 VNAYRGVMEDGEIADFALLIEYIAELPGIERIRFVTSHPKEFSQRLIDTYAKV-PKLCNH 261
Query: 207 VYIAIHANHPYEFSEEA----------IAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+Y+ H + + A + I R+ + QS + G + E
Sbjct: 262 LYLPAQ--HGSDRTLAAMKRGYTALEYKSVIRRMRKVRPDITVQSDFIVGFPGETEEDFE 319
Query: 257 LMRTFV 262
+ V
Sbjct: 320 ALMKLV 325
>gi|224367738|ref|YP_002601901.1| hypothetical protein HRM2_06230 [Desulfobacterium autotrophicum
HRM2]
gi|223690454|gb|ACN13737.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 471
Score = 41.0 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 69/188 (36%), Gaps = 23/188 (12%)
Query: 99 LKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + ++C C +C ++ L EA Y+ I V F+GG+P L
Sbjct: 81 LFVNNLCNASCFYCPSAQKHRSIPGTGNLEFNAPEAYADYVSA-FDIKGVSFSGGEP-TL 138
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGK-PVYIAIHA 213
S R+ + LKTLR H R + + I I + ++ L++ G + I
Sbjct: 139 SFDRVVRFLKTLR---H----RSGNSLYIWMYTNGILITEDKLKILRDEGLDEIRFDIG- 190
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
+ ++ A I+ +V + + +D E L ++R + + LH
Sbjct: 191 --------AVRYNLEKVRMAVGIIPRVTVEIPAVPEDVETLKRVVRDLDAMGVNFLNLHQ 242
Query: 274 PDLAAGTS 281
Sbjct: 243 LRCTGFNR 250
>gi|116754452|ref|YP_843570.1| molybdenum cofactor biosynthesis protein A [Methanosaeta
thermophila PT]
gi|116665903|gb|ABK14930.1| GTP cyclohydrolase subunit MoaA [Methanosaeta thermophila PT]
Length = 298
Score = 41.0 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 9/92 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C G G +S + + + I V TGG+PL+ S
Sbjct: 18 VTSRCNLRCIYC---HHEGEVTGGEISREMAVNVVN-AASRLGIRSVKITGGEPLMRSD- 72
Query: 161 RLQKVLKTLRYI-KHVQILRFHSRVPIVDPQR 191
L++++ + + V+I + + R
Sbjct: 73 -LEEMIAGFKEVAPGVEI-SITTNG-VYLKDR 101
>gi|220917205|ref|YP_002492509.1| lipoic acid synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955059|gb|ACL65443.1| lipoic acid synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 326
Score = 41.0 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 62/191 (32%), Gaps = 28/191 (14%)
Query: 98 LLKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
++ + VC CRFC + + L+ E AL YI S + + GG
Sbjct: 86 VMLMGDVCTRGCRFCNVKTAAHPPALDPDEPRHLAEAIAELALDYIVVTSVDRDDLPDGG 145
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
++ L+ I + + + R +PE ++ + A V+
Sbjct: 146 ------AAHFADAIRRLKEIPGLLV------EVLTPDFRGDPEAVRTVGRAAPDVFANN- 192
Query: 213 ANHPYEFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ +++L ++++S ++ G+ + + MR
Sbjct: 193 LETVRRLTPAVRDAKATYDQTLGVLAQLKREFPQVVTKSSIMVGLGEQEAEVVEAMRDLR 252
Query: 263 ELRIKPYYLHH 273
++ L
Sbjct: 253 AHGVEILTLGQ 263
>gi|145321187|gb|ABP63662.1| molybdenum cofactor biosynthesis protein A [Achromobacter sp. SY8]
Length = 364
Score = 41.0 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGGDP 154
++ C C +C RE+ G+ + +L+ + E A A+I+ + ++ +GG+P
Sbjct: 44 VIDQCNFRCTYCMPREVFGADYPFLRRDELLTFDELERTARAFIR--LGVRKIRLSGGEP 101
Query: 155 LILSHKRLQKVLKTLRYI 172
L+ L+ ++ L +
Sbjct: 102 LLRKD--LEHLVAQLARL 117
>gi|226950381|ref|YP_002805472.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
Kyoto]
gi|226843573|gb|ACO86239.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
Kyoto]
Length = 432
Score = 41.0 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 19/134 (14%)
Query: 93 YPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
Y D R LK+ C +C +C G+ + + + + E+I +
Sbjct: 138 YRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKP--EKIMEEVEKLSKH-GFKEIILS 194
Query: 151 GGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--- 202
G D L +L+ + ++ ++ +R S P E I + +
Sbjct: 195 GIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGSIDPTF----FTEEEIIRISKLKR 250
Query: 203 --AGKPVYIAIHAN 214
+ + N
Sbjct: 251 FCPHFHLSLQSGCN 264
>gi|148380907|ref|YP_001255448.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
ATCC 3502]
gi|153931336|ref|YP_001385215.1| RNA modification protein [Clostridium botulinum A str. ATCC 19397]
gi|153937595|ref|YP_001388684.1| RNA modification protein [Clostridium botulinum A str. Hall]
gi|148290391|emb|CAL84518.1| putative radical SAM superfamily protein [Clostridium botulinum A
str. ATCC 3502]
gi|152927380|gb|ABS32880.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
ATCC 19397]
gi|152933509|gb|ABS39008.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
Hall]
Length = 432
Score = 41.0 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 19/134 (14%)
Query: 93 YPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
Y D R LK+ C +C +C G+ + + + + E+I +
Sbjct: 138 YRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKP--EKIMEEVEKLSKH-GFKEIILS 194
Query: 151 GGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--- 202
G D L +L+ + ++ ++ +R S P E I + +
Sbjct: 195 GIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGSIDPTF----FTEEEIIRISKLKR 250
Query: 203 --AGKPVYIAIHAN 214
+ + N
Sbjct: 251 FCPHFHLSLQSGCN 264
>gi|329907318|ref|ZP_08274630.1| Molybdenum cofactor biosynthesis protein A [Oxalobacteraceae
bacterium IMCC9480]
gi|327547006|gb|EGF31898.1| Molybdenum cofactor biosynthesis protein A [Oxalobacteraceae
bacterium IMCC9480]
Length = 371
Score = 41.0 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ + +LS ++ I I ++ TGG+PL
Sbjct: 46 VTDRCNFRCVYCMPKELFDKDYQFLPQTALLSFEEITRMAR-IFIDHGIEKIRLTGGEPL 104
Query: 156 ILSHKRLQKVLKTLRYIK 173
+ K L+K+++ L +K
Sbjct: 105 LR--KHLEKLIEMLSRLK 120
>gi|325969734|ref|YP_004245926.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
gi|323708937|gb|ADY02424.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 296
Score = 41.0 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 94/281 (33%), Gaps = 52/281 (18%)
Query: 96 RILLKLLHVCPVYCRFCFRRE-------MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ +L + +CP+ C +C M + + D L +
Sbjct: 17 KSVLFITGICPLNCFYCPVSRDRFGKDVMFINDRPVSKFPDDIIDELDRAGSNG----LA 72
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGGDP+++ + ++ L L + + H +++ IN + I+ L +G
Sbjct: 73 ITGGDPIMVVDRVVE--LVRLLKDTYGRDFHIHMYTHVLN---INEDAIKKLAGSGIDEV 127
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR-IK 267
N P + S + + L +AGI L + L +D +A L + I
Sbjct: 128 RIHAVN-PAQLSGKL-GLLKMLKDAGIELGLEVPALPRFENDIVKVAEL---LINNGLIS 182
Query: 268 PYYLHHPDLAAGTSHFRL--------------TIEEGQKIVASLKEKISGLCQ---PFYI 310
++ D++ + + +I+ G KI ++ + +
Sbjct: 183 FVNINELDVSPANINNLISMGYKPGPDGSVIGSIDAGIKIATEIRRRWPWISVNVCTSRY 242
Query: 311 LDLP-------------GGYGKVKIDTHNIKKVGNGSYCIT 338
DL G +V +D ++ G G I
Sbjct: 243 KDLAQIGARLFRINMRVSGGDEVVLDDGTVESRGEGGVVIK 283
>gi|302337760|ref|YP_003802966.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
gi|301634945|gb|ADK80372.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 506
Score = 41.0 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 78/220 (35%), Gaps = 24/220 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P +++ C ++C C+ +K L+ ++ ++ L ++ I+ V+ +GG+
Sbjct: 124 PGTLVISPTMRCNLHCTGCYSGLY---EKAGDLNEEEIDSILDQARK-LGIYFVVVSGGE 179
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P +L L+ K + F + R + L + + +A
Sbjct: 180 PYVLKDMWLRLFRKY-------SDMYFLTFTNGTFIDRETARALGKLGNVAPAISVEGYA 232
Query: 214 NHPYE-----FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
E + + A+ L G++ + SV N D ++ +++
Sbjct: 233 AETDERRGKGVHAKVLNAMHNLREEGVLFGT-SVTYTSKNIDTITSDEFVKYYIDQGAIF 291
Query: 269 YYLHHPDLAA--GTSHFRLTIEE----GQKIVASLKEKIS 302
+ + E+ G++I A L++++
Sbjct: 292 SWFFMFMPVGKDPILDLVPSPEQRLMTGRRI-ADLRKRLP 330
>gi|307354426|ref|YP_003895477.1| Radical SAM domain-containing protein [Methanoplanus petrolearius
DSM 11571]
gi|307157659|gb|ADN37039.1| Radical SAM domain protein [Methanoplanus petrolearius DSM 11571]
Length = 387
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 14/136 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FT 150
+ P ++L CP CR+C+ +S + +A++++ F
Sbjct: 2 KTPFHVMLIPTLGCPSRCRYCWSS----DVNSPRMSIDTIKDVVAWMKDLKDNQVTFTFH 57
Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GG+PL+ ++ L L + H+ + + + + PE+ L E PV
Sbjct: 58 GGEPLLAGADFYREALPLLAEGLPHLDPAFAIQTNLWL-----MTPEIADVLAEYNIPV- 111
Query: 209 IAIHANHPYEFSEEAI 224
+ P E ++
Sbjct: 112 -GSSIDGPKEINDLQR 126
>gi|161484628|ref|NP_064426.2| molybdenum cofactor biosynthesis protein 1 isoform 1 [Mus musculus]
gi|226707540|sp|Q5RKZ7|MOCS1_MOUSE RecName: Full=Molybdenum cofactor biosynthesis protein 1; Includes:
RecName: Full=Molybdenum cofactor biosynthesis protein
A; Includes: RecName: Full=Molybdenum cofactor
biosynthesis protein C
Length = 636
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 22/143 (15%)
Query: 49 PHNPNDP------IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
P P+ P + QF+ +E P + G H Y L
Sbjct: 32 PGEPSRPTREGLSLRLQFL----------QEHAAPFS-AFLTDSFGRQHSYLRISL---T 77
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C + C++C E V L + + LA + K + ++ TGG+PLI
Sbjct: 78 EKCNLRCQYCMPEEGVPLTPKADLLTTEEILTLARLFVKEGVDKIRLTGGEPLIRPDVV- 136
Query: 163 QKVLKTLRYIKHVQILRFHSRVP 185
++ L ++ ++ + +
Sbjct: 137 -DIVARLHGLEGLRTIGLTTNGI 158
>gi|158521236|ref|YP_001529106.1| radical SAM domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158510062|gb|ABW67029.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
Length = 358
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 37/222 (16%), Positives = 67/222 (30%), Gaps = 31/222 (13%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
P + KG R + + C + CR C G G + +
Sbjct: 1 MSHPSHPAHTGQDKGAQLR---LVAWETTRNCNLSCRHCRASATCGPYAGELDTEHSL-Q 56
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L I + + +I TGG+PL+ + L LR V + I
Sbjct: 57 LLDQIAQVGKPI-IILTGGEPLLRPDIFEIATHGTKLG-------LRM---VMAPNGTLI 105
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI----------SRL-ANAGIILLSQS 241
E + + E+G I+I + + S +A + +RL AGI +
Sbjct: 106 TEETARRMAESGIQ-RISISIDGADKQSHDAFRGVEGAFEGALRGARLAKKAGIDFQINT 164
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
+ + D + L + +++
Sbjct: 165 TVTQVNMDQVPQILELAE---SIGAVAHHIFLLVPTGRGKDM 203
>gi|126462640|ref|YP_001043754.1| molybdenum cofactor biosynthesis protein A [Rhodobacter sphaeroides
ATCC 17029]
gi|126104304|gb|ABN76982.1| molybdenum cofactor biosynthesis protein A [Rhodobacter sphaeroides
ATCC 17029]
Length = 355
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 34/241 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS-H 159
+ C C +C M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 41 VTDRCDFRCTYCMAEHMTFLPKAELLTLEELDRLCSAFVRM-GVQKLRVTGGEPLVRRGI 99
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHPYE 218
+ + ++ L + + R EL C V + A +
Sbjct: 100 MTFFRAMSRHLGTGALKELTLTTNGSQL--ARHADELAAC-GVRRVNVSLDTLDAERFAK 156
Query: 219 FS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
+ + + + AG+ + +V L+G N+D L R + + L
Sbjct: 157 VTRWGRLPQVLDGLRAARAAGLRVKINTVALRGFNED-----ELFRLVDWCGAEGHDLTF 211
Query: 274 --------------PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
D + R + E ++ L E+ G Y+ L K
Sbjct: 212 IEVMPMGEMGEDTRLDQYWPLTELRTRLAERFSLIE-LSERTGGPA--RYVR-LAETGQK 267
Query: 320 V 320
+
Sbjct: 268 I 268
>gi|323694864|ref|ZP_08109017.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14673]
gi|323501090|gb|EGB16999.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14673]
Length = 486
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 60/170 (35%), Gaps = 22/170 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157
+ CP +C +C + + K + S ++ YI + ++ EV+ D
Sbjct: 213 IFTGRGCPAHCNYCVYPQTLHGHKYRLRSPENVVEEFEYIAKNFPEVHEVVIED-DTFTA 271
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL--IQCLKEAGKPVYIAIHANH 215
+ +R+ K+ + L + R+ + R+N +L +Q +K AG + I
Sbjct: 272 NKERVIKICELLEE------KKLTKRLKWLCNARVNIDLKTMQAMKRAGCHL-IIPGFES 324
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
E + + S L+ ++ + ++ +
Sbjct: 325 YNE------QILKNIKK-----GSNLKLIDAYVENAKKAGLMIHACYMVG 363
>gi|313112838|ref|ZP_07798485.1| MiaB-like tRNA modifying enzyme YliG [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310624908|gb|EFQ08216.1| MiaB-like tRNA modifying enzyme YliG [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 441
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 65/199 (32%), Gaps = 33/199 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
LK+ C C +C + G ++ EA ++ + E+I DP
Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGPLHSRDMADCVAEA--RWLAG-EGVKELIVVAQDPTA 202
Query: 157 LSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
+ ++L L + ++ +R P+RI E I +K K V Y+
Sbjct: 203 YGEDWGKPGSICELLDKLNKVPGLEWIRI----MYAYPERITDEFIAAMKRNEKVVPYLD 258
Query: 211 IHANHPYEF----------SEEAIAAISRLANA--GIILLSQSVLLKGI-NDDPEILANL 257
+ H + E + I +L GI L + L+ G + E +L
Sbjct: 259 LPIQHCNDTILKNMNRRSNRAELLEVIGKLRREIPGITLR--TTLIAGFPGETEEQFEDL 316
Query: 258 MR-----TFVELRIKPYYL 271
F L Y
Sbjct: 317 CNFVKEVKFDRLGCFAYSA 335
>gi|262372689|ref|ZP_06065968.1| molybdenum cofactor biosynthesis protein A [Acinetobacter junii
SH205]
gi|262312714|gb|EEY93799.1| molybdenum cofactor biosynthesis protein A [Acinetobacter junii
SH205]
Length = 345
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 77/246 (31%), Gaps = 28/246 (11%)
Query: 79 GDNNHSPLKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
+ + L + +Y ++ + + C C +C +K +LS +
Sbjct: 6 HEIPETNLPILQDQYGRIKRKLRISVTDRCNFKCVYCMPEHPEWMKKQDLLSFESLLVFC 65
Query: 136 AYIQEKSQIWEVIFTGGDPLIL-SHKRLQKVLKTLRYIKHVQILRFHSRVPIV------D 188
Y+ + I + TGG+PL+ + L+ L+ I ++ + + +
Sbjct: 66 TYMVK-QGIENIRITGGEPLMRQGVVHFIRDLQQLKKIG-LKRISMTTNGHYLAKYADQL 123
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
+L L + A+ E + + I A I VL+K N
Sbjct: 124 KAAGLDDLNISLDSLDAKQFKALT---KKELNP-VLEGIKAAQKAEIPFKINCVLVKAHN 179
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAG-TSHFRLTIEEGQKIVASLKEKISGLCQP 307
DD + + ++ D T ++ E +P
Sbjct: 180 DDQILQMVRWAKDQNIPLRFIEFMPLDGDQHWTKDAVVSEAEILA-----------RLKP 228
Query: 308 FYILDL 313
Y ++L
Sbjct: 229 HYAIEL 234
>gi|224826786|ref|ZP_03699886.1| coenzyme PQQ biosynthesis protein E [Lutiella nitroferrum 2002]
gi|224601006|gb|EEG07189.1| coenzyme PQQ biosynthesis protein E [Lutiella nitroferrum 2002]
Length = 381
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 28/232 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
L + CP+ C +C LS+++ + LA +E + + FTGG+PL
Sbjct: 23 LTYRCPLKCSWCNNPLDFDKYTEHELSTEEWKRVLAEARELGALQ-LGFTGGEPLQRPDL 81
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRV--PIVDPQRINPELIQCLKEAGKPVY--IAIHANH 215
+ L L + ++ Q ++ L+ + + H
Sbjct: 82 EELVAYADELGFYTNLITSGVGLNEARMAALKQAGLKQVQLSLQATRAALTDQLVGTRAH 141
Query: 216 PYEFSEEAIAAISRLANA-GIILLSQSVLLKGINDDPEILANLMRTFVELRIKP------ 268
+ +RL A G ++ + + + +++ ++ EL ++
Sbjct: 142 ARKL------EAARLIKAYGFPMVLNMPVFRH---NIDLIDEMVAWAAELGVEYIEFANI 192
Query: 269 -YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG-----LCQPFYILDLP 314
YY R I+ + ++ +E++ G P Y D P
Sbjct: 193 QYYNWALLNRDELMPTREQIQRAEAVIQRWRERLDGAMTIYFVIPDYFEDRP 244
>gi|224024976|ref|ZP_03643342.1| hypothetical protein BACCOPRO_01707 [Bacteroides coprophilus DSM
18228]
gi|224018212|gb|EEF76210.1| hypothetical protein BACCOPRO_01707 [Bacteroides coprophilus DSM
18228]
Length = 474
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 46/129 (35%), Gaps = 8/129 (6%)
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVL 126
E + + + Y +RI++ + C C +C + L
Sbjct: 60 ECEDPQLLEEIYALAREIKQRFYGNRIVMFAPLYLSNYCVNSCTYCPYHIKNKTIARKKL 119
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHS 182
+ ++ + +Q+ + G DPL + + + ++T+ IKH ++ + +
Sbjct: 120 TQEEIRREVIALQDMGHKRLALEAGEDPLHNPIEYILESIQTIYSIKHKNGAIRRVNVNI 179
Query: 183 RVPIVDPQR 191
V+ R
Sbjct: 180 AATTVENYR 188
>gi|269798345|ref|YP_003312245.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula DSM
2008]
gi|269094974|gb|ACZ24965.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula DSM
2008]
Length = 321
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C E+ + +LS + L + V TGG+PL+
Sbjct: 16 LTDACNFCCPYCRPAEITPQSQTQLLSVDEWMKILGAFH-HIGVKAVRLTGGEPLLYP-- 72
Query: 161 RLQKVLKTLRY 171
++++L ++
Sbjct: 73 HIEELLSRIKE 83
>gi|261419008|ref|YP_003252690.1| radical SAM protein [Geobacillus sp. Y412MC61]
gi|319765824|ref|YP_004131325.1| radical SAM protein [Geobacillus sp. Y412MC52]
gi|261375465|gb|ACX78208.1| Radical SAM domain protein [Geobacillus sp. Y412MC61]
gi|317110690|gb|ADU93182.1| Radical SAM domain protein [Geobacillus sp. Y412MC52]
Length = 372
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 60/176 (34%), Gaps = 16/176 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPIVDPQRINPELIQCLKEAGKPV--- 207
PL+ + L + LR S P V + I L +
Sbjct: 66 PLMRPD------VYDLAKYAIDKGLRVSMTPSATPNVTKEAIRKAKEVGLSRWAFSLDGP 119
Query: 208 --YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H + I AI L I + +V+ + +A L+
Sbjct: 120 NAEIHDHFRGVSGSFDLTIRAIQYLHELDIPVQINTVISRYNVHVLNEMAALVEKL 175
>gi|170756026|ref|YP_001782588.1| RNA modification protein [Clostridium botulinum B1 str. Okra]
gi|169121238|gb|ACA45074.1| RNA modification enzyme, MiaB family [Clostridium botulinum B1 str.
Okra]
Length = 432
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 19/134 (14%)
Query: 93 YPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
Y D R LK+ C +C +C G+ + + + + E+I +
Sbjct: 138 YRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKP--EKIMEEVEKLSKH-GFKEIILS 194
Query: 151 GGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--- 202
G D L +L+ + ++ ++ +R S P E I + +
Sbjct: 195 GIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGSIDPTF----FTEEEIIRISKLKR 250
Query: 203 --AGKPVYIAIHAN 214
+ + N
Sbjct: 251 FCPHFHLSLQSGCN 264
>gi|153939005|ref|YP_001392232.1| RNA modification protein [Clostridium botulinum F str. Langeland]
gi|152934901|gb|ABS40399.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
Langeland]
gi|295320230|gb|ADG00608.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
230613]
Length = 432
Score = 41.0 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 19/134 (14%)
Query: 93 YPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
Y D R LK+ C +C +C G+ + + + + E+I +
Sbjct: 138 YRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKP--EKIMEEVEKLSKH-GFKEIILS 194
Query: 151 GGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--- 202
G D L +L+ + ++ ++ +R S P E I + +
Sbjct: 195 GIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGSIDPTF----FTEEEIIRISKLKR 250
Query: 203 --AGKPVYIAIHAN 214
+ + N
Sbjct: 251 FCPHFHLSLQSGCN 264
>gi|296188253|ref|ZP_06856645.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
gi|296047379|gb|EFG86821.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
Length = 262
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+I ++ +TGG+PLIL + + ++ I+ ++ + + ++ +L LKE
Sbjct: 2 EIKKIRYTGGEPLILKN--ISSLISETSKIQQIKDIAITTNGILLY------DLADELKE 53
Query: 203 AGKPVYIAIHANHPYE-----FS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
AG + I + E + + + AI + + GI + +VL+KGINDD
Sbjct: 54 AGLK-RVNISLDTLKEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDD 110
>gi|264680203|ref|YP_003280113.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Comamonas testosteroni
CNB-2]
gi|299533989|ref|ZP_07047341.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Comamonas
testosteroni S44]
gi|262210719|gb|ACY34817.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Comamonas testosteroni
CNB-2]
gi|298717898|gb|EFI58903.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Comamonas
testosteroni S44]
Length = 442
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 93/283 (32%), Gaps = 48/283 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG----- 151
+ ++ C YC +C G + +D +A + E + E+ G
Sbjct: 147 AFVSIMEGCSKYCSYCVVPYTRGEEVSRPF--EDVLVEVAGLAE-QGVKEITLLGQNVNA 203
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
GD ++ L +L+ + I ++ +R+ + P P LI+ + +
Sbjct: 204 YLGKMGDSSEMADFAL--LLEYVAEIPGIERIRYTTS----HPNEFTPRLIEAYAKIPQ- 256
Query: 207 VYIAIHANHPYE-------------FSE-EAIAAISRLANAGIILLSQSVLLKGI-NDDP 251
+ H + P + ++ E + I +L L S + G +
Sbjct: 257 --LVSHLHLPVQHGSDKILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETE 314
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTS----HFRLTIEEGQKIVASLKEKISGLCQP 307
E +M+ ++R + GT H E + + L+ I+
Sbjct: 315 EDFQKMMKLIHDVRFDNSFSFIFSPRPGTPAANLHDDTPHEVKLRRLQELQAVIN----- 369
Query: 308 FYILDLPGG-YGKV-KIDTHNIKKVGNGSYCITDHHNIVHDYP 348
I ++ G V ++ + K + N V ++P
Sbjct: 370 TNIKEISEERVGTVQRLLVEGVSKRDGSELMGRTYCNRVVNFP 412
>gi|258654860|ref|YP_003204016.1| molybdenum cofactor biosynthesis protein A [Nakamurella
multipartita DSM 44233]
gi|258558085|gb|ACV81027.1| molybdenum cofactor biosynthesis protein A [Nakamurella
multipartita DSM 44233]
Length = 356
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 85 PLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQE 140
++ R+ R + L C + C +C E + +LS + +A E
Sbjct: 26 QSPLLIDRHGRRARDLRVSLTDRCNLRCTYCMPAEGLNWQPADELLSDDELVRVIALAVE 85
Query: 141 KSQIWEVIFTGGDPLILS-HKRLQKVLKTLRYIKHV 175
I E+ FTGG+PL+ +L + LR +
Sbjct: 86 HLGIEEIRFTGGEPLLRRGLPQLIARVADLRPRPEI 121
>gi|222874685|gb|EEF11816.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 17/122 (13%)
Query: 60 FIPQKEELNIL-----PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
IP +E P + P GD + + + + + C C +C
Sbjct: 5 VIPLVDERAPTRPAAVPSLLQTPTGDLQDRLGRSL-----RDLRISITDRCNFRCSYCMP 59
Query: 115 REMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH-KRLQKVLKT 168
+E+ G++LS ++ + + ++ TGG+PL+ + + L + L
Sbjct: 60 KEVFDKNYSYLPHGSLLSFEEITRTARLFVQH-GVQKIRLTGGEPLLRKNVETLVEQLSA 118
Query: 169 LR 170
LR
Sbjct: 119 LR 120
>gi|153009561|ref|YP_001370776.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum anthropi
ATCC 49188]
gi|151561449|gb|ABS14947.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum anthropi
ATCC 49188]
Length = 345
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 19/161 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYIQEKSQIWEVIFTGGDPLILSH 159
+ C C +C M K +L+ ++ + A+I + ++ TGG+PL+ +
Sbjct: 32 VTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCTAFI--DKGVRKLRLTGGEPLVRKN 89
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQC-LKEAGKPV-YIAIHAN 214
+ +++ L H++ + R EL +C ++ + +
Sbjct: 90 --IMHLIRQLSR--HLKSGALDELTLTTNGSQLSRFADELAECGIRRINVSLDTLDPEKF 145
Query: 215 HPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + + + I AGI + +V LK ND
Sbjct: 146 H--QITRWGDLPRVLEGIEAAQRAGIRVKINAVALKDFNDH 184
>gi|257440231|ref|ZP_05615986.1| RNA modification enzyme, MiaB family [Faecalibacterium prausnitzii
A2-165]
gi|257197265|gb|EEU95549.1| RNA modification enzyme, MiaB family [Faecalibacterium prausnitzii
A2-165]
Length = 441
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 65/201 (32%), Gaps = 37/201 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154
LK+ C C +C + G L S+D +A + + E+I DP
Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGP-----LHSRDLADCVAEARWLAGEGVKELIVVAQDP 200
Query: 155 LILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-Y 208
+ ++L L + ++ +R P+RI + I +K K V Y
Sbjct: 201 TAYGEDWGKPGSICELLDKLNKVPGLEWIRI----MYAYPERITDDFIAAMKRNEKVVPY 256
Query: 209 IAIHANHP----------YEFSEEAIAAISRLANA--GIILLSQSVLLKGI-NDDPEILA 255
+ + H E + I +L GI L + L+ G + E
Sbjct: 257 LDLPIQHCNDTILKNMNRRSTRAELLEVIGKLRREIPGITLR--TTLIAGFPGETEEQFE 314
Query: 256 NLMR-----TFVELRIKPYYL 271
+L F L Y
Sbjct: 315 DLCNFVKEVRFDRLGCFAYSA 335
>gi|104780794|ref|YP_607292.1| molybdenum cofactor biosynthesis protein A [Pseudomonas entomophila
L48]
gi|95109781|emb|CAK14486.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
entomophila L48]
Length = 322
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C L++ +AY+ E + I + TGG+PLI
Sbjct: 17 LTAACNYACTYCVPDGKRLVAAQDELTADALARGVAYLVEAAGIERLRITGGEPLISP-- 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
RL+ LK + + ++ + +
Sbjct: 75 RLEAFLKAVAGLG-LEDISLTTNG 97
>gi|332558679|ref|ZP_08413001.1| molybdenum cofactor biosynthesis protein A [Rhodobacter sphaeroides
WS8N]
gi|332276391|gb|EGJ21706.1| molybdenum cofactor biosynthesis protein A [Rhodobacter sphaeroides
WS8N]
Length = 341
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 77/241 (31%), Gaps = 34/241 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS-H 159
+ C C +C M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 27 VTDRCDFRCTYCMAEHMTFLPKAELLTLEELDRLCSAFVRM-GVQKLRVTGGEPLVRRGI 85
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHPYE 218
+ + ++ L + + R EL C V + A+ +
Sbjct: 86 MTFFRAMSRHLGTGALKELTLTTNGSQL--ARHADELAAC-GVRRVNVSLDTLDADRFAK 142
Query: 219 FS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
+ + + + AG+ + +V L+G N+D L R + + L
Sbjct: 143 VTRWGRLPQVLDGLRAARAAGLRVKINTVALRGFNED-----ELFRLVDWCGAEGHDLTF 197
Query: 274 --------------PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
D + R + E ++ L E+ G Y+ L K
Sbjct: 198 IEVMPMGEMGEDTRLDQYWPLTELRTRLAERFSLIE-LSERTGGPA--RYVR-LAETGQK 253
Query: 320 V 320
+
Sbjct: 254 I 254
>gi|118602689|ref|YP_903904.1| GTP cyclohydrolase subunit MoaA [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|118567628|gb|ABL02433.1| GTP cyclohydrolase subunit MoaA [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 331
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 82/217 (37%), Gaps = 20/217 (9%)
Query: 101 LLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS- 158
+ C C +C E ++ +LS +D E + + I +V TGG+PL+
Sbjct: 19 VTEHCNYRCFYCRDDEHKPNCKRKDILSYEDIEKIVQLFAQ-LGITKVRLTGGEPLLRRG 77
Query: 159 HKRLQKVLKTLRYIKHV-------QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
++ K++ + I V + +F ++ R+N + + + + +
Sbjct: 78 ISKIAKLVSRIDGIDDVPLSTNAHLLEKFAKKLYQNGINRVNISIDSLIPKRFEEI---- 133
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H + + + + + V ++G+NDD + +++ V I ++
Sbjct: 134 --THGGDLIQVTKGIDAAIQTGMAPIKINVVTMRGVNDD--EIESMIDFVVSKGIDIRFI 189
Query: 272 -HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
P +G I E + I A + + ++ P
Sbjct: 190 ETMPIGLSGIKALTQHISE-KNIFAKINKHLNNQLTP 225
>gi|29832997|ref|NP_827631.1| molybdenum cofactor biosynthesis protein A [Streptomyces
avermitilis MA-4680]
gi|29610118|dbj|BAC74166.1| putative molybdenum cofactor biosynthesis protein A [Streptomyces
avermitilis MA-4680]
Length = 343
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 75/206 (36%), Gaps = 11/206 (5%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS- 158
L C + C +C E + K +L+ + + + I EV FTGG+PL+
Sbjct: 31 LTDRCNLRCTYCMPEEGLQWLAKPDLLTDDEIVRLIDIAVTRLGITEVRFTGGEPLLRPG 90
Query: 159 HKRLQKVLKTLRYIKH--VQILRFH-SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + + L + SR + L V+ +
Sbjct: 91 LVGIVERVAALASRPQTSLTTNGIGLSRTATALKAAGLDRVNVSLDTLRPDVFKTLTR-- 148
Query: 216 PYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
+ ++ IA + +AG+ + +VL+ G+N D +L+ V + ++
Sbjct: 149 -RDRHKDVIAGLEAARDAGLTPVKVNTVLMPGLNAD--EAPDLLAWAVAHDYELRFIEQM 205
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEK 300
L A R + I+ASL+ +
Sbjct: 206 PLDAQHGWKREGMVTAGDILASLRTR 231
>gi|288920384|ref|ZP_06414694.1| molybdenum cofactor biosynthesis protein A [Frankia sp. EUN1f]
gi|288348191|gb|EFC82458.1| molybdenum cofactor biosynthesis protein A [Frankia sp. EUN1f]
Length = 328
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 74/215 (34%), Gaps = 25/215 (11%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS- 158
L C + C +C E + VL+ + + + + E+ TGG+P +
Sbjct: 18 LTDRCNLRCAYCMPAEGLDWLPSAEVLTDDEVLRLVGIAVTRLGVTEIRLTGGEPTLRPG 77
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
RL + + L + + R+ V +++ H
Sbjct: 78 LVRLVERMSALSPRPEIS---LTTNGL-----RLGGLAADLAAAGLDRVNVSLDTLHSDR 129
Query: 219 FSEEAIAAISRLANAGI-----------ILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
F+ RL + + +VL++G+NDD A+L+R + L +
Sbjct: 130 FARMTRR--DRLDDVLAGLAAAAEAGLTPVKVNAVLVRGLNDDE--AADLLRWSLRLGYE 185
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
++ L A R + +I+ L+ + S
Sbjct: 186 LRFIEQMPLDAQHGWRRTEMVTAGEIMELLRAEFS 220
>gi|291532427|emb|CBL05540.1| Radical SAM superfamily [Megamonas hypermegale ART12/1]
Length = 130
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 14/106 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C ++C C+R G + L++++ + L I + + +IF+GG+PL+
Sbjct: 3 ISWNTTNACNMFCDHCYRDA--GCKADEELNTQEAKTLLEQIAK-AGFKIMIFSGGEPLM 59
Query: 157 LSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
L + L F + + I E+ LK
Sbjct: 60 RPDIVELVEYATKLG-----LRSVFGTNGTL-----ITEEMALKLK 95
>gi|288818491|ref|YP_003432839.1| molybdenum cofactor biosynthesis protein A [Hydrogenobacter
thermophilus TK-6]
gi|288787891|dbj|BAI69638.1| molybdenum cofactor biosynthesis protein A [Hydrogenobacter
thermophilus TK-6]
gi|308752081|gb|ADO45564.1| molybdenum cofactor biosynthesis protein A [Hydrogenobacter
thermophilus TK-6]
Length = 334
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C C+FC + +L+ ++ E + + K + +V TGG+PL+
Sbjct: 17 VTDRCNFRCQFCMPENQDYEFYSRSEILTFEEIERIVR-VSTKLGVRKVRITGGEPLVR- 74
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVP 185
K ++ ++ L ++ + + +
Sbjct: 75 -KHIENLIHLLSHVDGLHDISMTTNGF 100
>gi|291535169|emb|CBL08281.1| MiaB-like tRNA modifying enzyme [Roseburia intestinalis M50/1]
Length = 435
Score = 41.0 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 23/128 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ E L I+ KS EV+ TG
Sbjct: 143 HTRAFIKVQDGCNQFCSYC-----IIPFARGRVRSRKMEDVLNEIKGLAKSGYKEVVLTG 197
Query: 152 GDPLILSH------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ LS + L +++ + I+ ++ +R S ++P+ + + + L E K
Sbjct: 198 ---IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK 250
Query: 206 PVYIAIHA 213
I H
Sbjct: 251 ---ICPHF 255
>gi|325275801|ref|ZP_08141670.1| molybdenum cofactor synthesis domain-containing protein
[Pseudomonas sp. TJI-51]
gi|324099072|gb|EGB97049.1| molybdenum cofactor synthesis domain-containing protein
[Pseudomonas sp. TJI-51]
Length = 322
Score = 41.0 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C LS+ +AY+ E + I + TGG+PL+
Sbjct: 17 LTAACNYACTYCVPDGKRLVAAQDELSADALARGVAYLIEAAGIERLRITGGEPLVSP-- 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
RL L + + ++ + +
Sbjct: 75 RLDAFLAAVAKLG-LEDISLTTNG 97
>gi|20094416|ref|NP_614263.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19]
gi|19887500|gb|AAM02193.1| Predicted Fe-S oxidoreductase [Methanopyrus kandleri AV19]
Length = 403
Score = 41.0 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ R P+ + + + CP C C + T LS++D A+ + V
Sbjct: 85 LGRRVPEAVTMAVTQRCPCNCVHCSADRR----RPTELSTEDWHRAIRE-ALDLGTYNVT 139
Query: 149 FTGGDPLILSH-KRLQKVLKTLRYI 172
FTGGDPL L + + R I
Sbjct: 140 FTGGDPLFREDLPELIQAVDDDRAI 164
>gi|73951561|ref|XP_863490.1| PREDICTED: similar to lipoic acid synthetase isoform 1 precursor
isoform 2 [Canis familiaris]
Length = 353
Score = 41.0 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 56/197 (28%), Gaps = 25/197 (12%)
Query: 98 LLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGG 152
++ + C CRFC R ++K L Y V+ T
Sbjct: 130 IMLMGDTCTRGCRFCSVKTARNPPPLDASEPYNTAKAIAEWGLDY---------VVLTSV 180
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
D + + KTLR +K ++ + PEL + +++ ++
Sbjct: 181 DRDDMPDGGAEHFAKTLRDLKAIEKVALSGLDVYAHNIETVPELQRKVRDPRANFSQSLR 240
Query: 213 -ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H E + ++ I+L L + + L V+ Y+
Sbjct: 241 VLKHAKEVRPDV------ISKTSIMLG----LGENDEQVYATMKALREADVDCLTLGQYM 290
Query: 272 HHPDLAAGTSHFRLTIE 288
+ +
Sbjct: 291 QPTKRHLKVEEYITPEK 307
>gi|269957895|ref|YP_003327684.1| Radical SAM domain-containing protein [Xylanimonas cellulosilytica
DSM 15894]
gi|269306576|gb|ACZ32126.1| Radical SAM domain protein [Xylanimonas cellulosilytica DSM 15894]
Length = 376
Score = 41.0 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEV 147
R P + +L C + CR C R E V L+++ A L IQ V
Sbjct: 24 YQRSPMIVYWELTTACGLACRHC-RAEAVRQPLPGELTTRQALAVLDQIQGFGDPLPH-V 81
Query: 148 IFTGGDPLILSHKRL 162
+ TGGDPL + L
Sbjct: 82 VMTGGDPLRRADLDL 96
>gi|240145918|ref|ZP_04744519.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
L1-82]
gi|257201983|gb|EEV00268.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
L1-82]
Length = 435
Score = 41.0 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 23/128 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ E L I+ KS EV+ TG
Sbjct: 143 HTRAFIKVQDGCNQFCSYC-----IIPFARGRVRSRKMEDVLNEIKGLAKSGYKEVVLTG 197
Query: 152 GDPLILSH------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ LS + L +++ + I+ ++ +R S ++P+ + + + L E K
Sbjct: 198 ---IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK 250
Query: 206 PVYIAIHA 213
I H
Sbjct: 251 ---ICPHF 255
>gi|313891888|ref|ZP_07825490.1| six-Cys-in-45 modification radical SAM protein [Dialister
microaerophilus UPII 345-E]
gi|313119663|gb|EFR42853.1| six-Cys-in-45 modification radical SAM protein [Dialister
microaerophilus UPII 345-E]
Length = 477
Score = 41.0 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLIL 157
+ H C + C++CF + + ++S A+ ++ S EV F GG+PL +
Sbjct: 103 IAHDCNLRCKYCFAGQGGYGKWRMLMSFDVARRAIDFLIAHSGPRKHCEVDFFGGEPL-M 161
Query: 158 SHKRLQKVLKTLR--YIKHVQILR--FHSRVPIVDPQRI 192
+ +Q+ + +R KH +I+R S ++D +++
Sbjct: 162 NWHVIQQTVTYIRQKERKHNKIVRLSLTSNGMLLDKEKV 200
>gi|109898477|ref|YP_661732.1| molybdenum cofactor biosynthesis protein A [Pseudoalteromonas
atlantica T6c]
gi|109700758|gb|ABG40678.1| GTP cyclohydrolase subunit MoaA [Pseudoalteromonas atlantica T6c]
Length = 322
Score = 41.0 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 53/203 (26%), Gaps = 12/203 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C LS + + ++ TGG+P +
Sbjct: 17 ITDVCNFSCEYCLPDGYQCDTDRDFLSLIEITRIAGAFAK-LGTSKIRITGGEPSLRKD- 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-----YIAIHANH 215
L ++ ++ + + P I+ + L + + +
Sbjct: 75 -LPDAIRACANTPGIKQVAITTNG-YKLPDHIDSWVEAGLTQMNVSIDSLDPRMFASITG 132
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
+ I R G+ + +VL++ N + ++ L
Sbjct: 133 HDKLDVILR-GIDRAVELGVTVKVNAVLMRHFNQHELSAFLKWIKTTPITLRFIELMQTG 191
Query: 276 LAAGTSHFRLTIEEGQKIVASLK 298
F G I L
Sbjct: 192 D--NQLFFDKNHASGLPIKEQLI 212
>gi|330810983|ref|YP_004355445.1| molybdenum cofactor biosynthesis protein A [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327379091|gb|AEA70441.1| molybdenum cofactor biosynthesis protein A [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 322
Score = 41.0 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + C C +C LS++ +AY+ E + I + T
Sbjct: 8 RRFRNLRISL-TSACNYACTYCVPDGKRLVAAQDELSAEAMARGVAYLIEAAGIERLRIT 66
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
GG+PL+ +L++ + + + ++ + +
Sbjct: 67 GGEPLVSP--KLERFMTAVGQMG-LEDISLTTNG 97
>gi|298291280|ref|YP_003693219.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
506]
gi|296927791|gb|ADH88600.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
506]
Length = 348
Score = 41.0 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 57/159 (35%), Gaps = 15/159 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C M K +L+ ++ + + + + ++ TGG+PL+
Sbjct: 35 VTDRCDFRCVYCMAEHMTFLPKPELLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRRDV 93
Query: 161 R-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L + L ++ L + + R EL K + +++ P F
Sbjct: 94 MTLFRSLSRHLDSGALEELTLTTNGSQL--ARFASELAD---CGVKRINVSLDTLDPQRF 148
Query: 220 SEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
A I AGI + +V L+G N+D
Sbjct: 149 RALTRWGDLNKVLAGIDAAQEAGIHVKLNAVALRGENED 187
>gi|296156158|ref|ZP_06838997.1| nitrogenase cofactor biosynthesis protein NifB [Burkholderia sp.
Ch1-1]
gi|295893664|gb|EFG73443.1| nitrogenase cofactor biosynthesis protein NifB [Burkholderia sp.
Ch1-1]
Length = 531
Score = 41.0 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 31/248 (12%)
Query: 71 PEEREDPIGDN-NHSPLKGIV-HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQK 122
P++ I + + P H + R+ + + C + C +C R+ G
Sbjct: 54 PDDMPAEIWEKVKNHPCYSEEAHHHYARMHVAVAPACNIQCNYCNRKYDCSNESRPGVVS 113
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + +A E Q+ + G GD L K + +++
Sbjct: 114 QKLTPEQAVKKVVAVASEIPQMTVLGIAGPGDSLASPKKTFETFRMLQEQAPDIKLC-LS 172
Query: 182 SRVPI------------VDPQRINPELIQ------CLKEAGKPVYIAIHANHPYEFSEEA 223
+ +D I ++ E
Sbjct: 173 TNGLALPDLVDEICKYNIDHVTITINMVDPAVGAKIYPWIFWEHKRVTGYEAARILHERQ 232
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA-GTSH 282
+ + L G++ SVL+ GIND+ R + + + +H
Sbjct: 233 MKGLEMLTARGVLTKINSVLIPGINDEHLYEV--NREVKKRGAFLHNIMPLISEPEHGTH 290
Query: 283 FRLTIEEG 290
F L+ + G
Sbjct: 291 FGLSGQRG 298
>gi|168334360|ref|ZP_02692544.1| molybdopterin cofactor biosynthesis protein A, putative
[Epulopiscium sp. 'N.t. morphotype B']
Length = 299
Score = 41.0 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ + C + C +C + + L+ + E I I +V TGG+PLI S
Sbjct: 1 MTNRCNLKCIYCVGADKF---EAKYLTIDEIERVAN-IFATLGITKVKLTGGEPLIRSD- 55
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
L ++K LR V++ + +++ +
Sbjct: 56 -LANIVKRLRSAGMVEVT-LTTNGLLLEQKLTT 86
>gi|262277765|ref|ZP_06055558.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
HIMB114]
gi|262224868|gb|EEY75327.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
HIMB114]
Length = 435
Score = 41.0 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 13/112 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD-- 153
+ + C +C+FC V S+D L I + E++ G +
Sbjct: 152 FVTIQEGCDKFCKFC-----VVPYTRGPEFSRDHNKILDEILSLTDNGTKEIVLLGQNVS 206
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L +++K + I +V+ +RF + P + ELI E K
Sbjct: 207 AYKNNDISLARLIKKIAKINNVKRIRFTTS----HPNDFDQELISLFGEEPK 254
>gi|238019507|ref|ZP_04599933.1| hypothetical protein VEIDISOL_01376 [Veillonella dispar ATCC 17748]
gi|237864206|gb|EEP65496.1| hypothetical protein VEIDISOL_01376 [Veillonella dispar ATCC 17748]
Length = 380
Score = 41.0 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 66/187 (35%), Gaps = 31/187 (16%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDP 154
CP C FC + + G + L+ + + Y+ + + WEV F GG
Sbjct: 9 FFIPHVGCPYVCTFCNQSRITGQSGISHLTPDYIKKTITDYVGKKRNDKFWEVAFYGG-S 67
Query: 155 LILSHKRLQKVL----KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP---- 206
H+ LQ L + + +R +R P + + I L+ G
Sbjct: 68 FTAIHRDLQHTLLEPAYEMLQQDIIDGIRCSTR-----PDAVGDKAITLLQSYGVKTVEL 122
Query: 207 --------VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANL 257
+ + H + E + A++RL G+ + Q LL G+ + E +
Sbjct: 123 GVQSMNDGILVDAKRGHTAQ---EVVDAVARLKQRGMTVGVQ--LLPGLKGETWETILET 177
Query: 258 MRTFVEL 264
V+L
Sbjct: 178 AIAVVKL 184
>gi|161484622|ref|NP_082740.1| molybdenum cofactor biosynthesis protein 1 isoform 2 [Mus musculus]
gi|148691686|gb|EDL23633.1| molybdenum cofactor synthesis 1, isoform CRA_c [Mus musculus]
Length = 385
Score = 41.0 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 22/143 (15%)
Query: 49 PHNPNDP------IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
P P+ P + QF+ +E P + G H Y L
Sbjct: 32 PGEPSRPTREGLSLRLQFL----------QEHAAPFS-AFLTDSFGRQHSYLRISL---T 77
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C + C++C E V L + + LA + K + ++ TGG+PLI
Sbjct: 78 EKCNLRCQYCMPEEGVPLTPKADLLTTEEILTLARLFVKEGVDKIRLTGGEPLIRPDVV- 136
Query: 163 QKVLKTLRYIKHVQILRFHSRVP 185
++ L ++ ++ + +
Sbjct: 137 -DIVARLHGLEGLRTIGLTTNGI 158
>gi|138894319|ref|YP_001124772.1| coenzyme PQQ synthesis protein PqqE [Geobacillus
thermodenitrificans NG80-2]
gi|134265832|gb|ABO66027.1| Coenzyme PQQ synthesis protein PqqE [Geobacillus
thermodenitrificans NG80-2]
Length = 372
Score = 41.0 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 60/176 (34%), Gaps = 16/176 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I + + ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYDMDEPM-LVFTGGD 65
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPIVDPQRINPELIQCLKEAGKPV--- 207
PL+ + L + LR S P V + I L +
Sbjct: 66 PLMRPD------VYDLAKYAIDKGLRVSMTPSATPNVTKEAIRKAKEVGLARWAFSLDGP 119
Query: 208 --YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H + I AI L I + +V+ + + + L+
Sbjct: 120 NAEIHDHFRGTSGSFDLTIRAIQYLHELDIPVQINTVISRYNVHVLDEMVELVEKL 175
>gi|91778660|ref|YP_553868.1| nitrogenase cofactor biosynthesis protein NifB [Burkholderia
xenovorans LB400]
gi|91691320|gb|ABE34518.1| Nitrogenase cofactor biosynthesis protein NifB [Burkholderia
xenovorans LB400]
Length = 531
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 31/248 (12%)
Query: 71 PEEREDPIGDN-NHSPLKGIV-HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQK 122
P++ I + + P H + R+ + + C + C +C R+ G
Sbjct: 54 PDDMPAEIWEKVKNHPCYSEEAHHHYARMHVAVAPACNIQCNYCNRKYDCSNESRPGVVS 113
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + +A E Q+ + G GD L K + +++
Sbjct: 114 QKLTPEQAVKKVVAVASEIPQMTVLGIAGPGDSLASPKKTFETFRMLQEQAPDIKLC-LS 172
Query: 182 SRVPI------------VDPQRINPELIQ------CLKEAGKPVYIAIHANHPYEFSEEA 223
+ +D I ++ E
Sbjct: 173 TNGLALPDLVDEICKYNIDHVTITINMVDPAVGAKIYPWIFWEHKRVTGYEAARILHERQ 232
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA-GTSH 282
+ + L G++ SVL+ GIND+ R + + + +H
Sbjct: 233 MKGLEMLTARGVLTKINSVLIPGINDEHLYEV--NREVKKRGAFLHNIMPLISEPEHGTH 290
Query: 283 FRLTIEEG 290
F L+ + G
Sbjct: 291 FGLSGQRG 298
>gi|329121946|ref|ZP_08250559.1| radical SAM domain protein [Dialister micraerophilus DSM 19965]
gi|327467392|gb|EGF12891.1| radical SAM domain protein [Dialister micraerophilus DSM 19965]
Length = 477
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLIL 157
+ H C + C++CF + + ++S A+ ++ S EV F GG+PL +
Sbjct: 103 IAHDCNLRCKYCFAGQGGYGKWRMLMSFDVARRAIDFLIAHSGPRKHCEVDFFGGEPL-M 161
Query: 158 SHKRLQKVLKTLR--YIKHVQILR--FHSRVPIVDPQRI 192
+ +Q+ + +R KH +I+R S ++D +++
Sbjct: 162 NWHVIQQTVTYIRQKERKHNKIVRLSLTSNGMLLDKEKV 200
>gi|298290897|ref|YP_003692836.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
506]
gi|296927408|gb|ADH88217.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
506]
Length = 348
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 57/159 (35%), Gaps = 15/159 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C M K +L+ ++ + + + + ++ TGG+PL+
Sbjct: 35 VTDRCDFRCVYCMAEHMTFLPKPELLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRRDV 93
Query: 161 R-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L + L ++ L + + R EL K + +++ P F
Sbjct: 94 MTLFRSLSRHLDSGALEELTLTTNGSQL--ARFASELAD---CGVKRINVSLDTLDPQRF 148
Query: 220 SEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
A I AGI + +V L+G N+D
Sbjct: 149 RALTRWGDLSKVLAGIDAAQAAGIHVKLNAVALRGENED 187
>gi|51892757|ref|YP_075448.1| heme biosynthesis protein [Symbiobacterium thermophilum IAM 14863]
gi|51856446|dbj|BAD40604.1| heme biosynthesis protein [Symbiobacterium thermophilum IAM 14863]
Length = 355
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 61/220 (27%), Gaps = 26/220 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P R++ +L C + CR C G LS+ + I ++ V TGG+
Sbjct: 13 PRRVVWELTRACNLTCRHCRTVTCPAP-TGKDLSTDQVVRVIEDIASVARPTFVF-TGGE 70
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-- 210
PL + H ++ + + I E L+ G
Sbjct: 71 PLKRPDLFTIAAHASR-----HGAVVVLETNATM-----ITAEAAAFLRTCGVAAVHVAL 120
Query: 211 --IHANHPYEF------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
A EF A I+ L G+ + + D + L
Sbjct: 121 DGATAETHDEFRGIPGAWAAAWRGIAHLKAVGLPFHLKFTIGVHNRDQVPAMLRLAEQEG 180
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
+ +L A + + +L +S
Sbjct: 181 AAGV---HLCARMPAGCGIRLERDERLSPEEMEALLGWLS 217
>gi|317484667|ref|ZP_07943568.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
gi|316924023|gb|EFV45208.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
Length = 397
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 65/206 (31%), Gaps = 24/206 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I ++ C + C+ C G LS+++ +A + +IFTGGDP+I
Sbjct: 53 IAWEVTRSCNLACKHCRAEAHPEPYPGE-LSTEEAKALIDTFPSVGNPI-IIFTGGDPMI 110
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--HAN 214
+ L + LR V + I PE + +KEAG N
Sbjct: 111 RPD------VYELIAYAGSKGLRC---VMSPNGTLITPENARKIKEAGVQRCSISIDGYN 161
Query: 215 HPYE--------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ + I L G+ + + + D + + L +
Sbjct: 162 AEKHDAFRCVPGAFDATMRGIECLKAEGVEFQINTTVTRDNLHDFKKIFELCE---RIGA 218
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQK 292
+++ + + Q+
Sbjct: 219 AAWHIFLLVPMGRAAELADQVITAQE 244
>gi|288918578|ref|ZP_06412927.1| radical SAM domain-containing protein [Frankia sp. EUN1f]
gi|288349978|gb|EFC84206.1| radical SAM domain-containing protein [Frankia sp. EUN1f]
Length = 286
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 60/191 (31%), Gaps = 19/191 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSH 159
L C C +C + + E +++E+ V+FT G+ L S
Sbjct: 10 PLASCDYDCSYCPFAKRRDTAAQLRADRAALERFTRWVREQKHGVSVLFTPWGEGLTRSW 69
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
R + L L ++ HV+ + + R++ + ++ HP +
Sbjct: 70 YR--RALVELSHLPHVERVAIQTN----LSHRVD--WTSEADLSRLALW---GTYHPSQV 118
Query: 220 SEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF---VELRIKPYYLHHPD 275
E + LA G+ S + G + + +L V L + H
Sbjct: 119 PYERFVGRCLDLAARGVRF---SAGIVGQPEHLDAARSLRADLPRHVYLWVNAASGHTYT 175
Query: 276 LAAGTSHFRLT 286
R+
Sbjct: 176 DTEAAHWTRID 186
>gi|56204712|emb|CAI20013.1| molybdenum cofactor synthesis 1 [Homo sapiens]
Length = 448
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C +C E V L + + LA + K I ++
Sbjct: 6 GRQHSYLRISL---TEKCNLRCEYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKI 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 63 RLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 98
>gi|99034401|ref|ZP_01314414.1| hypothetical protein Wendoof_01000782 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225630069|ref|YP_002726860.1| MiaB-like tRNA modifying enzyme [Wolbachia sp. wRi]
gi|225592050|gb|ACN95069.1| MiaB-like tRNA modifying enzyme [Wolbachia sp. wRi]
Length = 408
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 31/160 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +++ + C C FC E G+ + + + I+ ++ EV+FTG
Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVP-----INSIIEQIRIFVENGYQEVVFTG 177
Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--- 202
D +L L +++ L+ I ++ LR S +D ++ EL+ +
Sbjct: 178 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRLSS----IDVAEVDDELMDLIANESR 233
Query: 203 --AGKPVYIAIHAN---------HPYEFSEEAIAAISRLA 231
+ + N H E E + L
Sbjct: 234 LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 273
>gi|42520370|ref|NP_966285.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410108|gb|AAS14219.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 408
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 31/160 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +++ + C C FC E G+ + + + I+ ++ EV+FTG
Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVP-----INSIIEQIRIFVENGYQEVVFTG 177
Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--- 202
D +L L +++ L+ I ++ LR S +D ++ EL+ +
Sbjct: 178 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRLSS----IDVAEVDDELMDLIANESR 233
Query: 203 --AGKPVYIAIHAN---------HPYEFSEEAIAAISRLA 231
+ + N H E E + L
Sbjct: 234 LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 273
>gi|56963428|ref|YP_175159.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16]
gi|56909671|dbj|BAD64198.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16]
Length = 445
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 22/129 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C +C FC + ++ S+D + + Q+ + E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFC-----IIPWARGLMRSRDPQEVVRQAQQLVHAGYKEIVLTG 196
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L L ++L+ L ++ ++ LR S ++ ++ E+I + ++
Sbjct: 197 IHTGGYGED---LKDYSLARLLEDLEKVEGLKRLRISS----IEASQLTDEVIAVIGKSS 249
Query: 205 KPVYIAIHA 213
K V +H
Sbjct: 250 K-VVRHMHI 257
>gi|115526530|ref|YP_783441.1| nitrogenase cofactor biosynthesis protein NifB [Rhodopseudomonas
palustris BisA53]
gi|115520477|gb|ABJ08461.1| nitrogenase cofactor biosynthesis protein NifB [Rhodopseudomonas
palustris BisA53]
Length = 518
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 70/217 (32%), Gaps = 38/217 (17%)
Query: 71 PEEREDPIGDN-NHSPLKGIV-HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQK 122
P + + + + P H + R+ + + C + C +C R+ G
Sbjct: 47 PADMPADVWEKVKNHPCYSEQAHHHFARMHVAVAPACNIQCNYCNRKYDCANESRPGVVS 106
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL---------------ILSHKRLQKVL 166
+ + + +A Q+ + G GDPL +L
Sbjct: 107 EKLTPEQAAKKVIAVASSVPQMTVLGVAGPGDPLANPQKTFKTFELVAATAPDIKLCLST 166
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--------PYE 218
L HV + + VD I +I E G +Y I NH
Sbjct: 167 NGLTLPDHVDRI----QAMNVDHVTITINMID--PEIGAKIYPWIFYNHRRYEGVEAAKI 220
Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
SE + + L GI++ SV++ GIND +
Sbjct: 221 LSERQLLGLEMLTARGILVKVNSVMIPGINDKHLVEV 257
>gi|58696768|ref|ZP_00372305.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
Drosophila simulans]
gi|58537042|gb|EAL60178.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
Drosophila simulans]
Length = 375
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 31/160 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +++ + C C FC E G+ + + + I+ ++ EV+FTG
Sbjct: 90 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVP-----INSIIEQIRIFVENGYQEVVFTG 144
Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--- 202
D +L L +++ L+ I ++ LR S +D ++ EL+ +
Sbjct: 145 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRLSS----IDVAEVDDELMDLIANESR 200
Query: 203 --AGKPVYIAIHAN---------HPYEFSEEAIAAISRLA 231
+ + N H E E + L
Sbjct: 201 LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 240
>gi|332981504|ref|YP_004462945.1| Radical SAM domain-containing protein [Mahella australiensis 50-1
BON]
gi|332699182|gb|AEE96123.1| Radical SAM domain protein [Mahella australiensis 50-1 BON]
Length = 454
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L L H C + C +CF + T++++ AAL ++ S EV F GG+PL
Sbjct: 99 LHLSHDCNMRCSYCFASTGDFGGQRTLMTADTGRAALDFLVRHSGSRRHLEVDFFGGEPL 158
Query: 156 ILSHKR--LQKVLKTLRYI--KHVQILRFHSRVPIVDPQRI 192
+ + + + L KH+ + +D ++I
Sbjct: 159 MNFDAMKDIVEYGRRLEQSSGKHI-RFTVTTNGIALDQEKI 198
>gi|85860271|ref|YP_462473.1| coproporphyrinogen oxidase (NAD) [Syntrophus aciditrophicus SB]
gi|85723362|gb|ABC78305.1| coproporphyrinogen oxidase (NAD) [Syntrophus aciditrophicus SB]
Length = 496
Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 69/227 (30%), Gaps = 31/227 (13%)
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D LIL + L V+ ++ ++ + R QR +L
Sbjct: 221 CFLGDADGLILKPEFLATVVNEIKSRFPSIKRFTVYGRTRTAARQRSLADLRAMAAAGLN 280
Query: 206 PVYI--------AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
V+ + + E S E + ++ AG+ ++ G+ +
Sbjct: 281 RVHFGVESGSDRVLAFMNKGESSAEHVEGCLKIKEAGLSCS--VYIMPGLGGTELSEEHA 338
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHF-RLTIEEGQ-----------KIVASLKEKISGLC 305
T R+ F + +E+ +I+ L+ ISG+
Sbjct: 339 TET---ARVINAAAPDFVRLRTLEIFPQTPLEKALKDGEFEECPEEQIIRELRIMISGIH 395
Query: 306 QPFYILDLPGG-----YGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+L YGK+ D K+ + ++D + + +
Sbjct: 396 VKTELLSDSASNLLDLYGKLPEDRGRFLKIIDDYLALSDRNKRIFSF 442
>gi|325267891|ref|ZP_08134541.1| molybdenum cofactor biosynthesis protein A [Kingella denitrificans
ATCC 33394]
gi|324980772|gb|EGC16434.1| molybdenum cofactor biosynthesis protein A [Kingella denitrificans
ATCC 33394]
Length = 324
Score = 41.0 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ +C C +C G K L+ + E A + ++ TGG+P +
Sbjct: 18 VTDLCNYRCNYCLPNGYQGKAKPDELTLPEIETLAAVFAQN-GTRKIRITGGEPTLRRD- 75
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ R +Q + +
Sbjct: 76 -LPDIIAACRAQPEIQHIALTTNAF 99
>gi|283785773|ref|YP_003365638.1| hypothetical protein ROD_20861 [Citrobacter rodentium ICC168]
gi|282949227|emb|CBG88837.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
Length = 436
Score = 41.0 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 29/216 (13%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RY L++ C C FC + A + + I V
Sbjct: 150 RYAPLALVQYSRGCRFACDFCS-IHAFYPDGVRTRPVEQIMAEIDALPGDRFIAFV---- 204
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
D L S K+L+ +L+ L I ++ R+ ++ I + + L+ L +AG +
Sbjct: 205 DDNLFASRKKLESLLEAL--IP-LKR-RWGCQISIDVAR--DEALLDRLAQAGCGFVLMG 258
Query: 212 --------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
NH + I L GI + + + D P+ +
Sbjct: 259 FESLNPANLRQMGKQWNHAA---GDYRRVIRALHARGICVYG-TFIFGYDGDTPDTVRQC 314
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
+ E R++ + G++ ++ EG+ I
Sbjct: 315 LAFAQETRLEIANFNLLIPTPGSALYQRLEAEGRLI 350
>gi|196248072|ref|ZP_03146774.1| Radical SAM domain protein [Geobacillus sp. G11MC16]
gi|196212856|gb|EDY07613.1| Radical SAM domain protein [Geobacillus sp. G11MC16]
Length = 372
Score = 41.0 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 60/176 (34%), Gaps = 16/176 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I + + ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYDMDEPM-LVFTGGD 65
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPIVDPQRINPELIQCLKEAGKPV--- 207
PL+ + L + LR S P V + I L +
Sbjct: 66 PLMRPD------VYDLAKYAIDKGLRVSMTPSATPNVTKEAIRKAKEVGLARWAFSLDGP 119
Query: 208 --YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H + I AI L I + +V+ + + + L+
Sbjct: 120 NAEIHDHFRGTSGSFDLTIRAIQYLHELDIPVQINTVISRYNVHVLDEMVELVEKL 175
>gi|32266519|ref|NP_860551.1| molybdenum cofactor biosynthesis protein A [Helicobacter hepaticus
ATCC 51449]
gi|32262570|gb|AAP77617.1| molybdenum cofactor biosynthesis protein A [Helicobacter hepaticus
ATCC 51449]
Length = 332
Score = 41.0 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 61/179 (34%), Gaps = 22/179 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ +C C++C + L + + + I ++ TGG+PL+ +
Sbjct: 17 VTKMCNFRCQYCMPDTPESFVDESALPLPKMLEFIK-LAIDNGIKKIRITGGEPLLRAD- 74
Query: 161 RLQKVLKTLRY-IKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGKPVYI 209
L + + H++ L S +++ RIN L LK +
Sbjct: 75 -LSAFIAQIYEYAPHIE-LTLTSNAFLLEKYAKDLKEAGLSRINISL-DSLKNERIKLI- 130
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ + + I + A G+ + V ++G+NDD + I+
Sbjct: 131 -----SKRDALPQILKGIHKAAALGLGIKLNMVPIQGVNDDEIVDMLHFAATYSFGIRF 184
>gi|331270008|ref|YP_004396500.1| MiaB-like tRNA modifying protein [Clostridium botulinum BKT015925]
gi|329126558|gb|AEB76503.1| MiaB-like tRNA modifying enzyme [Clostridium botulinum BKT015925]
Length = 433
Score = 41.0 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 54/155 (34%), Gaps = 23/155 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SK+ E + ++ + EVI +G
Sbjct: 141 KTRAFLKIQDGCNNFCSYCL-----IPFARGAVCSKNPETIIDEVKKLSEHGFKEVILSG 195
Query: 152 GDP------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--A 203
D L + L KVLK + I+ + +R S P + I E I LK+
Sbjct: 196 IDISSYGVDLEGNWNLL-KVLKAIDEIEGINRVRIGSIGPEFFDEDIIKE-IGSLKKLCP 253
Query: 204 GKPVYIAIHANHP------YEFSEEAIAAISRLAN 232
+ + N +EE I L
Sbjct: 254 HFHLSLQSGCNSTLKRMNRKYTTEEFRDIIVLLRK 288
>gi|291542691|emb|CBL15801.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Ruminococcus bromii
L2-63]
Length = 457
Score = 41.0 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + + ++S + + A+ ++ E S EV F GG+PL
Sbjct: 103 LHIAHTCNLNCEYCFASQGKYHGERALMSFEVGKRAIDFLIENSGSRVNLEVDFFGGEPL 162
Query: 156 ILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
++ +++++ R I +H + RF + ++ ++I+ + V +
Sbjct: 163 -MNFDVVKQIVAYARSIEKEHNKNFRFT---LTTNGMLVDDDVIEFANKECHNVVL 214
>gi|226311189|ref|YP_002771083.1| menaquinone biosynthesis protein [Brevibacillus brevis NBRC 100599]
gi|226094137|dbj|BAH42579.1| putative menaquinone biosynthesis protein [Brevibacillus brevis
NBRC 100599]
Length = 368
Score = 41.0 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
+VC YCRFC GS +G VL + IQE + E++ GG
Sbjct: 60 TNVCDTYCRFCAFYRPPGSSEGYVLPRETI---FEKIQETVDVGGTEILMQGG---TNPD 113
Query: 160 KRLQKVLKTLRYIK 173
+L LR IK
Sbjct: 114 LKLDYYTDLLRAIK 127
>gi|328881507|emb|CCA54746.1| Molybdenum cofactor biosynthesis protein MoaA [Streptomyces
venezuelae ATCC 10712]
Length = 329
Score = 40.6 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 13/158 (8%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + K +L+ + + + EV FTGG+PL+
Sbjct: 17 LTDRCNLRCTYCMPEEGLQWLAKPDLLTDDEIVRLIRIAVTDLGVTEVRFTGGEPLLRP- 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHS------RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L +++ ++ + + R + L V+ +
Sbjct: 76 -GLVGIVERCAALEPRPRMSLTTNGIGLKRTAAALKAAGLDRVNVSLDTLRPDVFKTLTR 134
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ ++ + ++ +AG+ + +VL+ G+N D
Sbjct: 135 ---RDRHQDVLDGMAAARDAGLTPVKVNAVLMPGLNAD 169
>gi|288942731|ref|YP_003444971.1| nitrogenase cofactor biosynthesis protein NifB [Allochromatium
vinosum DSM 180]
gi|288898103|gb|ADC63939.1| nitrogenase cofactor biosynthesis protein NifB [Allochromatium
vinosum DSM 180]
Length = 500
Score = 40.6 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 60/196 (30%), Gaps = 46/196 (23%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + + LA Q+
Sbjct: 46 HHHYARMHVAVAPACNIQCHYCNRKYDCANESRPGVVSELLTPDQAVKKVLAVAAAIPQM 105
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ G GDPL + L+ + +++ + + P+L+ L +
Sbjct: 106 TVLGIAGPGDPLANPERTLETFRQLAEKAPDIRLC-VSTNGLAL------PDLVDELCQY 158
Query: 204 GKPVYIAIHANHPYEFSEEA----------------------------IAAISRLANAGI 235
N + + +L G+
Sbjct: 159 NIEHVTIT-INC---VDPDVGAKIYPWIFWNNRRIKGRKAAEILIRRQQEGLEKLVARGV 214
Query: 236 ILLSQSVLLKGINDDP 251
++ SVL+ G+ND+
Sbjct: 215 LVKVNSVLIPGVNDEH 230
>gi|239831834|ref|ZP_04680163.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum
intermedium LMG 3301]
gi|239824101|gb|EEQ95669.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum
intermedium LMG 3301]
Length = 369
Score = 40.6 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 60/161 (37%), Gaps = 19/161 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYIQEKSQIWEVIFTGGDPLILSH 159
+ C C +C M K +L+ ++ + A+I + ++ TGG+PL+ +
Sbjct: 56 VTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCTAFI--DKGVRKLRLTGGEPLVRKN 113
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQC-LKEAGKPV-YIAIHAN 214
+ +++ L H++ + R EL +C ++ + +
Sbjct: 114 --IMHLIRQLSR--HLKSGALDELTLTTNGSQLSRFADELAECGIRRINVSLDTLDPEKF 169
Query: 215 HPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + + + I AGI + +V LK N+
Sbjct: 170 H--QITRWGDLPRVLEGIEAAQRAGIRVKINAVALKDFNEH 208
>gi|225155269|ref|ZP_03723763.1| nitrogenase cofactor biosynthesis protein NifB [Opitutaceae
bacterium TAV2]
gi|224804024|gb|EEG22253.1| nitrogenase cofactor biosynthesis protein NifB [Opitutaceae
bacterium TAV2]
Length = 440
Score = 40.6 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 71/228 (31%), Gaps = 34/228 (14%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQEK-SQIWEV 147
H RI L + C + C FC R+ ++ ++S A Y+ + ++ +
Sbjct: 34 HHTHGRIHLPVAPRCNLQCNFCNRKFDCMNESRPGVTSAVLTPSQAADYLDDTLKRVPNL 93
Query: 148 IFTG----GDPLI---------------LSHKRLQKVLKTLRYIKHVQILR------FHS 182
TG GDP L L H+ L
Sbjct: 94 AVTGIAGPGDPFANAVETMATLTAVRRRHKDMILCLATNGLGLAPHIDNLAALQVSHVTL 153
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
V VDP+ I + +++ +P + I AI RL GI++ ++
Sbjct: 154 TVNAVDPE-IGARIYAWIRDGHRP---MRGLAAAQLLLDRQIDAIQRLKQHGIVVKINTI 209
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
++ GIND L + AG + +G
Sbjct: 210 IMPGINDQHIEDVA--VKMAALDVDIMNCMAFLPVAGAEFENIPPPDG 255
>gi|319759064|gb|ADV71006.1| metallo cofactor biosynthesis protein [Streptococcus suis JS14]
Length = 413
Score = 40.6 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP +I+++L + C + C CF+ G L ++ L ++ +++E+ TGG
Sbjct: 100 YPRKIVIELTNKCHLQCTHCFKEA--GPINRNFLKYEELINFLDRVKG--KVYEIQLTGG 155
Query: 153 DPLILSHKR 161
+P+ H +
Sbjct: 156 EPMAHPHFK 164
>gi|253999234|ref|YP_003051297.1| pyrroloquinoline quinone biosynthesis protein PqqE [Methylovorus
sp. SIP3-4]
gi|253985913|gb|ACT50770.1| coenzyme PQQ biosynthesis protein E [Methylovorus sp. SIP3-4]
Length = 395
Score = 40.6 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 56/182 (30%), Gaps = 35/182 (19%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L ++ + CP++C FC+ L+++ AL ++ + + +GG+PL+
Sbjct: 21 LLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARKMGALQ-LGISGGEPLL 79
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
I+ + +R I L E + +H
Sbjct: 80 RDD------------IEDIVR---EARQLGYYSNLITSG--VGLTEKRIQEFKEGGLDHI 122
Query: 217 Y----EFSEEA-------------IAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ +EE + + G ++ V+ + + + +
Sbjct: 123 QLSMHDITEEINNFITNTKTFELKKKVAAMIKGHGYPMVLNVVIHRYNIGHIKEILEMAE 182
Query: 260 TF 261
Sbjct: 183 AL 184
>gi|146319650|ref|YP_001199362.1| metallo cofactor biosynthesis protein [Streptococcus suis 05ZYH33]
gi|146321848|ref|YP_001201559.1| metallo cofactor biosynthesis protein [Streptococcus suis 98HAH33]
gi|253752648|ref|YP_003025789.1| radical SAM superfamily protein [Streptococcus suis SC84]
gi|253754474|ref|YP_003027615.1| radical SAM superfamily protein [Streptococcus suis P1/7]
gi|253756407|ref|YP_003029547.1| radical SAM superfamily protein [Streptococcus suis BM407]
gi|145690456|gb|ABP90962.1| metallo cofactor biosynthesis protein [Streptococcus suis 05ZYH33]
gi|145692654|gb|ABP93159.1| metallo cofactor biosynthesis protein [Streptococcus suis 98HAH33]
gi|251816937|emb|CAZ52586.1| radical SAM superfamily protein [Streptococcus suis SC84]
gi|251818871|emb|CAZ56714.1| radical SAM superfamily protein [Streptococcus suis BM407]
gi|251820720|emb|CAR47482.1| radical SAM superfamily protein [Streptococcus suis P1/7]
gi|292559267|gb|ADE32268.1| metallo cofactor biosynthesis protein [Streptococcus suis GZ1]
Length = 415
Score = 40.6 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP +I+++L + C + C CF+ G L ++ L ++ +++E+ TGG
Sbjct: 102 YPRKIVIELTNKCHLQCTHCFKEA--GPINRNFLKYEELINFLDRVKG--KVYEIQLTGG 157
Query: 153 DPLILSHKR 161
+P+ H +
Sbjct: 158 EPMAHPHFK 166
>gi|20089140|ref|NP_615215.1| hypothetical protein MA0242 [Methanosarcina acetivorans C2A]
gi|19914008|gb|AAM03695.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 373
Score = 40.6 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 11/114 (9%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQK-----GTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R +++ CP CR+C + G + +VL + L +I
Sbjct: 142 RAPIEISRGCPWGCRYCQTPRLFGREVRHRSIDSVLKNARYYDDLRFIASN-----AFAY 196
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D + +++K+L L + +I F + V P+ + E ++ +++
Sbjct: 197 GSDGIHPRFDKVEKLLSALHELPDKKIF-FGTFPSEVRPEFVTEESVELVRKYC 249
>gi|313201322|ref|YP_004039980.1| coenzyme pqq biosynthesis protein e [Methylovorus sp. MP688]
gi|312440638|gb|ADQ84744.1| coenzyme PQQ biosynthesis protein E [Methylovorus sp. MP688]
Length = 394
Score = 40.6 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 56/182 (30%), Gaps = 35/182 (19%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L ++ + CP++C FC+ L+++ AL ++ + + +GG+PL+
Sbjct: 20 LLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARKMGALQ-LGISGGEPLL 78
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
I+ + +R I L E + +H
Sbjct: 79 RDD------------IEDIVR---EARQLGYYSNLITSG--VGLTEKRIQEFKEGGLDHI 121
Query: 217 Y----EFSEEA-------------IAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ +EE + + G ++ V+ + + + +
Sbjct: 122 QLSMHDITEEINNFITNTKTFELKKKVAAMIKGHGYPMVLNVVIHRYNIGHIKEILEMAE 181
Query: 260 TF 261
Sbjct: 182 AL 183
>gi|288927648|ref|ZP_06421495.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 317 str.
F0108]
gi|288330482|gb|EFC69066.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 317 str.
F0108]
Length = 446
Score = 40.6 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 74/221 (33%), Gaps = 28/221 (12%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ R LK+ C +C +C G + ++S + A
Sbjct: 143 TFAPSCSRGNRTRYFLKVQDGCDYFCTYCTIPFARGFSRNPSIAS-LVQQAHD--AANDG 199
Query: 144 IWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E++ TG G+ ++R ++K L ++ +Q R S ++P + ELI
Sbjct: 200 GKEIVLTGVNIGEFKGGGNERFIDLVKALDQVEGIQRFRISS----IEPNLLTDELIDYC 255
Query: 201 KEAGKPVYIAIHANHP-YEFSEEAIAAISR-----LANAGIILLSQ---------SVLLK 245
+ H + P S+E + + R L + L+ Q V++
Sbjct: 256 ASSR---AFMPHFHIPLQSGSDEVLKLMQRRYDTALFAHKVQLIKQRIPNAFIGVDVMVG 312
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
++P L I ++ GT+ R+
Sbjct: 313 SRGEEPAYFEECYDFLKSLDISQLHVFPYSERPGTAALRIP 353
>gi|313499923|gb|ADR61289.1| Molybdenum cofactor synthesis domain-containing protein
[Pseudomonas putida BIRD-1]
Length = 322
Score = 40.6 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C LS+ +AY+ E + I + TGG+PL+
Sbjct: 17 LTAACNYACTYCVPDGKRLVAAQDELSADALARGVAYLIEAAGIERLRITGGEPLVSP-- 74
Query: 161 RLQKVLKTLRYIK 173
RL L + +
Sbjct: 75 RLDAFLAAVAKLD 87
>gi|261414525|ref|YP_003248208.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370981|gb|ACX73726.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327031|gb|ADL26232.1| radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 358
Score = 40.6 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 41/110 (37%), Gaps = 12/110 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
+ + C ++C C + + +D L + V+ TGG+P
Sbjct: 30 LFWECTLRCNLHCLHCGSDC--VADAIPDMPREDFMRVLDGVSPHVDPSNFIVVITGGEP 87
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKE 202
L+ + L+++ K ++ + + + ++P+R + L+
Sbjct: 88 LMRAD--LEEIGKDIKA----RGYPWGMVTNGLALNPERYTKLMNAGLRA 131
>gi|298490560|ref|YP_003720737.1| nitrogenase cofactor biosynthesis protein NifB ['Nostoc azollae'
0708]
gi|298232478|gb|ADI63614.1| nitrogenase cofactor biosynthesis protein NifB ['Nostoc azollae'
0708]
Length = 479
Score = 40.6 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 81/242 (33%), Gaps = 33/242 (13%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + L + Q+
Sbjct: 55 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAHKVLVIAGKIPQM 114
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI----------VDPQRIN 193
+ G GDPL K + +++ + + ++ +
Sbjct: 115 TVLGVAGPGDPLANPEKTFRTFELIADKAPDIKLC-LSTNGLMLPEYIDRIKQLNIDHVT 173
Query: 194 PELIQCLKEAGKPVYIAIHANH--------PYEFSEEAIAAISRLANAGIILLSQSVLLK 245
L E G +Y +H E+ + + L A I+ SV++
Sbjct: 174 ITLNTIDPEIGAQIYAWVHYKRKRYKGVEGAKILLEKQLEGLQALKEADILCKVNSVMIP 233
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAA-GTSHFRLTIEE---GQKIVASLKEKI 301
GIND + N M E + + A +HF LT + G+++ +++
Sbjct: 234 GINDHHLVEVNKMIR--ENGAFLHNIMPLISAPEHGTHFGLTHQRGPTGKEL-KEVQDNC 290
Query: 302 SG 303
SG
Sbjct: 291 SG 292
>gi|226510327|ref|NP_001140457.1| hypothetical protein LOC100272516 [Zea mays]
gi|194699592|gb|ACF83880.1| unknown [Zea mays]
gi|194704796|gb|ACF86482.1| unknown [Zea mays]
Length = 393
Score = 40.6 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + + L C + C++C E V + K +LS + + S + ++
Sbjct: 75 RFHNYLRISLTERCNLRCQYCMPAEGVELTPKSELLSHDEIIRIAD-LFVTSGVNKIRLI 133
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+P + ++ + L +K ++ L + ++
Sbjct: 134 GGEPTVRKD--IEDICLHLSSLKGLKTLAMTTNGIVLSK 170
>gi|253997401|ref|YP_003049465.1| molybdenum cofactor biosynthesis protein A [Methylotenera mobilis
JLW8]
gi|253984080|gb|ACT48938.1| molybdenum cofactor biosynthesis protein A [Methylotenera mobilis
JLW8]
Length = 341
Score = 40.6 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 25/163 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLILS 158
+ C C +C EM + VLS E L ++ + + +V TGG+PL+
Sbjct: 31 ITDRCDFRCTYCMAEEMTFLPRDEVLS---LEECLRLVKAFVQLGVTKVRITGGEPLVRK 87
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGKPVY 208
+ + + + ++ ++ L + ++ Q RIN L E K +
Sbjct: 88 NAL--WLFEEVGKLERLKELVLTTNGSQLEKQAASLKQAGVKRINISLDSLNSERFKKI- 144
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + + I AG + +VL++G NDD
Sbjct: 145 -----TRTGELD-KVLHGIQAAKQAGFDNIKLNTVLMRGTNDD 181
>gi|159044234|ref|YP_001533028.1| hypothetical protein Dshi_1685 [Dinoroseobacter shibae DFL 12]
gi|157911994|gb|ABV93427.1| hypothetical protein Dshi_1685 [Dinoroseobacter shibae DFL 12]
Length = 314
Score = 40.6 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 59/155 (38%), Gaps = 14/155 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQIWEVIFTGG 152
P + +C + C C+ + + +++ + L ++ + E+ FTGG
Sbjct: 31 PQTLWFNTGTLCNIECANCYIESSPTNDRLVYITAAEVTDYLDQLEDRNWGVREIAFTGG 90
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+P ++ + ++ L V I + + + + + L++ G + + I
Sbjct: 91 EPF-MNPEMIEMTEAALARGYEVLI--LTNAMLPMMRKTMREGLLRLHAAYGDKLTLRIS 147
Query: 213 ANHPYE-FSEE---------AIAAISRLANAGIIL 237
+H E +E + ++ L + GI +
Sbjct: 148 VDHWSEKLHDEERGKGSFAKTLQGMAWLRDNGIRM 182
>gi|313202011|ref|YP_004040669.1| molybdenum cofactor biosynthesis protein a [Methylovorus sp. MP688]
gi|312441327|gb|ADQ85433.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp. MP688]
Length = 336
Score = 40.6 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Query: 78 IGDNNHSPLKGIVH--RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
+G H P I R D I L + C C +C +M + VLS ++ +
Sbjct: 1 MGKQLHIPDALIDQFGRKVDYIRLSITDRCDFRCVYCMAEDMTFLPRDEVLSLEECARLV 60
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ + +V TGG+PL+ + + + + + ++ ++ L + ++ Q
Sbjct: 61 KIFVQM-GVSKVRITGGEPLVRKNAQ--WLFEEIGHLPGLKELVVTTNGSQLEHQ 112
>gi|333030948|ref|ZP_08459009.1| Radical SAM domain protein [Bacteroides coprosuis DSM 18011]
gi|332741545|gb|EGJ72027.1| Radical SAM domain protein [Bacteroides coprosuis DSM 18011]
Length = 386
Score = 40.6 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
++ + C + C FC T + D A I + E V+ TGG+P
Sbjct: 47 LMWECTVRCNLSCSFCGNGSCRKDTMLTDMPLYDFLKAFDEIAPQIDPQETRVVLTGGEP 106
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRIN 193
L+ + L++ + L + ++ + I++ QR+
Sbjct: 107 LLRTD--LEECGRELSK----RGFKWGIITNALILEKQRLT 141
>gi|331269617|ref|YP_004396109.1| MiaB family RNA modification protein [Clostridium botulinum
BKT015925]
gi|329126167|gb|AEB76112.1| RNA modification enzyme, MiaB family [Clostridium botulinum
BKT015925]
Length = 444
Score = 40.6 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 17/130 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTG 151
+++ C +C +C + + S+ ++ + +E S + E+I G
Sbjct: 144 KHVAYIRISEGCDNFCTYC-----IIPKIRGKYRSRSIDSIVKEAKELSAMGVKELILVG 198
Query: 152 GDPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D I + +L ++++ + I+ ++ +R P+ I ELI+ +K K
Sbjct: 199 QDTAIYGRDIYNENKLPELIRAISEIEAIEWIRV----LYTYPEEITDELIEEIKSNDKV 254
Query: 207 V-YIAIHANH 215
Y+ I H
Sbjct: 255 CNYLDIPIQH 264
>gi|219853188|ref|YP_002467620.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
gi|219547447|gb|ACL17897.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
Length = 399
Score = 40.6 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 73/217 (33%), Gaps = 35/217 (16%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y I L C + C C+ + L++ + + + + ++FTGG
Sbjct: 39 YRPVIFWNLTDRCNLSCNHCYNQSGPERTTEGELTTAEALKVIDDL-ADMGVPLILFTGG 97
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
+PL+ + L + ++ + + + I P++ + +KE+G
Sbjct: 98 EPLMRADI---WDLAQHARNRGLK-MALSTNGTL-----ITPDIARRIKESGIEYAGISL 148
Query: 209 ----IAIH---ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
H N P F E+ +AA + AG+ + L K + E L +L +
Sbjct: 149 DGARAETHDRFRNSPGAF-EQTLAAFAACKEAGLRCGVRVTLTKENCRELEALVDLAISL 207
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
R ++ + G L+
Sbjct: 208 GASR-------------FCLYWLVPTGRGIDSYTQLQ 231
>gi|319943485|ref|ZP_08017767.1| molybdenum cofactor biosynthesis protein A [Lautropia mirabilis
ATCC 51599]
gi|319743300|gb|EFV95705.1| molybdenum cofactor biosynthesis protein A [Lautropia mirabilis
ATCC 51599]
Length = 381
Score = 40.6 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE+ G G++LS ++ +A + + ++ TGG+PL
Sbjct: 54 VTDRCNFRCSYCMPREVFGKDHEFLSHGSLLSFEEITR-VAGLMVGLGVKKIRLTGGEPL 112
Query: 156 ILSHKRLQKVLKTLRYIKH 174
+ L+ ++ L ++
Sbjct: 113 LRRD--LETLIAQLSCLRQ 129
>gi|306821073|ref|ZP_07454691.1| MiaB family tRNA modification enzyme [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550909|gb|EFM38882.1| MiaB family tRNA modification enzyme [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 452
Score = 40.6 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 38/146 (26%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S++ + +Q + EV+ TG
Sbjct: 143 NTRAFVKIQDGCDRYCSYC-----IIPYTRGRIRSRNIGDIVKEVQSLSDNGYKEVVLTG 197
Query: 152 ------------------------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
D I L V++ + IK + +R S V
Sbjct: 198 IHIASYGKDLKKSKDKLIPIIHSQKDDFIQEDISLIDVIEEVSKIKDIHRVRIGS----V 253
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHA 213
+P I+ + +Q L + K H
Sbjct: 254 EPIIISDDFLQRLTKIEK---FCPHF 276
>gi|193216143|ref|YP_001997342.1| radical SAM domain-containing protein [Chloroherpeton thalassium
ATCC 35110]
gi|193089620|gb|ACF14895.1| Radical SAM domain protein [Chloroherpeton thalassium ATCC 35110]
Length = 353
Score = 40.6 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 11/148 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++L + C + C +C+ R + +S + E AL + + V TGG+
Sbjct: 9 PRNVMLMVTGDCNLTCAYCYERGDAKYKSRRPMSLEIAEKALRLAASSGKAFHVQLTGGE 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P + L+ ++K R + + + ++ + L+ + I++
Sbjct: 69 PTLEQDLVLE-IIKKTRAVSPESTISLQTNGTLLSRA-----FLGQLRTHRVKIGISLDG 122
Query: 214 -----NHPYEFSEEAIAAISRLANAGII 236
S + + L GI
Sbjct: 123 VPDVQESIRGRSAQTFQGMKLLREEGIP 150
>gi|170722117|ref|YP_001749805.1| radical SAM domain-containing protein [Pseudomonas putida W619]
gi|169760120|gb|ACA73436.1| Radical SAM domain protein [Pseudomonas putida W619]
Length = 476
Score = 40.6 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 77/227 (33%), Gaps = 34/227 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTG 151
+ ++L + C + C +C++ ++ G +S+ EA++ + Q + V+F G
Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTATAEASVEMLLKESPDEQRYSVVFFG 161
Query: 152 GDPLI---LSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G+PL L + + K V+ + + + E + L +
Sbjct: 162 GEPLSNRPLIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEETVDWLNAHRFGL 215
Query: 208 YIAIHANHPYEFS-------------EEAIAAISRL--ANAGIILLSQSVLLKGINDDPE 252
+ + P + L + ++ L +GI D
Sbjct: 216 SV--SIDGPKTVHDRNRITVGGQGTYDVVRRKADMLLSRYTSRPVGARVTLTRGITDVET 273
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
I +L + + D + F LT +E ++ A++K
Sbjct: 274 IWNHLFNEMGFAEVGFAPVTSGD----MADFNLTGDELVEVFANMKA 316
>gi|104782043|ref|YP_608541.1| hypothetical protein PSEEN2976 [Pseudomonas entomophila L48]
gi|95111030|emb|CAK15750.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 476
Score = 40.6 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 77/227 (33%), Gaps = 34/227 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTG 151
+ ++L + C + C +C++ ++ G ++S EA++ + + V+F G
Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGRKMNSATAEASVEMLLRESPDEARYSVVFFG 161
Query: 152 GDPLI---LSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G+PL L + + K V+ + + + E++ L +
Sbjct: 162 GEPLSNRALIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEEIVDWLDAHRFGL 215
Query: 208 YIAIHANHPYEFS-------------EEAIAAISRL--ANAGIILLSQSVLLKGINDDPE 252
+ + P + L + ++ L +GI D
Sbjct: 216 SV--SIDGPKTVHDRNRITVGGQGTYDVVRRKADMLLSRYRSRPVGARVTLTRGITDVET 273
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
I +L + + D + F LT +E ++ A++K
Sbjct: 274 IWNHLFNELGFAEVGFAPVTSGD----MADFNLTGDELVQVFANMKA 316
>gi|323698700|ref|ZP_08110612.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio sp.
ND132]
gi|323458632|gb|EGB14497.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio
desulfuricans ND132]
Length = 422
Score = 40.6 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 30/219 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAY----IQEKSQIWEVI 148
R+ L + C + C +C R+ ++ ++S + A Y ++++ +I
Sbjct: 20 GRVHLPVAPKCNIQCNYCNRKYDCVNESRPGVTSGVLKPFQAAEYMEKVLEKEPRITVAG 79
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDPQ---------------- 190
G GDP + L+ + L KH + I + + P
Sbjct: 80 IAGPGDPFANPAETLETM--RLLNAKHPELIFCLSTNGMGILPYLDDIAELGVSHVTITI 137
Query: 191 -RINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN 248
++P + + K + H E + + AI L GI + S+++ GIN
Sbjct: 138 SAVDPAIGAQIYAWVKDGNVVYHGEKGAEILLDRQLKAIKGLKERGITVKINSIVIPGIN 197
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
D + + L + A T +
Sbjct: 198 DHHLVEVAKV--CASLGADIQNMIPLKPTADTPFAGIPE 234
>gi|254000035|ref|YP_003052098.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp.
SIP3-4]
gi|253986714|gb|ACT51571.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp.
SIP3-4]
Length = 336
Score = 40.6 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Query: 78 IGDNNHSPLKGIVH--RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
+G H P I R D I L + C C +C +M + VLS ++ +
Sbjct: 1 MGKQLHIPDALIDQFGRKVDYIRLSITDRCDFRCVYCMAEDMTFLPRDEVLSLEECARLV 60
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ + +V TGG+PL+ + + + + + ++ ++ L + ++ Q
Sbjct: 61 KIFVQM-GVSKVRITGGEPLVRKNAQ--WLFEEIGHLPGLKELVVTTNGSQLEHQ 112
>gi|126309965|ref|XP_001379493.1| PREDICTED: similar to Molybdenum cofactor biosynthesis protein 1 B
(MOCS1B) (Molybdenum cofactor synthesis-step 1 protein
A-B) (Molybdenum cofactor biosynthesis protein C)
[Monodelphis domestica]
Length = 626
Score = 40.6 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + L+ + K + ++
Sbjct: 56 GRRHNYLRISL---TEKCNLRCQYCMPEEGVPLTPKADLLTTREILTLSRLFVKEGVDKI 112
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ + ++ + +
Sbjct: 113 RLTGGEPLIRPDVV--DIVAQLQQLDSLKTIAITTNGI 148
>gi|54024605|ref|YP_118847.1| hypothetical protein nfa26360 [Nocardia farcinica IFM 10152]
gi|54016113|dbj|BAD57483.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 526
Score = 40.6 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 21/186 (11%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P K L P DP+ L + ++ +L +L C + C CF
Sbjct: 87 PTKAHLPDTP-GNFDPVPAAYLRGLPEMQTQHTCILLADILAGCNLRCPTCFADSTPELA 145
Query: 122 KGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
++ + + LA +E ++ ++ +GG+P + L +L L + +
Sbjct: 146 GVVAVADVLANVDQRLA--REHGRLDVLMLSGGEPTLHPD--LPTLLAELTARP-ITRIL 200
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN--------HPY--EFSEEAIAAISR 229
++ + + L+ L E + V + + + H + A+ R
Sbjct: 201 INTNGVRLAR---DESLVALLAEHRERVEVYLQYDGVSAAASRHHRGGDLRALKAEALRR 257
Query: 230 LANAGI 235
L+ GI
Sbjct: 258 LSGHGI 263
>gi|332306468|ref|YP_004434319.1| molybdenum cofactor biosynthesis protein A [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332173797|gb|AEE23051.1| molybdenum cofactor biosynthesis protein A [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 322
Score = 40.6 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 48/155 (30%), Gaps = 10/155 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C LS + + + + ++ TGG+P +
Sbjct: 17 ITDVCNFSCEYCLPDGYQCDTPRDFLSLNEIKRIASAFAQ-LGTSKIRITGGEPSLRKD- 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-----YIAIHANH 215
L + ++ ++ + + P+ I+ + L + +
Sbjct: 75 -LPQAIRACATTPGIKQVAITTNG-YKLPEHIDSWVDAGLTSMNISIDSLDPRMFASITG 132
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ I R G+ + +VL++ N
Sbjct: 133 HDKLDVILR-GIDRAIELGVTVKVNAVLMRHFNQH 166
>gi|56419300|ref|YP_146618.1| hypothetical protein GK0765 [Geobacillus kaustophilus HTA426]
gi|56379142|dbj|BAD75050.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 372
Score = 40.6 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 61/176 (34%), Gaps = 16/176 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPIVDPQRINPELIQCLKEAGKPV--- 207
PL+ + L + LR S P V + I L +
Sbjct: 66 PLMRPD------VYDLAKYAIDKGLRVSMTPSATPNVTKEAIRKAKEVGLSRWAFSLDGP 119
Query: 208 --YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H + I AI L I + +V+ + + +A L+
Sbjct: 120 NAEIHDHFRGVSGSFDLTIRAIHYLHELDIPVQINTVISRYNVHVLDEMAELVEKL 175
>gi|332265051|ref|XP_003281542.1| PREDICTED: molybdenum cofactor biosynthesis protein 1 [Nomascus
leucogenys]
Length = 409
Score = 40.6 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ G H Y L C + C++C E V L + + LA + K
Sbjct: 86 TDTFGRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEG 142
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ ++ TGG+PLI ++ L+ ++ ++ + +
Sbjct: 143 VDKIRLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 182
>gi|150014681|gb|ABR57203.1| PeaB [Pseudomonas putida]
Length = 476
Score = 40.6 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 81/227 (35%), Gaps = 34/227 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTG 151
+ ++L + C + C +C++ ++ G +S+ EA++ + + + V+F G
Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTATAEASVEMLLKESPDEERYSVVFFG 161
Query: 152 GDPLI---LSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G+PL L + + K V+ + + + E++ L +
Sbjct: 162 GEPLSNRPLIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEEIVDWLNAHRFGL 215
Query: 208 YIAIHANHPYEFS-------------EEAIAAISRLANA--GIILLSQSVLLKGINDDPE 252
I + P + L + + ++ L +GI D
Sbjct: 216 SI--SIDGPKTVHDRNRITVGGQGTYDVVRRKADMLLSRYNSRPVGARVTLTRGITDIET 273
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
I +L + + D+AA F LT EE ++ A++K
Sbjct: 274 IWNHLFNEMGFAEVGFAPVTSGDMAA----FNLTGEELVEVFANMKA 316
>gi|148691685|gb|EDL23632.1| molybdenum cofactor synthesis 1, isoform CRA_b [Mus musculus]
Length = 449
Score = 40.6 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 22/143 (15%)
Query: 49 PHNPNDP------IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
P P+ P + QF+ +E P + G H Y L
Sbjct: 32 PGEPSRPTREGLSLRLQFL----------QEHAAPFS-AFLTDSFGRQHSYLRISL---T 77
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C + C++C E V L + + LA + K + ++ TGG+PLI
Sbjct: 78 EKCNLRCQYCMPEEGVPLTPKADLLTTEEILTLARLFVKEGVDKIRLTGGEPLIRPDVV- 136
Query: 163 QKVLKTLRYIKHVQILRFHSRVP 185
++ L ++ ++ + +
Sbjct: 137 -DIVARLHGLEGLRTIGLTTNGI 158
>gi|170720721|ref|YP_001748409.1| molybdenum cofactor synthesis domain-containing protein
[Pseudomonas putida W619]
gi|169758724|gb|ACA72040.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida
W619]
Length = 322
Score = 40.6 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C LS++ +AY+ E + I + TGG+PL+
Sbjct: 17 LTAACNYACSYCVPNGKRLVAAQDELSAEALARGVAYLIEAAGIERLRITGGEPLVSP-- 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
RL L + ++ +Q + +
Sbjct: 75 RLNAFLAAVAKLE-LQDITLTTNG 97
>gi|114607312|ref|XP_527381.2| PREDICTED: molybdenum cofactor synthesis-step 1 protein isoform 5
[Pan troglodytes]
Length = 638
Score = 40.6 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K + ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGVDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 158
>gi|114607314|ref|XP_001173942.1| PREDICTED: molybdenum cofactor synthesis-step 1 protein isoform 3
[Pan troglodytes]
Length = 620
Score = 40.6 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K + ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGVDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 158
>gi|114607310|ref|XP_001173946.1| PREDICTED: molybdenum cofactor synthesis-step 1 protein isoform 4
[Pan troglodytes]
Length = 620
Score = 40.6 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K + ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGVDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 158
>gi|197098710|ref|NP_001126377.1| molybdenum cofactor biosynthesis protein 1 [Pongo abelii]
gi|55731254|emb|CAH92341.1| hypothetical protein [Pongo abelii]
Length = 385
Score = 40.6 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C++C E V L + + LA + K + ++
Sbjct: 66 GRQHSYLRISL---TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGVDKI 122
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI ++ L+ ++ ++ + +
Sbjct: 123 RLTGGEPLIRPDVV--DIVAQLQRLEGLRTIGVTTNGI 158
>gi|238019340|ref|ZP_04599766.1| hypothetical protein VEIDISOL_01204 [Veillonella dispar ATCC 17748]
gi|237864039|gb|EEP65329.1| hypothetical protein VEIDISOL_01204 [Veillonella dispar ATCC 17748]
Length = 431
Score = 40.6 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 23/128 (17%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
R +K+ C YC FC + L S+ + + + + E++ TG
Sbjct: 145 RAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVQEAKRLVEHGFHEIVLTG-- 197
Query: 154 PLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L + L V+K L I + +RF S + ++ EL++ L K
Sbjct: 198 -IHLGNYGVELPGRPTLADVVKALLEIPDLYRIRFGSIESV----EVSDELVE-LMATNK 251
Query: 206 PVYIAIHA 213
V +H
Sbjct: 252 RVCPHLHL 259
>gi|227874225|ref|ZP_03992425.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Oribacterium sinus F0268]
gi|227839933|gb|EEJ50363.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Oribacterium sinus F0268]
Length = 328
Score = 40.6 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 61/170 (35%), Gaps = 14/170 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C ++C++C + +L+ ++ I TGG+PL+
Sbjct: 14 MSITDRCNLHCQYCMPNGLENPLPMDRLLTYEELLQVAKAAVAC-GITRFKVTGGEPLVR 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA-NHP 216
+ +L+ + V+ + + ++ Q + G V +
Sbjct: 73 KGAV--DFMASLKALPGVEQVTITTNGLLLSEAL---PRFQEMGLDGINVSLDTLIPERF 127
Query: 217 YEFS--EEAIAAISRLANA---GIILLSQSVLLKGINDD-PEILANLMRT 260
YE + + + + A GI + +VL KG+N+D L L +
Sbjct: 128 YEITGFDALDKVLQGIKEAVVSGIPVKLNTVLQKGVNEDEIFALLALCKK 177
>gi|301058107|ref|ZP_07199159.1| molybdenum cofactor biosynthesis protein A [delta proteobacterium
NaphS2]
gi|300447739|gb|EFK11452.1| molybdenum cofactor biosynthesis protein A [delta proteobacterium
NaphS2]
Length = 333
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 84 SPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQ 139
+ ++ Y + + C + C++C E + +LS ++ +
Sbjct: 3 TKHHCLIDHYQRHLNYLRISITDRCNLRCQYCMPPEGREKLRHEDILSYEEILRLAR-VA 61
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + ++ TGG+PL+ L +L L I ++ + +
Sbjct: 62 IRLGVDKIRLTGGEPLVRKDFPL--LLPELMSIPGLKDVSITTNGI 105
>gi|262182625|ref|ZP_06042046.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
aurimucosum ATCC 700975]
Length = 335
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 39/219 (17%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E LS ++T + +K I +V FTGG+PL+
Sbjct: 15 LTDRCNLRCTYCMPAEGYEWLPTEHTLSDEETIRLIRLAVDKLGIQQVRFTGGEPLLRG- 73
Query: 160 KRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP-----------------QRINPELIQ 198
L+K++ + + + + + +D ++PEL
Sbjct: 74 -SLEKIIAATKALTTDEGRSPTVALTTNGLGLDKRLPGLQRAGLDRVNISLDTLDPELYA 132
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
L + + + + +V++ G+N+ + L
Sbjct: 133 RLTRRDRLADVLTSIEAALAADMD-------------PVKINAVIMPGVNESA--ILPLA 177
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
R +E + ++ L R + + I+A L
Sbjct: 178 RFCLERGAQLRFIEQMPLGPQEEWARSRMVTAEDILARL 216
>gi|239993006|ref|ZP_04713530.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii
ATCC 27126]
Length = 322
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 18/159 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C++C G ++ + + L + +V TGG+P L
Sbjct: 17 VTEACNFRCQYCLPDGYEGPTSDQFMTLNEIDTLLKAFAK-LGTSKVRLTGGEP-TLRRD 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEF 219
L +L+ ++ + + + + KEAG V ++I + P +F
Sbjct: 75 FLD-ILRLTSNTPGIERVAMTTHGARM------EKFAHQWKEAGLHQVNVSIDSLDPRQF 127
Query: 220 SE--------EAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + + +AG+ + SVLL +D
Sbjct: 128 AAITGQDKLKAVLRGLDAAIDAGLDVKVNSVLLNDFSDS 166
>gi|237748413|ref|ZP_04578893.1| molybdenum cofactor biosynthesis protein A [Oxalobacter formigenes
OXCC13]
gi|229379775|gb|EEO29866.1| molybdenum cofactor biosynthesis protein A [Oxalobacter formigenes
OXCC13]
Length = 372
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 14/122 (11%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
PI RQ E +P E + + L + D + + + C C +C
Sbjct: 9 PILRQ------ENPEMPVRPEIILPAMSIPVLDRLERPLKD-LRISVTDRCNFRCVYCMP 61
Query: 115 REMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH-KRLQKVLKT 168
+++ G +LS ++ + ++ TGG+PL+ + +RL + L
Sbjct: 62 KQVFGKDFRFIPHSDMLSFEEIARLARLFVA-RGVEKIRLTGGEPLLRKNVERLIEQLSR 120
Query: 169 LR 170
L+
Sbjct: 121 LK 122
>gi|229495505|ref|ZP_04389238.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas endodontalis ATCC 35406]
gi|229317488|gb|EEN83388.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas endodontalis ATCC 35406]
Length = 166
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 11/95 (11%)
Query: 87 KGIVH---RYPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
KG++H RY + I L C +C C E G LS + +
Sbjct: 10 KGMLHLLNRYKETISDGPGLRYAIYLAGCSHHCPGCHNPESHNPLGGIELSEEVLRGIID 69
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
I + + +GGDP + L K+++ L
Sbjct: 70 EINSNPLLDGITLSGGDPFFYPEELL-KLVQRLSQ 103
>gi|148548997|ref|YP_001269099.1| molybdenum cofactor synthesis domain-containing protein
[Pseudomonas putida F1]
gi|148513055|gb|ABQ79915.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida
F1]
Length = 322
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C LS+ +AY+ E + I + TGG+PL+
Sbjct: 17 LTAACNYACTYCVPDGKRLVAAQDELSADALARGVAYLIEAAGIERLRITGGEPLVSP-- 74
Query: 161 RLQKVLKTLRYIK 173
RL L + +
Sbjct: 75 RLDAFLAAVAKLD 87
>gi|306821367|ref|ZP_07454975.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304550585|gb|EFM38568.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 296
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 49/129 (37%), Gaps = 11/129 (8%)
Query: 87 KGIVHRYPDRILLK---LLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK- 141
+G+V+R P + C C FC M + + S KD + Y +
Sbjct: 4 EGMVYRPPSEAYSLIVQVTTGCSQNTCTFC---AMYKEARFKIRSLKDIKEDFLYAKAHY 60
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCL 200
I + GD LI+ + L ++LK + + ++ + ++ + + E ++ L
Sbjct: 61 RGIDRIFLADGDALIMPFEDLLEILKFIEELFPNLDRVSLYASPRSILSK--TKEQLETL 118
Query: 201 KEAGKPVYI 209
+ +
Sbjct: 119 RAHNLKLAY 127
>gi|290580122|ref|YP_003484514.1| putative coenzyme PQQ synthesis protein [Streptococcus mutans
NN2025]
gi|254997021|dbj|BAH87622.1| putative coenzyme PQQ synthesis protein [Streptococcus mutans
NN2025]
Length = 371
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 61/196 (31%), Gaps = 26/196 (13%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP + + + + C + C +C + K +S + ++ + V TGG
Sbjct: 7 YPLLVDVCVTNRCNLSCSYCSAEAGPFASKKGEMSVEKLDSIFRELNLMGVPR-VGVTGG 65
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFH-SRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+P I +L L+ ++H ++V + I + + L +
Sbjct: 66 EPFIRDD-----ILDILKAFD-----KYHFAKVLNTNGNLITDSVAKELSKLHLDRICVT 115
Query: 212 HANHPYEFSE---------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + +AI I L + + + L + DD L
Sbjct: 116 VDGSCSKVHDSQRGKGSFKKAIEGIKNLQRYNLPVSTLFTLGRHNVDDLINTIRLNDML- 174
Query: 263 ELRIKPYYLHHPDLAA 278
+ Y+ +
Sbjct: 175 ----RIKYMSVMIICP 186
>gi|157164712|ref|YP_001466755.1| hypothetical protein CCC13826_0085 [Campylobacter concisus 13826]
gi|157101465|gb|EAT97324.2| conserved hypothetical protein [Campylobacter concisus 13826]
Length = 412
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 14/139 (10%)
Query: 83 HSPLKGIVHRYPD--RILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALA 136
+S K IV Y + + +K+ C C +C R + + +L A
Sbjct: 117 NSVDKNIVTNYENHTKAFIKIQEGCNFNCSYCIIPSVRGKARSMDEAMILKEARILAQNG 176
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
Y + + G D ++ L K+L L I ++ +R S ++P +I+
Sbjct: 177 YNELVLTGTNIGSYGKD----TNSSLGKLLANLGKISGIRRIRLGS----IEPSQIDESF 228
Query: 197 IQCLKEAGKPVYIAIHANH 215
+ LKE ++ I H
Sbjct: 229 REILKEEWLERHLHIALQH 247
>gi|219668949|ref|YP_002459384.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
gi|219539209|gb|ACL20948.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
Length = 440
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 27/73 (36%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+ + + + +C C FCF + T +++ ++ + T
Sbjct: 85 QKGVGTVTMYVSLMCHRNCYFCFNPNQEDYEHFTHNKRDLVSELTQHLKHGPKLTHLALT 144
Query: 151 GGDPLILSHKRLQ 163
GG+PL+ + L
Sbjct: 145 GGEPLLHKKEMLD 157
>gi|88602761|ref|YP_502939.1| radical SAM family protein [Methanospirillum hungatei JF-1]
gi|88188223|gb|ABD41220.1| GTP cyclohydrolase subunit MoaA [Methanospirillum hungatei JF-1]
Length = 292
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 24/159 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C R T LS +D A L + I V FTGG+PL+
Sbjct: 18 VNSGCNLRCVYCHREGETKP--ETPLSLEDIRAILD-VAGNIGIRTVKFTGGEPLLRED- 73
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--HAN--HP 216
+++ +R + + ++ L L++AG N
Sbjct: 74 ----IVEIIRSVPPGIESSMTTNGTLL------GSLAHDLRDAGLARVNISLDSLNPETY 123
Query: 217 YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + + I +AG+ + VLLKGIN+
Sbjct: 124 KSITGTGLLSDVLEGIEAARDAGLTPIKINMVLLKGINE 162
>gi|78221524|ref|YP_383271.1| radical SAM:molybdenum cofactor synthesis-like [Geobacter
metallireducens GS-15]
gi|78192779|gb|ABB30546.1| GTP cyclohydrolase subunit MoaA [Geobacter metallireducens GS-15]
Length = 326
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 10/107 (9%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C E V G +LS ++ I ++ TGG+PL+
Sbjct: 18 VTDRCNLRCRYCMPAEGVEMLSHGEILSYEELSRIAR-AAVAIGIEKIRITGGEPLVR-- 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ + L + + ++ L + ++ PE+ L+ AG
Sbjct: 75 RGIVPFLAGIAALPGLRQLVLTTNGILL------PEMAADLRRAGVQ 115
>gi|24379898|ref|NP_721853.1| putative coenzyme PQQ synthesis protein [Streptococcus mutans
UA159]
gi|24377875|gb|AAN59159.1|AE014982_8 putative coenzyme PQQ synthesis protein [Streptococcus mutans
UA159]
Length = 371
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 61/196 (31%), Gaps = 26/196 (13%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP + + + + C + C +C + K +S + ++ + V TGG
Sbjct: 7 YPLLVDVCVTNRCNLSCSYCSAEAGPFASKKGEMSVEKLDSIFRELNLMGVPR-VGVTGG 65
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFH-SRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+P I +L L+ ++H ++V + I + + L +
Sbjct: 66 EPFIRDD-----ILDILKAFD-----KYHFAKVLNTNGNLITDSVAKELSKLHLDRICVT 115
Query: 212 HANHPYEFSE---------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + +AI I L + + + L + DD L
Sbjct: 116 VDGSCSKVHDSQRGKGSFKKAIEGIKNLQRYNLPVSTLFTLGRHNVDDLINTIRLNDML- 174
Query: 263 ELRIKPYYLHHPDLAA 278
+ Y+ +
Sbjct: 175 ----RIKYMSVMIICP 186
>gi|158422523|ref|YP_001523815.1| molybdenum cofactor biosynthesis protein A [Azorhizobium
caulinodans ORS 571]
gi|158329412|dbj|BAF86897.1| molybdenum cofactor biosynthesis protein A [Azorhizobium
caulinodans ORS 571]
Length = 399
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 17/160 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C M K +L+ ++ + + + + ++ TGG+PL+
Sbjct: 86 VTDRCDFRCVYCMSEHMTFLPKPDLLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRRDV 144
Query: 161 R-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYE 218
L + L H++ R + ++ L G K + ++I P +
Sbjct: 145 MTLFRSLSR-----HLETGRLEELTLTTNGSQL-ARFAGDLAACGVKRINVSIDTLDPDK 198
Query: 219 FSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
F + AGI + +V LK +N+
Sbjct: 199 FRAITRWGDLAKVLEGVKAAQRAGIHVKLNAVALKDVNEH 238
>gi|159040527|ref|YP_001539780.1| molybdenum cofactor biosynthesis protein A [Salinispora arenicola
CNS-205]
gi|157919362|gb|ABW00790.1| molybdenum cofactor biosynthesis protein A [Salinispora arenicola
CNS-205]
Length = 337
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 35/230 (15%), Positives = 77/230 (33%), Gaps = 17/230 (7%)
Query: 80 DNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAA 134
+ P G++ R+ + L C + C +C E + +L +
Sbjct: 1 MSAARPTAGLLVDRHGRVARSLRVSLTDKCNLRCTYCMPAEGLPWVAGPQLLDDDEVVRL 60
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS------RVPIVD 188
+ + + +V FTGG+PLI L ++ + + + + R+
Sbjct: 61 IRVAVRRLGVTDVRFTGGEPLIRP--GLVGIIAAVAAMTPRPRISLTTNGIGLDRLAPAL 118
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
+ L + ++ + + +VL++GIN
Sbjct: 119 HAAGLDRVNVSLDTLDRERFV--QLSRRDRLDAVLTGLTGAAQAGLAPIKINTVLMRGIN 176
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
DD L+R ++ + ++ L A R T+ +I+ +L+
Sbjct: 177 DD--EAPALLRFALDNHYQLRFIEQMPLDAQHGWDRSTMITADEILTALR 224
>gi|326801125|ref|YP_004318944.1| molybdenum cofactor biosynthesis protein A [Sphingobacterium sp.
21]
gi|326551889|gb|ADZ80274.1| molybdenum cofactor biosynthesis protein A [Sphingobacterium sp.
21]
Length = 326
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 67/233 (28%), Gaps = 48/233 (20%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK---S 142
IV RY L C + C +C E S T + + L I
Sbjct: 2 IVDRYNRVHDYLRISLTDRCNLRCFYCMPEE---SYDFTPMKHLMSATELEIIAGHFVRL 58
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQC 199
+ ++ TGG+P++ S ++ L + H+ +
Sbjct: 59 GVNKIRLTGGEPMVRSD--FGDIILRLAKLPVSLHITTNAI-----------LLDRYFDV 105
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRL----------------ANAGIILLSQSVL 243
L++A N + RL G + V+
Sbjct: 106 LRKAR-----IGTLN--ISLDTLSAEKFKRLTRRDKFDLTMRNIHMALQQGFQVKINMVV 158
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
++ N+D + L ++ + TS+ +++E +V S
Sbjct: 159 MRDFNEDEILDFVAWTKEESLDVRFIEFMPFEGNKWTSNQVFSLKEIVSLVES 211
>gi|315651497|ref|ZP_07904518.1| 2-methylthioadenine synthetase [Eubacterium saburreum DSM 3986]
gi|315486232|gb|EFU76593.1| 2-methylthioadenine synthetase [Eubacterium saburreum DSM 3986]
Length = 440
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 11/125 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQI-WEVIFTGG 152
LK+ C C +C + G+ + L + + A I+E + E G
Sbjct: 146 AYLKIAEGCNKNCTYCIIPSLRGNYRSYPLDDLIAQAKDLATQGIKELILVAQETTLYGV 205
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
D I K L K+LK L I+ ++ +R P+ I ELI + K Y+ I
Sbjct: 206 D--IYGKKTLPKLLKELAKIEGIEWIRI----LYCYPEEITDELIDVIASEDKVCKYLDI 259
Query: 212 HANHP 216
H
Sbjct: 260 PIQHA 264
>gi|163759697|ref|ZP_02166782.1| molybdenum cofactor biosynthesis protein A [Hoeflea phototrophica
DFL-43]
gi|162283294|gb|EDQ33580.1| molybdenum cofactor biosynthesis protein A [Hoeflea phototrophica
DFL-43]
Length = 345
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C M K +L+ ++ + L + + + ++ TGG+PL+ +
Sbjct: 32 VTDRCDFRCTYCMAENMTFLPKKDLLTLEELDR-LCTVFVEKGVRKIRLTGGEPLVRKN- 89
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVYIAI------ 211
+ ++++ L H+ R + R EL C V I
Sbjct: 90 -IMQLIRGLSR--HIDAGRMDEVTLTTNGSQLTRFASELYDC-GVRRINVSIDTLDPDKF 145
Query: 212 -HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + + ++ AG+ + +V LKG ND
Sbjct: 146 RQITRWGEL-AKVLDGVAAAQAAGLKIKINAVALKGFNDT 184
>gi|313904016|ref|ZP_07837396.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium cellulosolvens 6]
gi|313471165|gb|EFR66487.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium cellulosolvens 6]
Length = 453
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 53/148 (35%), Gaps = 20/148 (13%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P G+ G Y LK+ C +C +C +M G + +D
Sbjct: 131 PKGEKRRVMATGGFFEY-----LKIAEGCDRHCTYCAIPDMRGPY--RSVPMEDLLEEAR 183
Query: 137 YIQEKSQ------IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ E G D + + KRL +LK L I+ + +R P+
Sbjct: 184 GLAADGVKELILVAQETTLYGTD--LYNEKRLHILLKELCKIEDIHWIRV----LYCYPE 237
Query: 191 RINPELIQCLKEAGKP-VYIAIHANHPY 217
I PELIQ +KE K Y+ I H
Sbjct: 238 EIYPELIQTMKEEPKICHYMDIPIQHAN 265
>gi|303233841|ref|ZP_07320494.1| molybdenum cofactor biosynthesis protein A [Finegoldia magna
BVS033A4]
gi|302495036|gb|EFL54789.1| molybdenum cofactor biosynthesis protein A [Finegoldia magna
BVS033A4]
Length = 315
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 65/159 (40%), Gaps = 21/159 (13%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C++C E + +L+ +T + + I +V TGG+PL+ +
Sbjct: 16 VTDKCNLRCKYCMPEEGIAHLNHDEILTIDETLKIVEVFK-DLGIKKVRLTGGEPLVRN- 73
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA---GKPVYIAI-HANH 215
+ ++K ++ + ++ + + + ++ L++ + + H +
Sbjct: 74 -GILDLVKGIKDMG-IEEICMTTNAIKLY------DMADDLRKNGVDRFNISLDTLHVDK 125
Query: 216 PYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGIN 248
E + ++ + +I +L + + +V+++ N
Sbjct: 126 FREITRGGDLKKVLKSIDKLKQMDMKPIKINTVVMRHFN 164
>gi|95928890|ref|ZP_01311636.1| molybdenum cofactor synthesis-like [Desulfuromonas acetoxidans DSM
684]
gi|95135235|gb|EAT16888.1| molybdenum cofactor synthesis-like [Desulfuromonas acetoxidans DSM
684]
Length = 326
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C++C + V + + + ++ +A I ++ TGG+PL+ +
Sbjct: 18 VTDRCNLRCKYCMSEDGVAACQHNDILPYESLHLIAQAAVSMGIEKIRVTGGEPLVRN-- 75
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ L L I ++ L + ++ PE+ Q L +AG
Sbjct: 76 GIVPFLARLSAIDGLRHLAISTNGILL------PEMAQDLFQAGVQ 115
>gi|319957591|ref|YP_004168854.1| GTP cyclohydrolase subunit moaa [Nitratifractor salsuginis DSM
16511]
gi|319419995|gb|ADV47105.1| GTP cyclohydrolase subunit MoaA [Nitratifractor salsuginis DSM
16511]
Length = 322
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 43/251 (17%), Positives = 81/251 (32%), Gaps = 42/251 (16%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C C++C + + +LS +D + I + ++ TGG+PL+
Sbjct: 17 VTERCNFRCQYCMPEKPFSWVPQENLLSFEDLFKFIK-IAIDEGVSKIRLTGGEPLLRQD 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L + +K + K L + ++ P+ Q L++AG
Sbjct: 76 --LDRFVKMIHDYKPDIDLALTTNGYLL------PDTAQALRDAGLKRINI----SLDSL 123
Query: 220 SEEAI-------------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
I + G+ + V LKGIN D EIL L I
Sbjct: 124 KPAVAAQIAQKNVLGKVLEGIDKALEVGLGVKINMVPLKGIN-DAEILDILEYA-RARGI 181
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+ ++ + + A S + G++I+ +KE+ +
Sbjct: 182 RVRFIEYMENAHANS--EIEGMHGKEILERIKER---YTIRRLGREGA--------SPSY 228
Query: 327 IKKVGNGSYCI 337
K+ Y
Sbjct: 229 NYKIEENGYIF 239
>gi|291519359|emb|CBK74580.1| SSU ribosomal protein S12P methylthiotransferase [Butyrivibrio
fibrisolvens 16/4]
Length = 442
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 65/184 (35%), Gaps = 30/184 (16%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------- 150
LK+ C C +C + G + ++ + + + E+I
Sbjct: 148 YLKIAEGCNKRCTYCIIPYIRGDY--RSVPMEEILSEAKQLVAD-GVKEIILVAQETTVY 204
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYI 209
G D I + K L ++L L I ++ +R P+ I ELI+C+ K YI
Sbjct: 205 GMD--IYNKKSLPELLNKLCEIDGLEWIRI----LYAYPEEITDELIECMASQPKICHYI 258
Query: 210 AIHANHPY-EFS---------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ H E + + +RL A + ++ L+ G P + +
Sbjct: 259 DMPIQHCNDELLRKMGRKTNKADIMNIAARLREAMPDISLRTTLICGF---PGETEEMHQ 315
Query: 260 TFVE 263
++
Sbjct: 316 ELLQ 319
>gi|255011120|ref|ZP_05283246.1| putative anaerobic ribonucleoside-triphosphate reductase activating
protein [Bacteroides fragilis 3_1_12]
gi|313148931|ref|ZP_07811124.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides fragilis 3_1_12]
gi|313137698|gb|EFR55058.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides fragilis 3_1_12]
Length = 154
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
I++ YP+ I L C C C E Q G L+ K + + I
Sbjct: 2 NILYTYPETIVDGEGIRYSIYLAGCRHGCPGCHNPESWNPQAGDELTEKRLDCIIREINS 61
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDPL L
Sbjct: 62 NPLLDGVTFSGGDPLYNPEAFL 83
>gi|167033480|ref|YP_001668711.1| radical SAM domain-containing protein [Pseudomonas putida GB-1]
gi|166859968|gb|ABY98375.1| Radical SAM domain protein [Pseudomonas putida GB-1]
Length = 476
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 81/227 (35%), Gaps = 34/227 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTG 151
+ ++L + C + C +C++ ++ G +S+ EA++ + + + V+F G
Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTATAEASVEMLLKESPNEERYSVVFFG 161
Query: 152 GDPLI---LSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G+PL L + + K V+ + + + E+I L +
Sbjct: 162 GEPLSNRPLIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEEIIDWLNAHRFGL 215
Query: 208 YIAIHANHPYEF------------SEEAIAAISRL---ANAGIILLSQSVLLKGINDDPE 252
I + P + + + + L + ++ L +GI D
Sbjct: 216 SI--SIDGPKTVHDRNRITVGGQGTYDVVRRKADLLLSRYTSRPVGARVTLTRGITDVET 273
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
I +L + + D + F LT EE ++ A++K
Sbjct: 274 IWNHLFNEMGFAEVGFAPVTSGD----MADFNLTSEELVQVFANMKA 316
>gi|89894518|ref|YP_518005.1| hypothetical protein DSY1772 [Desulfitobacterium hafniense Y51]
gi|89333966|dbj|BAE83561.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 440
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 27/73 (36%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+ + + + +C C FCF + T +++ ++ + T
Sbjct: 85 QKGVGTVTMYVSLMCHRNCYFCFNPNQEDYEHFTHNKRDLVSELTQHLKHGPKLTHLALT 144
Query: 151 GGDPLILSHKRLQ 163
GG+PL+ + L
Sbjct: 145 GGEPLLHKKEMLD 157
>gi|299144166|ref|ZP_07037246.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518651|gb|EFI42390.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 435
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 48/117 (41%), Gaps = 15/117 (12%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG- 151
R +K+ C YC +C + + S+ E ++ + K+ E+I TG
Sbjct: 145 TRAYIKVQDGCNRYCTYC-----IIPFARGNIRSRSIEDSMNEARKLAKAGYKEIILTGI 199
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ +RL +++ + I ++ +R S ++P+ I + ++ + K
Sbjct: 200 HIGSYGYDIGKERLIDLIENIASIDGIERIRLSS----IEPRTITDDFMKRVVATNK 252
>gi|189219894|ref|YP_001940535.1| Molybdenum cofactor biosynthesis enzyme [Methylacidiphilum
infernorum V4]
gi|189186752|gb|ACD83937.1| Molybdenum cofactor biosynthesis enzyme [Methylacidiphilum
infernorum V4]
Length = 337
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 101 LLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C C +CF +++ S+K + LS ++ A + + K + TGG+PL+
Sbjct: 28 VTDRCNERCIYCFPQDLGFLSKKDSQLSFEELYAVVFHGAMKHGFRDFRITGGEPLVRK- 86
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ L + +R +
Sbjct: 87 GTLA-FIRRLTRTPGISSVRLSTNGT 111
>gi|78043523|ref|YP_360009.1| putative tRNA modifying protein [Carboxydothermus hydrogenoformans
Z-2901]
gi|123770593|sp|Q3ACX5|RIMO_CARHZ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|77995638|gb|ABB14537.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Carboxydothermus
hydrogenoformans Z-2901]
Length = 438
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 71/194 (36%), Gaps = 27/194 (13%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGDPL 155
+K+ C C +C + G + L I++ I E+I D
Sbjct: 143 YIKIADGCDNRCTYCTIPAIRGKYTSRP-----LDDILEEIKDTLKQGIKEIILVAQDTT 197
Query: 156 ILSHKRLQKV--LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIH 212
+ ++ LR I ++ F R+ + P +I PELI +KE K + Y+ +
Sbjct: 198 AYGIDLYGEFKLVELLRKIGSIK-GNFWVRLMYLYPDKITPELINEIKENPKVIKYVDVP 256
Query: 213 ANHPY-EF---------SEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMR-- 259
H + E SEE I+ + RL + ++ + G + E L+
Sbjct: 257 LQHIHPEILKKMGRKGSSEEIISTLERLRKEIPDITIRTTFIVGFPGETEEQFNYLLDFV 316
Query: 260 ---TFVELRIKPYY 270
F L PYY
Sbjct: 317 KKFKFNRLGAFPYY 330
>gi|303232268|ref|ZP_07318967.1| MiaB-like protein [Atopobium vaginae PB189-T1-4]
gi|302481678|gb|EFL44739.1| MiaB-like protein [Atopobium vaginae PB189-T1-4]
Length = 449
Score = 40.6 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 23/132 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTG 151
R +K+ C C FC + G S D + ++ ++ EV+ TG
Sbjct: 162 RTRPGIKVQDGCNNRCSFCIVWKARGPAC-----SADVDEIISQVRATQAHGAHEVVLTG 216
Query: 152 GDPLILSHKRLQKVLKTLR------YI---KHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ L R + LR I ++ +R S ++P I EL+ +
Sbjct: 217 ---INLGDYRYEYKGSRLRLPGLLSEIMKQTSIERIRLSS----IEPPDITDELLDVIAG 269
Query: 203 AGKPVYIAIHAN 214
+ + +H
Sbjct: 270 SEGRIAQFLHIC 281
>gi|224372437|ref|YP_002606809.1| molybdenum cofactor biosynthesis protein A [Nautilia profundicola
AmH]
gi|254811545|sp|B9L851|MOAA_NAUPA RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|223589159|gb|ACM92895.1| molybdenum cofactor biosynthesis protein A [Nautilia profundicola
AmH]
Length = 318
Score = 40.6 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 9/101 (8%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQ 143
++ ++ +I + C C +C + + E +++
Sbjct: 2 LIDKFERKIDYIRVSVTSRCNFRCLYCMPNTPFEWEPHENILR--YEEMFEFLRLAIDEG 59
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
I ++ TGG+PL+ L +K L + L +
Sbjct: 60 INKIRLTGGEPLLRKD--LDVFVKMLHDYRPDLDLALTTNG 98
>gi|167630037|ref|YP_001680536.1| elongator protein 3/miab/nifb, putative [Heliobacterium
modesticaldum Ice1]
gi|167592777|gb|ABZ84525.1| elongator protein 3/miab/nifb, putative [Heliobacterium
modesticaldum Ice1]
Length = 393
Score = 40.6 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 11/120 (9%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G V Y + + C ++C C+ G + + + +
Sbjct: 27 QRDGAVAGYGPVVAWNVSRTCNLHCIHCYSDSDEIEYPGELTTKEAIRFIDD--LADFNV 84
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
++ +GG+PL+ + L + +R + I P++ + +K+ G
Sbjct: 85 PVLLLSGGEPLMRPD------IFDLVAHATKRNIRVT---FSTNGTLITPDVAKEIKKYG 135
>gi|222054727|ref|YP_002537089.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. FRC-32]
gi|221564016|gb|ACM19988.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. FRC-32]
Length = 326
Score = 40.6 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C + + G +LS +D + I ++ TGG+PL+
Sbjct: 18 VTDRCNLRCSYCMPEQGIEKLCHGDILSYEDLVSVARQ-AVAIGIEKIRITGGEPLVRRD 76
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + LK L + ++ L +
Sbjct: 77 --IIRFLKELSAVPGLKQLVLTTNGL 100
>gi|313902299|ref|ZP_07835704.1| GTP cyclohydrolase subunit MoaA [Thermaerobacter subterraneus DSM
13965]
gi|313467450|gb|EFR62959.1| GTP cyclohydrolase subunit MoaA [Thermaerobacter subterraneus DSM
13965]
Length = 360
Score = 40.6 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C C +C ++ +L+ + E + + + ++ TGG+PL+
Sbjct: 49 LTDRCNFRCVYCMPEGDIPWIPTTEILTFAEIERVVRIVAGM-GVEKIRLTGGEPLLRP- 106
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
+++++ L + ++ + +
Sbjct: 107 -GVEELVARLVRVPGIRSVSMTTNGF 131
>gi|329961551|ref|ZP_08299632.1| radical SAM domain protein [Bacteroides fluxus YIT 12057]
gi|328531763|gb|EGF58592.1| radical SAM domain protein [Bacteroides fluxus YIT 12057]
Length = 458
Score = 40.6 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 77/231 (33%), Gaps = 36/231 (15%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY-IQEKSQ 143
P + D + L + H C + C++CF + + +V+S A+AY ++
Sbjct: 72 PSACCEKQKQDMLTLNVTHGCNMSCKYCFASTL--QDRKSVMSLSVVRKAIAYMLEGNPD 129
Query: 144 IWE--VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELI 197
+ F GG+PL+ + ++ + I +I+ ++ I+ +++
Sbjct: 130 SERYTIYFFGGEPLLHK-----QFVRDVVEIAKEEIISRRNKDVCFLLNTNGTLIDDDMM 184
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAI-------------AAISRLANAGIILLSQSVLL 244
+ V + + P + ++ I RL G+ L
Sbjct: 185 NFFVQEKFTVTV--SIDGPQKMNDANRVFLNGRGSFRRIVENIERLKKRGV----NFNLR 238
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPD---LAAGTSHFRLTIEEGQK 292
I+ L R F + + Y D T+HF +
Sbjct: 239 ATISPKNTRLLETFRFFESMEVPYSYAFTIDSDVKDRSTTHFDTNGIKAID 289
>gi|229084333|ref|ZP_04216614.1| Radical SAM domain protein [Bacillus cereus Rock3-44]
gi|228698990|gb|EEL51694.1| Radical SAM domain protein [Bacillus cereus Rock3-44]
Length = 468
Score = 40.6 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRR 115
R+ I EEL +R+ D S + +R Y + L + H C + C +CF
Sbjct: 63 RETIADIEELK---NDRQLFTEDEYKSLSIDLTNRKTYVKALCLNVAHTCNLSCEYCFAS 119
Query: 116 EMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTGGDPLI 156
+ + ++S + + A+ Y+ + ++ F GG+PL+
Sbjct: 120 QGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDFFGGEPLM 163
>gi|313683432|ref|YP_004061170.1| GTP cyclohydrolase subunit moaa [Sulfuricurvum kujiense DSM 16994]
gi|313156292|gb|ADR34970.1| GTP cyclohydrolase subunit MoaA [Sulfuricurvum kujiense DSM 16994]
Length = 321
Score = 40.6 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 9/102 (8%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQ 143
++ Y + + C C++C + L S E +I+
Sbjct: 2 LIDSYGRTVDYLRVSVTERCNFRCQYCMPEKPFSWVPKENLLS--FEELFEFIKVSIDEG 59
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
I ++ TGG+PL+ L +K + K+ L +
Sbjct: 60 IKKIRITGGEPLLRED--LDTFIKMIYDYKNDIDLAMTTNAF 99
>gi|325960236|ref|YP_004291702.1| molybdenum cofactor biosynthesis protein A [Methanobacterium sp.
AL-21]
gi|325331668|gb|ADZ10730.1| molybdenum cofactor biosynthesis protein A [Methanobacterium sp.
AL-21]
Length = 320
Score = 40.6 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 69/178 (38%), Gaps = 22/178 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ + C V C +C +V + ++ K+ E + + ++ I ++ +GG+PLI
Sbjct: 25 ITNRCNVKCFYCHHDGIV--PQDYEMTPKEIERIVT-VAKELGIEKIRLSGGEPLIRED- 80
Query: 161 RLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI------H 212
++ + I +V + + + +++ E + V
Sbjct: 81 ----IVDMVSKIANVGFRDISLTTNGILLEKY---AEKLHEAGLTRVNVSFDTLNPETYR 133
Query: 213 ANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
++ E A A I + +G+ + V++KGIND+ + ++ + E
Sbjct: 134 FITKRDYMENAKAGIQKAVESGLNPVKVNMVVMKGINDN--EIWDMFQFCRETGAILQ 189
>gi|291615125|ref|YP_003525282.1| molybdenum cofactor biosynthesis protein A [Sideroxydans
lithotrophicus ES-1]
gi|291585237|gb|ADE12895.1| molybdenum cofactor biosynthesis protein A [Sideroxydans
lithotrophicus ES-1]
Length = 369
Score = 40.6 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 72/191 (37%), Gaps = 27/191 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQK-----GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C + C +C RE+ +L+ ++ E + + + ++ TGG+PL
Sbjct: 48 VTDRCNLRCTYCMPREIFDESHTFLPRAELLTFEEIERVVRQFIK-LGVKKIRLTGGEPL 106
Query: 156 ILSHKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ + ++++++ L ++ + + L V R + LK AG
Sbjct: 107 LR--RGIERLIEKLAGLQTLTGEPLEIALTTNAVLLAR----KAKDLKTAGLSRVTV--- 157
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
+ A R+++ + + V+L+GI A + + ++
Sbjct: 158 ----SLDSLSDATFRRMSDTDVAVG---VVLEGIEA---AQAAGLGQLKINMVVKRGVNE 207
Query: 274 PDLAAGTSHFR 284
++ +HFR
Sbjct: 208 HEIVPMAAHFR 218
>gi|157363409|ref|YP_001470176.1| radical SAM domain-containing protein [Thermotoga lettingae TMO]
gi|157314013|gb|ABV33112.1| Radical SAM domain protein [Thermotoga lettingae TMO]
Length = 383
Score = 40.6 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 84/236 (35%), Gaps = 39/236 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----------AYIQEKSQIWEVI 148
+++ CP C +C V G + E+ + YI
Sbjct: 143 IEITRGCPFGCAYCE----VSLIGGKKPRHRSVESIVHHCKSGINKSRYIARFITP-NAF 197
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G D + ++ + + +L L+ + ++ + F S V P+ + E+++ +K+ Y
Sbjct: 198 GYGSDGMKVNVEAIDNLLYNLKKVG-MKEIYFGSFPSDVRPEFVTDEVLKTIKKYVNNRY 256
Query: 209 IAIHANHPYEFSEEAIAAISRL-------ANAGIILLS----QSVLLKGI----NDDPEI 253
I + S+ + I R +A I+L + + ++ G DD
Sbjct: 257 IILG---AQSGSDRVLRLIKRFHTVEHVVRSAEIVLNNGFVPRVDIIFGFPFENEDDLAK 313
Query: 254 LANLMRTFVELRIKPY-YLHHPDL---AAGTSHFRLTIEEGQKIVASLK-EKISGL 304
+L++ V++ K + + P + H L +++ + + G
Sbjct: 314 TFDLIKKLVKMGCKIHAHTFMPLPGTELESSGHAVLPEWVRRELSRFAQEGNLDGY 369
>gi|309811257|ref|ZP_07705048.1| molybdenum cofactor biosynthesis protein A [Dermacoccus sp.
Ellin185]
gi|308434797|gb|EFP58638.1| molybdenum cofactor biosynthesis protein A [Dermacoccus sp.
Ellin185]
Length = 362
Score = 40.6 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C + C +C E V L + D +A I ++ I E+ TGG+PL+
Sbjct: 50 LTDKCNLRCTYCMPAEGVPLAPRDTLLASDEIVTVARIAVEAGIDEIRLTGGEPLLRPD- 108
Query: 161 RLQKVLKTLRYIK 173
+ +++ L ++
Sbjct: 109 -IVDLVERLAALE 120
>gi|77460368|ref|YP_349875.1| molybdenum cofactor synthesis-like [Pseudomonas fluorescens Pf0-1]
gi|77384371|gb|ABA75884.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
fluorescens Pf0-1]
Length = 322
Score = 40.6 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + C C +C LS++ +AY+ E + I + T
Sbjct: 8 RRFRNLRISL-TSACNYACTYCVPNGKRLVAAQDELSAEAMARGVAYLIEAAGIERLRIT 66
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
GG+PL+ +L+ + + + ++ + +
Sbjct: 67 GGEPLVSP--KLESFMSAVGKMG-LEDISLTTNG 97
>gi|325845712|ref|ZP_08168995.1| molybdenum cofactor biosynthesis protein A [Turicibacter sp. HGF1]
gi|325488313|gb|EGC90739.1| molybdenum cofactor biosynthesis protein A [Turicibacter sp. HGF1]
Length = 323
Score = 40.6 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 79/238 (33%), Gaps = 32/238 (13%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C K + L+ + + I ++ TGG+PL+
Sbjct: 16 VTDQCNLRCVYCMEDTIQEFLPKCSKLTDDEMIRIVTACAR-LGIKKIRLTGGEPLVRP- 73
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-------- 211
+ +++K + I ++ + + ++ Q ++ L G
Sbjct: 74 -GIVELIKRIHDIDGIEEIYLTTNGTVLSDQ------VKTLAHHGLKGVNISLDSLKADR 126
Query: 212 -HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
H + I N G+ + VL+ G+N D + + + ++
Sbjct: 127 FHQITRRGILANVLKFIDECLNCGLKVKLNIVLVDGMNQDEILDFVRLTQEKPIDVRFIE 186
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKI--------SGLCQPFYILDLPGGYGKV 320
L P H +T EE +I+ S + G Y+ + G GKV
Sbjct: 187 L-MPIGVGKV-HKGVTNEEVLQIIRSSYSDVMEVEKVDKGGPA--TYVC-VNQGPGKV 239
>gi|256788568|ref|ZP_05526999.1| molybdenum cofactor biosynthesis protein A [Streptomyces lividans
TK24]
Length = 329
Score = 40.6 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 77/208 (37%), Gaps = 15/208 (7%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + K +L+ + + I EV FTGG+PL+
Sbjct: 17 LTDRCNLRCTYCMPEEGLQWLAKPDLLTDDEIVRLIDIAVTSLGIEEVRFTGGEPLLRP- 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHS------RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L +++ + ++ + + R + L V+ +
Sbjct: 76 -GLVGIVERVAALEPRPQMSLTTNGIGLRRTATALKAAGLDRVNVSLDTLRPDVFKTLTR 134
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+ ++ + ++ AG+ + SVL+ G+NDD +L+ VE + ++
Sbjct: 135 ---RDRHKDVLEGLAAAREAGLTPVKVNSVLMPGLNDD--EAPDLLAWAVEHDYELRFIE 189
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L A R + I+ SL+ +
Sbjct: 190 QMPLDAQHGWKREGMVTAGDILTSLRTR 217
>gi|254519873|ref|ZP_05131929.1| predicted protein [Clostridium sp. 7_2_43FAA]
gi|226913622|gb|EEH98823.1| predicted protein [Clostridium sp. 7_2_43FAA]
Length = 434
Score = 40.6 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 17/143 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + + SKD + L + + E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCTYC-----IIPYSRGSVCSKDPKKVLEEVNKLAEHGFKEIILSG 195
Query: 152 GDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L +++ + ++ ++ +R S P PE+I+ +K+ K
Sbjct: 196 IHTASYGLDLEGSVNLIDIIEEIEKVEGIERIRIGSIEPAF----FTPEVIEKIKKF-KK 250
Query: 207 VYIAIHANHPYEFSEEAIAAISR 229
+ H + R
Sbjct: 251 LCPHFHLSLQSGCDATLKRMNRR 273
>gi|221639656|ref|YP_002525918.1| molybdenum cofactor biosynthesis protein A [Rhodobacter sphaeroides
KD131]
gi|221160437|gb|ACM01417.1| Molybdenum cofactor biosynthesis protein A [Rhodobacter sphaeroides
KD131]
Length = 329
Score = 40.6 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 36/240 (15%), Positives = 75/240 (31%), Gaps = 32/240 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS-H 159
+ C C +C M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 15 VTDRCDFRCTYCMAEHMTFLPKAELLTLEELDRLCSAFVRM-GVQKLRVTGGEPLVRRGI 73
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHPYE 218
+ + ++ L + + R EL C V + A +
Sbjct: 74 MTFFRAMSRHLGTGALKELTLTTNGSQL--ARHADELAAC-GVRRVNVSLDTLDAERFAK 130
Query: 219 FS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH- 272
+ + + + AG+ + +V L+G N+D L R + + L
Sbjct: 131 VTRWGRLPQVLDGLRAARAAGLRVKINTVALRGFNED-----ELFRLVDWCGAEGHDLTF 185
Query: 273 --------HPDLAAGTSHFRLTIEEGQKIVA----SLKEKISGLCQPFYILDLPGGYGKV 320
+ ++ LT + L E+ G Y+ L K+
Sbjct: 186 IEVMPMGEMGEDTRLDQYWPLTELRARLAERFSLIELSERTGGPA--RYVR-LAETGQKI 242
>gi|110598241|ref|ZP_01386517.1| Radical SAM [Chlorobium ferrooxidans DSM 13031]
gi|110340156|gb|EAT58655.1| Radical SAM [Chlorobium ferrooxidans DSM 13031]
Length = 353
Score = 40.6 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 67/220 (30%), Gaps = 34/220 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + +L C + C C R G ++ LS+++ + + S + G
Sbjct: 9 PKNCVWELTLQCNMNCIHCGSRA--GHKRENELSNEEALRVVDELIALSCEYVTFIGGEI 66
Query: 154 PLILSHKRLQKVLKT------------LRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
L +++ + L L K V+ +R+ + + E ++
Sbjct: 67 FLYNGWEKIARKLSDGRVTVNLITNGFLFGDKQVEEVRYANLSNVALSIDGMEENHNRIR 126
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ RL I + + LL + + + L L
Sbjct: 127 NKSNSF-------------HRVRQTMDRLNKEHIPIGVNTTLL---DSNFDDLEELYHFL 170
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
+E + LA + + E+ I ++++
Sbjct: 171 LENNVL---TWQLQLANPMGNLSRSKEQMISI-ENIRKLT 206
>gi|322382440|ref|ZP_08056337.1| coenzyme PQQ synthesis-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321153584|gb|EFX45970.1| coenzyme PQQ synthesis-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 439
Score = 40.6 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
R+ I EEL E + N LK Y + L + H C + C +CF +
Sbjct: 34 RETIADIEELKNDGELFTEDEYKNLSMDLKN-RQTYVKALCLNVAHTCNLSCEYCFASQG 92
Query: 118 VGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTGGDPLI 156
+ ++S + + A+ Y+ + +V F GG+PL+
Sbjct: 93 KYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDVDFFGGEPLM 134
>gi|167628201|ref|YP_001678700.1| molybdenum cofactor biosynthesis protein a [Heliobacterium
modesticaldum Ice1]
gi|226704819|sp|B0TI16|MOAA_HELMI RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|167590941|gb|ABZ82689.1| molybdenum cofactor biosynthesis protein a [Heliobacterium
modesticaldum Ice1]
Length = 327
Score = 40.6 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 37/97 (38%), Gaps = 6/97 (6%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C + VL ++ E +A I I V TGG+PL+
Sbjct: 16 VTDRCNLRCIYCMPEAGLPLVDHREVLRFEEFERLIA-IAASQGIRRVRITGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
K + + ++ + ++ + + R EL
Sbjct: 73 KGIVPFVARVKTMTGIEDVALTTNGL--LLPRFASEL 107
>gi|167462543|ref|ZP_02327632.1| Radical SAM domain protein [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 422
Score = 40.6 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
R+ I EEL E + N LK Y + L + H C + C +CF +
Sbjct: 17 RETIADIEELKNDGELFTEDEYKNLSMDLKN-RQTYVKALCLNVAHTCNLSCEYCFASQG 75
Query: 118 VGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTGGDPLI 156
+ ++S + + A+ Y+ + +V F GG+PL+
Sbjct: 76 KYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDVDFFGGEPLM 117
>gi|227832886|ref|YP_002834593.1| molybdenum cofactor biosynthesis protein [Corynebacterium
aurimucosum ATCC 700975]
gi|227453902|gb|ACP32655.1| molybdenum cofactor biosynthesis protein [Corynebacterium
aurimucosum ATCC 700975]
Length = 379
Score = 40.6 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 39/219 (17%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E LS ++T + +K I +V FTGG+PL+
Sbjct: 59 LTDRCNLRCTYCMPAEGYEWLPTEHTLSDEETIRLIRLAVDKLGIQQVRFTGGEPLLRG- 117
Query: 160 KRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP-----------------QRINPELIQ 198
L+K++ + + + + + +D ++PEL
Sbjct: 118 -SLEKIIAATKALTTDEGRSPTVALTTNGLGLDKRLPGLQRAGLDRVNISLDTLDPELYA 176
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
L + + + + +V++ G+N+ + L
Sbjct: 177 RLTRRDRLADVLTSIEAALAADMD-------------PVKINAVIMPGVNESA--ILPLA 221
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
R +E + ++ L R + + I+A L
Sbjct: 222 RFCLERGAQLRFIEQMPLGPQEEWARSRMVTAEDILARL 260
>gi|871980|emb|CAA55583.1| molybdopterin cofactor synthesis protein [Arthrobacter
nicotinovorans]
Length = 374
Score = 40.6 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 11/115 (9%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRRE- 116
IPQ E P G+V RY R L L C + C +C E
Sbjct: 9 IPQPRE----GAGLSVPAA-RPAGAGVGLVDRYGRRATDMRLSLTDKCNLRCTYCMPAEG 63
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ K V+S+ + + + + E+ TGG+PL+ L ++ LR
Sbjct: 64 LEWLSKQAVMSASEIVRIVGIGVGRLGVRELRLTGGEPLVRHD--LVDIIAELRR 116
>gi|270295900|ref|ZP_06202100.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. D20]
gi|270273304|gb|EFA19166.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. D20]
Length = 438
Score = 40.3 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 15/168 (8%)
Query: 67 LNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
L + S R LK+ C YC +C G +
Sbjct: 120 LQKHETGEAYTSALKDIRSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTIPFARGRSRNGS 179
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++S E A E++ TG GD + + ++K L ++ ++ R S
Sbjct: 180 IASM-VEQASQ--AAAEGGKEIVLTGVNIGDFGKSTGETFFDLVKALDEVEGIERYRISS 236
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
++P + E+I+ + + + H + P S+E + + R
Sbjct: 237 ----IEPNLLTDEIIEYVSRSRR---FMPHFHIPLQSGSDEVLKLMRR 277
>gi|160890923|ref|ZP_02071926.1| hypothetical protein BACUNI_03368 [Bacteroides uniformis ATCC 8492]
gi|317479661|ref|ZP_07938785.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 4_1_36]
gi|156859922|gb|EDO53353.1| hypothetical protein BACUNI_03368 [Bacteroides uniformis ATCC 8492]
gi|316904162|gb|EFV25992.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 4_1_36]
Length = 438
Score = 40.3 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 15/168 (8%)
Query: 67 LNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
L + S R LK+ C YC +C G +
Sbjct: 120 LQKHETGEAYTSALKDIRSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTIPFARGRSRNGS 179
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++S E A E++ TG GD + + ++K L ++ ++ R S
Sbjct: 180 IASM-VEQASQ--AAAEGGKEIVLTGVNIGDFGKSTGETFFDLVKALDEVEGIERYRISS 236
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
++P + E+I+ + + + H + P S+E + + R
Sbjct: 237 ----IEPNLLTDEIIEYVSRSRR---FMPHFHIPLQSGSDEVLKLMRR 277
>gi|115379334|ref|ZP_01466442.1| CalU5 [Stigmatella aurantiaca DW4/3-1]
gi|310823525|ref|YP_003955883.1| hypothetical protein STAUR_6299 [Stigmatella aurantiaca DW4/3-1]
gi|115363648|gb|EAU62775.1| CalU5 [Stigmatella aurantiaca DW4/3-1]
gi|309396597|gb|ADO74056.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 292
Score = 40.3 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTG-GDPLILS 158
L C C +C + +++ D E LA+ + V FT G+ LI
Sbjct: 10 PLSSCNYGCEYCPFGKWKHTEEELAKDRADLERFLAWAESRTQDTLAVFFTPWGEALIWP 69
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ + L L ++ HV+ + + +
Sbjct: 70 WYQ--EALARLTHLPHVERVAVQTNLSCKL 97
>gi|313900907|ref|ZP_07834397.1| iron-only hydrogenase maturation rSAM protein HydG [Clostridium sp.
HGF2]
gi|312954327|gb|EFR36005.1| iron-only hydrogenase maturation rSAM protein HydG [Clostridium sp.
HGF2]
Length = 472
Score = 40.3 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 80/236 (33%), Gaps = 21/236 (8%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L E + + K I + Y +RI++ + C C +C
Sbjct: 49 THREAAVLLECDLPEENEKMFTLAKQIKQKLYGNRIVMFAPLYLSNYCVNGCVYCPYHYK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ L+ ++ + +Q+ + TG DP+ + + + +KT+ IKH
Sbjct: 109 NKHIRRKKLTQEEIRQEVIALQDMGHKRLALETGEDPVHSPIEYVLESIKTIYGIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQRINPE-----LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
++ + + VD R E I + K Y +H N P A+
Sbjct: 169 AIRRVNVNIAATTVDNYRKLKEAGIGTYILFQETYNKQSYEQLHPNGPKSNYAYHTEAMD 228
Query: 229 RLANAGI-ILLSQSVLLKGINDDPEILANLM----RTFVELRIKPYYLHHPDLAAG 279
R GI + +L G+N L+ + P+ + P +
Sbjct: 229 RAMEGGIDDVGC--GVLFGLNMYRYDFVGLLMHAEHLEAVHGVGPHTISVPRICPA 282
>gi|294674416|ref|YP_003575032.1| Fe-S oxidoreductase [Prevotella ruminicola 23]
gi|294471976|gb|ADE81365.1| putative Fe-S oxidoreductase [Prevotella ruminicola 23]
Length = 445
Score = 40.3 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y + + C + C CF R G L + L + V F+GG
Sbjct: 102 YRMLNIYL-TNACNLRCEHCFMRS--GKPLDNELPKTEWLRILTEF-QHQGGKSVTFSGG 157
Query: 153 DPLILSH 159
+PL+
Sbjct: 158 EPLMNRD 164
>gi|291459250|ref|ZP_06598640.1| radical SAM domain protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418504|gb|EFE92223.1| radical SAM domain protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 461
Score = 40.3 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + K ++S + + AL ++ E S EV F GG+PL
Sbjct: 101 LLVSHRCNLNCSYCFASQGSFCGKQGLMSFETGKRALDFLIENSGSRRNLEVDFFGGEPL 160
Query: 156 ILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ + + +K++ R I +H + RF + + E+I+ V +
Sbjct: 161 V-NFEVCRKLVSYARSIEKEHGKNFRFT---LTTNGVSVTDEVIEWANRECYNVVL 212
>gi|226324639|ref|ZP_03800157.1| hypothetical protein COPCOM_02424 [Coprococcus comes ATCC 27758]
gi|225207087|gb|EEG89441.1| hypothetical protein COPCOM_02424 [Coprococcus comes ATCC 27758]
Length = 441
Score = 40.3 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 26/133 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C G + +D + + E EV+ TG
Sbjct: 144 HTRAYLKVQDGCNQFCTYCIIPYARGRVRSR--KKEDVVEEVRTLAEHGY-QEVVLTG-- 198
Query: 154 PLILSHKRLQKV-------------LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+ LS L+ ++ + ++ ++ +R S ++P+ + E + L
Sbjct: 199 -IHLSSYGLEWKDENGKQTEGLLDLIRAVHGVEGIKRIRLGS----LEPRIVTEEFAKEL 253
Query: 201 KEAGKPVYIAIHA 213
K I H
Sbjct: 254 ACLPK---ICPHF 263
>gi|154503579|ref|ZP_02040639.1| hypothetical protein RUMGNA_01403 [Ruminococcus gnavus ATCC 29149]
gi|260589912|ref|ZP_05855825.1| putative elongator protein 3/MiaB/NifB [Blautia hansenii DSM 20583]
gi|153795679|gb|EDN78099.1| hypothetical protein RUMGNA_01403 [Ruminococcus gnavus ATCC 29149]
gi|260539719|gb|EEX20288.1| putative elongator protein 3/MiaB/NifB [Blautia hansenii DSM 20583]
Length = 426
Score = 40.3 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 15/175 (8%)
Query: 68 NILPEEREDPIGDNNHSPLKGIV--HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
+E+ P+ +K I H + + L + C + C FC +
Sbjct: 47 KPEFQEKLFPVWKQQTEFIKEIENNHEKINTVYLMVTRKCNMNCDFCAISANDKLRPEKE 106
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH--SR 183
+D + + +K++ ++I TGG+PLI ++++ + +++ S
Sbjct: 107 FKLEDIQNKVIPFFQKNKPHKMILTGGEPLIK-----DQIVEIAKALRNGLTCPITLQSN 161
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAI-HANHPYEFSEEAIAAISRLANAGIIL 237
I EL + LK + + H E ++ I I AGI +
Sbjct: 162 GLA-----ITRELTEQLKGYIDEIDFSTMHMFGTPEKEQQLINHIEMCQQAGIKV 211
>gi|149923413|ref|ZP_01911818.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
oxidoreductase [Plesiocystis pacifica SIR-1]
gi|149815720|gb|EDM75246.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
oxidoreductase [Plesiocystis pacifica SIR-1]
Length = 298
Score = 40.3 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 54/164 (32%), Gaps = 30/164 (18%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--------- 144
+L+++ C C +C + KD A I E +
Sbjct: 15 HSLLIQVTLGCSHNRCVYCD------MYRDKRFRPKDWGQVEADIIEAGAMGRRPGRRGF 68
Query: 145 --WEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+V GD LIL +RL ++L +R + V+ R S R + E + L+
Sbjct: 69 RSTKVFLCDGDALILPTRRLLQILAAIREHLPWVE--RVGSYGDTRSVGRKSVEELTALR 126
Query: 202 EAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGII 236
EAG + E E I +L AG+
Sbjct: 127 EAGLGIVYHGMETGDAEVLERIDKGGTRPELIETADKLRAAGVQ 170
>gi|329960232|ref|ZP_08298674.1| tRNA methylthiotransferase YqeV [Bacteroides fluxus YIT 12057]
gi|328532905|gb|EGF59682.1| tRNA methylthiotransferase YqeV [Bacteroides fluxus YIT 12057]
Length = 439
Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 14/153 (9%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ HS R LK+ C YC +C G + ++S E A
Sbjct: 135 DIHSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTIPFARGRSRNGSIAS-LVEQARQ--AA 191
Query: 141 KSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
E++ TG GD + + ++K L ++ ++ R S ++P + E+I
Sbjct: 192 AEGGREIVLTGVNIGDFGKTTGETFFDLVKALDEVEGIERYRISS----IEPNLLTEEII 247
Query: 198 QCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
+ + + + H + P S+E + + R
Sbjct: 248 EFVSRSKR---FMPHFHIPLQSGSDEVLKLMRR 277
>gi|301060145|ref|ZP_07201012.1| radical SAM domain protein [delta proteobacterium NaphS2]
gi|300445657|gb|EFK09555.1| radical SAM domain protein [delta proteobacterium NaphS2]
Length = 295
Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
Query: 97 ILLKLLHVCPVY-CRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
ILL++ C C FC + T+LS D A Y++ + +I G
Sbjct: 21 ILLQVTLGCSHNKCTFCGTYTDKRFTIKDDKTILS--DILFASKYMKRQDRI---FLMDG 75
Query: 153 DPLILSHKRLQKVLKTLRYIKHV-QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
D LI+ KRL +L +R H+ I R + + + E ++ L+E G +
Sbjct: 76 DALIIPQKRLMWILDRIRE--HLPWIKRVGAYANAKGIKMKSAEELKALRENGLSILYM 132
>gi|317051787|ref|YP_004112903.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5]
gi|316946871|gb|ADU66347.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5]
Length = 426
Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 19/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
+R+ LK+ C C +C G + + A + E+I TG
Sbjct: 136 DERVNLKIQDGCDNTCSYCLVTIARGPS--RSIKMEHVLETAAELA--HTFDEIILTGVH 191
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + L ++++ L I H+ LR S ++P I+ ++ L +
Sbjct: 192 IGSYGKD--LAEPSSLGRLMERLLEIPHLGRLRLSS----IEPAEIDETILGLL--SHPK 243
Query: 207 VYIAIHAN 214
+ +H +
Sbjct: 244 LCRHLHIS 251
>gi|328954329|ref|YP_004371663.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328454653|gb|AEB10482.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 511
Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 62/176 (35%), Gaps = 26/176 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + CR C+ +G L L QE + V+ +GG+PL+
Sbjct: 216 LMITERCNLRCRHCY----LGEVGEAELPLDAVLQTLQEFQEMQGLR-VLLSGGEPLMHR 270
Query: 159 -HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
+ L L S ++ ++I+ L+ + + +
Sbjct: 271 HWQELNNHLPEFE-----LRFVLLSNGLLL-----TDKVIEALRVHEVQLSLD-GLEPGH 319
Query: 218 EF------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+ ++ + + L +AG + +++ +G + LA + R + ++
Sbjct: 320 DLLRGPGTWKKTVDRMQALQSAGFEVSVATMIHRG---NVAELAEMSRWLQQAEVR 372
>gi|310828246|ref|YP_003960603.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium limosum
KIST612]
gi|308739980|gb|ADO37640.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium limosum
KIST612]
Length = 439
Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 53/137 (38%), Gaps = 18/137 (13%)
Query: 78 IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
I D++H ++ + +YP + + +++ C +C +C + S+ E +
Sbjct: 129 IWDDSHEIIEDLPVDRKYPFKSFVTIMNGCNNFCTYC-----IVPYTRGREVSRQPEKII 183
Query: 136 AYIQ--EKSQIWEVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ EV G + + +L+ L I+ ++ +RF
Sbjct: 184 EEVTRLADEGCLEVTLLGQNVNSYGNDLKTGYHFADLLRDLNQIEKIKRIRF----MTSH 239
Query: 189 PQRINPELIQCLKEAGK 205
P+ + E+I+ + + K
Sbjct: 240 PKDLTDEVIEAIAQCDK 256
>gi|225389655|ref|ZP_03759379.1| hypothetical protein CLOSTASPAR_03403 [Clostridium asparagiforme
DSM 15981]
gi|225044290|gb|EEG54536.1| hypothetical protein CLOSTASPAR_03403 [Clostridium asparagiforme
DSM 15981]
Length = 335
Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 25/216 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C + +LS ++ + I + TGG+PL+ K
Sbjct: 16 ITDRCNLRCRYCMPDGVEWLPMEDILSYEEIGRVCR-AAARLGIRHLKITGGEPLVR--K 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDP--QRINPELIQCLKEA-----GKPVYIAIHA 213
+++ +L+ I ++ + + +++ R+ + + + +
Sbjct: 73 GCPELIGSLKNIPGIEAVTITTNGILLEQHLDRLKLAGVDGINVSLDTLDRRQFADLTGF 132
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY--- 270
+ + ++ I R +AG + +V LK D + Y
Sbjct: 133 DRLDQ----VLSGIRRAVDAGFKVKVNAVSLKLDRDKDGSYG--WERL--AGLAREYPLD 184
Query: 271 --LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
F QK++ +++ +
Sbjct: 185 VRFIEMMPIGYGKQFETVDH--QKLLEQMRQVFPDM 218
>gi|325298763|ref|YP_004258680.1| Radical SAM domain-containing protein [Bacteroides salanitronis DSM
18170]
gi|324318316|gb|ADY36207.1| Radical SAM domain protein [Bacteroides salanitronis DSM 18170]
Length = 359
Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 6/95 (6%)
Query: 80 DNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
+ N ++ +P R L + C ++CR C + + +D L +
Sbjct: 14 EINRKLTDNLIKEHPLRQLFWECTLRCNLHCRHCGSDCKKIA-GYRDMPKEDFLRVLDNV 72
Query: 139 QEKSQIWEVI--FTGGDPLILSHKRLQKVLKTLRY 171
+ +V TGG+PL+ L+ + +
Sbjct: 73 ASHTDPHKVFIILTGGEPLVRED--LEACGRAIYE 105
>gi|262276946|ref|ZP_06054739.1| molybdenum cofactor biosynthesis protein A [alpha proteobacterium
HIMB114]
gi|262224049|gb|EEY74508.1| molybdenum cofactor biosynthesis protein A [alpha proteobacterium
HIMB114]
Length = 330
Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 65/191 (34%), Gaps = 12/191 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ VC C +C L+ + E + + + ++ TGG+P +
Sbjct: 20 ITDVCNFKCGYCLPNGYFKPNNHPGFLNIFEIENLINGL-SDLGVSKIRVTGGEPTVRKD 78
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
V+K ++ ++ L + ++ + + + +++ + E
Sbjct: 79 --FFDVMKLIKSKNGIKKLVVTTNG--YKLNQLTDKFLDAGIDGMNISIDSLNRSKFKEI 134
Query: 220 S-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
+ E + I L + G + +VLLK IND+ E + I Y+
Sbjct: 135 TGHDRLPEILEGIKILQDKGFKNIKINAVLLKNINDNQEEFDAWSEFINQNDISFRYIEL 194
Query: 274 PDLAAGTSHFR 284
+F+
Sbjct: 195 MQTGDNLDYFK 205
>gi|21220310|ref|NP_626089.1| molybdenum cofactor biosynthesis protein A [Streptomyces coelicolor
A3(2)]
gi|289772461|ref|ZP_06531839.1| molybdenum cofactor biosynthesis protein A [Streptomyces lividans
TK24]
gi|24212022|sp|Q9RJ47|MOAA_STRCO RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|6117864|emb|CAB59437.1| molybdenum cofactor biosynthesis protein A [Streptomyces coelicolor
A3(2)]
gi|289702660|gb|EFD70089.1| molybdenum cofactor biosynthesis protein A [Streptomyces lividans
TK24]
Length = 341
Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 77/208 (37%), Gaps = 15/208 (7%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + K +L+ + + I EV FTGG+PL+
Sbjct: 29 LTDRCNLRCTYCMPEEGLQWLAKPDLLTDDEIVRLIDIAVTSLGIEEVRFTGGEPLLRP- 87
Query: 160 KRLQKVLKTLRYIKHVQILRFHS------RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L +++ + ++ + + R + L V+ +
Sbjct: 88 -GLVGIVERVAALEPRPQMSLTTNGIGLRRTATALKAAGLDRVNVSLDTLRPDVFKTLTR 146
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+ ++ + ++ AG+ + SVL+ G+NDD +L+ VE + ++
Sbjct: 147 ---RDRHKDVLEGLAAAREAGLTPVKVNSVLMPGLNDD--EAPDLLAWAVEHDYELRFIE 201
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L A R + I+ SL+ +
Sbjct: 202 QMPLDAQHGWKREGMVTAGDILTSLRTR 229
>gi|331085298|ref|ZP_08334384.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|330408081|gb|EGG87571.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 440
Score = 40.3 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 11/125 (8%)
Query: 97 ILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152
LK+ C +C +C R S L + E A ++E + E G
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFRSVPMEQLVREAEELAEQGVKELILVAQETTLYGK 205
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI 211
D + K L K+LK L I ++ +R P+ I ELIQ +KE K Y+ +
Sbjct: 206 D--LYGEKSLHKLLKELCKIAGIRWIRV----LYCYPEEITDELIQVMKEESKICHYLDL 259
Query: 212 HANHP 216
H
Sbjct: 260 PIQHA 264
>gi|212697143|ref|ZP_03305271.1| hypothetical protein ANHYDRO_01709 [Anaerococcus hydrogenalis DSM
7454]
gi|212675918|gb|EEB35525.1| hypothetical protein ANHYDRO_01709 [Anaerococcus hydrogenalis DSM
7454]
Length = 166
Score = 40.3 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 85 PLKGIVHRY-----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
G + +Y P + C C+ CF +E + G + K T+ ++Y++
Sbjct: 1 MRYGQIRKYDVANGPGIRTSFFVTGCHANCKNCFNKEYMDPNFGNFWTEKQTQEVISYLK 60
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ +I + GG+P S + L K++K +R
Sbjct: 61 KD-EIEGLTILGGEPFE-STEDLIKIVKKIRE 90
>gi|116670001|ref|YP_830934.1| molybdenum cofactor biosynthesis protein A [Arthrobacter sp. FB24]
gi|116610110|gb|ABK02834.1| GTP cyclohydrolase subunit MoaA [Arthrobacter sp. FB24]
Length = 347
Score = 40.3 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 70/176 (39%), Gaps = 22/176 (12%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G++ RY R L L C + C +C E + K V+S+++ + +
Sbjct: 4 GLMDRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLAKQAVMSAEEIVRIVRIGVDMLG 63
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ E+ TGG+PL+ + L ++ LR + + + + LK A
Sbjct: 64 VRELRLTGGEPLVRAD--LLDIISALRQAHPELPISMTTNAVGL------DKKAAGLKAA 115
Query: 204 GK-PVYIAIHANHPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGIND 249
G + +++ + H F++ AG+ + +VL++GIND
Sbjct: 116 GLSRINVSLDSLHEETFTKLTRRPFLDKVLAGVDAAWAAGLGPVKLNAVLMRGIND 171
>gi|297568775|ref|YP_003690119.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296924690|gb|ADH85500.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 290
Score = 40.3 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 95 DRILLKLLHVCPVY-CRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D I+L++ C C FC +R E + ++ D + + +S+I
Sbjct: 16 DSIILQVTVGCSHNRCTFCGTYRAEKFRLKDEATIA-ADLAFVARHCRRQSRI---FLAD 71
Query: 152 GDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD LIL +RL+++L+ +R V+ +R ++ V + + EL + + VY+
Sbjct: 72 GDVLILPQERLRRLLQDIRQQAPWVKRVRLYANAKAVRHKSV-QELKELAELGLDRVYLG 130
Query: 211 IHANHPYEFSE-EAIAAISRLANAGIILL 238
+ + H + E + +++ +AG +
Sbjct: 131 LESGHDPTLTAIEKGSTAAQMIDAGQAVR 159
>gi|168181641|ref|ZP_02616305.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
gi|237796408|ref|YP_002863960.1| MiaB family RNA modification protein [Clostridium botulinum Ba4
str. 657]
gi|182675137|gb|EDT87098.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
gi|229261767|gb|ACQ52800.1| RNA modification enzyme, MiaB family [Clostridium botulinum Ba4
str. 657]
Length = 432
Score = 40.3 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 19/134 (14%)
Query: 93 YPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
Y D R LK+ C +C +C G+ + + + + E+I +
Sbjct: 138 YRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKP--EKIMEEVEKLSKH-GFKEIILS 194
Query: 151 GGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--- 202
G D L +L+ + ++ ++ +R S P E I + +
Sbjct: 195 GIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGSIDPTF----FTEEEIIGISKLKR 250
Query: 203 --AGKPVYIAIHAN 214
+ + N
Sbjct: 251 FCPHFHLSLQSGCN 264
>gi|317501694|ref|ZP_07959885.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088421|ref|ZP_08337336.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
3_1_46FAA]
gi|316896945|gb|EFV19025.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
8_1_57FAA]
gi|330408188|gb|EGG87676.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
3_1_46FAA]
Length = 431
Score = 40.3 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 29/144 (20%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ H G H R +K+ C +C +C + + S+ T+ L ++
Sbjct: 133 EELHLTKPG-DH---TRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRQTKDVLEEVR 183
Query: 140 --EKSQIWEVIFTGGDPLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ EV+ TG + LS + L ++K + ++ ++ +R S ++P
Sbjct: 184 DLAGNGYKEVVLTG---IHLSSYGIDFDGQRHLLDLIKEVHKVEGIERIRLGS----LEP 236
Query: 190 QRINPELIQCLKEAGKPVYIAIHA 213
I E + L E K + H
Sbjct: 237 GIITEEFAKELSEMPK---VCPHF 257
>gi|312876022|ref|ZP_07736011.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
lactoaceticus 6A]
gi|311797220|gb|EFR13560.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
lactoaceticus 6A]
Length = 434
Score = 40.3 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 75/228 (32%), Gaps = 23/228 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFT- 150
R +K+ C +C +C G+ + L ++ + ++ I + +
Sbjct: 141 HSRAFIKIEEGCDQFCSYCIIPYARGAVRSRGLKSIEEEVRRLVQKGYKEFVITGINISA 200
Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
G D + L V++ + I+ V+ +R S P++ L+ + +++
Sbjct: 201 YGKD--LDGKVTLIDVIERVNEIEGVKRIRLSSLEPVIMNDEFIERLLG-FDKLCHHLHL 257
Query: 210 AIHANHPYEF--------SEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRT 260
++ + + + + R+ + + ++ G + E +
Sbjct: 258 SLQSGSDKILKLMNRHYTTAQYQGIVDRIREKWEDVAFTTDIIVGFPGETEEDFNATLEF 317
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLT-------IEEGQKIVASLKEKI 301
++ ++ GT + + E KI+ + +
Sbjct: 318 VQKIGFSRIHVFRFSPKKGTKAYEMPNQVDSKEKERRSKIMKEVAANL 365
>gi|297545376|ref|YP_003677678.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296843151|gb|ADH61667.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 453
Score = 40.3 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 78/220 (35%), Gaps = 33/220 (15%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA----YIQEKSQIWEVIFT 150
D I L L + C + C +C+ E + +S E + +I E+ I +IF
Sbjct: 68 DMIELHLTYGCNMNCPYCYIPES-YRRNYQKMSYNQLEEIIDKLSKWINERGGIKRIIFH 126
Query: 151 GGDPLILSH---KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GG+PL+ ++K K + + ++ E +K+ V
Sbjct: 127 GGEPLLAKEIFFPIIEKYYKEIE-------FGIQTNGTLL-----TEEDAAFIKKHNVHV 174
Query: 208 YIAIHANHPYEFSEEAIAA------ISRLANAGIILLS----QSVLLKGINDDPEILANL 257
+++ A P E +++ + + I + Q V++ ++ I+ +
Sbjct: 175 SLSLDAPLP-EINDKLRYYQNGTGTFAHVRKT-IEMFDDYEWQGVIVTITKNNVNIIDTM 232
Query: 258 MRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEGQKIVAS 296
+ ++ + + ++ F +I+E
Sbjct: 233 AEALYDWGVRSALFNPISPSVSESTAFVPSIKELIDNYKK 272
>gi|302874325|ref|YP_003842958.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans
743B]
gi|307689408|ref|ZP_07631854.1| RNA modification enzyme, MiaB family protein [Clostridium
cellulovorans 743B]
gi|302577182|gb|ADL51194.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans
743B]
Length = 433
Score = 40.3 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SK+ E + + + E+I +G
Sbjct: 141 KTRAFLKVQDGCNRFCSYCL-----IPYARGAVCSKNPETIIDEVNKLADNGFKEIILSG 195
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L +++ + I ++ +R S V+P+ E+I+ + K
Sbjct: 196 IHIASYGVDLEERKTLMDIIEEIHKINGIKRIRIGS----VEPRFFTDEVIEKMASMEK- 250
Query: 207 VYIAIHA 213
+ H
Sbjct: 251 --MCPHF 255
>gi|256397055|ref|YP_003118619.1| radical SAM domain-containing protein [Catenulispora acidiphila DSM
44928]
gi|256363281|gb|ACU76778.1| Radical SAM domain protein [Catenulispora acidiphila DSM 44928]
Length = 794
Score = 40.3 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 21/126 (16%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWEV-----IF 149
+LK+ C + C C+ E + K ++ + I E + + +
Sbjct: 11 VLKVATRCDLACDHCYVYEAADTSWRHKPRFMTDEIVRRTAERIAEHATAHRLPAVALVL 70
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQI------LRFHSRVPIVDPQRINPELIQCLKEA 203
GG+PL+L R++ L TLR + ++ LR H+ R+ E +E
Sbjct: 71 HGGEPLLLGPTRMRATLTTLRDV--IESAGCAVDLRIHTNGV-----RLTSEYCDLFREH 123
Query: 204 GKPVYI 209
V +
Sbjct: 124 RVRVGV 129
>gi|242277914|ref|YP_002990043.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio
salexigens DSM 2638]
gi|242120808|gb|ACS78504.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio
salexigens DSM 2638]
Length = 423
Score = 40.3 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 83/230 (36%), Gaps = 29/230 (12%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAY----IQEKSQIWEVI 148
R+ L + C + C +C R+ ++ ++S + A Y ++++ +I
Sbjct: 20 GRVHLPVAPKCNIQCNYCNRKYDCVNESRPGVTSSVLKPFQAAEYMDAVLEKEPRITVAG 79
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------------- 190
G GDP + L+ + + H+ S + P
Sbjct: 80 IAGPGDPFANPEETLETMRLLNKKHPHLIFC-LSSNGMGILPYLDELKELGVSHVTITIS 138
Query: 191 RINPELIQCLKEAGKPVYIAIHANH-PYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
I+P++ + K + H E +AAI L GI + S+++ GIN+
Sbjct: 139 AIDPKIGAKIYSWVKDGKVVYHGEKGAKVLLERQLAAIKGLKERGITVKINSIVIPGINE 198
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
+A + + +L + A T F IE G + + L++
Sbjct: 199 HH--IAEVSKVCADLGADIQNMIPLKPTADTP-FADIIEPGHETIGPLRK 245
>gi|323484393|ref|ZP_08089760.1| molybdenum cofactor biosynthesis protein A [Clostridium symbiosum
WAL-14163]
gi|323402387|gb|EGA94718.1| molybdenum cofactor biosynthesis protein A [Clostridium symbiosum
WAL-14163]
Length = 324
Score = 40.3 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 20/157 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C + +L+S++ A I + TGG+PL+ +
Sbjct: 18 VTDRCNLNCAYCRPENSPFLSRKALLTSEEILAFCRE-AAILGIRHIKITGGEPLLRTDC 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+++ L+ ++ + + ++ + LKEAG I I + P
Sbjct: 77 C--SIVEKLKKTSGIETVTLTTNGLLLREH------LGRLKEAGID-GINISMDTPDRAC 127
Query: 221 EEAIAAISRL----------ANAGIILLSQSVLLKGI 247
A+ RL A GI + V++ G+
Sbjct: 128 YAALTGSDRLPELLDSIRSTAGLGIPMKINCVIMDGL 164
>gi|228470224|ref|ZP_04055131.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas uenonis 60-3]
gi|228308175|gb|EEK17038.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas uenonis 60-3]
Length = 156
Score = 40.3 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C +C C E GT L+ + + + I + + + +GGDP + S L
Sbjct: 25 GCSHHCPGCHNPESHSPLVGTPLTEEYLQQIIDEINDNPLLDGITLSGGDP-MFSPGELL 83
Query: 164 KVLKTLR 170
+LK L+
Sbjct: 84 TLLKRLK 90
>gi|153815340|ref|ZP_01968008.1| hypothetical protein RUMTOR_01574 [Ruminococcus torques ATCC 27756]
gi|145847402|gb|EDK24320.1| hypothetical protein RUMTOR_01574 [Ruminococcus torques ATCC 27756]
Length = 442
Score = 40.3 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 29/144 (20%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ H G H R +K+ C +C +C + + S+ T+ L ++
Sbjct: 144 EELHLTKPG-DH---TRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRQTKDVLEEVR 194
Query: 140 --EKSQIWEVIFTGGDPLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ EV+ TG + LS + L ++K + ++ ++ +R S ++P
Sbjct: 195 DLAGNGYKEVVLTG---IHLSSYGIDFDGQRHLLDLIKEVHKVEGIERIRLGS----LEP 247
Query: 190 QRINPELIQCLKEAGKPVYIAIHA 213
I E + L E K + H
Sbjct: 248 GIITEEFAKELSEMPK---VCPHF 268
>gi|254561814|ref|YP_003068909.1| molybdenum biosynthetic protein A [Methylobacterium extorquens DM4]
gi|254269092|emb|CAX25055.1| molybdenum biosynthetic protein A [Methylobacterium extorquens DM4]
Length = 344
Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 55/167 (32%), Gaps = 15/167 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
+ C C +C +M K +L+ ++ + + ++ TGG+PL+
Sbjct: 32 VTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRRDI 90
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L + L + L + + R PEL + L V + P +F
Sbjct: 91 MHLFRRLSRHLKSGTLDELTLTTNGSQL--ARFAPELAE-LGVRRINVSLDT--LDPDKF 145
Query: 220 SEEAIA--------AISRLANAGIILLSQSVLLKGINDDPEILANLM 258
I GI + +V LKG+N+D
Sbjct: 146 RAITRRGDLSVVLAGIEAARAEGIKVKINAVALKGVNEDEIADMIAW 192
>gi|261414864|ref|YP_003248547.1| RNA modification enzyme, MiaB family [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261371320|gb|ACX74065.1| RNA modification enzyme, MiaB family [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302326764|gb|ADL25965.1| tRNA-i(6)A37 modification enzyme MiaB [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 440
Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 49/152 (32%), Gaps = 19/152 (12%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLS 127
+ I ++ G + + + + C C +C + G +K
Sbjct: 122 HKTHHKMFIDEDRDENYLGEYAKLQNDVSAFVAIQRGCNKRCSYCIVPYLRGPEKY---- 177
Query: 128 SKDTEAALAYIQ--EKSQIWEVIFTGG--DPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+D + L ++ I EV+ G + + +L + I ++ +RF S
Sbjct: 178 -RDMDDVLTEVKRAADKGITEVMLLGQTVNAYKTPNADFTTLLTKVSEIGGIKRIRFTSP 236
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
P+ ELI L K H H
Sbjct: 237 ----HPRHYTNELIDVLLNNPK----VCHYAH 260
>gi|326402367|ref|YP_004282448.1| hypothetical protein ACMV_02190 [Acidiphilium multivorum AIU301]
gi|325049228|dbj|BAJ79566.1| hypothetical protein ACMV_02190 [Acidiphilium multivorum AIU301]
Length = 579
Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 15/160 (9%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E P + L+G+ + + +C + C C+
Sbjct: 270 ILPHAERAATATRLECAPAA-DATVALEGL-----ETLWFNTGTLCNLACEGCYIESSPR 323
Query: 120 SQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + L L ++ E+ TGG+P + ++ L + +
Sbjct: 324 NDRLAWLRLDGFRRVLDEAANRHPELREIGLTGGEPFMNPD------IEALIGMALDRGY 377
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
R + P R + G+ +++ + +H E
Sbjct: 378 RVLVLTNAMTPMR--HHMAAISGWRGRDLHLRVSLDHHTE 415
>gi|303241628|ref|ZP_07328127.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus
CD2]
gi|302590848|gb|EFL60597.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus
CD2]
Length = 438
Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 18/132 (13%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEV 147
V++ R +K+ C +C +C + + S+ E L ++ + E+
Sbjct: 138 VYKERTRAFIKIQEGCSQFCSYC-----IIPYARGPIRSRPVEYVLDEVRKLALNGYKEI 192
Query: 148 IFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+ TG D + L ++K + I V+ +R S P E I L
Sbjct: 193 VLTGIHIASYGKD---IKTTSLIDIIKKVHEIDGVERVRLGSIEPTTITHEFVNE-IGKL 248
Query: 201 KEAGKPVYIAIH 212
++ +I++
Sbjct: 249 EKVCPHFHISLQ 260
>gi|256825609|ref|YP_003149569.1| MiaB-like tRNA modifying enzyme YliG [Kytococcus sedentarius DSM
20547]
gi|256689002|gb|ACV06804.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Kytococcus
sedentarius DSM 20547]
Length = 526
Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 58/178 (32%), Gaps = 27/178 (15%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
+ P + P I R D+ LK+ C C FC G+
Sbjct: 190 PVEPADARLDAPAPASGPSTIIRRRLNDKPWAPLKIASGCDRRCSFCAIPAFRGAYLSRR 249
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFT-------GGDPLILSH-KRLQKVLKTLRYIKHVQI 177
+ D A ++ E + EV G D L + L +L L I ++
Sbjct: 250 PT--DVLAEAHWLAEN-GVKEVFLVSENTTSYGKD---LGDLRLLDTMLPELAAIDGIER 303
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISRLANAG 234
+R + P + PEL++ + E V Y + H + + R+ G
Sbjct: 304 VRV----SYLQPAEMRPELLRAMVETPGVVPYFDLSFQHA------SGPLLRRMRRFG 351
>gi|87307866|ref|ZP_01090009.1| astB/chuR-related protein [Blastopirellula marina DSM 3645]
gi|87289480|gb|EAQ81371.1| astB/chuR-related protein [Blastopirellula marina DSM 3645]
Length = 355
Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 14/174 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L + H C + C +C+ E + K + A+ ++ + E+ F GG+PLI
Sbjct: 7 LTLVVNHACNLRCTYCYTGEKIRRPMSPETGRKAIDRAIRSVRRDGTL-ELSFFGGEPLI 65
Query: 157 LSHKRLQ--KVLKTLRYIKHVQI-LRFHSRVPI----VDPQRINPELIQCLKEAGKPVYI 209
+ L + ++ + V++ L + I P+L + G P
Sbjct: 66 EAELILDLVRYARSAADEQDVRLALSMTTNGTIESAAAWSVMTLPQLELAISHDGLPSAH 125
Query: 210 AIHANHPYEF--SEEAIAAISRLANAG----IILLSQSVLLKGINDDPEILANL 257
H S ++RL +AG I+++ Q + + D E L L
Sbjct: 126 DGHRVTVDGLPSSFRVQNTMARLIDAGKEFRIVMVVQPDSVASLPDGMEFLYTL 179
>gi|145219616|ref|YP_001130325.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Prosthecochloris vibrioformis DSM 265]
gi|145205780|gb|ABP36823.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Chlorobium phaeovibrioides DSM 265]
Length = 232
Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGD 153
+ C C +C E+V + + LA I + ++ + V+ TGG+
Sbjct: 23 HIAAVMYTSGCNFRCPYCHNPELVLPDEFGSTPLLSFDEVLARITRNRNLLGGVVVTGGE 82
Query: 154 PLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPI---VDPQRINPELIQCLKEA--GKPV 207
P I H+ L + L+TL+ + V++ SR + + +R+ E+ +K +P
Sbjct: 83 PTI--HQSLPEALRTLKGLGLKVKLDTNGSRPEMLGQILDERLVDEVAMDVKAPLESEPY 140
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
E + +I L +GI + L+KG++ +++
Sbjct: 141 SRLAGIRCSSELIGKVRDSILLLRRSGISHRFRCTLVKGLHATEDVV 187
>gi|269126500|ref|YP_003299870.1| molybdenum cofactor biosynthesis protein A [Thermomonospora curvata
DSM 43183]
gi|268311458|gb|ACY97832.1| molybdenum cofactor biosynthesis protein A [Thermomonospora curvata
DSM 43183]
Length = 329
Score = 40.3 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 83/208 (39%), Gaps = 17/208 (8%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + K +L+ + +A + I EV +TGG+PL+
Sbjct: 17 LTDRCNLRCTYCMPPEGLPWLPKPQLLTDDEVVRLVAIGVRRLGITEVRYTGGEPLLR-- 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-------H 212
+ L ++++ ++ + + + +R+ P L + V +
Sbjct: 75 RGLVEIVRRTAELRPRPQISLTTNGIGL--RRLAPALAEA-GLDRVNVSLDTLDAGLFRR 131
Query: 213 ANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H + +A + AG+ + +VL++G+ND + L+R +E + ++
Sbjct: 132 LAHRDRL-ADVLAGLEAAHRAGLHPVKVNAVLMRGVNDHEAV--PLLRFCLERGYQLRFI 188
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKE 299
L A R + ++I+A L
Sbjct: 189 EQMPLDAQHGWRRAQMVTAEEILAELSR 216
>gi|169350747|ref|ZP_02867685.1| hypothetical protein CLOSPI_01520 [Clostridium spiroforme DSM 1552]
gi|169292610|gb|EDS74743.1| hypothetical protein CLOSPI_01520 [Clostridium spiroforme DSM 1552]
Length = 461
Score = 40.3 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 78/243 (32%), Gaps = 34/243 (13%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
Q EL + D ++ LK + L + H C + C +CF + +
Sbjct: 68 QITELKDAGKLFADDTFESMAGTLKEKTSGVVKALCLHVAHTCNLNCSYCFASQGKYKGE 127
Query: 123 GTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ--- 176
++S + + AL ++ E S EV F GG+PL ++ + ++ ++ R I+ +
Sbjct: 128 RALMSFEVGKQALDFLVENSGTRHNLEVDFFGGEPL-MNFQVVKDLVAYARSIEKEKNKN 186
Query: 177 -ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
+ + I+ E+I+ V + + E + AG
Sbjct: 187 FRFTLTTNGML-----IDDEVIEFANRECSNVVL--SLDGRKEIHDRYRVDY-----AG- 233
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI-V 294
E + + VE R Y F ++ +
Sbjct: 234 ------------KGSWEKIVPKFQKLVEARGGKDYYMRGTFTHANPDFLKDVQTMLDLGF 281
Query: 295 ASL 297
L
Sbjct: 282 REL 284
>gi|25169122|emb|CAD47958.1| molybdopterin cofactor synthesis protein moaA [Arthrobacter
nicotinovorans]
Length = 371
Score = 40.3 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 11/115 (9%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRRE- 116
IPQ E P G+V RY R L L C + C +C E
Sbjct: 7 IPQPRE----GAGLSVPAA-RPAGAGVGLVDRYGRRATDMRLSLTDKCNLRCTYCMPAEG 61
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ K V+S+ + + + + E+ TGG+PL+ L ++ LR
Sbjct: 62 LEWLSKQAVMSASEIVRIVGIGVGRLGVRELRLTGGEPLVRHD--LVDIIAELRR 114
>gi|219667457|ref|YP_002457892.1| molybdenum cofactor biosynthesis protein A [Desulfitobacterium
hafniense DCB-2]
gi|219537717|gb|ACL19456.1| molybdenum cofactor biosynthesis protein A [Desulfitobacterium
hafniense DCB-2]
Length = 323
Score = 40.3 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 7/101 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQI 144
+ +Y +I + C + C++C E V +L+ ++ + I
Sbjct: 1 MQDQYRRQIEYLRISITDRCNLRCKYCMPAEGVQWIPHERILTYEEILRVMR-ISTTLGF 59
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI S L+ L+ I V+ L +
Sbjct: 60 RRFRITGGEPLIRS-GVLE-FLQNASQIPGVEDLMLTTNGI 98
>gi|255282411|ref|ZP_05346966.1| MiaB protein [Bryantella formatexigens DSM 14469]
gi|255266995|gb|EET60200.1| MiaB protein [Bryantella formatexigens DSM 14469]
Length = 454
Score = 40.3 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 52/130 (40%), Gaps = 25/130 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S++ LA + ++ EV+ TG
Sbjct: 173 HTRAYIKVQDGCNQFCSYC-----IIPYARGRIRSRELADVLAEVSTLAENGYQEVVLTG 227
Query: 152 GDPLILSHKR--------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ LS L ++++ + ++ ++ +R S ++P+ I E + L E
Sbjct: 228 ---IHLSSYGKEKDDGIGLLQLIEAVHEVEGIRRIRLGS----LEPRIITEEFAERLSEL 280
Query: 204 GKPVYIAIHA 213
K I H
Sbjct: 281 PK---ICPHF 287
>gi|134300107|ref|YP_001113603.1| molybdenum cofactor biosynthesis protein A [Desulfotomaculum
reducens MI-1]
gi|172044320|sp|A4J6S5|MOAA_DESRM RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|134052807|gb|ABO50778.1| GTP cyclohydrolase subunit MoaA [Desulfotomaculum reducens MI-1]
Length = 325
Score = 40.3 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 12/106 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E V +LS ++ + I ++ TGG+PL+ +
Sbjct: 16 VTDRCNLRCVYCMPPEGVKQTPHSEILSLEEFARVVD-AASDIGIRKIRITGGEPLVRKN 74
Query: 160 K-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L + + T I + + + E+ LK+AG
Sbjct: 75 IVNLFEKISTNSAIDDIS---LTTNGVLF------AEMASDLKKAG 111
>gi|295101447|emb|CBK98992.1| SSU ribosomal protein S12P methylthiotransferase [Faecalibacterium
prausnitzii L2-6]
Length = 441
Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 17/129 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154
LK+ C C +C + G L S++ +A + + E+I DP
Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGP-----LRSREMADCVAEARWLAGEGVKELIIVAQDP 200
Query: 155 LILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-Y 208
+ ++L L I ++ +R P+RI + I +K K + Y
Sbjct: 201 TAYGEDWGKPGSICELLDKLNKIPGLEWIRI----MYAYPERITDDFIAAMKRNEKVLPY 256
Query: 209 IAIHANHPY 217
+ + H
Sbjct: 257 LDLPIQHCN 265
>gi|294340360|emb|CAZ88741.1| Molybdenum cofactor biosynthesis protein A (Protein narA)
[Thiomonas sp. 3As]
Length = 378
Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 12/89 (13%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIW 145
HR + + + C C +C +E+ +LS ++ A I +
Sbjct: 36 HRPLHDLRISVTDRCNFRCTYCMPKEIFDKHYEFLSHADLLSFEEITRAAR-IFMSLGVR 94
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
++ TGG+PL L+K L+ L + H
Sbjct: 95 KIRLTGGEPL------LRKNLERLVEMLH 117
>gi|224368537|ref|YP_002602700.1| MoaA1 [Desulfobacterium autotrophicum HRM2]
gi|223691253|gb|ACN14536.1| MoaA1 [Desulfobacterium autotrophicum HRM2]
Length = 329
Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
HR+ + + + + C + C +C +L+ ++ + K I +V
Sbjct: 9 YHRHLNYLRVSITDRCNLRCLYCIPDGIFPMLSHEEILTYEEILRIVKT-GSKMGISKVR 67
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
TGG+PL+ L L IK + + + +++
Sbjct: 68 ITGGEPLVRKGAC--DFLSRLSKIKGLLDISLTTNGVLLEKN 107
>gi|154482681|ref|ZP_02025129.1| hypothetical protein EUBVEN_00357 [Eubacterium ventriosum ATCC
27560]
gi|149736457|gb|EDM52343.1| hypothetical protein EUBVEN_00357 [Eubacterium ventriosum ATCC
27560]
Length = 444
Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF E + ++S + + AL ++ S EV F GG+PL
Sbjct: 85 LHIAHDCNLACKYCFAEEGEYHGRRAMMSFEVGKKALDFLVANSGSRVNLEVDFFGGEPL 144
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ K+L + ++L H + RF + +N E+++ L + V +
Sbjct: 145 MNWDVVKQLVEYGRSLEESNH-KKFRFT---LTTNGVLLNDEIMEYLNKEMSNVVL 196
>gi|320533678|ref|ZP_08034299.1| molybdenum cofactor biosynthesis protein A [Actinomyces sp. oral
taxon 171 str. F0337]
gi|320134109|gb|EFW26436.1| molybdenum cofactor biosynthesis protein A [Actinomyces sp. oral
taxon 171 str. F0337]
Length = 409
Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 21/161 (13%)
Query: 19 LIKKEQ--IDEIKEISNHYSIALTPVIA-NLINPHNPNDPIARQFIPQKEELNILPEERE 75
+ E I+ S + T + L P+ P+ E P
Sbjct: 5 PLDAEVVGRSRIRGTSADLPVPATRSVLPELSGRPGPSGPVL------SAETAPEP---- 54
Query: 76 DPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDT 131
P ++ P + +V RY + L + C + C +C + + +L++ +
Sbjct: 55 -PALADDDVPQQ-LVDRYGRTVRDLRLSITDRCNLRCTYCMPAQGLQWLPTPDLLTTAEL 112
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
E+ + + TGG+PL+ L++++ +L +
Sbjct: 113 ARLGRIAVERLGVERIRLTGGEPLLRRD--LEEIIGSLSAL 151
>gi|168206414|ref|ZP_02632419.1| putative radical SAM domain protein [Clostridium perfringens E str.
JGS1987]
gi|170662155|gb|EDT14838.1| putative radical SAM domain protein [Clostridium perfringens E str.
JGS1987]
Length = 370
Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP I +K+ C C+ CF + +SS + + +++ +++ TGG
Sbjct: 42 YPILIGIKITDKCNFSCKHCFSN----NSNFNEISSNLVDNIINNFLKENHPYKIYLTGG 97
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+P + +K + +++ L+ + +I HS + I +L + L
Sbjct: 98 EPFL--NKNIFNIIQKLK--PYCKIFSIHSNASL-----ITNDLAKKLSN 138
>gi|302387805|ref|YP_003823627.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
gi|302198433|gb|ADL06004.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
Length = 367
Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 37/230 (16%), Positives = 64/230 (27%), Gaps = 45/230 (19%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL + E I K I+ YP RI+L++ C ++C+ C R +
Sbjct: 13 DIGELTEVQRENS-RINREEALAGKTILQSYPRRIVLEMTSACNIHCKMCGRSSVEFKP- 70
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L KD L +I EV G G+P + H +
Sbjct: 71 --TLFHKDWLPLLE--PAADKIEEVTLLGWGEPTLH---------------PHFR----- 106
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-----SEEAIAAISRLANAGII 236
E ++ KE + + E + E L A
Sbjct: 107 -------------EFLKWAKEHRLRKFFCTNGTRLRELKEDIFNNEVELLTVSLDGACAE 153
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+Q + L ++ ++ YL +++
Sbjct: 154 TNNQIRAGADFDSITSALKDIADEKKRRGVEFPYLSIVMTMMESNYREFP 203
>gi|255534291|ref|YP_003094662.1| Queuosine Biosynthesis QueE Radical SAM [Flavobacteriaceae
bacterium 3519-10]
gi|255340487|gb|ACU06600.1| Queuosine Biosynthesis QueE Radical SAM [Flavobacteriaceae
bacterium 3519-10]
Length = 210
Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 6/113 (5%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EE +L E P+ ++ ++ H L C V C +C +E
Sbjct: 5 EENILLAEGEMLPVMEHFYTLQGEGAHTGKA-AYFIRLGGCDVGCHWCDVKESWDPTLHP 63
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
++S+ A ++ TGG+PL+ + + L LK L H++
Sbjct: 64 LMSAVQIAETAA-----KHCKTIVLTGGEPLMWNLEILTSRLKELGCTIHIET 111
>gi|221317881|ref|ZP_03599175.1| YfkA [Bacillus subtilis subsp. subtilis str. JH642]
gi|221322154|ref|ZP_03603448.1| YfkA [Bacillus subtilis subsp. subtilis str. SMY]
gi|255767189|ref|NP_388677.2| Fe-S oxidoreductase, radical SAM superfamily [Bacillus subtilis
subsp. subtilis str. 168]
gi|321314524|ref|YP_004206811.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis BSn5]
gi|261278024|sp|O34400|YFKA_BACSU RecName: Full=Putative protein yfkA
gi|225184816|emb|CAB12625.2| putative Fe-S oxidoreductase, radical SAM superfamily [Bacillus
subtilis subsp. subtilis str. 168]
gi|291483237|dbj|BAI84312.1| hypothetical protein BSNT_01329 [Bacillus subtilis subsp. natto
BEST195]
gi|320020798|gb|ADV95784.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis BSn5]
Length = 373
Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 25/190 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I ++ + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPIDLLLKRLEEI---PRLRSISITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K +++ + L H + +R +IN L ++ P +H +
Sbjct: 90 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIERYEWIIPYLDVLHIS 139
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H + + A G ++ + + E + RT V+ +
Sbjct: 140 HNW-------GTVEDFAEIGFAMMDRKPTFEQRARYFEKMIENSRTLVDAGVMVSAETML 192
Query: 275 --DLAAGTSH 282
H
Sbjct: 193 NKRTLPHIEH 202
>gi|194750546|ref|XP_001957591.1| GF10488 [Drosophila ananassae]
gi|190624873|gb|EDV40397.1| GF10488 [Drosophila ananassae]
Length = 386
Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
P ++ D + ++ + G H Y L C + C +C E V Q L
Sbjct: 47 PEKPIQQVDQLKNSPLTDTFGRHHTYLRISL---TERCNLRCDYCMPAEGVPLQPKANLL 103
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + LA I + + ++ TGG+P + + ++ ++ + ++ + +
Sbjct: 104 TTEEVLRLARIFVEQGVRKIRLTGGEPTVRRD--IVDIVAQMKALPQLEHVGITTNG 158
>gi|126460429|ref|YP_001056707.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM
11548]
gi|126250150|gb|ABO09241.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548]
Length = 261
Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 104 VCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C + C C+ R G ++ ++ A L I + +V +GG+PLI
Sbjct: 53 GCNLRCGMCWAWRNTSFVLSGGVWMAPEEVAARLDEIAKARGFRQVRISGGEPLIAPRHL 112
Query: 162 LQ 163
L+
Sbjct: 113 LE 114
>gi|310819551|ref|YP_003951909.1| MiaB-like tRNA modifying enzyme YliG [Stigmatella aurantiaca
DW4/3-1]
gi|309392623|gb|ADO70082.1| MiaB-like tRNA modifying enzyme YliG [Stigmatella aurantiaca
DW4/3-1]
Length = 459
Score = 40.3 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 44/247 (17%), Positives = 86/247 (34%), Gaps = 41/247 (16%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ IP + ++ N +P + + Y LK+ C C FC +
Sbjct: 114 RQVIPDPDYIH------------NAETPRENSMPSY--TAYLKVSEGCDNACAFCIIPTL 159
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL------SHKRLQKVLKTLRY 171
G Q+ ++ A + E+ D L +L +LK L
Sbjct: 160 RGGQRSRPIA-DIIAEATR--LADQGVQELNLVAQD-LTAYGHDLPGKPKLHDLLKELVK 215
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYE--FSEEAI---- 224
+ V+ +R H P+ ELI+ + K Y+ + H + +
Sbjct: 216 VD-VRWIRLH----YAYPRIFPDELIEVMATEKKIAKYLDMPLQHASDKLLTSMKRGRNS 270
Query: 225 ----AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPDLAAG 279
+++L L+ ++ L+ G+ + E L++ FV+ R + + G
Sbjct: 271 QFLTDLLAKLRARVPGLVMRTSLIVGLPGETEEDFELLKEFVKTQRFERLGVFQYSDEEG 330
Query: 280 TSHFRLT 286
T+ + +
Sbjct: 331 TAAYDMP 337
>gi|167757698|ref|ZP_02429825.1| hypothetical protein CLOSCI_00028 [Clostridium scindens ATCC 35704]
gi|167664580|gb|EDS08710.1| hypothetical protein CLOSCI_00028 [Clostridium scindens ATCC 35704]
Length = 427
Score = 40.3 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 25/129 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ ++ + ++ ++ EV+ TG
Sbjct: 141 HTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRSHDSVIREVEELARNGYKEVVLTG 195
Query: 152 GDPLILS-------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ LS L +L + I+ ++ +R S ++P+ I E + +
Sbjct: 196 ---IHLSSYGVDTGDDLLSLILS-IHEIEGIRRIRLGS----LEPRIITEEFAKTIAGLP 247
Query: 205 KPVYIAIHA 213
K + H
Sbjct: 248 K---MCPHF 253
>gi|189462269|ref|ZP_03011054.1| hypothetical protein BACCOP_02955 [Bacteroides coprocola DSM 17136]
gi|189431036|gb|EDV00021.1| hypothetical protein BACCOP_02955 [Bacteroides coprocola DSM 17136]
Length = 299
Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 21/113 (18%)
Query: 126 LSSKDTEAALAYIQEKSQIWEVI--FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-- 181
+ +D L I + V TGG+PL+ L++ K + H + +
Sbjct: 1 MPKEDFLRVLDNIALHTDPHHVFVVITGGEPLMRED--LEECGKAI----HDKGFPWGMV 54
Query: 182 SRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAA 226
+ + P+R L + A + ++ HP F + A
Sbjct: 55 TNGLAMTPERFTALLKAGMHTATVSLDGFADEHNWMRG---HPQSFDKAVRAI 104
>gi|26988695|ref|NP_744120.1| molybdenum cofactor biosynthesis protein A, putative [Pseudomonas
putida KT2440]
gi|24983483|gb|AAN67584.1|AE016388_4 molybdenum cofactor biosynthesis protein A, putative [Pseudomonas
putida KT2440]
Length = 337
Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C LS+ +AY+ E + I + TGG+PL+
Sbjct: 32 LTAACNYACTYCVPDGKRLVAAQDELSADALARGVAYLIEAAGIERLRITGGEPLVSP-- 89
Query: 161 RLQKVLKTLRYIK 173
RL + + +
Sbjct: 90 RLDAFMAAVAKLD 102
>gi|294794074|ref|ZP_06759211.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 3_1_44]
gi|294455644|gb|EFG24016.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 3_1_44]
Length = 325
Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C E+ + +LS + L + V TGG+PL+
Sbjct: 20 LTDACNFCCPYCRPAEITPQSQTQLLSVDEWMNILGAFH-HIGVKAVRLTGGEPLLYP-- 76
Query: 161 RLQKVLKTLRY 171
++++L ++
Sbjct: 77 HIEELLGRIKE 87
>gi|288555683|ref|YP_003427618.1| RNA modification enzyme, MiaB family [Bacillus pseudofirmus OF4]
gi|288546843|gb|ADC50726.1| RNA modification enzyme, MiaB family [Bacillus pseudofirmus OF4]
Length = 449
Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + A ++ E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-KDVIKQATQLVEA--GYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L + ++ +R S ++ ++ E+I+ + + +
Sbjct: 199 TGGYGED---LKDYSLARLLEDLEQVDGLKRIRISS----IEASQLTDEVIEVI-DRSEK 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|283955608|ref|ZP_06373101.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. jejuni 1336]
gi|283792833|gb|EFC31609.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. jejuni 1336]
Length = 320
Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 8/88 (9%)
Query: 101 LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLIL 157
+ C C +C + K +LS E +I+ I ++ TGG+PL+
Sbjct: 17 VTQRCNFRCLYCMPKIPFDYQPKENLLS---FEELFLFIKAAIDEGIEKIRITGGEPLLR 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L +K + K L +
Sbjct: 74 KD--LSIFIKMISDYKSDIDLAITTNGF 99
>gi|290955780|ref|YP_003486962.1| hypothetical protein SCAB_12261 [Streptomyces scabiei 87.22]
gi|260645306|emb|CBG68392.1| putative hypothetical protein [Streptomyces scabiei 87.22]
Length = 417
Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 84 SPLKGIV-HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY----- 137
+P G Y + +LK+ C + C +C+ + + +AA+A
Sbjct: 3 TPAPGHQPQAYLRQFVLKVHSRCNLDCDYCYVYH--SADTSWRDKPRLMDAAVAERVAGR 60
Query: 138 IQEKSQIWE-----VIFTGGDPLILSHKRLQKVLKTL 169
I E + + ++ GG+PL+L +RL+++L L
Sbjct: 61 IAEHATAHDLPDVGIVLHGGEPLLLGARRLEELLGIL 97
>gi|198275295|ref|ZP_03207826.1| hypothetical protein BACPLE_01454 [Bacteroides plebeius DSM 17135]
gi|198271878|gb|EDY96148.1| hypothetical protein BACPLE_01454 [Bacteroides plebeius DSM 17135]
Length = 472
Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L E + + + + + I + Y +RI++ + C C +C
Sbjct: 49 SHREAAVLLECNDPELVEEIYCLAREIKQKFYGNRIVMFAPLYLSNYCVNSCTYCPYHVK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ L+ +D + +Q+ + G DP+ + + + +KT+ IKH
Sbjct: 109 NKTIARKKLTQEDIRREVIALQDMGHKRLALEAGEDPIHNPIEYILESIKTIYSIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 169 AIRRVNVNIAATTVENYR 186
>gi|66811420|ref|XP_639890.1| molybdenum cofactor synthesis 1 [Dictyostelium discoideum AX4]
gi|74853957|sp|Q54NM6|MOCS1_DICDI RecName: Full=Molybdenum cofactor biosynthesis protein 1; Includes:
RecName: Full=Molybdenum cofactor biosynthesis protein
A; Includes: RecName: Full=Molybdenum cofactor
biosynthesis protein C
gi|60466835|gb|EAL64881.1| molybdenum cofactor synthesis 1 [Dictyostelium discoideum AX4]
Length = 630
Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVG-SQKG 123
E++ N + R+ L C + C++C E V SQ
Sbjct: 37 PTHSYEKKQQPIQNVDDKKYILTDRFNRHHTYLRISLTERCNLRCKYCMPEEGVMLSQAD 96
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+L++ + L+ + + + ++ FTGG+PL+ ++ +++ + IK +Q + +
Sbjct: 97 KILTTDEIIR-LSKLFVSAGVNKIRFTGGEPLVRKD--VEPLIEEVGKIKGLQKIGITTN 153
Query: 184 VP 185
Sbjct: 154 GI 155
>gi|319762446|ref|YP_004126383.1| molybdenum cofactor biosynthesis protein a [Alicycliphilus
denitrificans BC]
gi|330825703|ref|YP_004389006.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus
denitrificans K601]
gi|317117007|gb|ADU99495.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus
denitrificans BC]
gi|329311075|gb|AEB85490.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus
denitrificans K601]
Length = 389
Score = 40.3 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 80/231 (34%), Gaps = 41/231 (17%)
Query: 101 LLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ +LS ++ + ++ TGG+PL
Sbjct: 56 VTDRCNFRCSYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMAH-GVHKIRLTGGEPL 114
Query: 156 ILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDP----------QRIN---PELIQ 198
+ L+ +++ L ++ V L + ++ QR+ L
Sbjct: 115 LRKD--LELLVEQLAGLRTTEGRVPDLTLTTNGSLLARKARALKAAGLQRVTVSLDSLDD 172
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANL 257
+ V + E +A I AG + V+ +G ND + +
Sbjct: 173 AVFRRMNDVDFPV---------AEVLAGIEAAQAAGFGTIKVNMVVKRGTND--HEILRM 221
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQP 307
R F I ++ D T+ +R+ + ++++A L+ ++ P
Sbjct: 222 ARHFRGTGITLRFIEFMD-VGATNGWRMDQVVPSREVIARLQSELP--LVP 269
>gi|91776033|ref|YP_545789.1| pyrroloquinoline quinone biosynthesis protein PqqE [Methylobacillus
flagellatus KT]
gi|91710020|gb|ABE49948.1| Coenzyme PQQ biosynthesis protein E [Methylobacillus flagellatus
KT]
Length = 397
Score = 40.3 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 22/179 (12%), Positives = 63/179 (35%), Gaps = 29/179 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L ++ + CP++C FC+ LS++ L ++ + + +GG+PL+
Sbjct: 23 LLAEVTYRCPLHCAFCYNPTDYDKHTKNELSTEQWIQVLRDARKLGALQ-LGISGGEPLL 81
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANH 215
++ ++ + +++ I + + I K G + +++H
Sbjct: 82 RDD--IEDIVAEASSLG------YYTN-LITSGVGLTEKRISAFKAGGLDHIQLSMH--- 129
Query: 216 PYEFSEEA-------------IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ +EE + + G ++ V+ + + + +
Sbjct: 130 --DITEEINNFITGTRTFELKKKVAAMIKEHGYPMVLNVVIHRFNIKHVKEILEMAEAL 186
>gi|300788129|ref|YP_003768420.1| 2-methylthioadenine synthetase [Amycolatopsis mediterranei U32]
gi|299797643|gb|ADJ48018.1| 2-methylthioadenine synthetase [Amycolatopsis mediterranei U32]
Length = 478
Score = 40.3 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 48/151 (31%), Gaps = 29/151 (19%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT- 150
LK+ C C FC FR V Q +++ A + + E+
Sbjct: 177 VAALKIASGCDRRCSFCAIPSFRGSFVSRQPDEIVAEAMWLA-------EHGVKELFLVS 229
Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D L+++L L I ++ +R + P P+L++ +
Sbjct: 230 ENSTSYGKDFGRDGATALERLLPRLAEIDGIERVRV----SYLQPAETRPQLVKAIATTP 285
Query: 205 KPV-YIAIHANHPYEFSEEAIAAISRLANAG 234
Y + H E + R+ G
Sbjct: 286 GVAEYFDLSFQHSSE------QVLRRMRRFG 310
>gi|115372357|ref|ZP_01459666.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|115370570|gb|EAU69496.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
Length = 469
Score = 40.3 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 44/247 (17%), Positives = 86/247 (34%), Gaps = 41/247 (16%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ IP + ++ N +P + + Y LK+ C C FC +
Sbjct: 124 RQVIPDPDYIH------------NAETPRENSMPSY--TAYLKVSEGCDNACAFCIIPTL 169
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL------SHKRLQKVLKTLRY 171
G Q+ ++ A + E+ D L +L +LK L
Sbjct: 170 RGGQRSRPIA-DIIAEATR--LADQGVQELNLVAQD-LTAYGHDLPGKPKLHDLLKELVK 225
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYE--FSEEAI---- 224
+ V+ +R H P+ ELI+ + K Y+ + H + +
Sbjct: 226 VD-VRWIRLH----YAYPRIFPDELIEVMATEKKIAKYLDMPLQHASDKLLTSMKRGRNS 280
Query: 225 ----AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPDLAAG 279
+++L L+ ++ L+ G+ + E L++ FV+ R + + G
Sbjct: 281 QFLTDLLAKLRARVPGLVMRTSLIVGLPGETEEDFELLKEFVKTQRFERLGVFQYSDEEG 340
Query: 280 TSHFRLT 286
T+ + +
Sbjct: 341 TAAYDMP 347
>gi|312134177|ref|YP_004001515.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
owensensis OL]
gi|311774228|gb|ADQ03715.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
owensensis OL]
Length = 477
Score = 40.3 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 78/232 (33%), Gaps = 31/232 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C CR+C K L+ + + I+ + G DP
Sbjct: 87 LYISNFCVNNCRYCGYHRSNTKMKRRKLTMDEIRREVEIIESLGHKRIALELGEDP---K 143
Query: 159 HKRLQKVLKTLRYI-------KHVQILRFHSRVPIVDPQRINPE-----LIQCLKEAGKP 206
++ V+ +L+ I +++ + + ++ R+ E + + +P
Sbjct: 144 EAPIEYVVDSLKTIYSVYKEKGNIRRVNVNIAATTIEEYRMLKEAKIGTYVLFQETYHRP 203
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLMRTFVE 263
Y +H P + A+ R AGI L L + ++ +
Sbjct: 204 TYEYMHPEGPKSDYDWHAMAMDRAMQAGIDDVGLGVLFGLYDYKFEVVGLILHAKHLEER 263
Query: 264 LRIKPYYLHHPD--------LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ + P + + ++ +E +KIVA ++ L P
Sbjct: 264 FGVGPHTISVPRIRPAEGVEVTKERYPYLVSDDEFKKIVAIIR-----LAVP 310
>gi|304316648|ref|YP_003851793.1| MiaB-like protein tRNA modifying enzyme [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778150|gb|ADL68709.1| MiaB-like protein tRNA modifying enzyme [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 452
Score = 40.3 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 18/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C +C +C + + S+ + L ++ + EVI TG
Sbjct: 161 HTRAYLKIQDGCNQFCTYC-----IIPYARGPVRSRRPDNILDEVKRLRDNGYKEVILTG 215
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++K + + ++ +R S P + E + L +
Sbjct: 216 IHVASYGKD---LENINLLDIIKMIHEVDGIERIRMSSIEPTFLTEDFIKE-VASLPKFC 271
Query: 205 KPVYIAIH 212
+ ++++
Sbjct: 272 RHYHVSLQ 279
>gi|239813975|ref|YP_002942885.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Variovorax
paradoxus S110]
gi|239800552|gb|ACS17619.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Variovorax paradoxus
S110]
Length = 454
Score = 40.3 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 55/182 (30%), Gaps = 43/182 (23%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
+ ++ C YC +C V ++ + L I + EV G
Sbjct: 146 TAFVSIMEGCSKYCSYC-----VVPYTRGEEVNRPLDDVLVEIAGLADQGVREVTLLGQN 200
Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
GD ++ L +++ + I ++ +R+ + P P LI+ +
Sbjct: 201 VNAYRGRMGDTAEIADFAL--LIEYVAEIPGIERIRYTTS----HPNEFTPRLIEAYAKV 254
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+ + H + P R+ + +G + +R
Sbjct: 255 PQ---LVSHLHLP------VQHGSDRIL---------MAMKRGYT--AMEYKSTVRKLRA 294
Query: 264 LR 265
+R
Sbjct: 295 IR 296
>gi|316934848|ref|YP_004109830.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris DX-1]
gi|315602562|gb|ADU45097.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris DX-1]
Length = 344
Score = 40.3 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 13/158 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C +M + +L+ ++ + + + ++ TGG+PL+ +
Sbjct: 31 ITDRCDFRCVYCMAEDMTFLPRSDLLTLEELDRLCSAFIA-KGVRKLRLTGGEPLVRRNM 89
Query: 161 R-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-------H 212
L + L + L + + R EL C V +
Sbjct: 90 MSLVRSLSRHLDSGALDELTLTTNGSQL--ARFAAELADC-GVRRVNVSLDTLDPVEFRR 146
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
E +A I AG+ + +V+LKG N+D
Sbjct: 147 ITRWGELD-RVLAGIDAARAAGLAVKINTVVLKGCNED 183
>gi|124486075|ref|YP_001030691.1| GTP cyclohydrolase subunit MoaA [Methanocorpusculum labreanum Z]
gi|124363616|gb|ABN07424.1| GTP cyclohydrolase subunit MoaA [Methanocorpusculum labreanum Z]
Length = 319
Score = 40.3 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 12/82 (14%)
Query: 101 LLHVCPVYCRFCFR-----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C + C +C R + ++ ++ + E + + TGG+PL
Sbjct: 26 VTSACDLRCIYCHREGEGDNGCTRDDHASQMTKEEISELIGVFAE-LGVKTIKLTGGEPL 84
Query: 156 ILSHKRLQKVLKTLRYI-KHVQ 176
+ +L +R I H++
Sbjct: 85 LRPD-----LLDIIRSIPPHIE 101
>gi|326797578|ref|YP_004315397.1| molybdenum cofactor biosynthesis protein A [Sphingobacterium sp.
21]
gi|326548342|gb|ADZ76727.1| molybdenum cofactor biosynthesis protein A [Sphingobacterium sp.
21]
Length = 329
Score = 39.9 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 22/172 (12%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146
G +H Y L C + C +C E + ++ + + LA I + +
Sbjct: 10 GRLHNYLRISL---TDNCNLRCFYCMPEEHYAFTPHAKLMQVHEIDQ-LAKIFVDHGVTK 65
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AG 204
+ TGG+PL+ +++ L + V++ + RIN L Q +K +
Sbjct: 66 IRLTGGEPLVRKDAP--AIIEILSKLP-VEL------TMTTNGIRINDMLPQIVKANFSS 116
Query: 205 KPVYIAI----HANHP--YEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
V + N ++ I L I V++KG+NDD
Sbjct: 117 INVSLDTLQREKFNRITRRDYFNRVRHNIDLLIKEQIHTKINVVVMKGLNDD 168
>gi|138898391|ref|YP_001127576.1| putative Heme biosynthesis protein [Geobacillus thermodenitrificans
NG80-2]
gi|134268637|gb|ABO68831.1| Putative Heme biosynthesis protein [Geobacillus thermodenitrificans
NG80-2]
Length = 453
Score = 39.9 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 91/257 (35%), Gaps = 52/257 (20%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
E ++ + + + + +P RI +++ +C C FC+ + LS +D
Sbjct: 86 CEHKEKVWEWDIEKKHNKLLEFPLRIEIEVTSLCNWNCGFCYNVWKI----DPNLSDEDV 141
Query: 132 EAALAYIQEKSQIWE----------------VIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
+ + + +K E V ++GG+ L+ ++++L+
Sbjct: 142 QKKIKMLPQKHLPKETVFKILDECNENGCFIVRYSGGETLLHPD--IEEILEYGGS---- 195
Query: 176 QILRFHSRVPIVDPQR-INPELIQCLKEAGK-PVYIAIHAN---HPYEFS------EEAI 224
+ I PE + K+ V I++H + H + ++A+
Sbjct: 196 ----LGLYQVVFTNGHFITPERAERFKKYNVGTVLISLHGDKRLH-NLLTGHKMAYQKAV 250
Query: 225 AAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH- 282
+AI L GI +++ +++ + N +++ + Y +
Sbjct: 251 SAIETLVKTGIEVVVELTLVKENFNSAIDVMKDAYNR------GARYFSVMRYVPTGKND 304
Query: 283 --FRLTIEEGQKIVASL 297
+ + IE ++ +
Sbjct: 305 DKYGVPIENMLPLMKQI 321
>gi|311067283|ref|YP_003972206.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus atrophaeus 1942]
gi|310867800|gb|ADP31275.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus atrophaeus 1942]
Length = 372
Score = 39.9 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 65/206 (31%), Gaps = 31/206 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 33 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPIDLLLQRLEEI---PLLRSISITGGEP-M 88
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K +++ + L H + +R +IN L ++ P +H +
Sbjct: 89 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIERYEWIIPYLDVLHIS 138
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H + + A+ G ++ + + E + RT V+ +
Sbjct: 139 HNW-------GTVEDFADIGFAMMDKKPTFEQRARYFEKMIQNSRTLVDAGVMVSAETML 191
Query: 275 --DLAAGTSHFRLTIEEGQKIVASLK 298
H ++IV +K
Sbjct: 192 NKRTLPHIEHIH------RQIVEEMK 211
>gi|225375407|ref|ZP_03752628.1| hypothetical protein ROSEINA2194_01032 [Roseburia inulinivorans DSM
16841]
gi|225212743|gb|EEG95097.1| hypothetical protein ROSEINA2194_01032 [Roseburia inulinivorans DSM
16841]
Length = 438
Score = 39.9 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 48/128 (37%), Gaps = 23/128 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+++E + ++ + E++ TG
Sbjct: 146 HTRAFIKVQDGCNQFCSYC-----IIPFARGRVRSRNSEDVIREVKRLAEHGFREIVLTG 200
Query: 152 GDPLILSH------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ LS L +++ + + ++ +R S ++P+ + L K
Sbjct: 201 ---IHLSSYGVDTGDNLLHLIREVHNVDGIERIRLGS----LEPRIVTDGFAAALAGLPK 253
Query: 206 PVYIAIHA 213
I H
Sbjct: 254 ---ICPHF 258
>gi|323703874|ref|ZP_08115508.1| molybdenum cofactor biosynthesis protein A [Desulfotomaculum
nigrificans DSM 574]
gi|323531162|gb|EGB21067.1| molybdenum cofactor biosynthesis protein A [Desulfotomaculum
nigrificans DSM 574]
Length = 325
Score = 39.9 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 71/216 (32%), Gaps = 36/216 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E V +LS ++ + I +V TGG+PL+ +
Sbjct: 16 VTDRCNLRCVYCMPPEGVKQTPHWEILSLEEFGRVVD-AASDIGIRKVRITGGEPLVRKN 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
+ + + + + + + + ++ LK+AG +
Sbjct: 75 --IIDLFRYIAANPLIDDISITTNGILF------ADMAADLKKAGLN-RVNFSL---DSL 122
Query: 220 SEEAIAAISRLAN-----AGI---------ILLSQSVLLKGINDDPEI-LANLMRTF-VE 263
+ + I+RL GI + V ++G+ND A L R +
Sbjct: 123 NPQNFKDITRLGKFEDVWRGINKAIELDLHPVKLNVVAVRGVNDQEFTDFARLSREMPLH 182
Query: 264 LRIKPYYLHHPDLAAGTSHFRL-TIEEGQKIVASLK 298
+R + + + +I+ L+
Sbjct: 183 IR-----FIELMPIGECNPWAVGNFISANEIMTRLR 213
>gi|303233705|ref|ZP_07320359.1| MiaB-like protein [Finegoldia magna BVS033A4]
gi|302495139|gb|EFL54891.1| MiaB-like protein [Finegoldia magna BVS033A4]
Length = 430
Score = 39.9 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 15/111 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG- 151
R +K+ C +C +C + + S++ + + + E++ TG
Sbjct: 142 TRAYIKIQEGCSQFCSYC-----IIPYARGPIRSRNIRDIVLEAKRLADNGFKEIVLTGI 196
Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
D L V++ + I ++ +R S P + ++ L
Sbjct: 197 HVASYGKD-FDNKDIGLIDVIEDIANIDKIKRIRLSSLEPRIVDKKFLDRL 246
>gi|302380512|ref|ZP_07268977.1| MiaB-like protein [Finegoldia magna ACS-171-V-Col3]
gi|302311455|gb|EFK93471.1| MiaB-like protein [Finegoldia magna ACS-171-V-Col3]
Length = 430
Score = 39.9 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 15/111 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG- 151
R +K+ C +C +C + + S++ + + + E++ TG
Sbjct: 142 TRAYIKIQEGCSQFCSYC-----IIPYARGPIRSRNIRDIVLEAKRLADNGFKEIVLTGI 196
Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
D L V++ + I ++ +R S P + ++ L
Sbjct: 197 HVASYGKD-FDNKDIGLIDVIEDIANIDKIKRIRLSSLEPRIVDKKFLDRL 246
>gi|284993307|ref|YP_003411862.1| molybdenum cofactor biosynthesis protein A [Geodermatophilus
obscurus DSM 43160]
gi|284066553|gb|ADB77491.1| molybdenum cofactor biosynthesis protein A [Geodermatophilus
obscurus DSM 43160]
Length = 326
Score = 39.9 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 80/209 (38%), Gaps = 23/209 (11%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + K VL+ ++ + E+ I EV FTGG+PL+
Sbjct: 15 LTDRCNLRCTYCMPPEGLDWLPKVEVLTDEEIARLVRIGVEQLGIREVRFTGGEPLLRP- 73
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPELIQCLKEAGKPVYI 209
L ++ ++ + + + RIN L ++ K +
Sbjct: 74 -GLVGIVAAATALQPRPEVSLTTNAIGLARVAPALAAAGLDRINVSLDTLDRDRFKQL-- 130
Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
H + +A ++ AG+ + +VLL+G+N+ E L+ +E +
Sbjct: 131 ----THRDRLD-DVLAGLAAAQRAGLTPVKVNAVLLRGMNE--EDAVPLLDFCLEHGYQL 183
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
++ L A + R + + I+ L
Sbjct: 184 RFIEQMPLDAHHAWTRGEMVTAEDILERL 212
>gi|221065180|ref|ZP_03541285.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Comamonas testosteroni
KF-1]
gi|220710203|gb|EED65571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Comamonas testosteroni
KF-1]
Length = 442
Score = 39.9 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 93/283 (32%), Gaps = 48/283 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG----- 151
+ ++ C YC +C G + +D +A + E + E+ G
Sbjct: 147 AFVSIMEGCSKYCSYCVVPYTRGEEVSRPF--EDVLVEVAGLAE-QGVKEITLLGQNVNA 203
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
GD ++ L +L+ + I ++ +R+ + P P LI+ +
Sbjct: 204 YLGKMGDTSEMADFAL--LLEYVAEIPGIERIRYTTS----HPNEFTPRLIEAYARIPQ- 256
Query: 207 VYIAIHANHPYE-------------FSE-EAIAAISRLANAGIILLSQSVLLKGI-NDDP 251
+ H + P + ++ E + I +L L S + G +
Sbjct: 257 --LVSHLHLPVQHGSDKILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETE 314
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTS----HFRLTIEEGQKIVASLKEKISGLCQP 307
E +M+ ++R + GT H E + + L+ I+
Sbjct: 315 EDFQKMMKLIHDVRFDNSFSFIFSPRPGTPAANLHDDTPHEVKLRRLQELQAVIN----- 369
Query: 308 FYILDLPGG-YGKV-KIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+I ++ G V ++ + K + N V ++P
Sbjct: 370 SHIKEISEERVGTVQRLLIEGVSKRDGSELMGRTYCNRVVNFP 412
>gi|148259214|ref|YP_001233341.1| radical SAM domain-containing protein [Acidiphilium cryptum JF-5]
gi|146400895|gb|ABQ29422.1| Radical SAM domain protein [Acidiphilium cryptum JF-5]
Length = 579
Score = 39.9 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 15/160 (9%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E P + L+G+ + + +C + C C+
Sbjct: 270 ILPHAERAATATRLECAPAA-DATVALEGL-----ETLWFNTGTLCNLACEGCYIESSPR 323
Query: 120 SQKGTVLSSKDTEAALAYIQ-EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + L L ++ E+ TGG+P + ++ L + +
Sbjct: 324 NDRLAWLRLDGFRRVLDEAADRHPELREIGLTGGEPFMNPD------IEALIGMALDRGY 377
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
R + P R + G+ +++ + +H E
Sbjct: 378 RVLVLTNAMTPMR--HHMAAIAGWRGRDLHLRVSLDHHTE 415
>gi|319899903|ref|YP_004159631.1| MiaB-like tRNA modifying enzyme [Bacteroides helcogenes P 36-108]
gi|319414934|gb|ADV42045.1| MiaB-like tRNA modifying enzyme [Bacteroides helcogenes P 36-108]
Length = 439
Score = 39.9 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 60/155 (38%), Gaps = 18/155 (11%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYI 138
+ HS R LK+ C YC +C G + ++S + A+A
Sbjct: 135 DIHSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTIPFARGRSRNGTVASMVEQARQAVA-- 192
Query: 139 QEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
E++ TG GD + + ++K L ++ ++ R S ++P + E
Sbjct: 193 ---DGGKEIVLTGVNIGDFGKSTGETFFDLVKALDGVEGIERYRISS----IEPNLLTDE 245
Query: 196 LIQCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
+I+ + + + H + P S+E + + R
Sbjct: 246 IIEYVAGSRR---FMPHFHIPLQSGSDEVLKLMRR 277
>gi|284036269|ref|YP_003386199.1| MiaB-like tRNA modifying enzyme [Spirosoma linguale DSM 74]
gi|283815562|gb|ADB37400.1| MiaB-like tRNA modifying enzyme [Spirosoma linguale DSM 74]
Length = 449
Score = 39.9 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 52/131 (39%), Gaps = 16/131 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C C +C G + + + A I E+ + E++ TG
Sbjct: 150 RTRTFLKVQDGCDYPCAYCTIPLARGKSRSDTI--ANVVKAAREIAER-GVKEIVLTGVN 206
Query: 152 -GDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GD +++ + +++ L + ++ R S ++P + E+I + ++ +
Sbjct: 207 IGDFGLINGQRTETFFDLVQALDEVDGIERFRISS----IEPNLLTDEIIAFVAQSKR-- 260
Query: 208 YIAIHANHPYE 218
H + P +
Sbjct: 261 -FVPHFHIPLQ 270
>gi|312127656|ref|YP_003992530.1| RNA modification enzyme, miab family [Caldicellulosiruptor
hydrothermalis 108]
gi|311777675|gb|ADQ07161.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
hydrothermalis 108]
Length = 434
Score = 39.9 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 77/229 (33%), Gaps = 23/229 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFT- 150
R +K+ C +C +C G+ + L ++ + ++ I + +
Sbjct: 141 RSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSLKSIEEEVIRLVQKGYKEFVITGINISS 200
Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
G D + L V++ + I+ V+ +R S P++ L+ + +++
Sbjct: 201 YGKD--LDGKVTLIDVIERVNKIEGVKRIRLSSLEPVIMNDEFIERLLG-FDKLCHHLHL 257
Query: 210 AIHANHPYEF--------SEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRT 260
++ + + + + R+ + + ++ G + E +
Sbjct: 258 SLQSGSDKILKLMNRHYTTAKYQGIVDRIREKWEDVAFTTDIIVGFPGETEEDFNATLEF 317
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLT-------IEEGQKIVASLKEKIS 302
++ ++ GT + + E K++ + ++S
Sbjct: 318 VQKIGFSRIHVFRFSPKKGTKAYEMPNQVDSKEKERRSKVMKEVAARLS 366
>gi|288574545|ref|ZP_06392902.1| molybdenum cofactor biosynthesis protein A [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570286|gb|EFC91843.1| molybdenum cofactor biosynthesis protein A [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 325
Score = 39.9 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
RY + + + + C CR+C V ++S +D + + + FT
Sbjct: 11 RYLNYVRISVTDRCNFRCRYCMPSRGVPTLSHEEIMSYEDILFLAKTLSSM-GVKRLRFT 69
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+P + L+ L+ + + +V P
Sbjct: 70 GGEPFVRKDFV--PFLERLKSELPDLAVAVTTNGSLVKP 106
>gi|224106595|ref|XP_002314219.1| predicted protein [Populus trichocarpa]
gi|222850627|gb|EEE88174.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 39.9 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 5/121 (4%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L L + + G +H Y L C + C++C E V + L
Sbjct: 15 LRNLSFSMSTNLASDMLIDSFGRMHTYLRISL---TERCNLRCQYCMPAEGVELTRSPQL 71
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S+D LA + S + ++ TGG+P I ++ + L +K ++ L +
Sbjct: 72 LSQDEIVHLANLFVSSGVDKIRLTGGEPTIRKD--IEDICLQLSNLKGLKTLAMTTNGIT 129
Query: 187 V 187
+
Sbjct: 130 L 130
>gi|119716793|ref|YP_923758.1| molybdenum cofactor biosynthesis protein A [Nocardioides sp. JS614]
gi|119537454|gb|ABL82071.1| GTP cyclohydrolase subunit MoaA [Nocardioides sp. JS614]
Length = 333
Score = 39.9 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 13/158 (8%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + +VL+ + + E I EV FTGG+PL+
Sbjct: 22 LTDRCNLRCSYCMPAEGLDWLPDESVLTDDEVVRLVRIGVELLGIREVRFTGGEPLVR-- 79
Query: 160 KRLQKVLKTLRYI-KHVQILRFH-----SRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ L +++ I V+ +RV + + L + + HA
Sbjct: 80 RGLVDIVRRTHEIDPTVETSLTTNALGLARVADALAEAGLDRVNVSLDSIRRETF---HA 136
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + +A +S +AG+ + +VL++G ND
Sbjct: 137 ITRRDRLPDVLAGLSAARDAGLGPVKVNAVLMRGQNDQ 174
>gi|312129877|ref|YP_003997217.1| miab-like tRNA modifying enzyme [Leadbetterella byssophila DSM
17132]
gi|311906423|gb|ADQ16864.1| MiaB-like tRNA modifying enzyme [Leadbetterella byssophila DSM
17132]
Length = 442
Score = 39.9 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 24/168 (14%)
Query: 65 EELNILPEEREDPIGDNNHSP---LKGIVH-RY----PDRILLKLLHVCPVYCRFCFRRE 116
EL E+ P+ + ++ H Y R LK+ C C +C
Sbjct: 106 HELLPTFEKTSRPVEEKVYARSIDEPLEYHTSYSLHDRTRTFLKVQDGCDYPCSYCTIPM 165
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLIL---SHKRLQKVLKTLR 170
G+ + + ++ A I + E++ TG GD I+ +++ L
Sbjct: 166 ARGASRSDTI--ENVVKAAREIAAN-GVKEIVLTGVNIGDFGIIDGKRTSSFLDLIQALD 222
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
++ ++ R S ++P + E+IQ + + + H + P +
Sbjct: 223 EVEGIERFRISS----IEPNLLTNEIIQFVAHSKR---FVPHFHIPLQ 263
>gi|261415480|ref|YP_003249163.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371936|gb|ACX74681.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327321|gb|ADL26522.1| putative FeMo cofactor biosynthesis protein NifB [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 290
Score = 39.9 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 45/234 (19%), Positives = 72/234 (30%), Gaps = 24/234 (10%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-DTEAALAYIQEK-- 141
P G RI L + C + CRFC RR +Q S E A YI++
Sbjct: 13 PCFGACKNRKGRIHLPVAPGCNIECRFCDRRINEDAQVPGNTSKVIKPEEACGYIRKALE 72
Query: 142 --SQIWEVIFTG-GD----PLILSHKRL--QKVLKTLRYIKH---------VQILRFHSR 183
+ V G GD P L RL ++ +R + +++
Sbjct: 73 FVPDLTTVGIAGPGDTLATPFALDTFRLVKKEFPNLIRCMSTNGLLLNDKADEVIDVGID 132
Query: 184 VPIVDPQRINPELIQCLKEA-GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
V ++PE+ + + I ++A +G ++ +V
Sbjct: 133 TLTVTVNAVDPEIEAMINARIFYHGKTYTGVEAAEILIHNQLEGIRKVAKSGTLVKVNTV 192
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L GIND+ T E Y + G +G I
Sbjct: 193 LCPGINDNHIEDVAA--TVREAGAIIYNIIPLIPQNGFKDLPAPTPKGLAIAQE 244
>gi|229592098|ref|YP_002874217.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
fluorescens SBW25]
gi|229363964|emb|CAY51493.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
fluorescens SBW25]
Length = 322
Score = 39.9 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 70/194 (36%), Gaps = 19/194 (9%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + C C +C LS++ + Y+ E + I + T
Sbjct: 8 RRFRNLRISL-TSACNYACTYCVPNGKRLVAAQDELSAEAMARGVEYLIEAAGIDRLRIT 66
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+PL+ +L+ + + + + + + Q + +L ++ K + ++
Sbjct: 67 GGEPLVSP--KLEAFMGAVGQMG-LSDISLTTNG-----QLLARKLPLLVEAGIKRINVS 118
Query: 211 IHANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ P F A + + AGI + V L+G N D + L+ +
Sbjct: 119 LDTLDPDAFRSIARGGDLATVLDGMDQARAAGIKIKVNMVPLRGQNLDQ--VMPLLDYCL 176
Query: 263 ELRIKPYYLHHPDL 276
E + ++ +
Sbjct: 177 ERGYELRFIELMRM 190
>gi|187778464|ref|ZP_02994937.1| hypothetical protein CLOSPO_02058 [Clostridium sporogenes ATCC
15579]
gi|187772089|gb|EDU35891.1| hypothetical protein CLOSPO_02058 [Clostridium sporogenes ATCC
15579]
Length = 432
Score = 39.9 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 21/130 (16%)
Query: 93 YPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVI 148
Y D R LK+ C +C +C + SK E + ++ K E+I
Sbjct: 138 YRDKTRAFLKIQDGCNRFCSYCL-----IPFARGAVCSKKPEKVMEEVRKLSKHGFKEII 192
Query: 149 FTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+G D L +L+ + ++ ++ +R S P E I + +
Sbjct: 193 LSGIDIASYGFDLEGKYNLTSILEDIDKVEGIERIRIGSIDPTF----FTEEEIIRISKL 248
Query: 204 GKPVYIAIHA 213
K H
Sbjct: 249 KK---FCPHF 255
>gi|167752159|ref|ZP_02424286.1| hypothetical protein ALIPUT_00401 [Alistipes putredinis DSM 17216]
gi|167660400|gb|EDS04530.1| hypothetical protein ALIPUT_00401 [Alistipes putredinis DSM 17216]
Length = 433
Score = 39.9 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 15/143 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C C +C G+ + D I Q E++ TG
Sbjct: 142 RTRAFLKVQDGCDYKCAYCTIHYARGAS--RNMPIADLVKEAEQIAAAGQ-REIVITGIN 198
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + +R +L+ L ++ ++ R S ++P + E+I + K
Sbjct: 199 TGDFGRTTGERFIDLLRALNEVEGIERYRISS----IEPNLLTDEIIAFCASSPK---FQ 251
Query: 211 IHANHPYEFSEEAIAAISRLANA 233
H + P + + ++R+
Sbjct: 252 HHFHIP--LQSGSDSVLARMRRR 272
>gi|152992903|ref|YP_001358624.1| type II restriction-modification enzyme, R and M protein
[Sulfurovum sp. NBC37-1]
gi|151424764|dbj|BAF72267.1| type II restriction-modification enzyme, R and M protein
[Sulfurovum sp. NBC37-1]
Length = 1232
Score = 39.9 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 19/112 (16%)
Query: 238 LSQSVLLKGIN-DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT-IEEGQKIVA 295
+Q LKG N L + + E L D A G+ HF ++ + +I +
Sbjct: 490 FNQ---LKGWNCSSLNELDDKIEDKKEANAIIDSLSICDPAVGSGHFLVSSLNTILEIKS 546
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
L+ + D G +I V N + D + +Y
Sbjct: 547 QLR----------ILFDAEGK----RIKDDYELSVENDELIVRDDEGEIFEY 584
>gi|254511606|ref|ZP_05123673.1| radical SAM domain protein [Rhodobacteraceae bacterium KLH11]
gi|221535317|gb|EEE38305.1| radical SAM domain protein [Rhodobacteraceae bacterium KLH11]
Length = 317
Score = 39.9 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 58/155 (37%), Gaps = 14/155 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGG 152
P+ + +C + C C+ + +++ + L I + I E+ FTGG
Sbjct: 34 PETLWFNTGTLCNIECVNCYIASSPTNDALVYITTDEVRDYLDQIQERNWPIREIGFTGG 93
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+P ++ + + L V I + + + +++ L++ ++ + + I
Sbjct: 94 EPF-MNPQMIDMTRAALERGYEVLI--LTNAMLPMMRRKMREGLLELQRDYADKLTLRIS 150
Query: 213 ANHPY-EFSEE---------AIAAISRLANAGIIL 237
+H E +E + + L + G +
Sbjct: 151 VDHYRPELHDEERGKGSFAKTLTGMEWLRDNGFRM 185
>gi|210610065|ref|ZP_03288244.1| hypothetical protein CLONEX_00430 [Clostridium nexile DSM 1787]
gi|210152676|gb|EEA83682.1| hypothetical protein CLONEX_00430 [Clostridium nexile DSM 1787]
Length = 430
Score = 39.9 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 54/152 (35%), Gaps = 30/152 (19%)
Query: 79 GDNNHSPLKGIVHRYPD----------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
G N H Y + R +K+ C +C +C G + +
Sbjct: 118 GQNKAVIDINHTHEYEEMHLNKTAEHTRAYIKVQDGCNQFCTYCIIPFARGRVRSR--AK 175
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILS-------HKRLQKVLKTLRYIKHVQILRFH 181
+D + + EV+ TG + LS ++ L ++ + I+ ++ +R
Sbjct: 176 EDVVREVTELAANGY-QEVVLTG---IHLSSYGVDLENENLLSLILAVNEIEGIKRIRLG 231
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
S ++P+ I + ++ + K + H
Sbjct: 232 S----LEPRIITEDFVKTISGLEK---MCPHF 256
>gi|32477342|ref|NP_870336.1| hypothetical protein RB12138 [Rhodopirellula baltica SH 1]
gi|32447893|emb|CAD77411.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
Length = 428
Score = 39.9 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 73/215 (33%), Gaps = 32/215 (14%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREM 117
+P E+ E D +G + + + R +K+ C + C +C M
Sbjct: 90 ALPGVVEVLTDKRELGDLMGRFGVIDVPTGLSGFAGRKRAYVKVQDGCLLRCSYCI-IPM 148
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------------HKRLQ 163
V + + S + + + EVI TG + L RL
Sbjct: 149 VRPKLHSRPSQEIVDEVTRLVDAGH--REVILTG---IHLGHYGVDWNRNKPREEWVRLA 203
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
++K L I +R S ++ + ELI + E + V +H +
Sbjct: 204 HLVKDLCQIPGQFRIRMSS----IEATEVTRELIGVMAEFPEKVVPHLHLC----LQSGS 255
Query: 224 IAAISRLANA-GIIL-LSQSVLLKGINDDPEILAN 256
+ + R+ G + L + LL+ D P I +
Sbjct: 256 DSVLRRMRRRWGTKMFLDRCRLLRESLDRPAITTD 290
>gi|326533268|dbj|BAJ93606.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 39.9 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + + L C + C++C E V + K +LS + +A + S + ++ T
Sbjct: 147 RFHNYLRISLTERCNLRCQYCMPAEGVELTPKAELLSHHEIIR-IANLFVTSGVDKIRLT 205
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+P + L+ + L +K ++ + + ++
Sbjct: 206 GGEPTVRKD--LEDICLHLSGLKGLKTIAMTTNGIVLSK 242
>gi|68536684|ref|YP_251389.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
jeikeium K411]
gi|68264283|emb|CAI37771.1| molybdenum cofactor biosynthesis protein [Corynebacterium jeikeium
K411]
Length = 327
Score = 39.9 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 101 LLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C M +LS + + + +V FTGG+PL+ +
Sbjct: 18 LTDRCNLRCTYCMPADGMDWFPTSNLLSDSEVVRLVKIGVRDLGVTKVRFTGGEPLLRKN 77
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
L+ V+ + ++ +L + +
Sbjct: 78 --LEGVIAEISELEPQPVLALTTNATALTH 105
>gi|325847827|ref|ZP_08170049.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480845|gb|EGC83898.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 166
Score = 39.9 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 85 PLKGIVHRY-----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
G + +Y P + C C+ CF E + G + + K T+ ++Y++
Sbjct: 1 MRYGQIRKYDVANGPGIRTSFFVTGCHANCKNCFNNEYMNPNFGNLWTEKQTQEVISYLK 60
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ ++ + GG+P S + L K++K +R
Sbjct: 61 KD-EVEGLTILGGEPFE-STEDLIKIVKKIRE 90
>gi|255020721|ref|ZP_05292781.1| tRNA-i(6)A37 methylthiotransferase [Acidithiobacillus caldus ATCC
51756]
gi|254969837|gb|EET27339.1| tRNA-i(6)A37 methylthiotransferase [Acidithiobacillus caldus ATCC
51756]
Length = 437
Score = 39.9 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 46/148 (31%), Gaps = 23/148 (15%)
Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
D Q PQ + L E+ D + + + C +C FC
Sbjct: 103 DACRAQRQPQVD-LRFPELEKFDRLPQRPGREGP--------TAFVTVQEGCDKFCTFCV 153
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-------GDPLILSHKRLQK 164
G + + L +++ + EV G G ++ L +
Sbjct: 154 VPHTRGREFSRPMP-----DILREVRQLVDQGVREVTLLGQNVNAYRGATGLIGEGDLAE 208
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRI 192
+L+ L I + LR+ + P R+
Sbjct: 209 LLERLARIPDLLRLRYTTSHPNNLDDRL 236
>gi|88811648|ref|ZP_01126902.1| molybdopterin biosynthesis, protein A [Nitrococcus mobilis Nb-231]
gi|88791039|gb|EAR22152.1| molybdopterin biosynthesis, protein A [Nitrococcus mobilis Nb-231]
Length = 349
Score = 39.9 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 66/180 (36%), Gaps = 10/180 (5%)
Query: 79 GDNNHSPLKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
+ +V R+ ++ L L C C +C + + + +LS ++
Sbjct: 17 AEEATRQGDVLVDRFGRSKRKLRLSLTDRCNFRCGYCMPEDPEWTPRHELLSFEELLGIA 76
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
+ + + TGG+PL+ + + ++ L ++ + + R R
Sbjct: 77 QLFVSRMGVTNIRLTGGEPLVR--RGVPAFIERLNELRPLGLERISMTSNASLLDRHAAA 134
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
L++ + +I + + E + I +AG+ + +V ++G N+D
Sbjct: 135 LVKAGLDDVNISIDSIDPERFRQMTGGGELEPVLRGIRATRDAGLSMKLNAVAIRGENED 194
>gi|320011547|gb|ADW06397.1| molybdenum cofactor biosynthesis protein A [Streptomyces
flavogriseus ATCC 33331]
Length = 329
Score = 39.9 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 13/158 (8%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + K +LS + + + EV FTGG+PL+
Sbjct: 17 LTDKCNLRCTYCMPEEGLQWLSKTDLLSDDEIVRLVRVAVTDLGVTEVRFTGGEPLLRP- 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHS------RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L +++ ++ + + R + L V+ +
Sbjct: 76 -GLVSIVERCAALEPRPRMSLTTNGIGLKRTASALKAAGLDRVNVSLDTLRPDVFKTLTR 134
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ ++ + + AG+ + SVL+ G+N D
Sbjct: 135 ---RDRHKDVLEGLEAAREAGLTPVKVNSVLMPGLNAD 169
>gi|224025812|ref|ZP_03644178.1| hypothetical protein BACCOPRO_02554 [Bacteroides coprophilus DSM
18228]
gi|224019048|gb|EEF77046.1| hypothetical protein BACCOPRO_02554 [Bacteroides coprophilus DSM
18228]
Length = 163
Score = 39.9 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 7/77 (9%)
Query: 93 YPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
YP+ I L C C C E Q G L+ + E + I +
Sbjct: 8 YPETIVDGEGIRFSIYLAGCHHRCPGCHNPESWNPQAGKPLTPEVLEDIIQSINSNPLLD 67
Query: 146 EVIFTGGDPLILSHKRL 162
+ F+GGDP + L
Sbjct: 68 GITFSGGDPFFNPKEFL 84
>gi|325662619|ref|ZP_08151219.1| molybdenum cofactor biosynthesis protein A [Lachnospiraceae
bacterium 4_1_37FAA]
gi|325471116|gb|EGC74342.1| molybdenum cofactor biosynthesis protein A [Lachnospiraceae
bacterium 4_1_37FAA]
Length = 332
Score = 39.9 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C + +L+ ++ +I + I + TGG+PL+
Sbjct: 16 ITDRCNLRCRYCMPDGIKSIPMEQILTLEEIAEVC-WIASELGITKFKVTGGEPLVRKGC 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVP 185
++++ L+ + + + + +
Sbjct: 75 M--ELIRMLKALPYTEQVTLTTNGI 97
>gi|307187662|gb|EFN72634.1| Molybdenum cofactor biosynthesis protein 1 B [Camponotus
floridanus]
Length = 571
Score = 39.9 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 43/108 (39%), Gaps = 7/108 (6%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKS 142
+ G H Y + + + C + C +C E V +++ +L + + +
Sbjct: 47 TDTFGRKHTY---LRISITERCNLRCTYCMPAEGVKLTKRENILRTDEIIQIADLFVK-E 102
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ ++ TGG+P + + ++ L+ + ++ + + + Q
Sbjct: 103 GVRKIRLTGGEPTVRKD--IIDIVGQLKQLTDLEQIAITTNGLTLTRQ 148
>gi|296331887|ref|ZP_06874352.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305673499|ref|YP_003865171.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296150965|gb|EFG91849.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305411743|gb|ADM36862.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 373
Score = 39.9 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 58/190 (30%), Gaps = 25/190 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I ++ + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPIDLLLKRLEEI---PRLRSISITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K +++ + L H + +R +IN L + P +H +
Sbjct: 90 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIDRYEWIIPYLDVLHIS 139
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H + + A G ++ + + E + RT V+ +
Sbjct: 140 HNW-------GTVEDFAEIGFAMMDRKPTFEQRARYFEKMIENSRTLVDAGVMVSAETML 192
Query: 275 --DLAAGTSH 282
H
Sbjct: 193 NKRTLPHIEH 202
>gi|303229436|ref|ZP_07316226.1| molybdenum cofactor biosynthesis protein A [Veillonella atypica
ACS-134-V-Col7a]
gi|302515972|gb|EFL57924.1| molybdenum cofactor biosynthesis protein A [Veillonella atypica
ACS-134-V-Col7a]
Length = 321
Score = 39.9 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 14/158 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C E+ + +LS + L + + V TGG+PL+
Sbjct: 16 LTDACNFCCPYCRPAEITPQSQHQLLSVDEWMTILGAFHQ-VGVKAVRLTGGEPLLYP-- 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
++++L ++ + + + ++ P R ++ L + + + +
Sbjct: 73 HIEELLARIKQTGWFEDISMTTNGSLLAP-RATK--LKELGLNRVNISLDSLDSDAFALC 129
Query: 221 -------EEAIAAISRLANAGII-LLSQSVLLKGINDD 250
+ + I +AG + +VL + DD
Sbjct: 130 VGKANQLDSVLNGIQSAIDAGFTSVKINTVLSRHWTDD 167
>gi|242014079|ref|XP_002427725.1| molybdopterin cofactor synthesis protein A, putative [Pediculus
humanus corporis]
gi|212512166|gb|EEB14987.1| molybdopterin cofactor synthesis protein A, putative [Pediculus
humanus corporis]
Length = 569
Score = 39.9 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 48/119 (40%), Gaps = 6/119 (5%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
+D + + G H Y L C + C +C E V + L + D
Sbjct: 47 DDAAQKHPLTDNFGRFHTYLRISL---TEKCNLRCNYCMPEEGVHLSHRSNLLTTDEILK 103
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV-QILRFHSRVPIVDPQRI 192
L+ + + I ++ TGG+P I L +++ L+ +K + + + + ++ Q +
Sbjct: 104 LSELFVRQGIKKIRLTGGEPTIRKD--LSALIRGLKKLKGLTEGVSITTNGLVLTKQLV 160
>gi|158521211|ref|YP_001529081.1| radical SAM domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158510037|gb|ABW67004.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
Length = 306
Score = 39.9 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 53/172 (30%), Gaps = 20/172 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+K + C C +C K ++ + + + + + EV +GG+P +
Sbjct: 15 IKANYTCNSNCVYCCAGN---RGKQRAMTFDEIAENIQFFIDTYGVQEVCLSGGEPTVHR 71
Query: 159 H--KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
L V LR H +RFH R L +
Sbjct: 72 DFLSTLDFVRSKGLRTYLHTNGIRFHDRTFAKQ--------CAALVNRTLVGFSFHTPGL 123
Query: 216 PYEFSEEAIAAISR------LANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E + A R L + L + +V++K + +L+ +
Sbjct: 124 CAELTGSAKTFGQRIDGIANLLAESVPLRTNTVIIKQNYRHLPAIVDLISSL 175
>gi|253701529|ref|YP_003022718.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M21]
gi|251776379|gb|ACT18960.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M21]
Length = 326
Score = 39.9 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQI 144
++ Y RI + C + C +C + V + +LS ++ I
Sbjct: 3 LIDTYGRRINYLRLSVTDRCNMRCSYCMPAQGVEKLEHKEMLSYEELYRVAGACIA-QGI 61
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++ TGG+PL+ K L L+ L + ++ L +
Sbjct: 62 EKIRVTGGEPLVR--KGLVPFLERLSRVPGLKELVLTTNGL 100
>gi|93005542|ref|YP_579979.1| molybdenum cofactor biosynthesis protein A [Psychrobacter
cryohalolentis K5]
gi|92393220|gb|ABE74495.1| GTP cyclohydrolase subunit MoaA [Psychrobacter cryohalolentis K5]
Length = 367
Score = 39.9 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C G LS + + + +V TGG+P I
Sbjct: 61 ITDFCNFRCEYCLPNGYQGKPPQDELSVAEIATLIRGFAQ-VGTKKVRITGGEPSIRRDV 119
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++KT++ + ++ + S
Sbjct: 120 V--DIIKTIKNTEGIETVAMTSNG 141
>gi|315651093|ref|ZP_07904127.1| radical SAM domain protein [Eubacterium saburreum DSM 3986]
gi|315486683|gb|EFU77031.1| radical SAM domain protein [Eubacterium saburreum DSM 3986]
Length = 351
Score = 39.9 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 36/119 (30%), Gaps = 19/119 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-------FTG 151
+ C C+ C+ + L S + E TG
Sbjct: 9 WHITDECDQRCKHCY---IFSGGNYNCLKSMSWQEMQDTFNNCLDFCETYGRTPYFYLTG 65
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GDP++ L L +++ + +P +N ++ + LKE G Y
Sbjct: 66 GDPILHPD---FWKLLELFSENNIKF------TIMGNPFHLNDDVCKKLKEYGCEKYQM 115
>gi|283457512|ref|YP_003362094.1| molybdenum cofactor biosynthesis protein [Rothia mucilaginosa
DY-18]
gi|283133509|dbj|BAI64274.1| molybdenum cofactor biosynthesis enzyme [Rothia mucilaginosa DY-18]
Length = 403
Score = 39.9 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 70/205 (34%), Gaps = 15/205 (7%)
Query: 101 LLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C + K +LS+++ + + E+ FTGG+PL+ +
Sbjct: 71 LTDKCNLRCIYCMPADGLQWLPKENLLSAEEIARLADIAITELGVEEIRFTGGEPLVRAD 130
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA-NHPYE 218
L ++ + L + ++ + + V + E
Sbjct: 131 --LVDIISRIHQAHPDVPLAITTNGIGLEKR---AAALAEAGLTRINVSLDTICRETFAE 185
Query: 219 FS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+ + + I A AG + +VL+ G+NDD L+R + + ++
Sbjct: 186 LTRRDKLDAVLKGIDGAAEAGLWPIKINAVLMPGLNDDQ--APELLRWALAGGYQLRFIE 243
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASL 297
L A R +I L
Sbjct: 244 QMPLDADNRWTREGTITAAEIREKL 268
>gi|239905510|ref|YP_002952249.1| hypothetical protein DMR_08720 [Desulfovibrio magneticus RS-1]
gi|239795374|dbj|BAH74363.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 364
Score = 39.9 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
P G Y + + +VC CRFC + G+ G LS
Sbjct: 37 APLHDLCAAAMEARLQKHGRNAYYVHNVHVNFTNVCVNACRFCAFYKKHGAPGGRTLSVD 96
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
D A LA + I E+ GG + L+ L LR +
Sbjct: 97 DIVADLA-AKSHLPIREIHIVGG---LNPELPLEYYLDMLRAV 135
>gi|39998236|ref|NP_954187.1| molybdenum cofactor biosynthesis protein A [Geobacter
sulfurreducens PCA]
gi|59798352|sp|Q747W9|MOAA_GEOSL RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|39985182|gb|AAR36537.1| molybdenum cofactor biosynthesis protein A, putative [Geobacter
sulfurreducens PCA]
gi|298507174|gb|ADI85897.1| pyranopterin triphosphate synthase [Geobacter sulfurreducens KN400]
Length = 326
Score = 39.9 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 10/107 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E V G +LS +D I ++ TGG+PL+
Sbjct: 18 VTDRCNLRCSYCMPAEGVEKLAHGDILSYEDLFRIAR-AAVAIGIEKIRITGGEPLVR-- 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
K + L + I+ ++ L + ++ PE+ L+ AG
Sbjct: 75 KGIVPFLARIAAIEGLRQLVLTTNGLLL------PEMAADLRSAGVQ 115
>gi|258424004|ref|ZP_05686886.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9635]
gi|257845625|gb|EEV69657.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9635]
Length = 448
Score = 39.9 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S+ E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLV--NSEYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|238753337|ref|ZP_04614700.1| Molybdenum cofactor biosynthesis protein A [Yersinia ruckeri ATCC
29473]
gi|238708290|gb|EEQ00645.1| Molybdenum cofactor biosynthesis protein A [Yersinia ruckeri ATCC
29473]
Length = 327
Score = 39.9 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + + L+ + ++ TGG+P +
Sbjct: 20 ITDVCNFRCTYCLPDGYQPNGVKSFLTLDEIRRVGRAFAA-LGTEKIRLTGGEPSMRRD- 77
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ LR ++ L +
Sbjct: 78 -FPDIIAALRENPAIRTLAVTTNG 100
>gi|150390794|ref|YP_001320843.1| RNA modification protein [Alkaliphilus metalliredigens QYMF]
gi|149950656|gb|ABR49184.1| RNA modification enzyme, MiaB family [Alkaliphilus metalliredigens
QYMF]
Length = 433
Score = 39.9 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 14/111 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + + + + EV+ TG
Sbjct: 141 KTRAFLKIQEGCNQYCAYCIIPYARGPIRSR--GKIEIIQEVQTLVNN-GFKEVVLTGIH 197
Query: 152 -----GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
D L L VLK + I+ ++ +R S P + L
Sbjct: 198 VASYGKD---LGDHEGLLDVLKRVNAIEGLERIRLSSLEPTLFSDAFLSAL 245
>gi|313149231|ref|ZP_07811424.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137998|gb|EFR55358.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 346
Score = 39.9 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 26/157 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV--IFTGG 152
++ + C + C+ C + + ++D + I EV I TGG
Sbjct: 18 RQLFWECTLRCNLACKHCGSDCR-KMSEQKDMPAEDFLRVIDSITPHVNPNEVNIIITGG 76
Query: 153 DPLILSHKRLQKVLKTL--RYIK--------HVQILRFHSRVPIVDPQRINPEL------ 196
+PL+ + L+KV L R ++ R S + + L
Sbjct: 77 EPLMRND--LEKVGLALYRRGYPWGIVSNGLYLTRERLDSLMAAGLHA-VTISLDGFAEE 133
Query: 197 IQCLK----EAGKPVYIAIHANHPYEFSEEAIAAISR 229
L+ K + H E + + + ++R
Sbjct: 134 HNWLRGNPDSYEKALEAIKMLVHEPELTWDVVTCVNR 170
>gi|310779097|ref|YP_003967430.1| molybdenum cofactor biosynthesis protein A [Ilyobacter polytropus
DSM 2926]
gi|309748420|gb|ADO83082.1| molybdenum cofactor biosynthesis protein A [Ilyobacter polytropus
DSM 2926]
Length = 315
Score = 39.9 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C + C +C E + +++ + + A + +V FTGG+PL+
Sbjct: 16 LTENCNLRCIYCKPDECIEARRDPMTKREVVSMVKAM--ADLGVKKVRFTGGEPLLRKD- 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVP 185
+ +++ + I+ + + +
Sbjct: 73 -ITEIISEVSKIEGIDDIALTTNGI 96
>gi|300694498|ref|YP_003750471.1| radical_sam domain [Ralstonia solanacearum PSI07]
gi|299076535|emb|CBJ35860.1| conserved hypothethical protein, radical_SAM domain [Ralstonia
solanacearum PSI07]
Length = 398
Score = 39.9 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 80/210 (38%), Gaps = 41/210 (19%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDTEAALAYIQEK-----SQIW 145
++ +LK++ C + C +C+ G +S + + I E Q +
Sbjct: 20 NQAILKVVQRCNLDCTYCY-VYNRGDDSWKTRLPVISDRVIDKLAERINEHCARFALQSF 78
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR---YIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ GG+PL+L +R+++++ LR H+ + ++D + I+ L+ L+
Sbjct: 79 TIEIHGGEPLLLGKRRMREMVDRLRSQVDATHL-RFTMQTNGLLLDSEWID--LLARLE- 134
Query: 203 AGKPVYIAIHANHPYEF--------------SEEAIAAISRLANAGIILLSQSVLLKGI- 247
V+ I + P E+ +++ + I L G L Q LL G
Sbjct: 135 ----VFFGISLDGPPEYADRYRIMRKGRGGSTQKLLDVIRGLRQDG-PLFDQ--LLGGCL 187
Query: 248 --NDDPEILANLMRTFVELRIKPYYLHHPD 275
+ L+ FVE + PD
Sbjct: 188 CVVNPDIDGGELVDWFVENGFNSFDFLLPD 217
>gi|291539696|emb|CBL12807.1| MiaB-like tRNA modifying enzyme [Roseburia intestinalis XB6B4]
Length = 435
Score = 39.9 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 23/128 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ E L I KS EV+ TG
Sbjct: 143 HTRAFIKVQDGCNQFCSYC-----IIPFARGRVRSRKMEDVLNEINELAKSGYKEVVLTG 197
Query: 152 GDPLILSH------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ LS + L +++ + I+ ++ +R S ++P+ + + + L E K
Sbjct: 198 ---IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK 250
Query: 206 PVYIAIHA 213
I H
Sbjct: 251 ---ICPHF 255
>gi|53713716|ref|YP_099708.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
gi|60681987|ref|YP_212131.1| putative oxidoreductase [Bacteroides fragilis NCTC 9343]
gi|81314949|sp|Q5LCF8|RIMO_BACFN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|81382384|sp|Q64TK5|RIMO_BACFR RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|52216581|dbj|BAD49174.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
gi|60493421|emb|CAH08207.1| putative oxidoreductase [Bacteroides fragilis NCTC 9343]
Length = 432
Score = 39.9 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 21/144 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + + L ++++ + I V+ +R H P EL + ++E Y+
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPEELFRVMRERDNVCKYM 249
Query: 210 AIHANHPYEFSEEAIAAISRLANA 233
I H + + R+
Sbjct: 250 DIALQHI------SDNMLQRMRRH 267
>gi|312195058|ref|YP_004015119.1| molybdenum cofactor biosynthesis protein A [Frankia sp. EuI1c]
gi|311226394|gb|ADP79249.1| molybdenum cofactor biosynthesis protein A [Frankia sp. EuI1c]
Length = 357
Score = 39.9 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 74/210 (35%), Gaps = 21/210 (10%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E V +L+ + + E+ + EV TGG+P + +
Sbjct: 47 LTDRCTLRCTYCMPAEGVPWLPGTAILTDDEVVRLVRIAVERLGVTEVRLTGGEPTLRPN 106
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIH---- 212
L +++ L ++ L + + L+ AG V +
Sbjct: 107 --LVELVGRLAALRPRPELSLTTNGLTLARS------AGALRSAGLDRVNVSLDTTDPAR 158
Query: 213 ---ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
+S+ + + +VL +G+N+D L+R +E +
Sbjct: 159 FRAITRRDRWSDVVAGLAAAAEAGLRPVKVNAVLTRGVNED--EAPTLLRWCLERGYEAR 216
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
++ L A R ++ +I+ +L+
Sbjct: 217 FIEQMPLDAQHGWDRASMVTAAEILTALRA 246
>gi|257126723|ref|YP_003164837.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Leptotrichia buccalis C-1013-b]
gi|257050662|gb|ACV39846.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Leptotrichia buccalis C-1013-b]
Length = 175
Score = 39.9 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
+ + GI RY C C C + G +L+ + E I E
Sbjct: 27 KETIVDGIGLRY-----SLYFAGCSHACPGCHNEYSWNPKHGNILTYEKLEEIAKEINEN 81
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ + + +GGDPL + L KVLK L+
Sbjct: 82 TLLDGITISGGDPLFNPVEML-KVLKFLKE 110
>gi|332528805|ref|ZP_08404782.1| molybdenum cofactor biosynthesis protein A [Hylemonella gracilis
ATCC 19624]
gi|332041871|gb|EGI78220.1| molybdenum cofactor biosynthesis protein A [Hylemonella gracilis
ATCC 19624]
Length = 367
Score = 39.9 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G +L+ ++ + ++ TGG+PL
Sbjct: 35 VTDRCNFRCSYCMPKEVFTKDYPYLPHGDLLTFEEIARLARAFVS-LGVRKIRLTGGEPL 93
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + ++ +++ L I
Sbjct: 94 LRKN--IEALIEQLADI 108
>gi|269837323|ref|YP_003319551.1| MiaB-like tRNA modifying enzyme [Sphaerobacter thermophilus DSM
20745]
gi|269786586|gb|ACZ38729.1| MiaB-like tRNA modifying enzyme [Sphaerobacter thermophilus DSM
20745]
Length = 449
Score = 39.9 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 70/248 (28%), Gaps = 36/248 (14%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KD 130
R D S R ++K+ C +C +C G+ + + +
Sbjct: 127 GRLDWENQAFDSDEPVEHVETRTRRMIKIQEGCRAHCTYCIIPRARGAPRNVAPAEVVRR 186
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHK------RLQKVLKTLRYIKHVQILRFHSRV 184
+ A+ EV+ TG RL +L+ + ++ LR S
Sbjct: 187 VQEAID-----EGYREVVLTGTHVGTYKWPEGDRTLRLADLLELVLEATTIERLRVTS-- 239
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF----------SEEAIAAISRLANAG 234
V P I+ I + ++ + E + + A+ RL
Sbjct: 240 --VGPHEIDERFIALVNHPRMAPHLHMALQSGSETVLRRMKRWYNTRQFRRAVRRLREEV 297
Query: 235 IILLSQSVLLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDL--------AAGTSHFRL 285
+ + ++ G + E A E+ ++ H R+
Sbjct: 298 PDIAITTDVIVGFPGETDEEFAETCDFVREMGFAKLHVFPFSPRKDTPAAAMPDQVHPRV 357
Query: 286 TIEEGQKI 293
++
Sbjct: 358 KERRAAEL 365
>gi|257064192|ref|YP_003143864.1| pyruvate-formate lyase-activating enzyme [Slackia
heliotrinireducens DSM 20476]
gi|256791845|gb|ACV22515.1| pyruvate-formate lyase-activating enzyme [Slackia
heliotrinireducens DSM 20476]
Length = 201
Score = 39.9 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ C C C E+ + + + AL + + S + FTGGD
Sbjct: 15 PGSRIVVWTVGCSKRCPGCANPELWEASDANRIDNDQLAEALVRMAKASGTRAITFTGGD 74
Query: 154 PLILSHKRLQKVLKTLR 170
PL L VL+++R
Sbjct: 75 PLEQPDD-LAWVLRSIR 90
>gi|224370662|ref|YP_002604826.1| MoaA2 [Desulfobacterium autotrophicum HRM2]
gi|223693379|gb|ACN16662.1| MoaA2 [Desulfobacterium autotrophicum HRM2]
Length = 324
Score = 39.9 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS-KDTEAALAYIQEKSQIWEVIF 149
H + + + + C + C +C ++ + ++ ++ + I + I +V
Sbjct: 4 HSKVNYLRISVTDRCNLACCYCVPKDQLPLLTHRDIARYEEILRIIQ-ISCRLGITKVRI 62
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
TGG+PL+ + + ++T+ ++ +Q L + ++
Sbjct: 63 TGGEPLVR--RGIVDFIETVAKLEEIQDLSITTNGVLLQKN 101
>gi|220912213|ref|YP_002487522.1| molybdenum cofactor biosynthesis protein A [Arthrobacter
chlorophenolicus A6]
gi|219859091|gb|ACL39433.1| molybdenum cofactor biosynthesis protein A [Arthrobacter
chlorophenolicus A6]
Length = 380
Score = 39.9 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G+ RY R L L C + C +C E + K V+++++ + E+
Sbjct: 32 GLADRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLAKQAVMTAEEIVRIVRIGVEQLG 91
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ E+ TGG+PL+ L ++ LR
Sbjct: 92 VRELRLTGGEPLVRHD--LVDIISALRS 117
>gi|322807272|emb|CBZ04846.1| miab family protein, possibly involved in tRNA or rRNAmodification
[Clostridium botulinum H04402 065]
Length = 432
Score = 39.9 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 19/134 (14%)
Query: 93 YPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
Y D R LK+ C +C +C G+ + + + + E+I +
Sbjct: 138 YRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKP--EKIMEEVKKLSKH-GFKEIILS 194
Query: 151 GGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--- 202
G D L +L+ + ++ ++ +R S P E I + +
Sbjct: 195 GIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGSIDPTF----FTEEEIIRISKLKR 250
Query: 203 --AGKPVYIAIHAN 214
+ + N
Sbjct: 251 FCPHFHLSLQSGCN 264
>gi|168179386|ref|ZP_02614050.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
2916]
gi|182669715|gb|EDT81691.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
2916]
Length = 432
Score = 39.9 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 19/134 (14%)
Query: 93 YPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
Y D R LK+ C +C +C G+ + + + + E+I +
Sbjct: 138 YRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKP--EKIMEEVKKLSKH-GFKEIILS 194
Query: 151 GGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--- 202
G D L +L+ + ++ ++ +R S P E I + +
Sbjct: 195 GIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGSIDPTF----FTEEEIIRISKLKR 250
Query: 203 --AGKPVYIAIHAN 214
+ + N
Sbjct: 251 FCPHFHLSLQSGCN 264
>gi|145588575|ref|YP_001155172.1| molybdenum cofactor biosynthesis protein A [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145046981|gb|ABP33608.1| GTP cyclohydrolase subunit MoaA [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 371
Score = 39.9 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 12/96 (12%)
Query: 86 LKGIVHRYPDRIL----LKLLHVCPVYCRFCFRRE-----MVGSQKGTVLSSKDTEAALA 136
G R+L + + C C +C +E +LS ++ +
Sbjct: 27 PHGRTQDTRGRVLRDLRISVTDRCNFRCTYCMPKEVFDQNYPYLAHQELLSFEEITRLTS 86
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
I + ++ TGG+PL+ + L+ +++ L I
Sbjct: 87 -IFSSLGVEKIRLTGGEPLLRKN--LEILIEMLAKI 119
>gi|294789009|ref|ZP_06754249.1| molybdenum cofactor biosynthesis protein A [Simonsiella muelleri
ATCC 29453]
gi|294483111|gb|EFG30798.1| molybdenum cofactor biosynthesis protein A [Simonsiella muelleri
ATCC 29453]
Length = 324
Score = 39.9 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ +C C +C G K L+ + E +A + ++ TGG+P + +
Sbjct: 18 ITDLCNYRCNYCLPNGYQGKAKPDELTLPEIETLVAVFAQN-GTRKIRLTGGEPTLRAD- 75
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ R +Q + +
Sbjct: 76 -LPDIIAACRANPEIQHIALTTNAF 99
>gi|295094543|emb|CBK83634.1| iron-only hydrogenase maturation protein HydG [Coprococcus sp.
ART55/1]
Length = 472
Score = 39.9 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 8/128 (6%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLS 127
E D I + + Y +RI++ + C C +C L+
Sbjct: 59 CEMPDKINEIYDLAEQIKKDFYGNRIVMFAPLYLSNYCVNGCVYCPYHIKNKHIARKKLT 118
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSR 183
++ + +Q+ I G DP + + + + + T+ IKH ++ + +
Sbjct: 119 QEEVRREVIALQDMGHKRLAIEAGEDPQMNPIEYILECIDTIYSIKHKNGAIRRVNVNIA 178
Query: 184 VPIVDPQR 191
V+ R
Sbjct: 179 ATTVENYR 186
>gi|253565664|ref|ZP_04843119.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265764040|ref|ZP_06092608.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
gi|251945943|gb|EES86350.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263256648|gb|EEZ27994.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
Length = 432
Score = 39.9 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 21/144 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + + L ++++ + I V+ +R H P EL + ++E Y+
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPEELFRVMRERDNVCKYM 249
Query: 210 AIHANHPYEFSEEAIAAISRLANA 233
I H + + R+
Sbjct: 250 DIALQHI------SDNMLQRMRRH 267
>gi|108801200|ref|YP_641397.1| radical SAM family protein [Mycobacterium sp. MCS]
gi|119870351|ref|YP_940303.1| radical SAM domain-containing protein [Mycobacterium sp. KMS]
gi|126437180|ref|YP_001072871.1| radical SAM domain-containing protein [Mycobacterium sp. JLS]
gi|108771619|gb|ABG10341.1| Radical SAM [Mycobacterium sp. MCS]
gi|119696440|gb|ABL93513.1| Radical SAM domain protein [Mycobacterium sp. KMS]
gi|126236980|gb|ABO00381.1| Radical SAM domain protein [Mycobacterium sp. JLS]
Length = 514
Score = 39.9 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 58/159 (36%), Gaps = 11/159 (6%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P K +P DPI L + ++ +L + C + C CF +
Sbjct: 77 PTKVHTPDVP-GNFDPIPQAYLRGLPEMQTQHTCILLQDISDTCNLRCPTCFTESSPDLR 135
Query: 122 KGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
++ + + L +E ++ V+ +GG+P + RL ++L L + +
Sbjct: 136 NVVPVAEVLANVDQRLR--RENGRLDVVMLSGGEPTLHP--RLAELLTELVDRP-ITRIL 190
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
++ + + L+ L + V + + + E
Sbjct: 191 VNTNGVRIAT---DDALLDLLTAHRERVEVYLQYDGLSE 226
>gi|195440184|ref|XP_002067922.1| GK11297 [Drosophila willistoni]
gi|194164007|gb|EDW78908.1| GK11297 [Drosophila willistoni]
Length = 389
Score = 39.9 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y L C + C +C E V Q + L S + LA I + + ++
Sbjct: 70 GRHHTYLRISL---TERCNLRCDYCMPAEGVPLQPKSHLLSNEELIRLARIFVEQGVRKI 126
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
TGG+P I + ++ ++ + ++ + + ++
Sbjct: 127 RLTGGEPTIRRD--IVDIVAEMKALPQLEHIGITTNGLVL 164
>gi|40063022|gb|AAR37878.1| molybdenum cofactor biosynthesis protein A [uncultured marine
bacterium 560]
Length = 331
Score = 39.9 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 22/162 (13%)
Query: 101 LLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C C +C + + VLS ++ + E + +V TGG+PL+
Sbjct: 19 VTDHCNYRCHYCRDEDHQTHTTRSEVLSFEEIVKIVRLFAE-LGVTKVRLTGGEPLLRRD 77
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP--- 216
+ + + L I + + + + P LK G + I +
Sbjct: 78 --ILDLTRMLGDIPGLTEIPLSTNA------HLLPSFAGKLKNHGIN-RVNISIDSLIPE 128
Query: 217 --YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + + I I AG+ + V++KGIND+
Sbjct: 129 RFKEITRDGDLAKVIKGIDAAIAAGMSPVKLNMVVMKGINDE 170
>gi|4104517|gb|AAD02057.1| unknown [Clostridium acetobutylicum DSM 1731]
Length = 386
Score = 39.9 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 21/128 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SK+ E + I+ + E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCSYCL-----IPYARGGVCSKNPEKVIGEIKRLAEHGFKEIILSG 195
Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GD L L +++ I ++ +R S ++P+ + + I +K K
Sbjct: 196 IHIASYGDDLK-GDWNLISIIEKAEQIDGIERIRIGS----IEPRFFDEDTISKIKNMKK 250
Query: 206 PVYIAIHA 213
+ H
Sbjct: 251 ---MCPHF 255
>gi|15894568|ref|NP_347917.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824]
gi|15024215|gb|AAK79257.1|AE007641_3 Fe-S oxidoreductases [Clostridium acetobutylicum ATCC 824]
gi|325508700|gb|ADZ20336.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018]
Length = 436
Score = 39.9 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 21/128 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SK+ E + I+ + E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCSYCL-----IPYARGGVCSKNPEKVIGEIKRLAEHGFKEIILSG 195
Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GD L L +++ I ++ +R S ++P+ + + I +K K
Sbjct: 196 IHIASYGDDLK-GDWNLISIIEKAEQIDGIERIRIGS----IEPRFFDEDTISKIKNMKK 250
Query: 206 PVYIAIHA 213
+ H
Sbjct: 251 ---MCPHF 255
>gi|255011415|ref|ZP_05283541.1| putative radical SAM-family protein [Bacteroides fragilis 3_1_12]
Length = 361
Score = 39.9 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 26/157 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV--IFTGG 152
++ + C + C+ C + + ++D + I EV I TGG
Sbjct: 33 RQLFWECTLRCNLACKHCGSDCR-KMSEQKDMPAEDFLRVIDSITPHVNPNEVNIIITGG 91
Query: 153 DPLILSHKRLQKVLKTL--RYIK--------HVQILRFHSRVPIVDPQRINPEL------ 196
+PL+ + L+KV L R ++ R S + + L
Sbjct: 92 EPLMRND--LEKVGLALYRRGYPWGIVSNGLYLTRERLDSLMAAGLHA-VTISLDGFAEE 148
Query: 197 IQCLK----EAGKPVYIAIHANHPYEFSEEAIAAISR 229
L+ K + H E + + + ++R
Sbjct: 149 HNWLRGNPDSYEKALEAIKMLVHEPELTWDVVTCVNR 185
>gi|25027857|ref|NP_737911.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
efficiens YS-314]
gi|259506248|ref|ZP_05749150.1| molybdopterin cofactor biosynthesis protein A [Corynebacterium
efficiens YS-314]
gi|23493140|dbj|BAC18111.1| putative molybdopterin biosynthesis protein MoaA2 [Corynebacterium
efficiens YS-314]
gi|259166152|gb|EEW50706.1| molybdopterin cofactor biosynthesis protein A [Corynebacterium
efficiens YS-314]
Length = 381
Score = 39.9 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 77/213 (36%), Gaps = 27/213 (12%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + LS +T + EK I ++ FTGG+PL+ +
Sbjct: 61 LTDRCNLRCTYCMPAEGLEWMPTEQTLSDAETIRLIRIAVEKLGIRQIRFTGGEPLLRKN 120
Query: 160 KRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
L+ ++ ++ + + + + I L+EAG + I +
Sbjct: 121 --LEDIISATTALRTDEGETVRTALTTNGLGL------DKRIVGLREAGLH-RVNISLDT 171
Query: 216 PYEFSEEAIAAISRLA----------NAGI-ILLSQSVLLKGINDDPEILANLMRTFVEL 264
++ RL+ +G+ + +V++ G+N+ + L +EL
Sbjct: 172 IDAQRYLSLTRRDRLSGVLSSIEAAVASGMQPVKVNAVVMPGVNE--VDIVPLASYCLEL 229
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+ ++ L R + +I L
Sbjct: 230 GAQLRFIEQMPLGPREQWRRGDMVTAAQIFERL 262
>gi|302333252|gb|ADL23445.1| radical SAM domain protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 448
Score = 39.9 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|196234696|ref|ZP_03133509.1| molybdenum cofactor biosynthesis protein A [Chthoniobacter flavus
Ellin428]
gi|196221244|gb|EDY15801.1| molybdenum cofactor biosynthesis protein A [Chthoniobacter flavus
Ellin428]
Length = 337
Score = 39.9 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 75/220 (34%), Gaps = 31/220 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI------WEVIFTGGDP 154
+ C C +C +E+ G + + I ++I ++ TGG+P
Sbjct: 20 VTDRCNFRCTYCMPKEVFGHGYDFLPKEEVLT--FEEIARLARIFVELGAEKLRLTGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ + L +++ L I+ V L + R+ E + L+ AG + + +
Sbjct: 78 TLR--RELHRLVSELAAIRGVHDLTLTTNGS-----RLVEE-ARNLRNAGLQ-RLTVSVD 128
Query: 215 HPYEFS-----------EEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFV 262
+ + + I AG + V+ +G+N+ + + R F
Sbjct: 129 ALDDVTFRAMNDVSFPVHRVLRGIEAAREAGFAPIKINMVVKRGVNEAQ--IVPMARHFR 186
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
++ + D+ + +IVA + +
Sbjct: 187 GPDSILRFIEYMDVGNTNGWHMADVVPAAEIVARISAALP 226
>gi|162453511|ref|YP_001615878.1| hypothetical protein sce5235 [Sorangium cellulosum 'So ce 56']
gi|161164093|emb|CAN95398.1| hypothetical protein sce5235 [Sorangium cellulosum 'So ce 56']
Length = 423
Score = 39.9 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 10/115 (8%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P + E R D G + + R +L + + C C FCF + +
Sbjct: 116 VPTRHEEITAEAFRLDDAGLIDWAQC-----RPRSISVLPVANACQARCAFCFSKA--SA 168
Query: 121 QKGTVLSSKDTEAALAYIQEKSQI---WEVIFTGGDPLILSHKRLQKVLKTLRYI 172
S E L + + + VI GG+P +L +RL+ +++ L +
Sbjct: 169 SDLARQQSATLERYLDWARRAKERGAERAVITGGGEPTLLEPERLRALVRGLSEL 223
>gi|149203904|ref|ZP_01880872.1| radical SAM domain protein [Roseovarius sp. TM1035]
gi|149142346|gb|EDM30391.1| radical SAM domain protein [Roseovarius sp. TM1035]
Length = 321
Score = 39.9 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 58/156 (37%), Gaps = 14/156 (8%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTG 151
+P+ + +C + CR C+ + +S + L ++ + + E+ FTG
Sbjct: 37 HPETLWFNTGTLCNIECRNCYILSSPSNDALVYISESEVRDYLGQVRARGWPLREIAFTG 96
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+P ++ + + L V IL R + R L+ K G+ + + I
Sbjct: 97 GEPF-MNPEMIGMARAALEAGFEVLILTNAMRPMMRKTMR--AGLLDLGKTWGEKLTLRI 153
Query: 212 HANHPYE----------FSEEAIAAISRLANAGIIL 237
+H E + + + L + GI +
Sbjct: 154 SVDHWSEALHDEERGAGAFAKTLEGMCWLRDNGIRM 189
>gi|282908895|ref|ZP_06316713.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|283958340|ref|ZP_06375791.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|282327159|gb|EFB57454.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|283790489|gb|EFC29306.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
A017934/97]
Length = 448
Score = 39.9 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|255526666|ref|ZP_05393571.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
gi|296187171|ref|ZP_06855568.1| radical SAM domain protein [Clostridium carboxidivorans P7]
gi|255509646|gb|EET85981.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
gi|296048206|gb|EFG87643.1| radical SAM domain protein [Clostridium carboxidivorans P7]
Length = 454
Score = 39.9 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL + ++ Y + L + H C + C++CF E
Sbjct: 65 IKELIEQEVLYSKDLYEDIA-LNSNKTPSYIKALCLNVAHDCNLRCKYCFADEGDYKGCR 123
Query: 124 TVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQIL 178
++S++ + A+ ++ +KS EV + GG+PL ++ +++V++ + + H + +
Sbjct: 124 ELMSAEIAKKAIDFVIKKSGPRKNIEVDWFGGEPL-MAFNVIKEVMEYTKEQEKIHNKNI 182
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
RF + +N E++ L + + + + E +++ +
Sbjct: 183 RFT---MTTNATLLNDEIMDYLDKNMGNIIL--SIDGRKEVNDKVRVRVD 227
>gi|170782849|ref|YP_001711183.1| molybdenum cofactor biosynthesis protein A [Clavibacter
michiganensis subsp. sepedonicus]
gi|169157419|emb|CAQ02608.1| molybdenum cofactor biosynthesis protein A [Clavibacter
michiganensis subsp. sepedonicus]
Length = 361
Score = 39.9 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + + L + E + + +V FTGG+PL+
Sbjct: 42 LTDRCNLRCTYCMPAEGLPFTPDRQALQLAEIERLVRIGTRDLGVRQVRFTGGEPLLRRD 101
Query: 160 KRLQKVLKTLRYIK 173
L +++ +
Sbjct: 102 --LIEIIAACAALP 113
>gi|81300091|ref|YP_400299.1| molybdenum cofactor biosynthesis protein A [Synechococcus elongatus
PCC 7942]
gi|3024146|sp|Q56211|MOAA_SYNE7 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|1480154|emb|CAA67948.1| moaA [Synechococcus elongatus PCC 7942]
gi|81168972|gb|ABB57312.1| GTP cyclohydrolase subunit MoaA [Synechococcus elongatus PCC 7942]
Length = 327
Score = 39.9 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 101 LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L VC C +C + + + Q+ +L+ + + I +V TGG+P + S
Sbjct: 19 LTDVCNFRCGYCLPKGQQLDPQRPALLTLPEIRHLIEGFVA-LGIEKVRLTGGEPTLRSD 77
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRV 184
L +++ + + ++ + S
Sbjct: 78 --LVDIVRAVAAVPGIRRVALTSNG 100
>gi|119718600|ref|YP_925565.1| radical SAM domain-containing protein [Nocardioides sp. JS614]
gi|119539261|gb|ABL83878.1| Radical SAM domain protein [Nocardioides sp. JS614]
Length = 381
Score = 39.9 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 73/199 (36%), Gaps = 27/199 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGG 152
P + ++ C + CR C R + L+++ +A L I + + V+ TGG
Sbjct: 23 PLITIWEVTRACALVCRHC-RADAQTRADPRQLTTEQGKALLDDIAGFGKPYPIVVLTGG 81
Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
DP L + L H + R+ P+++ L+ AG V +++
Sbjct: 82 DPFERPDLAELVRYGTALG---------LHVALSPSVTPRLTPDVLAELRAAG-AVAMSL 131
Query: 212 HANHPYEFS-----------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
+ + E+ + A + AG L + + +G + L +++RT
Sbjct: 132 SLDGAVAETHDSFRGVPGVFEDTLRAARWVKEAGFRLQVNTTVTQG---NVHELPDVLRT 188
Query: 261 FVELRIKPYYLHHPDLAAG 279
++L + +
Sbjct: 189 VIDLGASLWSVFFLVPTGR 207
>gi|329314252|gb|AEB88665.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
aureus T0131]
Length = 448
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|323699272|ref|ZP_08111184.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. ND132]
gi|323459204|gb|EGB15069.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio desulfuricans
ND132]
Length = 442
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 57/176 (32%), Gaps = 26/176 (14%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGS 120
EE+ P + + P LK+ C CRFC R
Sbjct: 115 EEIEQWPAMAARALALRLTGDTPRSLSTGPSYAYLKVSEGCSHNCRFCTIPSIRGPHRSW 174
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP-LILSH----KRLQKVLKTLRYIKHV 175
+L+ A Q+ E+I G D S L +L+ L I +
Sbjct: 175 PVDFLLNEARLLAG--------QVPEIIVVGQDSTAYGSDLGPGNDLPTLLRGLAAIPDL 226
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISR 229
LR + P + L+ L++ G P Y I H + + +A++ R
Sbjct: 227 HWLRI----MYLYPAGLTESLLGLLRDTGAPFLPYFDIPLQHAH---PDVLASMGR 275
>gi|313206128|ref|YP_004045305.1| radical sam domain protein [Riemerella anatipestifer DSM 15868]
gi|312445444|gb|ADQ81799.1| Radical SAM domain protein [Riemerella anatipestifer DSM 15868]
gi|315022935|gb|EFT35958.1| Queuosine Biosynthesis QueE Radical SAM [Riemerella anatipestifer
RA-YM]
Length = 209
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 93 YPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
Y + + L C V C +C +E ++ +++ I ++ TG
Sbjct: 30 YTGKAAYFIRLGGCDVGCHWCDVKESWDPNLHPLMDAEEVAQ----IAANHS-KTIVLTG 84
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQI 177
G+PL+ + + L K LK L H++
Sbjct: 85 GEPLMWNLEILTKKLKDLGCTIHIET 110
>gi|312140564|ref|YP_004007900.1| molybdopterin biosynthesis protein moaa [Rhodococcus equi 103S]
gi|311889903|emb|CBH49220.1| molybdopterin biosynthesis protein MoaA [Rhodococcus equi 103S]
Length = 359
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 20/181 (11%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +L++ + + + I EV FTGG+PL+
Sbjct: 49 ITEKCSLRCTYCMPAEGLPAIPARDLLTADEIIRLVGVAVHRLGIREVRFTGGEPLMRRD 108
Query: 160 -KRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHP 216
+ + L I L + ++ + + + V + H
Sbjct: 109 LEVIVAGCSELVPGIP----LSMTTNAVGLEHRAVGLARAGL---SRVNVSLDTIDRRHF 161
Query: 217 YEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
E + E + I +AG L +VL+ D A+L++ ++ +
Sbjct: 162 AELTRRDRLESVLTGIRAAQDAGLAPLKINAVLMAETLDGA---ADLLQWCLDAGCALRF 218
Query: 271 L 271
+
Sbjct: 219 I 219
>gi|304436321|ref|ZP_07396298.1| MiaB family RNA modification enzyme [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304370676|gb|EFM24324.1| MiaB family RNA modification enzyme [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 442
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 90/300 (30%), Gaps = 58/300 (19%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+K+ C C FC + GS + +D A + + + E++ D
Sbjct: 145 TAYVKIAEGCDHRCAFCAIPLIRGSFRSR--PMEDIVAEGRELAA-AGVRELVLIAQDSA 201
Query: 156 ILS-----HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
L +L+ L I + +R P+ ELI+ K V Y+
Sbjct: 202 NYGLDCYQKPMLPTLLRELAKIDGIAWIRV----LYSYPKYFTDELIEVFATEPKVVKYV 257
Query: 210 AIHANHPYEF------SEEAIAAISRL---ANAGII-LLSQSVLLKGINDDPEILANLMR 259
+ H ++ + A + L A I + +S + G + + +R
Sbjct: 258 DLPLQHAHDAVLRSMNRPDTRAGMEELIAKLRARIPGVAIRSTFIVGFPGETDAQYQTLR 317
Query: 260 TFV------ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK--------------- 298
FV ++ I Y D AA +++ E Q+ L
Sbjct: 318 RFVEKQRFDKVGI-FTYSEEEDTAAAAMGKKVSEEVMQERYHDLMSLQSKISEEINIGLE 376
Query: 299 ------------EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ SG+ + P G++ I+ + + +D
Sbjct: 377 HQELDVLIEGHDAEQSGIAVGRSYREAPEVDGQIYIEGD-AEGAPGEIVRVRLLQGFTYD 435
>gi|291529131|emb|CBK94717.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale M104/1]
Length = 434
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 46/115 (40%), Gaps = 18/115 (15%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149
+ R +K+ C +C +C + + S+ E +A ++ + EV+
Sbjct: 140 KEHTRAFIKVQDGCNQFCSYC-----IIPYARGRVRSRRFENVIAEVERLAANGFKEVVL 194
Query: 150 TGGDPLILS--------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
TG + LS L ++++ + +K ++ +R S P + + EL
Sbjct: 195 TG---IHLSSYGVDFEEATGLLELIQAVNAVKGIERIRLGSLEPKIVTEHFASEL 246
>gi|56750280|ref|YP_170981.1| molybdenum cofactor biosynthesis protein A [Synechococcus elongatus
PCC 6301]
gi|81596776|sp|Q5N5F7|MOAA_SYNP6 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|56685239|dbj|BAD78461.1| molybdenum cofactor biosynthesis protein A [Synechococcus elongatus
PCC 6301]
Length = 327
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 101 LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L VC C +C + + + Q+ +L+ + + I +V TGG+P + S
Sbjct: 19 LTDVCNFRCGYCLPKGQQLDPQRPALLTLPEIRHLIEGFVA-LGIEKVRLTGGEPTLRSD 77
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRV 184
L +++ + + ++ + S
Sbjct: 78 --LVDIVRAVAAVPGIRRVALTSNG 100
>gi|49483824|ref|YP_041048.1| hypothetical protein SAR1653 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425701|ref|ZP_05602125.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428362|ref|ZP_05604760.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430999|ref|ZP_05607379.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257433687|ref|ZP_05610045.1| RNA modification protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257436601|ref|ZP_05612645.1| RNA modification protein [Staphylococcus aureus subsp. aureus M876]
gi|282904158|ref|ZP_06312046.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus C160]
gi|282905985|ref|ZP_06313840.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282911214|ref|ZP_06319016.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282914383|ref|ZP_06322169.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899]
gi|282919352|ref|ZP_06327087.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus C427]
gi|282924677|ref|ZP_06332345.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus C101]
gi|293503457|ref|ZP_06667304.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
58-424]
gi|293510474|ref|ZP_06669180.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus M809]
gi|293531014|ref|ZP_06671696.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015]
gi|295428154|ref|ZP_06820786.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590880|ref|ZP_06949518.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus MN8]
gi|49241953|emb|CAG40648.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271395|gb|EEV03541.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275203|gb|EEV06690.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278429|gb|EEV09065.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257281780|gb|EEV11917.1| RNA modification protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257283952|gb|EEV14075.1| RNA modification protein [Staphylococcus aureus subsp. aureus M876]
gi|282313512|gb|EFB43907.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus C101]
gi|282317162|gb|EFB47536.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus C427]
gi|282321564|gb|EFB51889.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899]
gi|282324909|gb|EFB55219.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282331277|gb|EFB60791.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595776|gb|EFC00740.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus C160]
gi|290920282|gb|EFD97348.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015]
gi|291095123|gb|EFE25388.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
58-424]
gi|291466838|gb|EFF09358.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus M809]
gi|295128512|gb|EFG58146.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575766|gb|EFH94482.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus MN8]
gi|312437955|gb|ADQ77026.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus TCH60]
gi|315195479|gb|EFU25866.1| hypothetical protein CGSSa00_07410 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 448
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|229087544|ref|ZP_04219676.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-44]
gi|228695791|gb|EEL48644.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-44]
Length = 361
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 69/218 (31%), Gaps = 28/218 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C R E + L+ + + + I E + ++F+GGD
Sbjct: 7 PFIVIWEVTRACELKCLHC-RAEAQYRRDPRELTFLEGKRLIDEIYEMDKPM-LVFSGGD 64
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPIVDPQRINPELIQCLKEAGKPVYIA 210
PL+ + L + LR S P V + I L V A
Sbjct: 65 PLMRED------IYELADYAVQKGLRVSMTPSATPNVTKEAIQKAKEVGLARWAFSVDGA 118
Query: 211 IHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
H + + +AI ++ L I + + + K + E +A L+
Sbjct: 119 TAETHDRFRGVAGSFQLTMDAIQYLNELE---IPVQINTTISKYNIHEVEEMAALVERL- 174
Query: 263 ELRIKPYYLHHPDLAAG--TSHFRLTIEEGQKIVASLK 298
+ + +E + L
Sbjct: 175 --GGVLWSVFFLVPTGRGSVEDMISPVEHEL-VFRKLY 209
>gi|222445792|ref|ZP_03608307.1| hypothetical protein METSMIALI_01435 [Methanobrevibacter smithii
DSM 2375]
gi|222435357|gb|EEE42522.1| hypothetical protein METSMIALI_01435 [Methanobrevibacter smithii
DSM 2375]
Length = 234
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGG 152
+ L+ + CP+ CR+C E++ K+ + A +I V+ +GG
Sbjct: 16 NMSLVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEIDDAADFIDA------VVISGG 69
Query: 153 DPLILSHKRLQ 163
+PL+ S ++
Sbjct: 70 EPLVQSDAVIE 80
>gi|221140004|ref|ZP_03564497.1| hypothetical protein SauraJ_00040 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|302751406|gb|ADL65583.1| radical SAM domain protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
Length = 448
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|15924566|ref|NP_372100.1| hypothetical protein SAV1576 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927156|ref|NP_374689.1| hypothetical protein SA1405 [Staphylococcus aureus subsp. aureus
N315]
gi|156979894|ref|YP_001442153.1| hypothetical protein SAHV_1563 [Staphylococcus aureus subsp. aureus
Mu3]
gi|255006362|ref|ZP_05144963.2| hypothetical protein SauraM_07835 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|13701374|dbj|BAB42668.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247347|dbj|BAB57738.1| putative 2-methylthioadenine synthetase [Staphylococcus aureus
subsp. aureus Mu50]
gi|156722029|dbj|BAF78446.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
Length = 448
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|118579699|ref|YP_900949.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118502409|gb|ABK98891.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
Length = 344
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C + C +C+ G ++G +S + AL + V +GG+P L+ +
Sbjct: 11 LTTRCNLSCAYCY---HAGLERGMDMSPEVARTALDLVALGEGPLHVQLSGGEP-TLARE 66
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
++ V+ +R ++ R + + ++ +L++ L E G V +
Sbjct: 67 MVRYVVAEIR-----RLKRPCTVGIQTNATLLDEDLVRFLGEHGVQVGV 110
>gi|21283257|ref|NP_646345.1| hypothetical protein MW1528 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486411|ref|YP_043632.1| hypothetical protein SAS1514 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651969|ref|YP_186473.1| hypothetical protein SACOL1633 [Staphylococcus aureus subsp. aureus
COL]
gi|87160469|ref|YP_494231.1| hypothetical protein SAUSA300_1536 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195385|ref|YP_500189.1| hypothetical protein SAOUHSC_01679 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268060|ref|YP_001247003.1| RNA modification protein [Staphylococcus aureus subsp. aureus JH9]
gi|150394128|ref|YP_001316803.1| RNA modification protein [Staphylococcus aureus subsp. aureus JH1]
gi|151221691|ref|YP_001332513.1| hypothetical protein NWMN_1479 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161509804|ref|YP_001575463.1| hypothetical protein USA300HOU_1577 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253316051|ref|ZP_04839264.1| hypothetical protein SauraC_07882 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253732229|ref|ZP_04866394.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733173|ref|ZP_04867338.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257793652|ref|ZP_05642631.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9781]
gi|258411048|ref|ZP_05681328.1| RNA modification protein [Staphylococcus aureus A9763]
gi|258420148|ref|ZP_05683103.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9719]
gi|258437408|ref|ZP_05689392.1| RNA modification protein [Staphylococcus aureus A9299]
gi|258443614|ref|ZP_05691953.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258446821|ref|ZP_05694975.1| RNA modification protein [Staphylococcus aureus A6300]
gi|258448735|ref|ZP_05696847.1| RNA modification protein [Staphylococcus aureus A6224]
gi|258450595|ref|ZP_05698657.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5948]
gi|258453552|ref|ZP_05701530.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5937]
gi|262049149|ref|ZP_06022026.1| hypothetical protein SAD30_0306 [Staphylococcus aureus D30]
gi|262051236|ref|ZP_06023460.1| hypothetical protein SA930_1667 [Staphylococcus aureus 930918-3]
gi|269203204|ref|YP_003282473.1| hypothetical protein SAAV_1568 [Staphylococcus aureus subsp. aureus
ED98]
gi|282893077|ref|ZP_06301311.1| MiaB tRNA modifying enzyme [Staphylococcus aureus A8117]
gi|282920125|ref|ZP_06327850.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9765]
gi|282928209|ref|ZP_06335814.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A10102]
gi|284024635|ref|ZP_06379033.1| hypothetical protein Saura13_08590 [Staphylococcus aureus subsp.
aureus 132]
gi|294848607|ref|ZP_06789353.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9754]
gi|295406699|ref|ZP_06816504.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8819]
gi|296275802|ref|ZP_06858309.1| hypothetical protein SauraMR_05622 [Staphylococcus aureus subsp.
aureus MR1]
gi|297207705|ref|ZP_06924140.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245719|ref|ZP_06929584.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8796]
gi|300911786|ref|ZP_07129229.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus TCH70]
gi|304380835|ref|ZP_07363495.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|21204697|dbj|BAB95393.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244854|emb|CAG43315.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57286155|gb|AAW38249.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
COL]
gi|87126443|gb|ABD20957.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202943|gb|ABD30753.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741129|gb|ABQ49427.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
aureus JH9]
gi|149946580|gb|ABR52516.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
aureus JH1]
gi|150374491|dbj|BAF67751.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160368613|gb|ABX29584.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253724018|gb|EES92747.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728713|gb|EES97442.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257787624|gb|EEV25964.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9781]
gi|257840198|gb|EEV64662.1| RNA modification protein [Staphylococcus aureus A9763]
gi|257843859|gb|EEV68253.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9719]
gi|257848613|gb|EEV72601.1| RNA modification protein [Staphylococcus aureus A9299]
gi|257851020|gb|EEV74963.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257854396|gb|EEV77345.1| RNA modification protein [Staphylococcus aureus A6300]
gi|257858013|gb|EEV80902.1| RNA modification protein [Staphylococcus aureus A6224]
gi|257861753|gb|EEV84552.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5948]
gi|257864283|gb|EEV87033.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5937]
gi|259160873|gb|EEW45893.1| hypothetical protein SA930_1667 [Staphylococcus aureus 930918-3]
gi|259162818|gb|EEW47383.1| hypothetical protein SAD30_0306 [Staphylococcus aureus D30]
gi|262075494|gb|ACY11467.1| hypothetical protein SAAV_1568 [Staphylococcus aureus subsp. aureus
ED98]
gi|269941066|emb|CBI49450.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282590016|gb|EFB95098.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A10102]
gi|282594473|gb|EFB99458.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9765]
gi|282764395|gb|EFC04521.1| MiaB tRNA modifying enzyme [Staphylococcus aureus A8117]
gi|283470855|emb|CAQ50066.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ST398]
gi|285817258|gb|ADC37745.1| MiaB family protein, possibly involved in tRNA or rRNA modification
[Staphylococcus aureus 04-02981]
gi|294824633|gb|EFG41056.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9754]
gi|294968446|gb|EFG44470.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8819]
gi|296887722|gb|EFH26620.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177370|gb|EFH36622.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8796]
gi|298694858|gb|ADI98080.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
gi|300886032|gb|EFK81234.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus TCH70]
gi|304340562|gb|EFM06496.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312829964|emb|CBX34806.1| RNA modification enzyme, MiaB family protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315129855|gb|EFT85845.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
aureus CGS03]
gi|315198728|gb|EFU29056.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140539|gb|EFW32393.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144076|gb|EFW35845.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus MRSA177]
gi|323440474|gb|EGA98186.1| hypothetical protein SAO11_0770 [Staphylococcus aureus O11]
gi|323443248|gb|EGB00866.1| hypothetical protein SAO46_0897 [Staphylococcus aureus O46]
gi|329727386|gb|EGG63842.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
aureus 21172]
gi|329728416|gb|EGG64853.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
aureus 21189]
gi|329733119|gb|EGG69456.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
aureus 21193]
Length = 448
Score = 39.9 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|312622481|ref|YP_004024094.1| RNA modification enzyme, miab family [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202948|gb|ADQ46275.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
kronotskyensis 2002]
Length = 434
Score = 39.9 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 27/229 (11%), Positives = 77/229 (33%), Gaps = 23/229 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFT- 150
R +K+ C +C +C G+ + L ++ + ++ I + +
Sbjct: 141 RSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSLKSIEEEVIRLVQKGYKEFVITGINISS 200
Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
G D + L V++ + I+ V+ +R S P++ L+ + +++
Sbjct: 201 YGKD--LDGKVTLIDVIERVNKIEGVKRIRLSSLEPVIMNGEFIERLLS-FDKLCHHLHL 257
Query: 210 AIHANHPYEF--------SEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRT 260
++ + + + + + R+ + + ++ G + E +
Sbjct: 258 SLQSGSDKILKLMNRHYTTAQYQSIVDRIREKWDDVAFTTDIIVGFPGETEEDFNATLDF 317
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLT-------IEEGQKIVASLKEKIS 302
++ ++ GT + + E KI+ + +S
Sbjct: 318 VQKIGFSRIHVFRFSPKKGTKAYEMPNQVDSKEKERRSKIMKEVAASLS 366
>gi|294794006|ref|ZP_06759143.1| putative ThiH protein [Veillonella sp. 3_1_44]
gi|294455576|gb|EFG23948.1| putative ThiH protein [Veillonella sp. 3_1_44]
Length = 482
Score = 39.9 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + ++ VI
Sbjct: 90 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 149
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+G DPL L+ +L++++ I ++
Sbjct: 150 ESGEDPLNNP---LEYILESIKTIYSIKNK 176
>gi|317152988|ref|YP_004121036.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943239|gb|ADU62290.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 315
Score = 39.9 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 29/149 (19%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C+ ++ + ++ LA + E ++ ++ GG+PL
Sbjct: 18 ITTSCSLSCRYCYASHW---KEERHIDTERFLELLAEMDEM-GVFLLLLAGGEPLRHPD- 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--PELIQCLKEAGK---PVYIAIHANH 215
+ L +R+ + PEL L E K P + + +H
Sbjct: 73 ----FFRILEA-------AIQTRMSVSVLTNGTESPELAVRLAECHKNIHPFVVQVSLDH 121
Query: 216 PYEF--------SEEAIAAISRLANAGII 236
P E + I LA G+
Sbjct: 122 PSEAVNDRTRGKTASVRQFIHTLAENGLT 150
>gi|182417560|ref|ZP_02626322.2| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237667762|ref|ZP_04527746.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182378573|gb|EDT76101.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237656110|gb|EEP53666.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 464
Score = 39.9 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 13/128 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+++ C +C +C ++ G + + ++ + I E+I D
Sbjct: 164 KGSAYIRIAEGCNNFCTYCIIPKIRGKFRSRKM--ENILKEAEELAS-QGIKELILIAQD 220
Query: 154 P-LILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207
+ S K L ++L L I+ ++ +R P+ I ELI + + K V
Sbjct: 221 TTMYGSDIYGKKNLHELLNELSKIEGIEWIRV----LYCYPEEIYDELIDEMAQNNKVVK 276
Query: 208 YIAIHANH 215
Y+ + H
Sbjct: 277 YLDLPIQH 284
>gi|86743153|ref|YP_483553.1| nitrogenase cofactor biosynthesis protein NifB [Frankia sp. CcI3]
gi|86570015|gb|ABD13824.1| nitrogenase cofactor biosynthesis protein NifB [Frankia sp. CcI3]
Length = 527
Score = 39.9 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 29/226 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIW 145
H+Y R+ + + C + C +C R+ ++ T+LS +D A + + + +
Sbjct: 66 HQYYARMHVAVAPGCNIQCNYCNRKFDCANESRPGVTSTLLSPEDALAKVKLVASEIKQM 125
Query: 146 EV--IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI------------VDPQR 191
V I GDPL + + R +++ + VD
Sbjct: 126 SVLGIAGPGDPLANPKPTFRTMELVARDCPDIKLC-LSTNGLTLPDHVDRIAELNVDHVT 184
Query: 192 INPELIQCLKEAGKPVYIA------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
I +I +IA SE + ++ L I+ SV++
Sbjct: 185 ITINMIDPEVGERIYPWIAFRGKRYTGREASRILSERQLEGLAMLTERKILCKVNSVMIP 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAA-GTSHFRLTIEEG 290
GINDD + R EL + + A +HF LT + G
Sbjct: 245 GINDDHLVEV--SRKVKELGAFLHNVMPLVSAPEHGTHFGLTGQRG 288
>gi|254518626|ref|ZP_05130682.1| molybdenum cofactor biosynthesis protein A [Clostridium sp.
7_2_43FAA]
gi|226912375|gb|EEH97576.1| molybdenum cofactor biosynthesis protein A [Clostridium sp.
7_2_43FAA]
Length = 323
Score = 39.5 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 81/203 (39%), Gaps = 34/203 (16%)
Query: 92 RYPDRILLK---LLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+Y I L C + C +C + +K L++ + + K I +V
Sbjct: 4 KYGREIDYLRISLTDNCNLRCIYCMEEKNNTFLKKEDKLTNDEIYKIVCE-SAKLGIKKV 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
FTGG+PL+ + ++++ + I+ ++ + + ++ E ++ L +AG
Sbjct: 63 RFTGGEPLVRKD--IVELMQRINTIQGIEEIYLTTNGILL------EENVEILAKAGLK- 113
Query: 208 YIAIHANHPYEFS----------EEAIAAISRLANAGIILLSQSVLLKGINDDPEI-LAN 256
+ I + + + + +AAI + + GI + +V+++ INDD I N
Sbjct: 114 GVNISLDSLKKETFKRLTRLGDLNKVLAAIDKCISLGIKVKLNTVMIEDINDDEIIDFVN 173
Query: 257 L---------MRTFVELRIKPYY 270
L + + + Y
Sbjct: 174 LTLQKPIDVRFIELMPIGVGSKY 196
>gi|224476684|ref|YP_002634290.1| putative radical SAM family protein [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421291|emb|CAL28105.1| putative radical SAM family protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 448
Score = 39.5 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 21/123 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C +C FC + ++ S+D E + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFC-----IIPWARGLMRSRDPEKVVEQATTLVNSGYKEIVLTG 196
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L L ++L+ L I ++ +R S ++ ++ E+I + +
Sbjct: 197 IHTGGYGQD---LKDYNLAQLLRDLETIDGLERIRISS----IEASQLTDEVINVISNSN 249
Query: 205 KPV 207
K V
Sbjct: 250 KVV 252
>gi|313498597|gb|ADR59963.1| Radical SAM domain-containing protein [Pseudomonas putida BIRD-1]
Length = 476
Score = 39.5 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 80/227 (35%), Gaps = 34/227 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTG 151
+ ++L + C + C +C++ ++ G +S+ EA++ + Q + V+F G
Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTATAEASVEMLLKESPNEQRYSVVFFG 161
Query: 152 GDPLI---LSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G+PL L + + K V+ + + + E+I L +
Sbjct: 162 GEPLSNRPLIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEEIIDWLNAHRFGL 215
Query: 208 YIAIHANHPYEF------------SEEAIAAISRL---ANAGIILLSQSVLLKGINDDPE 252
I + P + + + L + ++ L +GI D
Sbjct: 216 SI--SIDGPKTVHDRNRITVGGQGTYAVVRRKADLLLSRYTSRPVGARVTLTRGITDVET 273
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
I +L + + D + F LT +E ++ A++K
Sbjct: 274 IWNHLFNEMGFAEVGFAPVTSGD----MADFNLTGDELVQVFANMKA 316
>gi|303231350|ref|ZP_07318084.1| molybdenum cofactor biosynthesis protein A [Veillonella atypica
ACS-049-V-Sch6]
gi|302513946|gb|EFL55954.1| molybdenum cofactor biosynthesis protein A [Veillonella atypica
ACS-049-V-Sch6]
Length = 321
Score = 39.5 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 56/161 (34%), Gaps = 20/161 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C E+ + +LS + L + + V TGG+PL+
Sbjct: 16 LTDACNFCCPYCRPAEITPQSQHQLLSVDEWMTILGAFHQ-VGVKAVRLTGGEPLLYP-- 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPELIQCLKEAGKPVYIA 210
++++L ++ + + + ++ P R+N L L + +
Sbjct: 73 HIEELLARIKQTGWFEDISMTTNGSLLAPRAAKLKELGLNRVNISL-DSLDSDAFALCVG 131
Query: 211 IHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDD 250
+ + I +AG + +VL + DD
Sbjct: 132 K----ANQLDS-VLNGIQSAIDAGFTSVKINTVLSRHWTDD 167
>gi|282916846|ref|ZP_06324604.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus D139]
gi|283770652|ref|ZP_06343544.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
gi|282319333|gb|EFB49685.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus D139]
gi|283460799|gb|EFC07889.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
Length = 448
Score = 39.5 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|304321115|ref|YP_003854758.1| radical SAM domain protein [Parvularcula bermudensis HTCC2503]
gi|303300017|gb|ADM09616.1| radical SAM domain protein [Parvularcula bermudensis HTCC2503]
Length = 311
Score = 39.5 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 9/131 (6%)
Query: 98 LLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L C + C C+ + LS + L +E E+ TGG+P +
Sbjct: 34 LWLNTGTLCNIACENCYILSSPQNDDLVYLSRDEARPYLDEAREMGA-REIGITGGEPFM 92
Query: 157 LSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ L +L + + + RI L+ + + + + +
Sbjct: 93 NPDIMGILEDALDR-----GFDVLVLTNAMKPMMRPRITEGLMALSDDHKARLTLRVSMD 147
Query: 215 HPYEFSEEAIA 225
H +
Sbjct: 148 HHDRAHHDVER 158
>gi|254237264|ref|ZP_04930587.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa C3719]
gi|254243604|ref|ZP_04936926.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa 2192]
gi|42821599|dbj|BAD11787.1| nirJ [Burkholderia cepacia]
gi|126169195|gb|EAZ54706.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa C3719]
gi|126196982|gb|EAZ61045.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa 2192]
Length = 387
Score = 39.5 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 34/232 (14%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ ++ +P + R P ++ LL C + C+ C+ S L + + +
Sbjct: 11 LAEDAPTPRRAGGRRAP-VVIWNLLRRCNLTCKHCY-STSADSDFRGELETAEILRGIDD 68
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINP 194
++ + + +I +GG+PL+ L ++ R + S ++D QR+
Sbjct: 69 LRA-AGVRVLILSGGEPLMHPD--LFEIAAHARQAG--MFVALSSNGTLIDEGNIQRVAE 123
Query: 195 ELIQC-------LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
L+E + A+AA+ A I + ++ L +
Sbjct: 124 ARFDYVGISLDGLRETHDR------FRQKQGSFDAALAAMRLCREADIRVGMRTTLTEEN 177
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAG--------TSHFRLTIEEGQ 291
L +LMR ++ +YL H + + H R
Sbjct: 178 AAQLPALLDLMREL---DVQKFYLSHLNYSGRGRRSRALDAHHRRTREALAL 226
>gi|313892993|ref|ZP_07826570.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella sp.
oral taxon 158 str. F0412]
gi|313442346|gb|EFR60761.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella sp.
oral taxon 158 str. F0412]
Length = 482
Score = 39.5 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + + + ++ VI
Sbjct: 90 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 149
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+G DPL L+ +L++++ I ++
Sbjct: 150 ESGEDPLNNP---LEYILESIKTIYSIKNK 176
>gi|291525036|emb|CBK90623.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale DSM 17629]
Length = 434
Score = 39.5 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 46/115 (40%), Gaps = 18/115 (15%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149
+ R +K+ C +C +C + + S+ E +A ++ + EV+
Sbjct: 140 KEHTRAFIKVQDGCNQFCSYC-----IIPYARGRVRSRRFENVIAEVERLAANGFKEVVL 194
Query: 150 TGGDPLILS--------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
TG + LS L ++++ + +K ++ +R S P + + EL
Sbjct: 195 TG---IHLSSYGVDFEEATGLLELIQAVNAVKGIERIRLGSLEPKIVTEHFASEL 246
>gi|75910116|ref|YP_324412.1| nitrogenase cofactor biosynthesis protein NifB [Anabaena variabilis
ATCC 29413]
gi|20138957|sp|Q43883|NIFB_ANAAZ RecName: Full=FeMo cofactor biosynthesis protein nifB
gi|762776|gb|AAA87247.1| NifB protein [Anabaena azollae]
gi|75703841|gb|ABA23517.1| Nitrogenase cofactor biosynthesis protein NifB [Anabaena variabilis
ATCC 29413]
Length = 475
Score = 39.5 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 83/241 (34%), Gaps = 31/241 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + L + Q+
Sbjct: 52 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAHKVLVIAGKIPQM 111
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI----------VDPQRIN 193
+ G GDPL K + +++ + + ++ +
Sbjct: 112 TVLGIAGPGDPLANPEKTFRTFELIADKAPDIKLC-LSTNGLMLPEYVDRIKQLNIDHVT 170
Query: 194 PELIQCLKEAGKPVYIAIHANH--------PYEFSEEAIAAISRLANAGIILLSQSVLLK 245
L E G +Y +H E+ + + L A I+ SV++
Sbjct: 171 ITLNTIDPEIGAQIYSWVHYKRRRYRGAEGARILLEKQMEGLQALREADILCKVNSVMIP 230
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAA-GTSHFRLTIEEG--QKIVASLKEKIS 302
GIND + N M E + + A +HF LT + G QK + S++++ S
Sbjct: 231 GINDQHLVEVNKMIR--EQGAFLHNIMPLISAPEHGTHFGLTGQRGPSQKELKSVQDQCS 288
Query: 303 G 303
G
Sbjct: 289 G 289
>gi|17229009|ref|NP_485557.1| nitrogen fixation protein [Nostoc sp. PCC 7120]
gi|128227|sp|P20627|NIFB_ANASP RecName: Full=FeMo cofactor biosynthesis protein nifB
gi|97705|pir||A34443 nitrogen fixation protein nifB - Anabaena sp
gi|142035|gb|AAA22004.1| nitrogenase [Nostoc sp. PCC 7120]
gi|17135337|dbj|BAB77883.1| nitrogen fixation protein [Nostoc sp. PCC 7120]
Length = 475
Score = 39.5 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 83/241 (34%), Gaps = 31/241 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + L + Q+
Sbjct: 52 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAHKVLVIAGKIPQM 111
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI----------VDPQRIN 193
+ G GDPL K + +++ + + ++ +
Sbjct: 112 TVLGIAGPGDPLANPEKTFRTFELIADKAPDIKLC-LSTNGLMLPEYVDRIKQLNIDHVT 170
Query: 194 PELIQCLKEAGKPVYIAIHANH--------PYEFSEEAIAAISRLANAGIILLSQSVLLK 245
L E G +Y +H E+ + + L A I+ SV++
Sbjct: 171 ITLNTIDPEIGAQIYSWVHYKRRRYRGAEGARILLEKQMEGLQALREADILCKVNSVMIP 230
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAA-GTSHFRLTIEEG--QKIVASLKEKIS 302
GIND + N M E + + A +HF LT + G QK + S++++ S
Sbjct: 231 GINDQHLVEVNKMIR--EQGAFLHNIMPLISAPEHGTHFGLTGQRGPSQKELKSVQDQCS 288
Query: 303 G 303
G
Sbjct: 289 G 289
>gi|308371235|ref|ZP_07424286.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu003]
gi|308329484|gb|EFP18335.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu003]
Length = 334
Score = 39.5 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
++ C + CR+C E + +LS K+ A + + +V TGG+PLI
Sbjct: 8 VIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIRPD 66
Query: 160 KRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRIN 193
L ++++TL ++ L + ++ R++
Sbjct: 67 --LPEIVRTLSAKVGEDSGLRDLAITTNG-VLLADRVD 101
>gi|291542169|emb|CBL15279.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus
bromii L2-63]
Length = 446
Score = 39.5 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 20/144 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
P LK+ C C +C S+D E + + + + E+
Sbjct: 144 PYTAYLKIAEGCDNRCSYCA-----IPMIRGRFRSRDIEDVVKEAEGLAERGVKELNVIA 198
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + L ++L+ L I + +R P RI ELI + K
Sbjct: 199 QDTTRFGEDKYGKPMLAELLRRLCRIDGFKWIRV----LYCYPDRITDELIDTIAGEDKI 254
Query: 207 V-YIAIHANHPYEFSEEAIAAISR 229
V Y+ I H + + ++R
Sbjct: 255 VKYMDIPLQH---CDGDVLRRMNR 275
>gi|281492812|ref|YP_003354792.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
subsp. lactis KF147]
gi|281376464|gb|ADA65950.1| Fe-S oxidoreductase, radical SAM superfamily [Lactococcus lactis
subsp. lactis KF147]
Length = 275
Score = 39.5 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 73/257 (28%), Gaps = 77/257 (29%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM +S +D E Y+++ V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKE-ISKEDLEKIAYYLEKYKVPL-VAICGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P++ +L ++ L H
Sbjct: 68 PILHP--KLIDFVQLLSE----------------------------------------HK 85
Query: 214 NHPYEFSEEAIAAIS---RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
N+P + + +L +AGI ++++ I
Sbjct: 86 NYPTIATNAVDVSYKYLYQLKSAGI------------------------RYLQIGIDSLR 121
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
D H R +E+ K + L + G G K+ K+
Sbjct: 122 YSKLDNYKENGHLR-KVEKTVKYLKEL-GILYGFATCV-TRKNIGELSKI---ASYAKET 175
Query: 331 GNGSYCITDHHNIVHDY 347
G ++ + Y
Sbjct: 176 GAELLKLSTYDGENQVY 192
>gi|257068045|ref|YP_003154300.1| GTP cyclohydrolase subunit MoaA [Brachybacterium faecium DSM 4810]
gi|256558863|gb|ACU84710.1| GTP cyclohydrolase subunit MoaA [Brachybacterium faecium DSM 4810]
Length = 366
Score = 39.5 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 71/205 (34%), Gaps = 27/205 (13%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFR-RE 116
+P + E D + +P + R+ L L C + C +C
Sbjct: 10 MPTPRRTDETATELPDTS-ERPDTPA--LADRFGREATDLRLSLTDFCNLRCTYCMPASG 66
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+ K +LS + + E+ I +V FTGG+PL L++++ + +
Sbjct: 67 LTFLGKKQLLSVDEVVRLVRIGVERLGIEQVRFTGGEPLTRPD--LEEIIAGVASLDPRP 124
Query: 177 ILRFHSRVPIVDP----------QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ + +D RIN L + E + + +A
Sbjct: 125 DISLTTNAIGLDHRAARLRAAGLDRINVSLDSVVSETFERL-------SRRPLLHRVLAG 177
Query: 227 ISRLANAGI-ILLSQSVLLKGINDD 250
I AG+ + +VLL G+ND
Sbjct: 178 IDGARAAGLDPIKVNAVLLPGVNDQ 202
>gi|160945445|ref|ZP_02092671.1| hypothetical protein FAEPRAM212_02968 [Faecalibacterium prausnitzii
M21/2]
gi|158443176|gb|EDP20181.1| hypothetical protein FAEPRAM212_02968 [Faecalibacterium prausnitzii
M21/2]
Length = 487
Score = 39.5 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + ++S + + A+ ++ E S EV F GG+PL
Sbjct: 107 LHVAHSCNLSCSYCFASQGRYHGDRALMSFEVGKRAMDFLIENSGTRRNLEVDFFGGEPL 166
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ K+L + I H + RF + I+ ++I + V +
Sbjct: 167 MNFDMVKKLVAYCREQEKI-HNKNFRFT---MTTNGVLIDDDVIDFCNKECHNVVL 218
>gi|150002946|ref|YP_001297690.1| thiamine biosynthesis protein ThiH [Bacteroides vulgatus ATCC 8482]
gi|254884684|ref|ZP_05257394.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 4_3_47FAA]
gi|294776606|ref|ZP_06742075.1| thiazole biosynthesis protein ThiH [Bacteroides vulgatus PC510]
gi|319642353|ref|ZP_07997008.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_40A]
gi|149931370|gb|ABR38068.1| thiamine biosynthesis protein ThiH [Bacteroides vulgatus ATCC 8482]
gi|254837477|gb|EET17786.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 4_3_47FAA]
gi|294449521|gb|EFG18052.1| thiazole biosynthesis protein ThiH [Bacteroides vulgatus PC510]
gi|317386013|gb|EFV66937.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_40A]
Length = 472
Score = 39.5 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L E + + + + I H+ Y +RI++ + C C +C
Sbjct: 49 SHREAALLLECDQPDLTERIFRLAQEIKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ L+ ++ + +Q+ + G DPL + + + ++T+ IKH
Sbjct: 109 NKTIARKKLTQEEIRKEVIALQDMGHKRLALEAGEDPLRNPIEYILESIQTIYSIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 169 AIRRVNVNIAATTVENYR 186
>gi|15674140|ref|NP_268315.1| hypothetical protein L16911 [Lactococcus lactis subsp. lactis
Il1403]
gi|12725218|gb|AAK06256.1|AE006444_7 unknown protein [Lactococcus lactis subsp. lactis Il1403]
Length = 275
Score = 39.5 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 73/257 (28%), Gaps = 77/257 (29%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM +S +D E Y+++ V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKE-ISKEDLEKIAYYLEKYKVPL-VAICGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P++ +L ++ L H
Sbjct: 68 PILHP--KLIDFVQLLSE----------------------------------------HK 85
Query: 214 NHPYEFSEEAIAAIS---RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
N+P + + +L +AGI ++++ I
Sbjct: 86 NYPTIATNAVDVSYEYLYQLKSAGI------------------------RYLQIGIDSLQ 121
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
D H R +E+ K + L + G G K+ K+
Sbjct: 122 YSKLDNYKENGHLR-KVEKTVKYLKEL-GILYGFATCV-TRKNIGELSKI---ASYAKET 175
Query: 331 GNGSYCITDHHNIVHDY 347
G ++ + Y
Sbjct: 176 GAELLKLSTYDGENQVY 192
>gi|315658148|ref|ZP_07911020.1| Fe-S oxidoreductase [Staphylococcus lugdunensis M23590]
gi|315496477|gb|EFU84800.1| Fe-S oxidoreductase [Staphylococcus lugdunensis M23590]
Length = 451
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + + E++ TG
Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-KKVVEQATTLV--NAGYKEIVLTGIH 201
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I ++ +R S ++ ++ E+I ++++ K
Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLETIDSLERIRISS----IEASQLTDEVIDVIEKSNK- 253
Query: 207 VYIAIHA 213
V +H
Sbjct: 254 VVRHLHI 260
>gi|294650282|ref|ZP_06727650.1| molybdopterin biosynthesis protein A [Acinetobacter haemolyticus
ATCC 19194]
gi|292823812|gb|EFF82647.1| molybdopterin biosynthesis protein A [Acinetobacter haemolyticus
ATCC 19194]
Length = 343
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 16/182 (8%)
Query: 79 GDNNHSPLKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
+ + L + +Y ++ + + C C +C +K +LS +
Sbjct: 4 HEIPETNLPILQDQYGRIKRKLRISVTDRCNFKCVYCMPEHPEWMKKQDLLSFESLLVFC 63
Query: 136 AYIQEKSQIWEVIFTGGDPLIL-SHKRLQKVLKTLRYIKHVQILRFHSRVPIV------D 188
Y+ + I + TGG+PL+ + L+ L+ I ++ + + +
Sbjct: 64 TYMVK-QGIENIRITGGEPLMRQGVVHFIRDLQKLKKIG-LKRISMTTNGHYLAKYADQL 121
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
+L L + A+ E + + I A I VL+K N
Sbjct: 122 KAAGLDDLNISLDSIDAKQFKALT---KKELNP-VLEGIKAAQKAEIPFKINCVLMKDHN 177
Query: 249 DD 250
DD
Sbjct: 178 DD 179
>gi|290968070|ref|ZP_06559619.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
gi|290781976|gb|EFD94555.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
Length = 295
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 8/116 (6%)
Query: 98 LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAY-IQEKSQIWEVIFTGGDPL 155
+L++ C C FC M + S + + + + + + GD L
Sbjct: 21 ILRVTIGCSHNRCTFCS---MYKDSSYRIRSLAEIDGIIERGARAMPYVRRIFLADGDAL 77
Query: 156 ILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+L L +LK + R + D R PE +Q LK+AG +
Sbjct: 78 VLPTASLLHILKKCYDTFPQIT--RIGAYATPNDINRKTPEELQALKDAGLDILYM 131
>gi|289596878|ref|YP_003483574.1| molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei
T469]
gi|289534665|gb|ADD09012.1| molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei
T469]
Length = 308
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C R + ++ + E L I + I +V FTGG+PL +
Sbjct: 16 VTERCNLNCFYCHREGEWHR-HHSEMTPDEIERILK-IARELDIRKVKFTGGEPLCRND 72
>gi|261349664|ref|ZP_05975081.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Methanobrevibacter smithii DSM 2374]
gi|288861622|gb|EFC93920.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Methanobrevibacter smithii DSM 2374]
Length = 234
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGG 152
+ L+ + CP+ CR+C E++ K+ + A +I V+ +GG
Sbjct: 16 NMSLVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEIDDAADFIDA------VVISGG 69
Query: 153 DPLILSHKRLQ 163
+PL+ S ++
Sbjct: 70 EPLVQSDAVIE 80
>gi|60682945|ref|YP_213089.1| putative anaerobic ribonucleoside-triphosphate reductase activating
protein [Bacteroides fragilis NCTC 9343]
gi|253566076|ref|ZP_04843530.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 3_2_5]
gi|265766825|ref|ZP_06094654.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 2_1_16]
gi|60494379|emb|CAH09175.1| putative anaerobic ribonucleoside-triphosphate reductase activating
protein [Bacteroides fragilis NCTC 9343]
gi|251945180|gb|EES85618.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 3_2_5]
gi|263253202|gb|EEZ24678.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 2_1_16]
gi|301164411|emb|CBW23969.1| putative anaerobic ribonucleoside-triphosphate reductase activating
protein [Bacteroides fragilis 638R]
Length = 152
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
I++ YP+ I+ L C C C E Q G LS + + I
Sbjct: 2 NILYTYPETIVDGEGIRYSIYLAGCRHGCPGCHNPESWNPQAGEELSEGRLASIIREINS 61
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP L
Sbjct: 62 NPLLDGVTFSGGDPFYDPEAFL 83
>gi|313888304|ref|ZP_07821975.1| ribosomal protein S12 methylthiotransferase RimO [Peptoniphilus
harei ACS-146-V-Sch2b]
gi|312845707|gb|EFR33097.1| ribosomal protein S12 methylthiotransferase RimO [Peptoniphilus
harei ACS-146-V-Sch2b]
Length = 438
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 20/144 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF---- 149
+K+ C C +C + G + + +D + + Y+ E+I
Sbjct: 142 NTTEYVKISEGCNNNCSYCIIPSLRGKNRSRKI--EDIYSEVEYLVS-KGAREIILIAQN 198
Query: 150 ---TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G D + S L ++ + I+ ++ +R + P ELI+ K K
Sbjct: 199 TTDYGID--LYSKYSLANLINKISKIEDLKWIRV----LYLYPDHFTDELIEEFKNNDKL 252
Query: 207 V-YIAIHANHPYEFSEEAIAAISR 229
V Y+ + H S++ + ++R
Sbjct: 253 VNYVDMPLQH---ISDDVLKRMNR 273
>gi|312876981|ref|ZP_07736955.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796212|gb|EFR12567.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
lactoaceticus 6A]
Length = 477
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 78/232 (33%), Gaps = 31/232 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C CR+C K L+ + + I+ + G DP
Sbjct: 87 LYISNFCVNNCRYCGYHRSNTKMKRRKLTMDEIRKEVEIIESLGHKRIALELGEDP---K 143
Query: 159 HKRLQKVLKTLRYI-------KHVQILRFHSRVPIVDPQRINPE-----LIQCLKEAGKP 206
++ V+ +++ I +++ + + ++ R+ E + + +P
Sbjct: 144 EAPIEYVIDSIKTIYSVYKEKGNIRRVNVNIAATTIEEYRMLKEAKIGTYVLFQETYHRP 203
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLMRTFVE 263
Y +H P + A+ R AGI L L + ++ +
Sbjct: 204 TYEYMHPEGPKSDYDWHTMAMDRAMQAGIDDVGLGVLFGLYDYKFEVVGLILHAKHLEER 263
Query: 264 LRIKPYYLHHPD--------LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ + P + + ++ EE +KIVA ++ L P
Sbjct: 264 FGVGPHTISVPRIRPAEGVEVTKERYPYLVSDEEFKKIVAIIR-----LAVP 310
>gi|312792409|ref|YP_004025332.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179549|gb|ADQ39719.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 477
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 78/232 (33%), Gaps = 31/232 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C CR+C K L+ + + I+ + G DP
Sbjct: 87 LYISNFCVNNCRYCGYHRSNTKMKRRKLTMDEIRKEVEIIESLGHKRIALELGEDP---K 143
Query: 159 HKRLQKVLKTLRYI-------KHVQILRFHSRVPIVDPQRINPE-----LIQCLKEAGKP 206
++ V+ +++ I +++ + + ++ R+ E + + +P
Sbjct: 144 EAPIEYVIDSIKTIYSVYKEKGNIRRVNVNIAATTIEEYRMLKEAKIGTYVLFQETYHRP 203
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLMRTFVE 263
Y +H P + A+ R AGI L L + ++ +
Sbjct: 204 TYEYMHPEGPKSDYDWHTMAMDRAMQAGIDDVGLGVLFGLYDYKFEVVGLILHAKHLEER 263
Query: 264 LRIKPYYLHHPD--------LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ + P + + ++ EE +KIVA ++ L P
Sbjct: 264 FGVGPHTISVPRIRPAEGVEVTKERYPYLVSDEEFKKIVAIIR-----LAVP 310
>gi|298682218|gb|ADI95284.1| PeaB [Pseudomonas putida]
Length = 476
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 81/227 (35%), Gaps = 34/227 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTG 151
+ ++L + C + C +C++ ++ G +S+ EA++ + Q + V+F G
Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTATAEASVEMLLKESPNEQRYSVVFFG 161
Query: 152 GDPLI---LSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G+PL L + + K V+ + + + E+I L +
Sbjct: 162 GEPLSNRPLIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEEIIDWLNAHRFGL 215
Query: 208 YIAIHANHPYEF------------SEEAIAAISRL---ANAGIILLSQSVLLKGINDDPE 252
I + P + + + + L + ++ L +GI D
Sbjct: 216 SI--SIDGPKTVHDRNRITVGGQGTYDVVRRKADLLLSRYTSRPVGARVTLTRGITDVET 273
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
I +L + + D + F LT +E ++ A++K
Sbjct: 274 IWNHLFNEMGFAEVGFAPVTSGD----MADFNLTGDELVQVFANMKA 316
>gi|294792210|ref|ZP_06757358.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 6_1_27]
gi|294457440|gb|EFG25802.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 6_1_27]
Length = 321
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C E+ + +LS + L + V TGG+PL+
Sbjct: 16 LTDACNFCCPYCRPAEITPQSQTQLLSVDEWMTILGAFH-HIGVKAVRLTGGEPLLYP-- 72
Query: 161 RLQKVLKTLRY 171
++++L ++
Sbjct: 73 HIEELLGRIKE 83
>gi|282850584|ref|ZP_06259963.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula
ATCC 17745]
gi|282580077|gb|EFB85481.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula
ATCC 17745]
Length = 321
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C E+ + +LS + L + V TGG+PL+
Sbjct: 16 LTDACNFCCPYCRPAEITPQSQTQLLSVDEWMTILGAFH-HIGVKAVRLTGGEPLLYP-- 72
Query: 161 RLQKVLKTLRY 171
++++L ++
Sbjct: 73 HIEELLGRIKE 83
>gi|167969718|ref|ZP_02551995.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis H37Ra]
gi|215405104|ref|ZP_03417285.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis 02_1987]
gi|215432065|ref|ZP_03429984.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis EAS054]
gi|218754879|ref|ZP_03533675.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis GM 1503]
gi|219559151|ref|ZP_03538227.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis T17]
gi|254552189|ref|ZP_05142636.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|308374774|ref|ZP_07437356.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu006]
gi|308340798|gb|EFP29649.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu006]
Length = 335
Score = 39.5 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
++ C + CR+C E + +LS K+ A + + +V TGG+PLI
Sbjct: 9 VIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIRPD 67
Query: 160 KRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRIN 193
L ++++TL ++ L + ++ R++
Sbjct: 68 --LPEIVRTLSAKVGEDSGLRDLAITTNG-VLLADRVD 102
>gi|157415263|ref|YP_001482519.1| MiaB-like tRNA modifying protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|157386227|gb|ABV52542.1| hypothetical protein C8J_0943 [Campylobacter jejuni subsp. jejuni
81116]
gi|307747905|gb|ADN91175.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
M1]
gi|315932134|gb|EFV11077.1| RNA modification enzyme, MiaB family protein [Campylobacter jejuni
subsp. jejuni 327]
Length = 416
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ +K+ C C +C + G + K + + E++ TG +
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKS--RSVDEKALLKQVEILGANGY-SEIVLTGTN 188
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K L K+L+ + I ++ +R S ++P +I+ ++ L E ++
Sbjct: 189 IGSYGLKNGTSLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLERHLH 244
Query: 211 IHANHPYE 218
I H E
Sbjct: 245 IALQHTSE 252
>gi|149909620|ref|ZP_01898273.1| molybdenum cofactor biosynthesis protein A [Moritella sp. PE36]
gi|149807324|gb|EDM67277.1| molybdenum cofactor biosynthesis protein A [Moritella sp. PE36]
Length = 325
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C K L + + E +V TGG+P +
Sbjct: 18 ITDVCNFKCNYCLPDGYKAEGKPEFLERNELRRIVTGFAEM-GTEKVRITGGEPSLRKD- 75
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVP 185
++ + I + + +
Sbjct: 76 -FTDIISDIAAIPKINKVATTTNGF 99
>gi|110288495|sp|P27714|NIFB_HERSE RecName: Full=FeMo cofactor biosynthesis protein nifB
gi|84514316|gb|AAA25028.3| NifB [Herbaspirillum seropedicae]
Length = 525
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 69/237 (29%), Gaps = 28/237 (11%)
Query: 69 ILPEEREDPIGDN-NHSPLKGIV-HRYPDRILLKLLHVCPVYCRFCFRRE------MVGS 120
P + + + + P H + R+ + + C + C +C R+ G
Sbjct: 43 DGPADMAPEVWEKVKNHPCYSEEAHHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGV 102
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL---------------ILSHKRLQK 164
+ + + A Q+ + G GDPL +L
Sbjct: 103 VSEKLTPEQAAKKVFAVASTIPQMTVLGIAGPGDPLANPAKTFKTFELISQTAPDIKLCL 162
Query: 165 VLKTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQCLKEA-GKPVYIAIHANHPYEFSEE 222
L H+ + F+ + ++PE+ Q + + E
Sbjct: 163 STNGLALPDHIDTIAAFNVDHVTITTNMVDPEIGQHIYPWIYYQNKRWTGIDAARILHER 222
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ + L GI+ SV++ GIND + R + + A
Sbjct: 223 QMLGLEMLTARGILCKVNSVMIPGINDQHLVEV--NRAVKSRGAFLHNIMPLISAPE 277
>gi|86150946|ref|ZP_01069162.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124495|ref|YP_004066499.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85842116|gb|EAQ59362.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
260.94]
gi|315018217|gb|ADT66310.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 416
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ +K+ C C +C + G + K + + E++ TG +
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKS--RSVDEKALLKQVEILGANGY-SEIVLTGTN 188
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K L K+L+ + I ++ +R S ++P +I+ ++ L E ++
Sbjct: 189 IGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLERHLH 244
Query: 211 IHANHPYE 218
I H E
Sbjct: 245 IALQHTSE 252
>gi|222622553|gb|EEE56685.1| hypothetical protein OsJ_06140 [Oryza sativa Japonica Group]
Length = 391
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + + L C + C++C + V + +LS + +A + S + ++ T
Sbjct: 73 RFHNYLRISLTERCNLRCQYCMPAQGVQLTPNSELLSHDEIIR-VAGLFVTSGVDKIRLT 131
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+P I ++ + L +K ++ L + ++
Sbjct: 132 GGEPTIRKD--IEDICLHLSGLKGLKTLAMTTNGLVLSK 168
>gi|218190442|gb|EEC72869.1| hypothetical protein OsI_06637 [Oryza sativa Indica Group]
Length = 391
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + + L C + C++C + V + +LS + +A + S + ++ T
Sbjct: 73 RFHNYLRISLTERCNLRCQYCMPAQGVQLTPNSELLSHDEIIR-VAGLFVTSGVDKIRLT 131
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+P I ++ + L +K ++ L + ++
Sbjct: 132 GGEPTIRKD--IEDICLHLSGLKGLKTLAMTTNGLVLSK 168
>gi|215769204|dbj|BAH01433.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 288
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + + L C + C++C + V + +LS + +A + S + ++ T
Sbjct: 76 RFHNYLRISLTERCNLRCQYCMPAQGVQLTPNSELLSHDEIIR-VAGLFVTSGVDKIRLT 134
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+P I ++ + L +K ++ L + ++
Sbjct: 135 GGEPTIRKD--IEDICLHLSGLKGLKTLAMTTNGLVLSK 171
>gi|195017548|ref|XP_001984617.1| GH14930 [Drosophila grimshawi]
gi|193898099|gb|EDV96965.1| GH14930 [Drosophila grimshawi]
Length = 382
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ G H Y L C + C +C E V Q + L + + LA I +
Sbjct: 59 TDTFGRHHTYLRISL---TERCNLRCEYCMPAEGVPLQPKSQLLTTEEVLRLARIFVEQG 115
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ ++ TGG+P + + ++ L+ + ++ + +
Sbjct: 116 VRKIRLTGGEPTVRRD--IVDIVAHLKALPQLENVGITTNG 154
>gi|187779452|ref|ZP_02995925.1| hypothetical protein CLOSPO_03048 [Clostridium sporogenes ATCC
15579]
gi|187773077|gb|EDU36879.1| hypothetical protein CLOSPO_03048 [Clostridium sporogenes ATCC
15579]
Length = 292
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 21/148 (14%)
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
+V + ++ ++ + I ++ FTGG+PLIL + K++ I
Sbjct: 3 PEGIVKKEHDNIMRYEEIFNVVKE-ASLLGIDKIRFTGGEPLILKD--IDKLIYNTSKIS 59
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE-----FS-----EEA 223
++ + + + R+ LK + I + E + +
Sbjct: 60 SIKDIAMTTNA-TLLEDRVEDLKKAGLKR------VNISLDSLKEDRFKSITRGGDINKV 112
Query: 224 IAAISRLANAGI-ILLSQSVLLKGINDD 250
+I + + GI + +V++KGINDD
Sbjct: 113 FKSIEKSLSIGIRPIKINTVIMKGINDD 140
>gi|115445395|ref|NP_001046477.1| Os02g0258900 [Oryza sativa Japonica Group]
gi|113536008|dbj|BAF08391.1| Os02g0258900 [Oryza sativa Japonica Group]
gi|215713521|dbj|BAG94658.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 394
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + + L C + C++C + V + +LS + +A + S + ++ T
Sbjct: 76 RFHNYLRISLTERCNLRCQYCMPAQGVQLTPNSELLSHDEIIR-VAGLFVTSGVDKIRLT 134
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+P I ++ + L +K ++ L + ++
Sbjct: 135 GGEPTIRKD--IEDICLHLSGLKGLKTLAMTTNGLVLSK 171
>gi|47497880|dbj|BAD20064.1| putative molybdenum cofactor biosynthesis protein A [Oryza sativa
Japonica Group]
gi|47497904|dbj|BAD20110.1| putative molybdenum cofactor biosynthesis protein A [Oryza sativa
Japonica Group]
Length = 393
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + + L C + C++C + V + +LS + +A + S + ++ T
Sbjct: 75 RFHNYLRISLTERCNLRCQYCMPAQGVQLTPNSELLSHDEIIR-VAGLFVTSGVDKIRLT 133
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
GG+P I ++ + L +K ++ L + ++
Sbjct: 134 GGEPTIRKD--IEDICLHLSGLKGLKTLAMTTNGLVLSK 170
>gi|148547529|ref|YP_001267631.1| radical SAM domain-containing protein [Pseudomonas putida F1]
gi|148511587|gb|ABQ78447.1| Radical SAM domain protein [Pseudomonas putida F1]
Length = 476
Score = 39.5 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 81/227 (35%), Gaps = 34/227 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTG 151
+ ++L + C + C +C++ ++ G +S+ EA++ + Q + V+F G
Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTATAEASVEMLLKESPNEQRYSVVFFG 161
Query: 152 GDPLI---LSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G+PL L + + K V+ + + + E+I L +
Sbjct: 162 GEPLSNRPLIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEEIIDWLNAHRFGL 215
Query: 208 YIAIHANHPYEF------------SEEAIAAISRL---ANAGIILLSQSVLLKGINDDPE 252
I + P + + + + L + ++ L +GI D
Sbjct: 216 SI--SIDGPKTVHDRNRITVGGQGTYDVVRRKADLLLSRYTSRPVGARVTLTRGITDVET 273
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
I +L + + D + F LT +E ++ A++K
Sbjct: 274 IWNHLFNEMGFAEVGFAPVTSGD----MADFNLTGDELVQVFANMKA 316
>gi|310828943|ref|YP_003961300.1| thiamine biosynthesis protein ThiH [Eubacterium limosum KIST612]
gi|308740677|gb|ADO38337.1| thiamine biosynthesis protein ThiH [Eubacterium limosum KIST612]
Length = 472
Score = 39.5 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L E + + +S K I + Y +RI++ + C C +C
Sbjct: 49 THREAAVLLECELEDENEKMYSLAKKIKQKFYGNRIVMFAPLYLSNYCINGCVYCPYHRQ 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ L+ ++ + +Q+ + TG DP + + + +KT+ IKH
Sbjct: 109 NKHIRRKKLTQEEIRDEVIALQDMGHKRLALETGEDPANNPIEYVLESIKTIYGIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ +
Sbjct: 169 AIRRVNVNIAATTVENYK 186
>gi|283956404|ref|ZP_06373884.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
1336]
gi|283792124|gb|EFC30913.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
1336]
Length = 416
Score = 39.5 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ +K+ C C +C + G + K + + E++ TG +
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKS--RSVDEKALLKQVEILGANGY-SEIVLTGTN 188
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K L K+L+ + I ++ +R S ++P +I+ ++ L E ++
Sbjct: 189 IGSYGLKNGTSLGKLLRKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLERHLH 244
Query: 211 IHANHPYE 218
I H E
Sbjct: 245 IALQHTSE 252
>gi|254168775|ref|ZP_04875616.1| probable molybdenum cofactor biosynthesis protein A
[Aciduliprofundum boonei T469]
gi|197622212|gb|EDY34786.1| probable molybdenum cofactor biosynthesis protein A
[Aciduliprofundum boonei T469]
Length = 300
Score = 39.5 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C R + ++ + E L I + I +V FTGG+PL +
Sbjct: 8 VTERCNLNCFYCHREGEWHR-HHSEMTPDEIERILK-IARELDIRKVKFTGGEPLCRND 64
>gi|222480620|ref|YP_002566857.1| MiaB-like tRNA modifying enzyme [Halorubrum lacusprofundi ATCC
49239]
gi|222453522|gb|ACM57787.1| MiaB-like tRNA modifying enzyme [Halorubrum lacusprofundi ATCC
49239]
Length = 434
Score = 39.5 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+L + C C +C + G + ++ E A A + + E+ TG D +
Sbjct: 126 ILPIARGCMSNCSYCITKFATGR-VDSPTVEENVEKARALV--HAGAKEIRVTGQDTGVY 182
Query: 158 S----HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
++L ++L + I +R P I+ EL + +
Sbjct: 183 GWDNGDRKLPELLDRICDIDGDFRVRLGMANPGGIHG-IHEELAEVFAD 230
>gi|329897311|ref|ZP_08272029.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium
IMCC3088]
gi|328921242|gb|EGG28641.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium
IMCC3088]
Length = 329
Score = 39.5 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 28/199 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C +M + +LS ++ A E ++ TGG+PLI
Sbjct: 17 VTDRCDFRCVYCMAEDMTFLPRKEILSLEELSEIGAAFVELGG-KKIRLTGGEPLIRKD- 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI--AIHANHPYE 218
K++++L + ++ L + L + N
Sbjct: 75 -FIKLVESLGALAGLEQLAITTNGS-------------QLSSCADKLAAAGVTSLN--VS 118
Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
A + G + +L GI +R L ++ D A
Sbjct: 119 LDSLDAAKFKTITRTG----DLTKVLAGIEAAQAAGIKNIR----LNSVILQTYNLDDVA 170
Query: 279 GTSHFRLTIEEGQKIVASL 297
F + + +
Sbjct: 171 ALIDFAIDKRIDIAFIEEM 189
>gi|260911507|ref|ZP_05918095.1| Fe-S oxidoreductase [Prevotella sp. oral taxon 472 str. F0295]
gi|260634371|gb|EEX52473.1| Fe-S oxidoreductase [Prevotella sp. oral taxon 472 str. F0295]
Length = 446
Score = 39.5 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 75/221 (33%), Gaps = 28/221 (12%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ R LK+ C +C +C G + +SS + A
Sbjct: 143 TFAPSCSRGNRTRYFLKVQDGCDYFCTYCTIPFARGFSRNPSISS-LVQQAQD--AANEG 199
Query: 144 IWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E++ TG G+ ++R ++K L ++ +Q R S ++P + ELI
Sbjct: 200 GKEIVLTGVNIGEFKGEGNERFIDLVKALDQVEGIQRFRISS----IEPNLLTDELIDYC 255
Query: 201 KEAGKPVYIAIHANHP-YEFSEEAIAAISR-----LANAGIILLSQ---------SVLLK 245
+ H + P S+E + + R L + L+ Q V++
Sbjct: 256 ATSR---AFMPHFHIPLQSGSDEVLKLMQRRYDTALFAHKVQLIKQRIPNAFIGVDVMVG 312
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
++P + L I ++ GT+ R+
Sbjct: 313 SRGEEPAYFEDCYNFLKSLDISQLHVFPYSERPGTAALRIP 353
>gi|170291224|ref|YP_001738040.1| radical SAM domain-containing protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170175304|gb|ACB08357.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 498
Score = 39.5 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 11/117 (9%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
++ LL++ C CRFC + ++ + A+ Y E+ G D
Sbjct: 181 NKFLLEISRGCGWGCRFCGMGWHWRPRLDAPMN--EVREAIEY-ASDLGFREIFIIGSDA 237
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
S K ++ L + I + P + +++ EL+ ++ G +
Sbjct: 238 --ASSKAIKDTLWEIAEIG------LKASTPSIRADQVDVELLDLIRSTGGRMITIA 286
>gi|170758363|ref|YP_001788268.1| RNA modification protein [Clostridium botulinum A3 str. Loch Maree]
gi|169405352|gb|ACA53763.1| RNA modification enzyme, MiaB family [Clostridium botulinum A3 str.
Loch Maree]
Length = 432
Score = 39.5 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 17/130 (13%)
Query: 93 YPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
Y D R LK+ C +C +C G+ + + + + E+I +
Sbjct: 138 YRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKP--EKIMEEVQKLSKH-GFKEIILS 194
Query: 151 GGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCLKE 202
G D L +L+ + ++ +Q +R S P E I LK
Sbjct: 195 GIDIASYGFDLEGKYNLTSILEEIDKVEGIQRIRIGSIDPTF----FTEEEIMRISKLKR 250
Query: 203 AGKPVYIAIH 212
++++
Sbjct: 251 FCPHFHLSLQ 260
>gi|296271625|ref|YP_003654256.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter
nitrofigilis DSM 7299]
gi|296095800|gb|ADG91750.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter
nitrofigilis DSM 7299]
Length = 482
Score = 39.5 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 69/209 (33%), Gaps = 30/209 (14%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIW 145
H++ RI + + C + C +C R+ ++ LS +D + Y+ Q
Sbjct: 33 HQHYARIHVAVAPACNIQCNYCNRKFDCSNESRPGVTSAKLSPEDAVKKVLYVGGDIQQL 92
Query: 146 EV--IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP------------IVDPQR 191
V I GD L K ++ + VD
Sbjct: 93 SVVGIAGPGDALANPKKTFDTFRMLHEKAPDQKLC-LSTNGLRLPDYVDEMVKYNVDHVT 151
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA--------ISRLANAGIILLSQSVL 243
+ + E G +Y +H NH F E I L GI++ + SVL
Sbjct: 152 VTINSVDPTGEIGAKIYPWVHWNHEKVFGAEGAKILLEQQLKGIKMLTERGILVKANSVL 211
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLH 272
+ G+ND + + EL + + +
Sbjct: 212 IPGVNDKELVNVA--KKLKELNVFLHNIM 238
>gi|254168706|ref|ZP_04875548.1| probable molybdenum cofactor biosynthesis protein A
[Aciduliprofundum boonei T469]
gi|197622332|gb|EDY34905.1| probable molybdenum cofactor biosynthesis protein A
[Aciduliprofundum boonei T469]
Length = 300
Score = 39.5 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C R + ++ + E L I + I +V FTGG+PL +
Sbjct: 8 VTERCNLNCFYCHREGEWHR-HHSEMTPDEIERILK-IARELDIRKVKFTGGEPLCRND 64
>gi|134046659|ref|YP_001098144.1| radical SAM domain-containing protein [Methanococcus maripaludis
C5]
gi|132664284|gb|ABO35930.1| Radical SAM domain protein [Methanococcus maripaludis C5]
Length = 369
Score = 39.5 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI--------FT 150
+++ CP CRFC ++ G + + E+ + ++ I V T
Sbjct: 138 IEITRGCPYNCRFCQTPQIFGKN----IRHRSIESIVKIVKTMGDIRFVTPNAFSYGSKT 193
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G P + ++L+K++K L IK + L F + V P+ + E + + + YI
Sbjct: 194 GTKP---NIEKLEKLMKHLFEIK--KRLFFGTFPSEVRPEFVTSETLDLINKYCDNRYIH 248
Query: 211 IHANHPYEFSEEAIAAISR 229
S+E + I R
Sbjct: 249 FG---AQSGSDEVLKHIRR 264
>gi|20094254|ref|NP_614101.1| organic-radical-activating enzyme [Methanopyrus kandleri AV19]
gi|19887288|gb|AAM02031.1| Organic-radical-activating enzyme [Methanopyrus kandleri AV19]
Length = 252
Score = 39.5 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 77/212 (36%), Gaps = 42/212 (19%)
Query: 103 HVCPVYCRFCFR------------REMVGSQKGTVLSSKDTEAALAYIQEKSQIWE---- 146
C + C +C R + G + + E + + E + +
Sbjct: 39 SGCNLRCAYCDEPASRSSRRRALIRRVSGEVELELPVPCGPEDVVEVLVELEDLEDTFGT 98
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAG 204
V TGG+PL+ L+++++ LR + R P R + EL +
Sbjct: 99 VSLTGGEPLVQPWGALKELIERLRE----RGFRVLLETNASLPDRAPLIDELADVVSA-- 152
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN---AGIILLSQSVLLKGINDDPEILANLMRTF 261
V + H + +F + + + R++ A ++L+ + + + ++
Sbjct: 153 -DVKLPSHGPNMDDFPDRCLRFLERISAEVYAKVVLVD--------EECYQHAESALKGL 203
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
L ++P YL A G+ H +E+ ++
Sbjct: 204 HRLGVEPIYL---QPATGSEH---DLEDLWEL 229
>gi|116748163|ref|YP_844850.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697227|gb|ABK16415.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 292
Score = 39.5 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 25/159 (15%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKD---TEAALAYIQEKSQ-IWEVIF 149
D +LL++ C C FC G+ KG KD +A + Y + V
Sbjct: 18 DSVLLQVTVGCSHNKCTFC------GTYKGERFRIKDDATIDADIRYAAGNLSFLHRVFL 71
Query: 150 TGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD LI+ RL ++++ +R + ++ + + + R PE + L+E G +
Sbjct: 72 VDGDALIIPQDRLVRIMRRIREEMPWIRRVGLYGNAKSIL--RKTPEQLAELRELGLGIV 129
Query: 209 ----------IAIHANHPYEFSEEAIAAISRLANAGIIL 237
+ N I + R+ AGI L
Sbjct: 130 YQGLESGDEQVLREINKGVSLD-RMIQSARRVREAGIKL 167
>gi|300871623|ref|YP_003786496.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000]
gi|300689324|gb|ADK31995.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000]
Length = 474
Score = 39.5 bits (91), Expect = 0.77, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 13/148 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L L + C C +C L+ + A + +Q+ + TG DP S
Sbjct: 94 LYLSNYCINGCVYCPYHAKNKHIARKQLTQDEIRAEVIALQDMGHKRLALETGEDPDYAS 153
Query: 159 HKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR-------INPELIQCLKEAGKPV 207
+ L + +KT+ IKH ++ + + V+ R L Q + KP
Sbjct: 154 MEYLLESIKTIYSIKHKNGAIRRVNVNIAATTVENYRKLKDAGIGTYVLFQ--ETYHKPT 211
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGI 235
Y +H + P E A+ R GI
Sbjct: 212 YEKVHPSGPKSNYEYHTEAMDRAMEGGI 239
>gi|325299811|ref|YP_004259728.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides salanitronis DSM 18170]
gi|324319364|gb|ADY37255.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides salanitronis DSM 18170]
Length = 158
Score = 39.5 bits (91), Expect = 0.77, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 93 YPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
YP+ I L C C+ C E G+ L+ K + ++ I+ +
Sbjct: 8 YPETIVDGEGIRFSIYLAGCSHRCKGCHNPESWNPLAGSPLTDKVIDGMISQIKANPLLD 67
Query: 146 EVIFTGGDPLILSHKRL 162
+ F+GGDP S L
Sbjct: 68 GITFSGGDPFYHSEAFL 84
>gi|239627763|ref|ZP_04670794.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517909|gb|EEQ57775.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 460
Score = 39.5 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 56/183 (30%), Gaps = 35/183 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C G + +D EA + + + EV+ TG
Sbjct: 149 HTRAFIKVQDGCNQFCSYCIIPYARGRVRSRKP--EDVEAEVEGLVARGY-KEVVLTG-- 203
Query: 154 PLILSHKRLQKV------------------LKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
+ LS ++ + + I ++ +R S P + +
Sbjct: 204 -IHLSSYGMEHREGGPVQGGNWDHGPLLDLIGRIHRIPGLERIRLGSLEPRIITEEFAEA 262
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI--SRLANAGIILLSQSVLLKGINDDPEI 253
L L + ++++ + L GI L+ D P I
Sbjct: 263 LAG-LAKFCPHFHLSLQSGCDATLKRMNRHYTTEDYLRRCGI--------LRKWFDHPAI 313
Query: 254 LAN 256
+
Sbjct: 314 TTD 316
>gi|217967463|ref|YP_002352969.1| RNA modification enzyme, MiaB family [Dictyoglomus turgidum DSM
6724]
gi|217336562|gb|ACK42355.1| RNA modification enzyme, MiaB family [Dictyoglomus turgidum DSM
6724]
Length = 441
Score = 39.5 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 18/129 (13%)
Query: 89 IVHRYPDRILLKLL-HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144
I+ R + + C +C +C + G +K ++ + ++ + +
Sbjct: 139 IIRRENKFQAWIPIIYGCNNFCTYCIVPYLRGKEKSR--DPQEIIKEIEHLANQGVVEVT 196
Query: 145 ---WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
V G D L + L +L + I ++ +RF P+ ++ +LI +
Sbjct: 197 LLGQNVDSYGKD---LGNVDLADLLVEIHKIPGIKRIRF----LTSHPRDVSDKLINVVA 249
Query: 202 EAGK--PVY 208
K P +
Sbjct: 250 THPKICPHW 258
>gi|3024141|sp|Q44118|MOAA_ARTNI RecName: Full=Probable molybdopterin cofactor synthesis protein A
gi|2288875|emb|CAA71779.1| molybdopterin co-factor synthesis protein [Arthrobacter
nicotinovorans]
Length = 355
Score = 39.5 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G+V RY R L L C + C +C E + K V+S+ + + +
Sbjct: 12 GLVDRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLSKQAVMSASEIVRIVGIGVGRLG 71
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ E+ TGG+PL+ L ++ LR
Sbjct: 72 VRELRLTGGEPLVRHD--LVDIIAELRR 97
>gi|310643623|ref|YP_003948381.1| arylsulfatase regulator (fe-s oxidoreductase) [Paenibacillus
polymyxa SC2]
gi|309248573|gb|ADO58140.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Paenibacillus
polymyxa SC2]
Length = 442
Score = 39.5 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKG 123
L ED + + + + + +R+ L+ C C +CF ++ ++
Sbjct: 60 LIECGYIVEDNMNEKAYVKVNLLKNRFESSNLMLTIAPTMACNFRCVYCFEKDQYHNKTM 119
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ +++ + K V + GG+PLI + K++ ++ + I
Sbjct: 120 SEETAQSIVNFVKTNASKLDTLNVTWYGGEPLI-AMKQIVRISEDFLEI 167
>gi|302871917|ref|YP_003840553.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
obsidiansis OB47]
gi|302574776|gb|ADL42567.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
obsidiansis OB47]
Length = 433
Score = 39.5 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 79/232 (34%), Gaps = 29/232 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C +C +C G+ + L + E + + E + TG
Sbjct: 141 RSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSL--ESIEEEVRRLVSNGY-KEFVITGIN 197
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + L V++ + I+ V+ +R S P++ ++ L+ +
Sbjct: 198 ISAYGKD--LDGKITLIDVIERINEIEGVKRIRLSSLEPLIMSEQFISRLLS-FDKLCHH 254
Query: 207 VYIAIHANHPYEF--------SEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANL 257
+++++ + + + + R+ + + ++ G + E +
Sbjct: 255 LHLSLQSGSDKILKLMNRHYTTAQYQGIVERIKEKWDDVAFTTDIIVGFPGETEEDFNDT 314
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLT-------IEEGQKIVASLKEKIS 302
++ E+ ++ GT + + E K++ + +S
Sbjct: 315 VKFVQEIGFSRIHVFRFSPKKGTKAYDMPNQIDSKEKERRSKVMKEVAANLS 366
>gi|293372994|ref|ZP_06619363.1| glycosyltransferase, group 1 family protein [Bacteroides ovatus SD
CMC 3f]
gi|292632062|gb|EFF50671.1| glycosyltransferase, group 1 family protein [Bacteroides ovatus SD
CMC 3f]
Length = 386
Score = 39.5 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 34/221 (15%), Positives = 68/221 (30%), Gaps = 39/221 (17%)
Query: 4 RHKTLTSAQDLYNANLIKKE------QIDEIKEISNHYSIALTPVIANLINPHNPNDPIA 57
RH+ + + L N ++ E ++D +K I N P +D +
Sbjct: 158 RHQLIRQLKQLRNFIVLSHEDAAEWTELDNVKVIYNPLPFF----------PERQSDGLR 207
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLK-GIVHRYPD----------------RILLK 100
+Q I + +R P ++ Y D +
Sbjct: 208 KQVIAVGRYVPQKGFDRLIPAWSIVSKKHPDWVLRIYGDGMREQLQRQIDELGITSNCIL 267
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ----EKSQ-IWEVIFTGGDPL 155
+V + ++C V S + EA + ++I G D L
Sbjct: 268 EHNVQNIVEKYCESSIFVLSSRFEGFGMVIIEAMACGVPPVSFTCPCGPKDIITDGKDGL 327
Query: 156 ILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPE 195
++ + ++ + + Y I+H + R D +R E
Sbjct: 328 LVENGDIEGLADKICYLIEHEDVRRKMGIQARTDVERFKIE 368
>gi|229820182|ref|YP_002881708.1| molybdenum cofactor biosynthesis protein A [Beutenbergia cavernae
DSM 12333]
gi|229566095|gb|ACQ79946.1| molybdenum cofactor biosynthesis protein A [Beutenbergia cavernae
DSM 12333]
Length = 360
Score = 39.5 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + + +L+ + + I E+ FTGG+PL+
Sbjct: 42 VTEKCSLRCTYCMPAEGLPLIPRSDLLTPSEIGRLVEIAVRDLGIREIRFTGGEPLVRKD 101
>gi|194333737|ref|YP_002015597.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Prosthecochloris aestuarii DSM 271]
gi|194311555|gb|ACF45950.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Prosthecochloris aestuarii DSM 271]
Length = 251
Score = 39.5 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Query: 93 YPDRI-LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP I + C + C +C E+V + L +++ E + ++ + + V+ T
Sbjct: 33 YPGMISAVLYTAGCNLRCIYCHNPELVLPDRIQRLGAEERETIVTWLVRNRMLLDAVVVT 92
Query: 151 GGDPLILSH-KRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
GG+PL+ L ++ L +K F SR+ + + + + LK
Sbjct: 93 GGEPLLHPALPGLLGWIRELGLAVKLDTNGTFPSRLQAILTEELVDHVAMDLKA 146
>gi|242281025|ref|YP_002993154.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio salexigens DSM
2638]
gi|242123919|gb|ACS81615.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio salexigens DSM
2638]
Length = 437
Score = 39.5 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 62/175 (35%), Gaps = 18/175 (10%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL+ P + + + P LK+ C CRFC + G
Sbjct: 105 STHELDQWPALAAKALRKEFPVVQQRAISTGPAYAYLKISEGCSHSCRFCTIPSIRGPHV 164
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP------LILSHKRLQKVLKTLRYIKHVQ 176
L YI + E++ G D L L+ +++ L +K ++
Sbjct: 165 SRKL--DGLVEEARYI-LDQGVPELVIVGQDTTAYGSDLDDKETNLRALIEKLLPLKGME 221
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISR 229
LR + P + ++ L +AGKP+ Y I H + + ++++ R
Sbjct: 222 WLRL----MYLYPAGLTDSMLSFLAQAGKPLLPYFDIPIQHAH---PDVLSSMGR 269
>gi|220908443|ref|YP_002483754.1| Radical SAM domain-containing protein [Cyanothece sp. PCC 7425]
gi|219865054|gb|ACL45393.1| Radical SAM domain protein [Cyanothece sp. PCC 7425]
Length = 418
Score = 39.5 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 57/199 (28%), Gaps = 19/199 (9%)
Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
Y R + +L C + C+ C R G + L++ + + + + I EV G
Sbjct: 8 YRTRYAVWELTLKCNLACQHCGSRA--GQPRTQELTTAEALDLVQQLAQ-IGIREVTLIG 64
Query: 152 GDPLILSH-KRLQKVLKTLRYIKHVQILRFH-SRVPIVDPQRINPELIQC----LKEAGK 205
G+ + + + I ++ + S QR + L+
Sbjct: 65 GEAFLRPDWLEIAAAIARAGMICNLTTGGYGLSLQLAQAMQRAGIAAVSVSIDGLETTHD 124
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ A H A + L G+ + + + L + +
Sbjct: 125 RLRGKQGAWH------SAFRTMQHLRQVGVPFACNTQINR---LSAPELPRIYEQIRDAG 175
Query: 266 IKPYYLHHPDLAAGTSHFR 284
+ + + +
Sbjct: 176 VYAWQIQLTVPMGHAADHW 194
>gi|189463972|ref|ZP_03012757.1| hypothetical protein BACINT_00307 [Bacteroides intestinalis DSM
17393]
gi|189438545|gb|EDV07530.1| hypothetical protein BACINT_00307 [Bacteroides intestinalis DSM
17393]
Length = 439
Score = 39.5 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 14/153 (9%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ HS R LK+ C YC +C G + ++S E A
Sbjct: 135 DIHSFAPSCSRGDRTRYFLKVQDGCDYYCSYCTIPFARGRSRNGTVASM-VEQARQ--AA 191
Query: 141 KSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
E++ TG GD + + ++K L ++ ++ R S ++P + E+I
Sbjct: 192 AEGGKEIVLTGVNIGDFGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEII 247
Query: 198 QCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
+ + + H + P S++ + + R
Sbjct: 248 EFVSHSRS---FMPHFHIPLQSGSDDVLKLMRR 277
>gi|164688504|ref|ZP_02212532.1| hypothetical protein CLOBAR_02149 [Clostridium bartlettii DSM
16795]
gi|164602917|gb|EDQ96382.1| hypothetical protein CLOBAR_02149 [Clostridium bartlettii DSM
16795]
Length = 445
Score = 39.5 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 57/159 (35%), Gaps = 14/159 (8%)
Query: 65 EELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EL+ + I L V LK+ C C +C ++ G +
Sbjct: 114 AELSEKHQIVSLNNIEFAYDENLPRYVSTPSHMAYLKIGEGCDNKCTYCIIPKLRGKYRS 173
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLIL-SHKRLQKVLKTLRYIKHVQIL 178
+ +D A + E+ + E++ D L L ++L +L+ L I+ + +
Sbjct: 174 RKM--EDIIAEAKKLAER-GVKELVVIAQDTTKYGLDLYGEEKLANLLEELAQIEGFKWI 230
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP 216
R P+ I EL++ +K+ Y + H
Sbjct: 231 RV----MYSYPESITEELVKVIKKYDNICNYFDMPIQHA 265
>gi|148273530|ref|YP_001223091.1| molybdenum cofactor biosynthesis protein A [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147831460|emb|CAN02420.1| putative molybdenum cofactor biosynthesis protein [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 352
Score = 39.5 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + + L + E + + +V FTGG+PL+
Sbjct: 33 LTDRCNLRCTYCMPAEGLPFTPDRQALQLAEIERLVRIGTRDLGVRQVRFTGGEPLLRRD 92
Query: 160 KRLQKVLKTLRYIK 173
L +++ +
Sbjct: 93 --LIEIIAACAALP 104
>gi|114565072|ref|YP_752586.1| molybdenum cofactor biosynthesis protein A [Shewanella
frigidimarina NCIMB 400]
gi|114336365|gb|ABI73747.1| molybdenum cofactor biosynthesis protein A [Shewanella
frigidimarina NCIMB 400]
Length = 328
Score = 39.5 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEV 147
R D + L + C C +C + K VLS ++ L++I + + + ++
Sbjct: 9 QRKVDYLRLSVTDRCDFRCVYCMSEDPTFLPKSHVLSLEE----LSWIAQAFTELGVKKI 64
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PL+ S K++K LR + ++ L +
Sbjct: 65 RLTGGEPLVRSDC--DKLVKLLRKLPQLEELSMTTNGS 100
>gi|57168872|ref|ZP_00368002.1| MiaB-like tRNA modifying enzyme [Campylobacter coli RM2228]
gi|305431977|ref|ZP_07401144.1| 2-methylthioadenine synthetase [Campylobacter coli JV20]
gi|57019708|gb|EAL56394.1| MiaB-like tRNA modifying enzyme [Campylobacter coli RM2228]
gi|304445061|gb|EFM37707.1| 2-methylthioadenine synthetase [Campylobacter coli JV20]
Length = 418
Score = 39.5 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ +K+ C C +C + G + + + + EV+ TG +
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKS--RSVDEQALLRQVEILGANGY-SEVVLTGTN 188
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K L K+L+ + I ++ +R S ++P +I+ ++ L E ++
Sbjct: 189 IGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDERWMERHLH 244
Query: 211 IHANHPYE 218
I H E
Sbjct: 245 IALQHTSE 252
>gi|325660993|ref|ZP_08149620.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 4_1_37FAA]
gi|325472500|gb|EGC75711.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 4_1_37FAA]
Length = 440
Score = 39.5 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 11/125 (8%)
Query: 97 ILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152
LK+ C +C +C R S L + E A ++E + E G
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFRSVPMEQLVHEAQELAEQGVKELILVAQETTLYGK 205
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI 211
D + K L K+LK L I ++ +R P+ I ELIQ +KE K Y+ +
Sbjct: 206 D--LYGEKSLHKLLKELCKIAGIRWIRV----LYCYPEEITDELIQVMKEESKICHYLDL 259
Query: 212 HANHP 216
H
Sbjct: 260 PIQHA 264
>gi|258405933|ref|YP_003198675.1| Radical SAM domain-containing protein [Desulfohalobium retbaense
DSM 5692]
gi|257798160|gb|ACV69097.1| Radical SAM domain protein [Desulfohalobium retbaense DSM 5692]
Length = 442
Score = 39.5 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 88/234 (37%), Gaps = 32/234 (13%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
++ LL++ C + C CF R + GT +A+I+E + + +G
Sbjct: 87 QHTCTTLLEVTQRCNLGCPICFARSL---DSGTDPDLDTLARNMAHIRETAGPCTLQLSG 143
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI-- 209
G+P + L +++ L ++ ++++ ++ + PE + L+EAG
Sbjct: 144 GEPTVRDD--LPEIV-RLAAAQNFRLVQLNTNGLRFARE---PEYARALREAGLEAVFFQ 197
Query: 210 -------AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
EE A++ + AG+ ++ L+ G+N + +
Sbjct: 198 FDSVHDADYTTIRGRALWEEKQQALTAMGRAGLGVVLVPTLVPGVNTRA------IGAIL 251
Query: 263 ELRIKPYYLHHPDLAAGTSHF--------RLTIEEGQKIVASLKEKISGLCQPF 308
++ + + S+F +I+ +L+E+ +GL +
Sbjct: 252 RFGVQHHPVVRGVHFQPISYFGRYPAPPADTDRLTLPEIMRALEEQTAGLVRTQ 305
>gi|226334870|ref|YP_002784542.1| putative molybdenum cofactor biosynthesis protein [Rhodococcus
opacus B4]
gi|226246090|dbj|BAH56190.1| putative molybdenum cofactor biosynthesis protein [Rhodococcus
opacus B4]
Length = 305
Score = 39.5 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 67/191 (35%), Gaps = 25/191 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R+ + L C + C +C G KG+ S A + + ++ +VI +GG+P
Sbjct: 6 GRLRVFLTEQCNLACFYC---HNEGQPKGSAYLSDQLFDAAVSMSRQPEVEKVILSGGEP 62
Query: 155 LILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------- 204
L+ +VL+ + + +V + ++ P L +
Sbjct: 63 LLHP-----RVLELVEAVSPNVARSSLITNGLLLTPSLARDLAFAGLSKIRLGVDSFRED 117
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
KP + + P+ + A AG+ + VL + + E+ L V
Sbjct: 118 KPRPSVGYLDDPFSIDDTVAAV----REAGLAVEVNVVLTRF--NQREVPRFLRWAVV-N 170
Query: 265 RIKPYYLHHPD 275
+ + H +
Sbjct: 171 GVNIKFFEHLE 181
>gi|212531865|ref|XP_002146089.1| molybdopterin cofactor biosynthetic protein [Penicillium marneffei
ATCC 18224]
gi|210071453|gb|EEA25542.1| molybdopterin cofactor biosynthetic protein [Penicillium marneffei
ATCC 18224]
Length = 680
Score = 39.5 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 31/230 (13%), Positives = 75/230 (32%), Gaps = 29/230 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
HR D + + + C + C +C E V L + L+ + + ++ T
Sbjct: 87 HRQHDYLRISITEKCNLRCLYCMPEEGVPLSPPAHLLTTPEIVYLSSLFVSQGVTKIRLT 146
Query: 151 GGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDP-----------------QR 191
GG+P + L +++ + + ++ L + +
Sbjct: 147 GGEPTVRKD--LVPMMQAIGDLRKDGLKELCLTTNGISLHRKLDAMAEAGLTGVNLSLDT 204
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
++P + + N E + + NAGI L V+++G+N+
Sbjct: 205 LDPFKYTIMTRRNGFEAVMKSINRIEEMNHK--------FNAGIKLKINCVVMRGLNEHE 256
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
+ M ++ ++ D + + +E I+ ++
Sbjct: 257 IVPFVEMGREKDIEVRFIEYMPFDGNKWSEQKMVPYQEMLDIIRKSYPEL 306
>gi|312898407|ref|ZP_07757797.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
gi|310620326|gb|EFQ03896.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
Length = 217
Score = 39.5 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 48/135 (35%), Gaps = 8/135 (5%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ G R + L C + C +C ++ + + + Y
Sbjct: 5 EKFVSINGEGQRAGELALFIRFQGCNLSCTYC--DTAWANEADCPYEEESPQEIVDY-AC 61
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK-HVQILRFH--SRVPIVDPQRINPELI 197
+ + ++ TGG+PL+ + + +++ L HV+I S +P +R + +
Sbjct: 62 REGVTDITLTGGEPLLQ--EGIDELIDLLSKHGFHVEIETNGAVSLLPFCQKRRPSFTMD 119
Query: 198 QCLKEAGKPVYIAIH 212
L +G +
Sbjct: 120 YKLPGSGCEKAMMTG 134
>gi|251772238|gb|EES52808.1| RNA modification enzyme, MiaB family [Leptospirillum
ferrodiazotrophum]
Length = 456
Score = 39.5 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 74/238 (31%), Gaps = 36/238 (15%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKS 142
PL G P R +K+ C C FC G Q E+ LA ++
Sbjct: 141 PLPGARLTPPHRAYVKVSEGCDHPCTFCSIPLARGGQVSRAP-----ESILAEVRDLASR 195
Query: 143 QIWEVIFTGGDP------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
EV D L LS L +L+ + + +R P + L
Sbjct: 196 GTREVTLIAQDLTRYGQDLGLSDG-LSDLLERIDAEGGIPWVRL----LYAYPTLVTDRL 250
Query: 197 IQCLKEAGKPV-YIAIHANH--PYEFS----EEAIAAISRLANA------GIILLSQSVL 243
+ + ++ + Y+ I H + + + RL + G+ L +
Sbjct: 251 LSVMAKSRTVLPYLDIPLQHVEASVLTAMKRPGNVEFMKRLVDRVRSAIPGVTLR--TTF 308
Query: 244 LKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+ G + +LM R + GT + L + +I ++ +
Sbjct: 309 ITGFPGETEREFESLMDFVAWARFDHVGVFAFSREEGTPSYSLPDQVPHRI--RMRRR 364
>gi|295111872|emb|CBL28622.1| Predicted Fe-S oxidoreductases [Synergistetes bacterium SGP1]
Length = 358
Score = 39.5 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 32/120 (26%), Gaps = 25/120 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-------IFTG 151
+ C CR C+ + L S + +V TG
Sbjct: 9 WHITDECDQRCRHCY---IFSGDPRRKLDSMTWKQLQETFYNCLDFCDVHDRLPYFYLTG 65
Query: 152 GDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GDP++ L L I + +P + + + LK G Y
Sbjct: 66 GDPILHPD---FWRLLKLFHKHAIP---------FTIMGNPFHLTDRVCRELKSLGCQKY 113
>gi|269217914|ref|ZP_06161768.1| molybdenum cofactor biosynthesis protein A [Actinomyces sp. oral
taxon 848 str. F0332]
gi|269212849|gb|EEZ79189.1| molybdenum cofactor biosynthesis protein A [Actinomyces sp. oral
taxon 848 str. F0332]
Length = 378
Score = 39.5 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E V +L+ + + E+ + EV FTGG+PL+
Sbjct: 54 LTDKCNLRCTYCMPPEGVQPAPGERILTDAEVVRLVRIAVERLGVREVRFTGGEPLLR-- 111
Query: 160 KRLQKVLKTLRYI 172
K L++++ +
Sbjct: 112 KGLEEIVAATSSL 124
>gi|269122177|ref|YP_003310354.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Sebaldella termitidis ATCC 33386]
gi|268616055|gb|ACZ10423.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Sebaldella termitidis ATCC 33386]
Length = 163
Score = 39.5 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
C C C E G V+ SK + I + + +GGDP
Sbjct: 19 YSIYFSGCSHACPGCHNEESWNPDNGEVMDSKYFKKITDEINGNKMLSGITISGGDPFYD 78
Query: 158 SHKRLQKVLKTLRY 171
S + L L LR
Sbjct: 79 SEEFLD-FLVRLRK 91
>gi|206889422|ref|YP_002249076.1| deoxyribonuclease, TatD family [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741360|gb|ACI20417.1| deoxyribonuclease, TatD family [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 449
Score = 39.5 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE--MVGSQKGTVLSSKDTEAALAYIQE 140
P I ++ D + L + + C CRFC R V + E + I +
Sbjct: 251 DLPKGEIAYKIRDTLYLNVTNRCTNVCRFCVRFHTDYVKGHNLRLEKEPSAEDLIQTIGD 310
Query: 141 KSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQR-INPELI 197
E++F G G+P L +++V K ++ +R ++ + +R I PEL
Sbjct: 311 PKNYKEIVFCGYGEPF-LRLDLIKEVAKWIKE--QGGRVRVNTNGQGNLIHERKILPELA 367
Query: 198 QCLKEAGKPVYIAIH 212
+ + + H
Sbjct: 368 GLIDSMS--ISLNAH 380
>gi|163783641|ref|ZP_02178630.1| predicted glycyl radical activating enzyme [Hydrogenivirga sp.
128-5-R1-1]
gi|159881134|gb|EDP74649.1| predicted glycyl radical activating enzyme [Hydrogenivirga sp.
128-5-R1-1]
Length = 209
Score = 39.5 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ + C CR C +V ++ ++ + L + I ++ +GG+P +
Sbjct: 21 LVLFMKGCNFRCRHCHNWRLVVGEEKEEITER---EVLYEVSSNPVIDTLVLSGGEPTVH 77
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ K+L + ++ + +R +
Sbjct: 78 NPKKLMDFILRVKSRNPLIKIRVDTNGYA 106
>gi|255326816|ref|ZP_05367892.1| molybdenum cofactor biosynthesis protein A [Rothia mucilaginosa
ATCC 25296]
gi|255296033|gb|EET75374.1| molybdenum cofactor biosynthesis protein A [Rothia mucilaginosa
ATCC 25296]
Length = 403
Score = 39.5 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 70/205 (34%), Gaps = 15/205 (7%)
Query: 101 LLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C + K +LS+++ + + E+ FTGG+PL+ +
Sbjct: 71 LTDKCNLRCIYCMPADGLQWLPKENLLSAEEIARLADIAITELGVEEIRFTGGEPLVRAD 130
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA-NHPYE 218
L ++ + L + ++ + + V + E
Sbjct: 131 --LVDIISRIHQAHPDVPLAITTNGIGLEKR---AAALAEAGLTRINVSLDTICRETFAE 185
Query: 219 FS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+ + + I A AG + +VL+ G+NDD L+R + + ++
Sbjct: 186 LTRRDKLDAVLKGIDGAAEAGLWPIKINAVLMPGLNDDQ--APELLRWALAGGYQLRFIE 243
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASL 297
L A R +I L
Sbjct: 244 QMPLDADNRWTREGTITAAEIRQKL 268
>gi|237737359|ref|ZP_04567840.1| radical SAM domain-containing protein [Fusobacterium mortiferum
ATCC 9817]
gi|229421221|gb|EEO36268.1| radical SAM domain-containing protein [Fusobacterium mortiferum
ATCC 9817]
Length = 222
Score = 39.5 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R + L C + C +C R G L S+D I + S I + T
Sbjct: 18 RRVGQLAIFIRLQKCNLNCSYCDTRWANGDDAPYTLMSED--KIYDRILK-SGIKNITLT 74
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
GG+PL+ + +L+ + ++ L + I
Sbjct: 75 GGEPLLHKDVEI--LLEKIGENPNLS-LEIETNGSI 107
>gi|171186343|ref|YP_001795262.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
V24Sta]
gi|170935555|gb|ACB40816.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
Length = 368
Score = 39.5 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 85/241 (35%), Gaps = 35/241 (14%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-IF 149
H P + + CP+ C+ C R + + L++++ + + + + +
Sbjct: 12 HSAPLIVFWESTKACPLACKHC-RADAILRPLPGELNTEEGKRLIEQVASFGDPKPLLVI 70
Query: 150 TGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGGDPL+ + L L + + ++PE ++ ++E G
Sbjct: 71 TGGDPLMRNDLFDLVDYAVQLG---------VPTSLAPAVSPNLSPETLKAIREHGVK-A 120
Query: 209 IAIHANHPYEFSEE-----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
I+I + E + + +AAI +AG+ + +V+ + + + L
Sbjct: 121 ISISLDGAREETHDEIRGVPGSFRNTLAAIKAAVDAGVQVQVNTVVWRKSLPELPEVVKL 180
Query: 258 MRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKI---SGLCQPFYILDL 313
+ +K + + + ++ EE + + + S ++
Sbjct: 181 ITDL---GVKTWEVFFLIVTGRAREELDISPEE----YEAAVQFLVDVSTYGIQVRTVEA 233
Query: 314 P 314
P
Sbjct: 234 P 234
>gi|302671353|ref|YP_003831313.1| radical SAM domain-containing protein [Butyrivibrio proteoclasticus
B316]
gi|302395826|gb|ADL34731.1| radical SAM domain-containing protein [Butyrivibrio proteoclasticus
B316]
Length = 479
Score = 39.5 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 69/153 (45%), Gaps = 18/153 (11%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQ 121
EL D + +N + D ++ L + H C + C++CF E
Sbjct: 91 ELRASEVLYVDDVYENYVEDFQN-----RDTVIKALCLNIAHDCNLRCKYCFADEGEYHG 145
Query: 122 KGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQ 176
+ +++ + +AAL ++ + S EV F GG+PL ++ + ++K+++ R I +H +
Sbjct: 146 RRALMTEEVGKAALDFLIKNSGNRRNLEVDFFGGEPL-MNWEVVKKIVEYGRSIEKEHNK 204
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
RF + +N E+++ + + + +
Sbjct: 205 NFRFT---ITTNGTLLNDEILEYVNKEMGNIVL 234
>gi|197123601|ref|YP_002135552.1| nitrogenase cofactor biosynthesis protein NifB [Anaeromyxobacter
sp. K]
gi|196173450|gb|ACG74423.1| nitrogenase cofactor biosynthesis protein NifB [Anaeromyxobacter
sp. K]
Length = 482
Score = 39.5 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 68/229 (29%), Gaps = 35/229 (15%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + A Q+
Sbjct: 52 HHHFARMHVAVAPGCNIQCHYCNRKYDCANESRPGVVSERLSPDQALAKVRAVAAAVPQL 111
Query: 145 WEVIFTG-GDPL---------------ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
V G GDPL L L L HV+ L V
Sbjct: 112 SVVGIAGPGDPLANPGPTFQVLERIRRALPDLTLCLSTNGLALPDHVERL----VTLGVQ 167
Query: 189 PQRINPELIQCLKEAGKPVYIAI------HANHPYEFSEEAIAAISRLANAGIILLSQSV 242
+ ++ +I SE + + RL G++ SV
Sbjct: 168 HVTVTVNMVDPAVGERIHPWIVWRGRRVRGVEASRILSERQLEGLERLVAGGVLCKVNSV 227
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA-GTSHFRLTIEEG 290
++ G+ND L + R L + + A +HF L + G
Sbjct: 228 VIPGVNDAH--LPEVSRRLRALGAFLHNVMPLVSAPEHGTHFGLGGQRG 274
>gi|307243816|ref|ZP_07525947.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
gi|306492819|gb|EFM64841.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
Length = 457
Score = 39.5 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 80 DNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
++ + V+R P + L + H C + C++CF ++ K ++ + + AL Y
Sbjct: 77 EDEYKFHPSFVNRQPVVKALCLNVAHDCNLKCKYCFAKQGDFGGKAELMPLEVGKKALDY 136
Query: 138 IQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRI 192
+ S E+ F GG+PL ++ +++++K R + + +RF + +
Sbjct: 137 LIANSGNRRNLEIDFFGGEPL-MNWPVVKELVKYGREVEKPAGKNIRFT---ITTNGVLL 192
Query: 193 NPELIQCLKEAGKPVYI 209
+ E I + E V +
Sbjct: 193 DDEKIDFINEHMHNVVL 209
>gi|210630155|ref|ZP_03296270.1| hypothetical protein COLSTE_00154 [Collinsella stercoris DSM 13279]
gi|210160628|gb|EEA91599.1| hypothetical protein COLSTE_00154 [Collinsella stercoris DSM 13279]
Length = 342
Score = 39.5 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 27/151 (17%)
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G +L++++ + + K I V TGG+PL+ R+ +++ +R I ++ +
Sbjct: 11 HGELLTAEEIAHFVR-LVAKEGITRVRLTGGEPLV--SHRIVPLIEEIRAIPGIEDISLT 67
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN-----AGI- 235
+ ++ P L L++AG + E A I+RL AGI
Sbjct: 68 TNGALL------PRLAPALRDAGLNRVNI----SLDTLNPERFAQITRLGRVEQALAGID 117
Query: 236 --------ILLSQSVLLKGINDDPEILANLM 258
+ +V+++ + D LA L
Sbjct: 118 AALEYGFEPVKVNTVVVRRMRQDVLELARLS 148
>gi|197122438|ref|YP_002134389.1| lipoyl synthase [Anaeromyxobacter sp. K]
gi|196172287|gb|ACG73260.1| lipoic acid synthetase [Anaeromyxobacter sp. K]
Length = 326
Score = 39.5 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 62/191 (32%), Gaps = 28/191 (14%)
Query: 98 LLKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
++ + VC CRFC + + L+ E AL YI S + + GG
Sbjct: 86 VMLMGDVCTRGCRFCNVKTAAHPPALDPDEPRHLAEAIAELALDYIVVTSVDRDDLPDGG 145
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
++ L+ I + + + R +PE ++ + A V+
Sbjct: 146 ------AAHFADAIRRLKEIPGLLV------EVLTPDFRGDPEAVRTVGRAAPDVFANN- 192
Query: 213 ANHPYEFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ ++++ ++++S ++ G+ + + MR
Sbjct: 193 LETVRRLTPAVRDAKATYDQTLGVLAQMKREFPQVVTKSSIMVGLGEQEAEVVEAMRDLR 252
Query: 263 ELRIKPYYLHH 273
++ L
Sbjct: 253 AHGVEILTLGQ 263
>gi|149199462|ref|ZP_01876497.1| putative Fe-S oxidoreductase [Lentisphaera araneosa HTCC2155]
gi|149137397|gb|EDM25815.1| putative Fe-S oxidoreductase [Lentisphaera araneosa HTCC2155]
Length = 437
Score = 39.5 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 9/135 (6%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
N P D I + + R LK+ C C FC +
Sbjct: 122 NEKPLIIRDRIVKEDFTIDTMGQSDSKTRANLKIQDGCDFMCTFC-----IIPMARGRSR 176
Query: 128 SKDTEAALAYIQEK--SQIWEVIFTGGDPLILSH--KRLQKVLKTLRYIKHVQILRFHSR 183
S+D E L + E++ TG + + V+ L ++ ++ +R S
Sbjct: 177 SRDMENLLEEARTLIGQGFREIVITGVNVATYDSQGRTFLDVIDRLNELEGIERIRISSI 236
Query: 184 VPIVDPQRINPELIQ 198
P P++I +
Sbjct: 237 EPTTIPEKIFDYMAD 251
>gi|134094629|ref|YP_001099704.1| molybdenum cofactor biosynthesis protein A [Herminiimonas
arsenicoxydans]
gi|133738532|emb|CAL61577.1| Molybdenum cofactor biosynthesis protein A [Herminiimonas
arsenicoxydans]
Length = 373
Score = 39.5 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 17/122 (13%)
Query: 60 FIPQKEE-----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
IP + + I+P + E P G + + + + + + + C C +C
Sbjct: 5 IIPLADHRYLNRIPIIPTQLEAPSGLLSDTHARPLQ-----DLRISITDRCNFRCVYCMP 59
Query: 115 REMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH-KRLQKVLKT 168
+E+ ++LS ++ + + ++ TGG+PL+ + +RL +L
Sbjct: 60 KEVFDKDYAFLPHSSLLSFEEITRIASLFVAH-GVEKIRLTGGEPLLRKNVERLIAMLSA 118
Query: 169 LR 170
LR
Sbjct: 119 LR 120
>gi|327537949|gb|EGF24646.1| RNA modification enzyme, MiaB family [Rhodopirellula baltica WH47]
Length = 428
Score = 39.5 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 72/215 (33%), Gaps = 32/215 (14%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREM 117
+P E+ E D +G + + + R +K+ C + C +C M
Sbjct: 90 ALPGVVEVLTDKRELGDLMGRFGVIDVPTGLSGFAGRKRAYVKVQDGCLLRCSYCI-IPM 148
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------------HKRLQ 163
V + + S + + + EVI TG + L RL
Sbjct: 149 VRPKLHSRPSQEIVDEVTRLVDAGH--REVILTG---IHLGHYGVDWNRNKPREEWVRLA 203
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
++K L I +R S ++ + ELI + E V +H +
Sbjct: 204 HLVKDLCQIPGQFRIRMSS----IEATEVTRELIGVMAEFPDKVVPHLHLC----LQSGS 255
Query: 224 IAAISRLANA-GIIL-LSQSVLLKGINDDPEILAN 256
+ + R+ G + L + LL+ D P I +
Sbjct: 256 DSVLRRMRRRWGTKMFLDRCRLLRESLDRPAITTD 290
>gi|311993060|ref|YP_004009926.1| anaerobic NTP reductase, small subunit [Enterobacteria phage CC31]
gi|284177898|gb|ADB81564.1| anaerobic NTP reductase, small subunit [Enterobacteria phage CC31]
Length = 161
Score = 39.5 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + C C C+ + + GT + + E + + I + TGGD
Sbjct: 15 PGCRVVLFVTGCLHKCEGCYNKSTWNPRNGTEFTGETIEEIRELLSKD-YIQGITLTGGD 73
Query: 154 PLILSHKR--LQKVLKTL-RYIKH 174
PL R ++ +LK L H
Sbjct: 74 PLY-PDNRETIEALLKCLHNSHPH 96
>gi|170754837|ref|YP_001782699.1| radical SAM domain-containing protein [Clostridium botulinum B1
str. Okra]
gi|169120049|gb|ACA43885.1| radical SAM domain protein [Clostridium botulinum B1 str. Okra]
Length = 455
Score = 39.5 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLIL 157
+ H C + C++CF E K ++S + + A+ ++ EKS EV GG+PL +
Sbjct: 101 IAHDCNLRCKYCFADEGEYKGKRELMSPEVGKKAIDFVIEKSGPRKNIEVDLFGGEPL-M 159
Query: 158 SHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ ++++++ + + H + +RF + +N E+++ L + + + +
Sbjct: 160 AFSTIKEIVEYAKEQEEKHNKTIRFT---MTTNGTLLNQEIMEYLDKNMGNIVL--SIDG 214
Query: 216 PYEFSEEAIAAIS 228
E ++ +
Sbjct: 215 RKEINDNVRVRVD 227
>gi|89896712|ref|YP_520199.1| hypothetical protein DSY3966 [Desulfitobacterium hafniense Y51]
gi|89336160|dbj|BAE85755.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 323
Score = 39.5 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 7/101 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQI 144
+ +Y +I + C + C++C E V +L+ ++ + I
Sbjct: 1 MQDQYRRQIEYLRISITDRCNLRCKYCMPAEGVQWIPHERILTYEEILRVMR-ISTTLGF 59
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
TGG+PLI L+ L+ I V+ L +
Sbjct: 60 RRFRITGGEPLI-RAGVLE-FLQNASQIPGVEDLMLTTNGI 98
>gi|317124847|ref|YP_004098959.1| GTP cyclohydrolase subunit MoaA [Intrasporangium calvum DSM 43043]
gi|315588935|gb|ADU48232.1| GTP cyclohydrolase subunit MoaA [Intrasporangium calvum DSM 43043]
Length = 350
Score = 39.5 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 83/214 (38%), Gaps = 24/214 (11%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + + +LS ++ + + +V TGG+PL+
Sbjct: 39 VTDRCNLRCTYCMPAEGLPWMPQAEMLSDEEMLRLIGLFVRD-GVTQVRLTGGEPLLR-- 95
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
+ L ++ + ++ + + + + L AG + + +
Sbjct: 96 RSLVDLVAGIASLEPRPRIAMTTNGVGL------DRIAHRLAAAGLD-RVNVSLDTIDSE 148
Query: 220 S----------EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ + + A+AG+ + +V ++G+ND +A++++ +E +
Sbjct: 149 TFTRLTRRDRLPDVELGLKAAADAGLTPVKVNAVAMRGVNDQS--VADVLQWCLERGYEL 206
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
++ L A + R + ++ A+L ++ S
Sbjct: 207 RFIEQMPLDAQHAWDRGDMVTADEVRATLSKRFS 240
>gi|221067914|ref|ZP_03544019.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
KF-1]
gi|220712937|gb|EED68305.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
KF-1]
Length = 380
Score = 39.5 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 16/122 (13%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRR 115
IP +E P G++ R L + + C C +C +
Sbjct: 5 VIPLVDERA-ASRSAIVPSPLQA---PTGLLQDQWGRPLRDLRISVTDRCNFRCNYCMPK 60
Query: 116 EMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
E+ ++LS ++ + ++ TGG+PL+ + ++ ++ L
Sbjct: 61 EVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGEPLLRKN--IEALIAQLA 117
Query: 171 YI 172
+
Sbjct: 118 EL 119
>gi|167032510|ref|YP_001667741.1| molybdenum cofactor synthesis domain-containing protein
[Pseudomonas putida GB-1]
gi|166858998|gb|ABY97405.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida
GB-1]
Length = 322
Score = 39.5 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C LS+ +AY+ E + + + TGG+PLI
Sbjct: 17 LTAACNYACTYCVPDGKRLVAAQDELSADSLARGVAYLIEAAGVERLRITGGEPLISP-- 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
RL L + + + + +
Sbjct: 75 RLDAFLAGVAKLD-LDDISLTTNG 97
>gi|70729189|ref|YP_258925.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
Pf-5]
gi|68343488|gb|AAY91094.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
Pf-5]
Length = 322
Score = 39.5 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + C C +C LS++ +AY+ E + I + T
Sbjct: 8 RRFRNLRISL-TSACNYACTYCVPNGKRLVAAQDELSAEAMARGVAYLMEAAGIERLRIT 66
Query: 151 GGDPLILSHKRLQKVLKTLRYI 172
GG+PL+ +L+ + + +
Sbjct: 67 GGEPLVSP--KLEAFMGAVGRM 86
>gi|57237169|ref|YP_178181.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
RM1221]
gi|81557615|sp|Q5HX04|MOAA_CAMJR RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|57165973|gb|AAW34752.1| molybdenum cofactor biosynthesis protein [Campylobacter jejuni
RM1221]
Length = 320
Score = 39.5 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C C +C + K +LS ++ I ++ TGG+PL+
Sbjct: 17 VTQRCNFRCLYCMPKIPFDYQPKENLLSFEEL-FLFVKAAMDEGIEKIRITGGEPLLRKD 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
L +K + K L +
Sbjct: 76 --LSIFIKMISDYKSDIDLAITTNGF 99
>gi|307354666|ref|YP_003895717.1| Radical SAM domain-containing protein [Methanoplanus petrolearius
DSM 11571]
gi|307157899|gb|ADN37279.1| Radical SAM domain protein [Methanoplanus petrolearius DSM 11571]
Length = 426
Score = 39.5 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 68/198 (34%), Gaps = 45/198 (22%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----VIFT 150
R ++ + C + C +C+ G+ +S + + A+ I++++ + ++
Sbjct: 88 RFVIITTYKCNLACSYCYEGR--GTVVSEDMSPEIRDKAIEAIKKRALPTDCKSLKIMLF 145
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCLKEA 203
GG+PL+ L ++K L R+ + + +L+ +
Sbjct: 146 GGEPLMNPDTGLV-IMKELS--------RWCGENGLKYEGSMVTNGTLATRDLVDKFRPY 196
Query: 204 GKPVYIAIHANHPYEFSE-------------EAIAAISRLANAGI--ILLSQSVLLKGIN 248
V + + P E+ + + + AI +AGI L Q
Sbjct: 197 ISTVQL--TLDGPKEYHDGIRVFKNGSGTYGKVMDAIKAFRSAGIFVALRIQVN-----E 249
Query: 249 DDPEILANLMRTFVELRI 266
++ +L L I
Sbjct: 250 NNVGLLDTLKEELDRNGI 267
>gi|291547693|emb|CBL20801.1| Organic radical activating enzymes [Ruminococcus sp. SR1/5]
Length = 149
Score = 39.5 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 12/132 (9%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ G R + C + C +C + ++ E L++I+E
Sbjct: 8 EKFVSINGEGRRAGELAAFIRFKGCNLQCSYCDTSWANEPGCESERLTE--EEILSWIRE 65
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+ V TGG+PL+ K ++++++ + Q + + + L
Sbjct: 66 T-GVKNVTLTGGEPLLR--KGMEELIEAILEDPS-QRVEIETNGSVDLKP------YHIL 115
Query: 201 KEAGKPVYIAIH 212
K +I H
Sbjct: 116 KNVRPLPWIIKH 127
>gi|167579900|ref|ZP_02372774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis TXDOH]
Length = 457
Score = 39.5 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 52/180 (28%), Gaps = 40/180 (22%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203
Query: 154 -----PLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L + ++ + I ++ +R+ + P+ L+ + K
Sbjct: 204 NAYRGALTAGAHEIADFATLIEYVADIPGIERIRYTTS----HPKEFTQRLLDVYAKVPK 259
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ H + P R+ + +G +L+R +R
Sbjct: 260 ---LVDHLHLP------VQHGSDRIL---------MAMKRGYT--VLEYKSLIRKLRAIR 299
>gi|83719624|ref|YP_441148.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
thailandensis E264]
gi|167617973|ref|ZP_02386604.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis Bt4]
gi|257140190|ref|ZP_05588452.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis E264]
gi|123537978|sp|Q2T101|MIAB_BURTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|83653449|gb|ABC37512.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis E264]
Length = 457
Score = 39.5 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 52/180 (28%), Gaps = 40/180 (22%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203
Query: 154 -----PLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L + ++ + I ++ +R+ + P+ L+ + K
Sbjct: 204 NAYRGALTAGAHEIADFATLIEYVADIPGIERIRYTTS----HPKEFTQRLLDVYAKVPK 259
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ H + P R+ + +G +L+R +R
Sbjct: 260 ---LVDHLHLP------VQHGSDRIL---------MAMKRGYT--VLEYKSLIRKLRAIR 299
>gi|308232336|ref|ZP_07415756.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu001]
gi|308372426|ref|ZP_07428640.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu004]
gi|308373630|ref|ZP_07433114.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu005]
gi|308378192|ref|ZP_07481852.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu009]
gi|308379413|ref|ZP_07486196.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu010]
gi|308380573|ref|ZP_07490415.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu011]
gi|308214306|gb|EFO73705.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu001]
gi|308333330|gb|EFP22181.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu004]
gi|308336984|gb|EFP25835.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu005]
gi|308353341|gb|EFP42192.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu009]
gi|308357175|gb|EFP46026.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu010]
gi|308361126|gb|EFP49977.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu011]
Length = 344
Score = 39.5 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
++ C + CR+C E + +LS K+ A + + +V TGG+PLI
Sbjct: 18 VIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIRPD 76
Query: 160 KRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRIN 193
L ++++TL ++ L + ++ R++
Sbjct: 77 --LPEIVRTLSAKVGEDSGLRDLAITTNG-VLLADRVD 111
>gi|95931014|ref|ZP_01313742.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
gi|95132910|gb|EAT14581.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
Length = 837
Score = 39.5 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 74/237 (31%), Gaps = 36/237 (15%)
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
P+ +H DR+ +++ C CRFC + + ++ + +
Sbjct: 242 PDKPVIPFMHTVHDRVAVEIARGCTRGCRFCQAGYIYRPVRER--KAETIAKLIDNALKH 299
Query: 142 SQIWEV---IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
S EV + GD L+ ++ R +P + + ELI+
Sbjct: 300 SGYDEVSLLSLSSGD-YTAIEPLLKHLMARYAE------ERVAVSLPSLRVGSLTDELIE 352
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+++ K + + EA RL + ++++ + + D + L
Sbjct: 353 EVRKVRKTGFT---------LAPEA--GTDRLRD----VINKGIKADDLLDTARTIYTLG 397
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG----LCQPFYIL 311
++L Y +E +++ K G + ++
Sbjct: 398 WRLIKL-----YFMMGLPTETRDDLDAIVELARQVKRCAKGTEGGGDVNVAVSTFVP 449
>gi|326407735|gb|ADZ64806.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
subsp. lactis CV56]
Length = 275
Score = 39.1 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 73/257 (28%), Gaps = 77/257 (29%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM +S +D E Y+++ V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKE-ISKEDLEKIAYYLEKYKVPL-VAICGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P++ +L ++ L H
Sbjct: 68 PILHP--KLIDFVQLLSE----------------------------------------HK 85
Query: 214 NHPYEFSEEAIAAIS---RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
N+P + + +L +AGI ++++ I
Sbjct: 86 NYPTIATNAVDVSYKYLYQLKSAGI------------------------RYLQIGIDSLR 121
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
D H R +E+ K + L + G G K+ K+
Sbjct: 122 YSKLDNYKENGHLR-KVEKTVKYLKEL-GILYGFATCV-TRKNIGELSKIV---SYAKET 175
Query: 331 GNGSYCITDHHNIVHDY 347
G ++ + Y
Sbjct: 176 GAELLKLSTYDGENQVY 192
>gi|320355186|ref|YP_004196525.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
DSM 2032]
gi|320123688|gb|ADW19234.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
Length = 351
Score = 39.1 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++L L C + CR+C+ + G Q + S E A A S + TGG+P +
Sbjct: 18 LILALTTRCNLRCRYCYHGDTPGRQD---MGSATLERAFARAASGSGPLHIQLTGGEPCL 74
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+ +++ + R + + S + P+ I EL +
Sbjct: 75 VPD-LIEEACERARSLSRPYTMGLQSNGTCLTPEVI--ELCRTF 115
>gi|303245617|ref|ZP_07331900.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio fructosovorans
JJ]
gi|302492880|gb|EFL52745.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio fructosovorans
JJ]
Length = 432
Score = 39.1 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 21/177 (11%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL+++P +G + +P P LK+ C CR+C + G
Sbjct: 105 LPT--ELDLIPGRLATALGADADAPAGRRSSTPPSYAYLKIAEGCDHACRYCTIPAIRGK 162
Query: 121 ------QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ + + +V G D + + L+ +L+ L +
Sbjct: 163 LASRPIDGLITEAKGLIDQGARELV--LVAQDVTAYGRDLGM--KEGLKALLEKLLPLPG 218
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISR 229
+ LR + P + L+ L AG+P Y I H E +AA++R
Sbjct: 219 LSWLRL----LYLYPSGVTESLLSFLAGAGRPFVPYFDIPFQH---VHPEMLAAMAR 268
>gi|149926429|ref|ZP_01914690.1| molybdenum cofactor biosynthesis protein A [Limnobacter sp. MED105]
gi|149824792|gb|EDM84006.1| molybdenum cofactor biosynthesis protein A [Limnobacter sp. MED105]
Length = 372
Score = 39.1 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C + + +LS ++ E + ++ TGG+PL
Sbjct: 45 VTDRCNFRCVYCMPKSIFDKDYQFLPHKDLLSFEEIERVAREFVA-LGVEKIRLTGGEPL 103
Query: 156 ILSH-KRLQKVLKTLR 170
+ + + L + L LR
Sbjct: 104 LRKNIEILIEQLARLR 119
>gi|297588452|ref|ZP_06947095.1| 2-methylthioadenine synthetase [Finegoldia magna ATCC 53516]
gi|297573825|gb|EFH92546.1| 2-methylthioadenine synthetase [Finegoldia magna ATCC 53516]
Length = 430
Score = 39.1 bits (90), Expect = 0.91, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 15/111 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG- 151
R +K+ C +C +C + + S++ + + + E++ TG
Sbjct: 142 TRSYIKIQEGCSQFCSYC-----IIPYARGPIRSRNIRDIVLEAKRLSDNGFKEIVLTGI 196
Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
D L + L V++ + I ++ +R S P + ++ L
Sbjct: 197 HVASYGKD-LDNNDIGLIDVIEDIGQIDKIKRIRLSSLEPRIVDKQFLDRL 246
>gi|169835697|ref|ZP_02868885.1| putative anaerobic ribonucleoside-triphosphate reductase activating
protein [candidate division TM7 single-cell isolate
TM7a]
Length = 157
Score = 39.1 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
C C C G L+ + E I E + + + +GGDPL
Sbjct: 19 YSLYFAGCSHACPGCHNEYSWNPNHGNTLTYEILEKIAKEINENTLLDGITISGGDPLFN 78
Query: 158 SHKRLQKVLKTLRY 171
L KVLK L+
Sbjct: 79 PIDML-KVLKFLKE 91
>gi|170761673|ref|YP_001788384.1| radical SAM domain-containing protein [Clostridium botulinum A3
str. Loch Maree]
gi|169408662|gb|ACA57073.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 455
Score = 39.1 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLIL 157
+ H C + C++CF E K ++S + + A+ ++ EKS EV GG+PL +
Sbjct: 101 IAHDCNLRCKYCFADEGEYKGKRELMSPRVGKKAIDFVIEKSGPRKNIEVDLFGGEPL-M 159
Query: 158 SHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ ++++++ + + H +I+RF + +N E+++ L + + + +
Sbjct: 160 AFSTIKEIVEYAKEQEEKHNKIIRFT---MTTNGTLLNQEIMEYLDKNMGNIVL--SIDG 214
Query: 216 PYEFSEEAIAAIS 228
E ++ +
Sbjct: 215 RKEINDNVRVRVD 227
>gi|91788157|ref|YP_549109.1| molybdenum cofactor biosynthesis protein A [Polaromonas sp. JS666]
gi|91697382|gb|ABE44211.1| GTP cyclohydrolase subunit MoaA [Polaromonas sp. JS666]
Length = 375
Score = 39.1 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE+ + ++LS ++ + ++ TGG+PL
Sbjct: 47 VTDRCNFRCSYCMPREVFDKDYAFLPQSSLLSFEEITRLAKIFVAH-GVEKIRLTGGEPL 105
Query: 156 ILSHKRLQKVLKTLRYI 172
+ K L+ +++ L +
Sbjct: 106 LR--KHLEVLIEMLAKL 120
>gi|308369956|ref|ZP_07419659.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu002]
gi|308325958|gb|EFP14809.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu002]
Length = 351
Score = 39.1 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
++ C + CR+C E + +LS K+ A + + +V TGG+PLI
Sbjct: 25 VIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIRPD 83
Query: 160 KRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRIN 193
L ++++TL ++ L + ++ R++
Sbjct: 84 --LPEIVRTLSAKVGEDSGLRDLAITTNG-VLLADRVD 118
>gi|305664218|ref|YP_003860506.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230]
gi|304378787|gb|ADM28626.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230]
Length = 306
Score = 39.1 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 84/258 (32%), Gaps = 37/258 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ H C +C +C + L++ + ++A I + I E TGG+PL+
Sbjct: 17 VTHECNYHCVYCHMEGWGVYRHKEFLNANEI-RSIAEIAMELGINEFKITGGEPLVRRD- 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC-LKE--------AGKPVYIAI 211
+++ + I ++ + +L++ LK + +
Sbjct: 75 ----IIEIVSSIASLKPKDLSMTTNGYFLHILAEKLVEAGLKRINVSIPSLSREKYRYIT 130
Query: 212 HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ E + I + + G+ L V+LK INDD + + IK +
Sbjct: 131 GIDSL----EIVLDGIKKALDVGLTPLTINIVVLKNINDDEYLEFIKFASRFNGNIKIRF 186
Query: 271 LHH---PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
+ S + +++E +K + S+ YI D + +
Sbjct: 187 IELEPITIPRNIFSKYYISLETIEKYIESI-------AVKKYIRD-------IHARPVYV 232
Query: 328 KKVGNGSYCITDHHNIVH 345
G + N
Sbjct: 233 LYNGIEIELVRWLGNRQF 250
>gi|302866329|ref|YP_003834966.1| radical SAM domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302569188|gb|ADL45390.1| Radical SAM domain protein [Micromonospora aurantiaca ATCC 27029]
Length = 303
Score = 39.1 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ + G YP I + C + C FC L + + + L+ +
Sbjct: 7 ESGTREPGPPFAYPSSIDINPTARCNLRCTFC---WGPDHDIRDGLDTAEWKDLLSRFRA 63
Query: 141 KSQIWEVIFTGGDPLILSH 159
V+FTGG+PL+
Sbjct: 64 -GGTSAVVFTGGEPLLRRD 81
>gi|255525323|ref|ZP_05392263.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
gi|296188191|ref|ZP_06856583.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
gi|255510995|gb|EET87295.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
gi|296047317|gb|EFG86759.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
Length = 436
Score = 39.1 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 29/137 (21%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C G+ + + + + E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCSYCLIPFARGAVCSK--PPEKIISEVKELAAH-GFKEIILSGIH 197
Query: 152 ---------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK- 201
D +LS VL+ + I ++ +R S +DPQ +I+ +
Sbjct: 198 TASYGVDLEEDCSLLS------VLEQIDKIPGIERVRIGS----IDPQFFTEGVIERISV 247
Query: 202 ----EAGKPVYIAIHAN 214
+ + N
Sbjct: 248 LKKLCPHFHLSLQSGCN 264
>gi|126736664|ref|ZP_01752403.1| molybdenum cofactor biosynthesis protein A [Roseobacter sp. CCS2]
gi|126713779|gb|EBA10651.1| molybdenum cofactor biosynthesis protein A [Roseobacter sp. CCS2]
Length = 359
Score = 39.1 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 57/164 (34%), Gaps = 25/164 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 45 VTDRCDFRCVYCMSENMTFLPKKELLTLEELDRMCSAFVR-LGVRKLRITGGEPLVRRD- 102
Query: 161 RLQKVLKTLRYI-KHVQILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIAIHANHP 216
++ R + +H+ H + ++ +L + + +
Sbjct: 103 ----IMTFFRSMSRHLDSGALHELTLTTNGSQLEKYADDLFAAGVRR-----VNVSLDTL 153
Query: 217 YE-----FS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + + + I AG+ + SV LKG N+D
Sbjct: 154 DEAKFADITRWGRLPQVMRGIDAAQKAGLRVKINSVALKGFNED 197
>gi|26990174|ref|NP_745599.1| radical SAM domain protein [Pseudomonas putida KT2440]
gi|24985113|gb|AAN69063.1|AE016539_4 hypothetical protein PP_3461 [Pseudomonas putida KT2440]
Length = 476
Score = 39.1 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 81/227 (35%), Gaps = 34/227 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTG 151
+ ++L + C + C +C++ ++ G +S+ EA++ + Q + V+F G
Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTTTAEASVEMLLKESPNEQRYSVVFFG 161
Query: 152 GDPLI---LSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G+PL L + + K V+ + + + E+I L +
Sbjct: 162 GEPLSNRPLIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEEIIDWLNAHRFGL 215
Query: 208 YIAIHANHPYEF------------SEEAIAAISRL---ANAGIILLSQSVLLKGINDDPE 252
I + P + + + + L + ++ L +GI D
Sbjct: 216 SI--SIDGPKTVHDRNRITVGGQGTYDVVRRKADLLLSRYTSRPVGARVTLTRGITDVET 273
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
I +L + + D + F LT EE ++ A++K
Sbjct: 274 IWNHLFNEMGFAEVGFAPVTSGD----MADFNLTGEELVQVFANMKA 316
>gi|312962557|ref|ZP_07777047.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
WH6]
gi|311283137|gb|EFQ61728.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
WH6]
Length = 322
Score = 39.1 bits (90), Expect = 0.95, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + C C +C LS++ +AY+ E + I + T
Sbjct: 8 RRFRNLRISL-TSACNYACTYCVPNGKRLVAAQDELSAEAMARGVAYLIEAAGIDRLRIT 66
Query: 151 GGDPLILSHKRLQKVLKTLRYI 172
GG+PL+ +L+ + + +
Sbjct: 67 GGEPLVSP--KLEAFMGAVGQM 86
>gi|299531597|ref|ZP_07045002.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
S44]
gi|298720313|gb|EFI61265.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
S44]
Length = 380
Score = 39.1 bits (90), Expect = 0.95, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 16/122 (13%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRR 115
IP +E P G++ R L + + C C +C +
Sbjct: 5 VIPLVDERA-ASRSAIVPSPLQA---PTGLLQDQWGRPLRDLRISVTDRCNFRCNYCMPK 60
Query: 116 EMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
E+ ++LS ++ + ++ TGG+PL+ + ++ ++ L
Sbjct: 61 EVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGEPLLRKN--IEALIAQLA 117
Query: 171 YI 172
+
Sbjct: 118 EL 119
>gi|114049456|ref|YP_740006.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. MR-7]
gi|113890898|gb|ABI44949.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. MR-7]
Length = 327
Score = 39.1 bits (90), Expect = 0.95, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPLIL 157
+ C C +C + K VL ++ LA+I + + + ++ TGG+PL+
Sbjct: 19 VTDRCDFRCVYCMTEDPCFLPKDHVLHLEE----LAWIAQAFTELGVTKIRLTGGEPLVR 74
Query: 158 SH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
S +L +L L +K + + SR+ + L
Sbjct: 75 SDCDQLVHLLGKLPGLKDLSMTTNGSRLSKFAKPMFDAGL 114
>gi|332559255|ref|ZP_08413577.1| pyrroloquinoline quinone biosynthesis protein PqqE [Rhodobacter
sphaeroides WS8N]
gi|332276967|gb|EGJ22282.1| pyrroloquinoline quinone biosynthesis protein PqqE [Rhodobacter
sphaeroides WS8N]
Length = 380
Score = 39.1 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 80/236 (33%), Gaps = 39/236 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L +L H CP+ C +C + LS++D + + + + + F+GG+PL+
Sbjct: 23 VLAELTHRCPLQCPYCS-NPVELEAASRELSTEDWQRVIGELAALGVLQ-IHFSGGEPLV 80
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L L + H ++ I + L EAG
Sbjct: 81 RRD------LVAL--VAHADRAGLYTN-LITSAVMFTRAKVAELAEAGLAHVQV------ 125
Query: 217 YEFSEEAIAAISRL-----------------ANAGIILLSQSVLLKGINDDPEILANLMR 259
+ R+ G+ L +V+ + D+ + ++
Sbjct: 126 -SLQGASAPLAERIGGFRGGHAKKIEAAAWVRAEGMALTLNAVMHRQNLDELPRIVDMAV 184
Query: 260 TFVELRIKPYYL-HHPDLAAGTSHFRLTIE---EGQKIVASLKEKISGLCQPFYIL 311
R++ ++ ++ + T+ E +IV + +++G+ Y++
Sbjct: 185 EMGAQRLEVAHVQYYGWALKNRAALMPTLAQLDEATRIVEEAQARLAGVLAIDYVI 240
>gi|163815376|ref|ZP_02206751.1| hypothetical protein COPEUT_01541 [Coprococcus eutactus ATCC 27759]
gi|158449350|gb|EDP26345.1| hypothetical protein COPEUT_01541 [Coprococcus eutactus ATCC 27759]
Length = 222
Score = 39.1 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 35/96 (36%), Gaps = 6/96 (6%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ + C + C +C + ++D + Y++ ++ V TGG+P
Sbjct: 22 ELAVFIRFAGCNLNCGYCDTKWANEPGVDYQELTED--ELVDYVRRT-EVKNVTLTGGEP 78
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
LI + K+L ++ + + + +
Sbjct: 79 LIQKD--IDKLLLAF-ALEDDIRVEIETNGSVDIAE 111
>gi|152992605|ref|YP_001358326.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1]
gi|151424466|dbj|BAF71969.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1]
Length = 417
Score = 39.1 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 14/127 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C C +C + S E L I+ + E I TG
Sbjct: 135 KSRAFIKIQEGCDFRCSYC-----IIPAVRGNARSHREETILEQIRKLAANGFGEFILTG 189
Query: 152 GDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ + K+LK + I+ V+ +R S P+ +I+ E ++ L E +
Sbjct: 190 TNVGSYGRDHDTSMAKLLKKMSMIRGVRRIRIGSLEPV----QIDDEFMELLSEPWMAKH 245
Query: 209 IAIHANH 215
+ I H
Sbjct: 246 LHIALQH 252
>gi|302870874|ref|YP_003839510.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
obsidiansis OB47]
gi|302573733|gb|ADL41524.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
obsidiansis OB47]
Length = 477
Score = 39.1 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 78/232 (33%), Gaps = 31/232 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C CR+C K L+ + + I+ + G DP
Sbjct: 87 LYISNFCVNNCRYCGYHRSNTKMKRRKLTMDEIRKEVEIIESLGHKRIALELGEDP---K 143
Query: 159 HKRLQKVLKTLRYI-------KHVQILRFHSRVPIVDPQRINPE-----LIQCLKEAGKP 206
++ V+ +++ I +++ + + ++ R+ E + + +P
Sbjct: 144 EAPIEYVVDSIKTIYSVYKEKGNIRRVNVNIAATTIEEYRMLKEAKIGTYVLFQETYHRP 203
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLMRTFVE 263
Y +H P + A+ R AGI L L + ++ +
Sbjct: 204 TYEYMHPEGPKSDYDWHAMAMDRAMQAGIDDVGLGVLFGLYDYKFEVVGLILHAKHLEER 263
Query: 264 LRIKPYYLHHPD--------LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ + P + + ++ +E +KIVA ++ L P
Sbjct: 264 FGVGPHTISVPRIRPAEGVEVTKERYPYIVSDDEFKKIVAIIR-----LAVP 310
>gi|265754282|ref|ZP_06089471.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_33FAA]
gi|263234991|gb|EEZ20546.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_33FAA]
Length = 472
Score = 39.1 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L E + + ++ + I H+ Y +RI++ + C C +C
Sbjct: 49 SHREAALLLECDQPDLIEHIFHLAQEIKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ L+ ++ + +Q+ + G DPL + + + ++T+ IKH
Sbjct: 109 NKTIARKKLTQEEIRKEVIALQDMGHKRLALEAGEDPLRNPIEYILESIRTIYSIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 169 AIRRVNVNIAATAVENYR 186
>gi|264677776|ref|YP_003277682.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
CNB-2]
gi|262208288|gb|ACY32386.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
CNB-2]
Length = 342
Score = 39.1 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 101 LLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ ++LS ++ + ++ TGG+PL
Sbjct: 8 VTDRCNFRCNYCMPKEVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGEPL 66
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + ++ ++ L +
Sbjct: 67 LRKN--IEALIAQLAEL 81
>gi|222151475|ref|YP_002560631.1| hypothetical protein MCCL_1228 [Macrococcus caseolyticus JCSC5402]
gi|222120600|dbj|BAH17935.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 448
Score = 39.1 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + A +Q E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-KEVVRQATQLVQS--GYQEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I + ++ K
Sbjct: 199 TGGYGED---LKDYNLAQLLRDLETIDGLKRIRISS----IEASQLTDEVIDVIDKSNKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|116749020|ref|YP_845707.1| MiaB-like tRNA modifying enzyme YliG [Syntrophobacter fumaroxidans
MPOB]
gi|238066613|sp|A0LIM0|RIMO_SYNFM RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|116698084|gb|ABK17272.1| MiaB-like tRNA modifying enzyme YliG [Syntrophobacter fumaroxidans
MPOB]
Length = 444
Score = 39.1 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 85/247 (34%), Gaps = 37/247 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEVI 148
+K+ C C FC + G + + A + +
Sbjct: 146 RSSAYVKIAEGCGNRCAFCLIPRLRGPY-RSRRAVDILREAHRLVACGAKELNIVAQDTT 204
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207
G D L +L++L I+ ++ +R P RI PELI+ + ++ K V
Sbjct: 205 AFGSD--RGEEHALVSLLESLEEIEKLEWVRL----LYAYPDRITPELIRTMSQSRKVVP 258
Query: 208 YIAIHANH--PYEFSEEAIAAIS--RLANA---GII-LLSQSVLLKGINDDPEILANLMR 259
Y+ I H P + + R+ +A GI + ++ L+ G + E +
Sbjct: 259 YLDIPLQHCVPRILASMGRSGTDPERIVDAIRSGIPGVALRTSLIVGFPGETEADFQALT 318
Query: 260 TFVELRIKPY---YLHHPDLAAGTSHF--RLTIEEGQK---IVASLKEKIS--------G 303
FVE + + P+ + R+ + Q+ ++ L+ IS G
Sbjct: 319 AFVECTGFEHLGVFAFSPEPGTRAARMPDRVPPDVAQERRKVLLELQRGISRRRLESLVG 378
Query: 304 LCQPFYI 310
P +
Sbjct: 379 RVLPVLV 385
>gi|121612497|ref|YP_999886.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. jejuni 81-176]
gi|157414478|ref|YP_001481734.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. jejuni 81116]
gi|167004852|ref|ZP_02270610.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. jejuni 81-176]
gi|218561842|ref|YP_002343621.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|24212020|sp|Q9PIW6|MOAA_CAMJE RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|166217244|sp|A1VXP5|MOAA_CAMJJ RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|172047012|sp|A8FJX0|MOAA_CAMJ8 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|87250305|gb|EAQ73263.1| molybdenum cofactor biosynthesis protein [Campylobacter jejuni
subsp. jejuni 81-176]
gi|112359548|emb|CAL34332.1| putative molybdenum cofactor biosynthesis protein A [Campylobacter
jejuni subsp. jejuni NCTC 11168]
gi|157385442|gb|ABV51757.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. jejuni 81116]
gi|284925454|gb|ADC27806.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. jejuni IA3902]
gi|307747121|gb|ADN90391.1| Molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. jejuni M1]
Length = 320
Score = 39.1 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 101 LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C + K +LS ++ +AA+ I ++ TGG+PL
Sbjct: 17 VTQRCNFRCLYCMPKIPFDYQPKENLLSFEELFLFVKAAID-----EGIEKIRITGGEPL 71
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L +K + K L +
Sbjct: 72 LRKD--LSIFIKMISDYKSDIDLAITTNGF 99
>gi|326771998|ref|ZP_08231283.1| molybdenum cofactor biosynthesis protein A [Actinomyces viscosus
C505]
gi|326638131|gb|EGE39032.1| molybdenum cofactor biosynthesis protein A [Actinomyces viscosus
C505]
Length = 396
Score = 39.1 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 46/118 (38%), Gaps = 10/118 (8%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFR-REM 117
P EL P + + +V RY + L + C + C +C + +
Sbjct: 30 PVLPELPEGPGS----LAPAADGVPQQLVDRYGRTVRDLRLSITDRCNLRCTYCMPAQGL 85
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
+L++ + E+ + + TGG+PL+ L+++++ L ++ +
Sbjct: 86 QWLPTPDLLTTAELTRLGRIAVERLGVERIRLTGGEPLMRRD--LEEIVEALSALRTL 141
>gi|332653319|ref|ZP_08419064.1| radical SAM domain protein [Ruminococcaceae bacterium D16]
gi|332518465|gb|EGJ48068.1| radical SAM domain protein [Ruminococcaceae bacterium D16]
Length = 471
Score = 39.1 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF ++ + + A+ ++ KS EV F GG+PL
Sbjct: 101 LHVSHDCNLRCKYCFASTGDFGTGRKIMDFETAKRAIDWVVAKSGKRRNIEVDFFGGEPL 160
Query: 156 ILSHKRLQKVLKTLRYI--KHVQILR--FHSRVPIVDPQRI 192
++ ++K ++ R + +H ++ R + +++ + I
Sbjct: 161 -MAMDTVKKTVEYARSLEKEHDKVFRFTITTNGVLLNDENI 200
>gi|282163554|ref|YP_003355939.1| hypothetical protein MCP_0884 [Methanocella paludicola SANAE]
gi|282155868|dbj|BAI60956.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 366
Score = 39.1 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 39/231 (16%), Positives = 73/231 (31%), Gaps = 29/231 (12%)
Query: 89 IVHRYP-DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWE 146
+V +YP ++I L C ++CR C+ K T S + ++ +
Sbjct: 5 VVEKYPLNQIYFYLTEGCNLHCRHCWIAPKYQDSKHTYPSLPFNLFQSIIKQARPLGLAA 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V TGG+PL+ + L +++ L + P++ + + E P
Sbjct: 65 VKLTGGEPLMHPDIN---NILELIKQENLG-LGIETNGVFC-----TPDVSRRIAECNAP 115
Query: 207 VY--------IAIH--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
H + I+ I L G+ +++ E +
Sbjct: 116 FVSVSLDGVNADTHEWVRGVKGCFNDTISGIKNLVETGVSPQIIMTVMRHNKGQMEEMIR 175
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFR-----LTIEEGQKIVASLKEKIS 302
L T + A H L+IEE I ++ +S
Sbjct: 176 LAETL---GASSVKFNIVQPTARGKHLHNSGETLSIEELIHIGEWVENILS 223
>gi|262039584|ref|ZP_06012879.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Leptotrichia goodfellowii F0264]
gi|261746393|gb|EEY33937.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Leptotrichia goodfellowii F0264]
Length = 182
Score = 39.1 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
C C C + G ++S + + I E S + + +GGDPL
Sbjct: 30 YSLYFAGCIHKCPGCHNEKSWNPDNGELVSYEMLQEIADEINENSILDGITISGGDPLFN 89
Query: 158 SHKRLQKVLKTLRY 171
L KVLK L+
Sbjct: 90 PVDML-KVLKFLKE 102
>gi|238924259|ref|YP_002937775.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale ATCC 33656]
gi|238875934|gb|ACR75641.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale ATCC 33656]
Length = 434
Score = 39.1 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 46/115 (40%), Gaps = 18/115 (15%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149
+ R +K+ C +C +C + + S+ E +A ++ + EV+
Sbjct: 140 KEHTRAFIKVQDGCNQFCSYC-----IIPYARGRVRSRRFENVIAEVERLAANGFKEVVL 194
Query: 150 TGGDPLILS--------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
TG + LS L ++++ + +K ++ +R S P + + EL
Sbjct: 195 TG---IHLSSYGVDFEEAVGLLELIQAVNAVKGIERIRLGSLEPKIVTEHFASEL 246
>gi|237709650|ref|ZP_04540131.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 9_1_42FAA]
gi|229456286|gb|EEO62007.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 9_1_42FAA]
Length = 472
Score = 39.1 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L E + + + + I H+ Y +RI++ + C C +C
Sbjct: 49 SHREAALLLECDQPDLIERIFHLAQEIKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ L+ ++ + +Q+ + G DPL + + + ++T+ IKH
Sbjct: 109 NKTIARKKLTQEEIRKEVIALQDMGHKRLALEAGEDPLRNPIEYILESIRTIYSIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 169 AIRRVNVNIAATTVENYR 186
>gi|291087073|ref|ZP_06345323.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
gi|291076389|gb|EFE13753.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
Length = 452
Score = 39.1 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 30/141 (21%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C G + S +D + + E++ TG
Sbjct: 151 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSR--SMEDVVQEVEALAASGY-KEIVLTG-- 205
Query: 154 PLILS---------------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ LS L ++ L I ++ +R S ++P+ I E +
Sbjct: 206 -IHLSSYGADFKRTAENPEAAADLLSLIVRLDRIPGIERIRLGS----LEPRIITDEFAE 260
Query: 199 CLK-----EAGKPVYIAIHAN 214
L + + N
Sbjct: 261 TLAGLKSFCPHFHLSLQSGCN 281
>gi|25028494|ref|NP_738548.1| putative coenzyme PQQ synthesis protein [Corynebacterium efficiens
YS-314]
gi|259507551|ref|ZP_05750451.1| coenzyme PQQ synthesis protein [Corynebacterium efficiens YS-314]
gi|23493779|dbj|BAC18748.1| putative coenzyme PQQ synthesis protein [Corynebacterium efficiens
YS-314]
gi|259164871|gb|EEW49425.1| coenzyme PQQ synthesis protein [Corynebacterium efficiens YS-314]
Length = 400
Score = 39.1 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 19/195 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGG 152
P + ++ C + CR C R + LS+++ A L + V+ TGG
Sbjct: 18 PFIAIWEVTRACQLVCRHC-RADAQHEPAPGQLSTEEGFALLDSLATYDHPRPLVVLTGG 76
Query: 153 DPLILSH-KRLQKVLKTL-RYI---KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
DP L + L I V R + + L L
Sbjct: 77 DPFERGDLTELTRYGTGLGLNISLSPSV-TPRLTRARLVELREAGGSALSLSLDG----A 131
Query: 208 YIAIHANHPYEFSEEAIAAISRLA---NAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
H +H F+ + + G L S L G + L+ +++
Sbjct: 132 VAETH-DHFRGFAGTFKQTVEMARVVTDFGYRLQINSTLTAG---NVHQAPALLARVIDM 187
Query: 265 RIKPYYLHHPDLAAG 279
+ + +
Sbjct: 188 GARLWSVFFLVPTGR 202
>gi|239939475|ref|ZP_04691412.1| molybdenum cofactor biosynthesis protein A [Streptomyces
roseosporus NRRL 15998]
gi|239985964|ref|ZP_04706628.1| molybdenum cofactor biosynthesis protein A [Streptomyces
roseosporus NRRL 11379]
gi|291442905|ref|ZP_06582295.1| molybdenum cofactor biosynthesis protein A [Streptomyces
roseosporus NRRL 15998]
gi|291345852|gb|EFE72756.1| molybdenum cofactor biosynthesis protein A [Streptomyces
roseosporus NRRL 15998]
Length = 339
Score = 39.1 bits (90), Expect = 0.99, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + + +L+ + + + I EV TGG+PL+
Sbjct: 29 LTDRCNLRCTYCMPAEGLDWLPRPELLTDDEVVRLVDVATRRLGITEVRLTGGEPLLR-- 86
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYE 218
+ L ++ L + L + + L++AG V +++ P
Sbjct: 87 RGLPGLVARLHALPDPPELSLTTNGIGLARS------AAALRDAGLSRVNVSLDTLRPER 140
Query: 219 FS--------EEAIAAISRLANAG-IILLSQSVLLKGINDD 250
F+ + +A + AG + +V ++G+NDD
Sbjct: 141 FTAITRRDRLPDVLAGLRAARTAGLAPVKINTVPVRGVNDD 181
>gi|225181444|ref|ZP_03734887.1| molybdenum cofactor biosynthesis protein A [Dethiobacter
alkaliphilus AHT 1]
gi|225167842|gb|EEG76650.1| molybdenum cofactor biosynthesis protein A [Dethiobacter
alkaliphilus AHT 1]
Length = 328
Score = 39.1 bits (90), Expect = 0.99, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 22/218 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
++ C + C +C E + LS + A+ K+ I +V TGG+PL+
Sbjct: 19 VVDSCNLRCFYCSPGESCKPRSLRGQLSREHIVRAVT-AAAKAGIKKVRLTGGEPLVRRD 77
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYE 218
+ ++ + I+ ++ L + + P LK + + H + +
Sbjct: 78 --IVGLVHDIAQIEGIEDLSLTTNG-TLLKDLAEPLAAAGLKRVNISLDSLDGH--NFEQ 132
Query: 219 FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKP-YYL 271
+ + + I +AG+ + V++K +N + ++ ++ Y+
Sbjct: 133 ITCGGQLQATLDGIDAAFDAGLTPVKINMVVMKDLNHHEVENFAKLTLDRDIHVRFIEYM 192
Query: 272 HHP--DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
D + + +I+ + P
Sbjct: 193 PMLGQDDVWRRHYLPSS-----EIMELCNGVLPMEAVP 225
>gi|31794288|ref|NP_856781.1| molybdenum cofactor biosynthesis protein A [Mycobacterium bovis
AF2122/97]
gi|59798458|sp|Q7TX84|MOAA1_MYCBO RecName: Full=Molybdenum cofactor biosynthesis protein A 1
gi|31619883|emb|CAD96823.1| PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A MOAA1
[Mycobacterium bovis AF2122/97]
Length = 359
Score = 39.1 bits (90), Expect = 0.99, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
++ C + CR+C E + +LS K+ A + + +V TGG+PLI
Sbjct: 33 VIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIRPD 91
Query: 160 KRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRIN 193
L ++++TL ++ L + ++ R++
Sbjct: 92 --LPEIVRTLSAKVGEDSGLRDLAITTNG-VLLADRVD 126
>gi|57117055|ref|YP_177925.1| molybdenum cofactor biosynthesis protein A [Mycobacterium
tuberculosis H37Rv]
gi|121638994|ref|YP_979218.1| putative molybdenum cofactor biosynthesis protein A moaA1
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148662963|ref|YP_001284486.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis H37Ra]
gi|148824301|ref|YP_001289055.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis F11]
gi|224991486|ref|YP_002646175.1| putative molybdenum cofactor biosynthesis protein A [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253797790|ref|YP_003030791.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis KZN 1435]
gi|254365737|ref|ZP_04981782.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis str. Haarlem]
gi|260202251|ref|ZP_05769742.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis T46]
gi|260206444|ref|ZP_05773935.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis K85]
gi|289444673|ref|ZP_06434417.1| molybdenum cofactor biosynthesis protein A [Mycobacterium
tuberculosis T46]
gi|289553099|ref|ZP_06442309.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis KZN 605]
gi|289571317|ref|ZP_06451544.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T17]
gi|289575821|ref|ZP_06456048.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis K85]
gi|289746919|ref|ZP_06506297.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis 02_1987]
gi|289751785|ref|ZP_06511163.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T92]
gi|289755228|ref|ZP_06514606.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis EAS054]
gi|289759236|ref|ZP_06518614.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T85]
gi|289763289|ref|ZP_06522667.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis GM 1503]
gi|297635744|ref|ZP_06953524.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis KZN 4207]
gi|297732742|ref|ZP_06961860.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis KZN R506]
gi|306804898|ref|ZP_07441566.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu008]
gi|306809089|ref|ZP_07445757.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu007]
gi|313660075|ref|ZP_07816955.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis KZN V2475]
gi|3024133|sp|O05786|MOAA1_MYCTU RecName: Full=Molybdenum cofactor biosynthesis protein A 1
gi|38490320|emb|CAE55548.1| PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A MOAA1
[Mycobacterium tuberculosis H37Rv]
gi|121494642|emb|CAL73123.1| Probable molybdenum cofactor biosynthesis protein A moaA1
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|134151250|gb|EBA43295.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis str. Haarlem]
gi|148507115|gb|ABQ74924.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis H37Ra]
gi|148722828|gb|ABR07453.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis F11]
gi|224774601|dbj|BAH27407.1| putative molybdenum cofactor biosynthesis protein A [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253319293|gb|ACT23896.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis KZN 1435]
gi|289417592|gb|EFD14832.1| molybdenum cofactor biosynthesis protein A [Mycobacterium
tuberculosis T46]
gi|289437731|gb|EFD20224.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis KZN 605]
gi|289540252|gb|EFD44830.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis K85]
gi|289545071|gb|EFD48719.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T17]
gi|289687447|gb|EFD54935.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis 02_1987]
gi|289692372|gb|EFD59801.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T92]
gi|289695815|gb|EFD63244.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis EAS054]
gi|289710795|gb|EFD74811.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis GM 1503]
gi|289714800|gb|EFD78812.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T85]
gi|308344666|gb|EFP33517.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu007]
gi|308348616|gb|EFP37467.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu008]
gi|323718340|gb|EGB27518.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis CDC1551A]
gi|326902668|gb|EGE49601.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis W-148]
gi|328457569|gb|AEB02992.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis KZN 4207]
Length = 359
Score = 39.1 bits (90), Expect = 0.99, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
++ C + CR+C E + +LS K+ A + + +V TGG+PLI
Sbjct: 33 VIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIRPD 91
Query: 160 KRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRIN 193
L ++++TL ++ L + ++ R++
Sbjct: 92 --LPEIVRTLSAKVGEDSGLRDLAITTNG-VLLADRVD 126
>gi|139438236|ref|ZP_01771789.1| Hypothetical protein COLAER_00778 [Collinsella aerofaciens ATCC
25986]
gi|133776433|gb|EBA40253.1| Hypothetical protein COLAER_00778 [Collinsella aerofaciens ATCC
25986]
Length = 319
Score = 39.1 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 27/150 (18%)
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+LS+++ + + I V TGG+PL+ +R+ +++ +R I ++ +
Sbjct: 11 HDELLSAEEIARFVRLVAG-EGIRRVRLTGGEPLV--SRRIIPLIRDIRAIPQIEDISLT 67
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN-----AGI- 235
+ ++ P+L LK+AG I+RL AGI
Sbjct: 68 TNGALL------PKLAPQLKDAGLNRVNI----SLDTLDPTLFGKITRLGRLEQTMAGID 117
Query: 236 --------ILLSQSVLLKGINDDPEILANL 257
+ V+++ +N D LA L
Sbjct: 118 AALAWGFEPVKVNCVVVRRLNQDVAALARL 147
>gi|40062747|gb|AAR37641.1| molybdenum cofactor biosynthesis protein A [uncultured marine
bacterium 439]
Length = 331
Score = 39.1 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 20/161 (12%)
Query: 101 LLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C C +C + + VLS ++ + E + +V TGG+PL+
Sbjct: 19 VTDHCNYRCHYCRDEDHQTHTTRSEVLSFEEIVKIVGLFAE-LGVTKVRLTGGEPLLRKD 77
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA---GKPVYIAIHA-NH 215
+ + + L I + + + + P L LK + I
Sbjct: 78 --ILDLTRMLGDIPGLTDIPLSTNA------HLLPSLAGKLKSHGINRANISIDSLIPER 129
Query: 216 PYEFSEE-----AIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + + I I AG+ + V++KG+ND+
Sbjct: 130 FKEITRDGDLARVIKGIDAAIAAGMSPIKLNMVVMKGVNDE 170
>gi|228949292|ref|ZP_04111556.1| antilisterial bacteriocin (subtilosin) production [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228810418|gb|EEM56775.1| antilisterial bacteriocin (subtilosin) production [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
Length = 462
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP +++ + C V CR C+ G+ K V+S ++ L + + + TGG
Sbjct: 122 YPKVASIEITNRCNVRCRHCY--GDFGAVKPKVMSIDQIKSLLDDL-NHIGVKLIELTGG 178
Query: 153 D 153
D
Sbjct: 179 D 179
>gi|20807443|ref|NP_622614.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
MB4]
gi|20515967|gb|AAM24218.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
MB4]
Length = 437
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 13/113 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C YC +C G + + Y + E++ TG
Sbjct: 142 RTRAYIKIEDGCNQYCTYCIIPYARGPVRSRKP-ENIIKEVKKY--AEHGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
D L + L V+K + ++ ++ +R S P + + EL
Sbjct: 199 IASYGRD---LKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTEDVVKELANL 248
>gi|260188145|ref|ZP_05765619.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis CPHL_A]
gi|289448788|ref|ZP_06438532.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis CPHL_A]
gi|289421746|gb|EFD18947.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis CPHL_A]
Length = 359
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
++ C + CR+C E + +LS K+ A + + +V TGG+PLI
Sbjct: 33 VIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIRPD 91
Query: 160 KRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRIN 193
L ++++TL ++ L + ++ R++
Sbjct: 92 --LPEIVRTLSAKVGEDSGLRDLAITTNG-VLLADRVD 126
>gi|94496981|ref|ZP_01303555.1| probable molybdenum cofactor biosynthesis protein [Sphingomonas sp.
SKA58]
gi|94423657|gb|EAT08684.1| probable molybdenum cofactor biosynthesis protein [Sphingomonas sp.
SKA58]
Length = 326
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C M + VLS ++ A LA + I ++ TGG+PL+
Sbjct: 16 VTDRCDLRCRYCMAERMHFLPRDQVLSLEEI-ALLADLFIARGITKIRLTGGEPLVRRD- 73
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+ ++++ + H+ + R++ + V +++ + P F+
Sbjct: 74 -IGELVRRIGR--HLGS-GLDELTLTTNATRLDSHAQDLFDAGVRRVNVSLDSRDPARFA 129
Query: 221 EEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
+ A + AG+ + V LKGINDD
Sbjct: 130 DVTRGGDIGRVFAGLDAARAAGLAVKINMVALKGINDD 167
>gi|312898876|ref|ZP_07758264.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
gi|310620038|gb|EFQ03610.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
Length = 481
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 78/219 (35%), Gaps = 22/219 (10%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS------KDTEAALAYIQEK 141
+ H D L + C +C +C F +VG++K L +D + +
Sbjct: 150 VQHETRDAALYVGIPYCASHCLYCSFPSRLVGNEKAERLLDFTNKLIEDIQDVQRLCSDT 209
Query: 142 S-QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+I + GG P LS + +++++ L+ + R + V P + E + L
Sbjct: 210 GIRIDSIYVGGGTPTSLSVEAVERIMSALQPLA--GACREWT-VEAGRPDTMTEEKARIL 266
Query: 201 KEAG-KPVYIAIHANHPYEFSE--------EAIAAISRLANAGIILLSQSVLLKGI-NDD 250
+ G + I + + +AG +++ + + G+
Sbjct: 267 RAYGVDRISINPQTMQQHLLDALGRRHTVRDIYRMFDYCRDAGFSVIN-TDFIAGLPGQT 325
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
E + + +L + +H L G FR T+ E
Sbjct: 326 VEDMRQNLEAVCQLAPENVTIHTLALKKGAPLFRHTLRE 364
>gi|260072600|gb|ACX30499.1| molybdenum cofactor biosynthesis protein A [uncultured SUP05
cluster bacterium]
gi|269467972|gb|EEZ79700.1| molybdenum cofactor biosynthesis protein A [uncultured SUP05
cluster bacterium]
Length = 331
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 63/157 (40%), Gaps = 12/157 (7%)
Query: 101 LLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C C +C E ++ +LS +D + + E I +V TGG+PL+
Sbjct: 19 ITEHCNYRCFYCRDDEHTPNCKREDILSYEDIQRIVRLFAE-LGISKVRLTGGEPLLR-- 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
+ + K+ + + I ++ + + ++ P+L + ++ N E
Sbjct: 76 RGIVKIARLISSIDGIKDVPLSTN--AHLLEKFAPKLHENGINRVNISIDSLMPNRFKEI 133
Query: 220 S-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ E I I +G+ + V+++G ND+
Sbjct: 134 TRGGDVNEVIKGIDAAIASGMHPIKINMVVMRGNNDN 170
>gi|259503225|ref|ZP_05746127.1| molybdenum cofactor biosynthesis protein A [Lactobacillus antri DSM
16041]
gi|259168817|gb|EEW53312.1| molybdenum cofactor biosynthesis protein A [Lactobacillus antri DSM
16041]
Length = 302
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ ++S + + + +V TGG+PL+ L ++ +R I + +
Sbjct: 10 SQDKIMSQDEIVRLVQNFAR-LGVTKVRLTGGEPLLRRD--LATIIYRIRQIPEITDISA 66
Query: 181 HSRVPIV------DPQRINPELIQCLKEAGKPVY 208
+ + + L L VY
Sbjct: 67 TTNGTALKYQAKDLKEAGLDRLNISLDTFDPEVY 100
>gi|160892570|ref|ZP_02073360.1| hypothetical protein CLOL250_00099 [Clostridium sp. L2-50]
gi|156865611|gb|EDO59042.1| hypothetical protein CLOL250_00099 [Clostridium sp. L2-50]
Length = 438
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 45/142 (31%), Gaps = 17/142 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVI 148
LK+ C C +C + G + + A+ + + E
Sbjct: 141 SMAYLKIAEGCGKMCTYCAIPYIRGKY--RSIPMEQLLASAKELAAQGVKELILVAQETT 198
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-V 207
G D + K L K+L L I+ +Q +R P+ I ELI + E K
Sbjct: 199 LYGVD--LYGEKTLPKLLHELCKIEEIQWIRL----MYCYPEEITDELIDTIAEEEKVCH 252
Query: 208 YIAIHANHPYEFSEEAIAAISR 229
Y+ I H R
Sbjct: 253 YLDIPIQHSE--DPVLRRMGRR 272
>gi|149907724|ref|ZP_01896471.1| radical SAM domain protein [Moritella sp. PE36]
gi|149809394|gb|EDM69323.1| radical SAM domain protein [Moritella sp. PE36]
Length = 295
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++L++ + C C FC + + L+ + + V GD +
Sbjct: 19 LILQVANGCSWNNCTFCDMYTQPQKKFRAKKIADIEAEILSVVASGQKHQRVFLADGDAM 78
Query: 156 ILSHKRLQKVLKTLRY-IKHVQIL 178
L KRL+++L +R + HVQ +
Sbjct: 79 TLPFKRLKEILLLIRKHMPHVQRV 102
>gi|298526582|ref|ZP_07013991.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis 94_M4241A]
gi|298496376|gb|EFI31670.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis 94_M4241A]
Length = 359
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
++ C + CR+C E + +LS K+ A + + +V TGG+PLI
Sbjct: 33 VIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIRPD 91
Query: 160 KRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRIN 193
L ++++TL ++ L + ++ R++
Sbjct: 92 --LPEIVRTLSAKVGEDSGLRDLAITTNG-VLLADRVD 126
>gi|257095940|ref|YP_003169581.1| nitrogenase cofactor biosynthesis protein NifB [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257048464|gb|ACV37652.1| nitrogenase cofactor biosynthesis protein NifB [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 505
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 58/207 (28%), Gaps = 39/207 (18%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQ 121
P ED H Y R+ + + C + C +C R+ G
Sbjct: 40 QDHPCYSED-------------AHHYFARMHVAVAPACNIQCHYCNRKYDCANESRPGVV 86
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + LA Q+ + G GDPL + + + +++
Sbjct: 87 SEVLTPDQAVRKTLAVAATIPQMSVLGIAGPGDPLANPERTFETFRQLALKAPDIKLC-V 145
Query: 181 HSRVPI------------VDPQRINPELIQ-CLKEAGKPVYI-----AIHANHPYEFSEE 222
+ + +D I + + P +
Sbjct: 146 ATNGLVLPDYVEELARYNIDHVTITINCVDPAIGARIYPWIFWKNRRVFGHEAAAILIAQ 205
Query: 223 AIAAISRLANAGIILLSQSVLLKGIND 249
+ L GI++ SVL+ G+ND
Sbjct: 206 QQKGLEMLTARGILVKVNSVLIPGVND 232
>gi|121607765|ref|YP_995572.1| molybdenum cofactor biosynthesis protein A [Verminephrobacter
eiseniae EF01-2]
gi|121552405|gb|ABM56554.1| GTP cyclohydrolase subunit MoaA [Verminephrobacter eiseniae EF01-2]
Length = 384
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 12/97 (12%)
Query: 85 PLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRRE-----MVGSQKGTVLSSKDTEAAL 135
P G++ R L + + C C +C +E G +L ++
Sbjct: 26 PPTGLLADTRGRPLRDLRISVTDRCNFRCNYCMPKEVFDKNYPYLPHGALLRFEEIARLA 85
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ ++ TGG+PL+ + L ++ L +
Sbjct: 86 RLFLAH-GVRKIRLTGGEPLLRKN--LPALVAQLAAL 119
>gi|260891523|ref|ZP_05902786.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Leptotrichia hofstadii F0254]
gi|260858906|gb|EEX73406.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Leptotrichia hofstadii F0254]
Length = 126
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
C C C + G +L+ + E I E + + + +GGDPL
Sbjct: 37 YSLYFAGCSHSCPGCHNEYSWNPKHGNLLTYEKLEEIAKEINENTLLDGITISGGDPLFN 96
Query: 158 SHKRLQKVLKTLRY 171
L KVLK L+
Sbjct: 97 PVDML-KVLKFLKE 109
>gi|212690607|ref|ZP_03298735.1| hypothetical protein BACDOR_00093 [Bacteroides dorei DSM 17855]
gi|212666853|gb|EEB27425.1| hypothetical protein BACDOR_00093 [Bacteroides dorei DSM 17855]
Length = 472
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L E + + + + I H+ Y +RI++ + C C +C
Sbjct: 49 SHREAALLLECDQPDLIERIFHLAQEIKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ L+ ++ + +Q+ + G DPL + + + ++T+ IKH
Sbjct: 109 NKTIARKKLTQEEIRKEVIALQDMGHKRLALEAGEDPLRNPIEYILESIRTIYSIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 169 AIRRVNVNIAATTVENYR 186
>gi|212695406|ref|ZP_03303534.1| hypothetical protein BACDOR_04955 [Bacteroides dorei DSM 17855]
gi|212662041|gb|EEB22615.1| hypothetical protein BACDOR_04955 [Bacteroides dorei DSM 17855]
Length = 348
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGD 153
++ + C ++CR C + + +D L + ++ + VI TGG+
Sbjct: 21 QLFWECTLRCNLHCRHCGSDCKKIA-GHPDMPKEDFLRVLDSVSAQNDPHKIFVIITGGE 79
Query: 154 PLILSHKRLQKVLKTLRY 171
PL+ L++ + +
Sbjct: 80 PLMRKD--LEECGRAIYE 95
>gi|15842680|ref|NP_337717.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis CDC1551]
gi|254233733|ref|ZP_04927058.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis C]
gi|13882999|gb|AAK47531.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis CDC1551]
gi|124599262|gb|EAY58366.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis C]
Length = 368
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
++ C + CR+C E + +LS K+ A + + +V TGG+PLI
Sbjct: 42 VIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIRPD 100
Query: 160 KRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRIN 193
L ++++TL ++ L + ++ R++
Sbjct: 101 --LPEIVRTLSAKVGEDSGLRDLAITTNG-VLLADRVD 135
>gi|220932034|ref|YP_002508942.1| MiaB-like tRNA modifying enzyme [Halothermothrix orenii H 168]
gi|219993344|gb|ACL69947.1| MiaB-like tRNA modifying enzyme [Halothermothrix orenii H 168]
Length = 442
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 16/116 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDP 154
+K+ C C +C L+S+ E + + + I E+I D
Sbjct: 146 AYVKIAEGCDNRCTYCS-----IPYIRGKLTSRPIEDIYNEVVKLGQQGIKEIILVAQDT 200
Query: 155 L-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
I L +LK L I ++ +R P+RI EL+ + E K
Sbjct: 201 TQYGKDIYGKSMLLPLLKELVEIDSIKWIRL----LYCYPERITDELLFFIAENNK 252
>gi|296136124|ref|YP_003643366.1| molybdenum cofactor biosynthesis protein A [Thiomonas intermedia
K12]
gi|295796246|gb|ADG31036.1| molybdenum cofactor biosynthesis protein A [Thiomonas intermedia
K12]
Length = 378
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 12/89 (13%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIW 145
HR + + + C C +C +E+ +LS ++ A +
Sbjct: 36 HRPLHDLRISVTDRCNFRCTYCMPKEIFDKHYEFLSHADLLSFEEITRAAQVFMA-LGVR 94
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
++ TGG+PL L+K L+ L + H
Sbjct: 95 KIRLTGGEPL------LRKNLERLVEMLH 117
>gi|218283069|ref|ZP_03489164.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989]
gi|218216138|gb|EEC89676.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989]
Length = 464
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 78/228 (34%), Gaps = 34/228 (14%)
Query: 80 DNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
++ + P+ G + ++ L + H C + C +CF + ++S + + AL
Sbjct: 78 EDTYEPMAGQLKAKTSGVIKALCLHIAHTCNLNCSYCFASQGKYHGDRALMSFETGKRAL 137
Query: 136 AYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQ 190
++ E S EV F GG+PL ++ +++++ R I + + RF +
Sbjct: 138 DFLVENSGTRRNLEVDFFGGEPL-MNFDVVKQLVAYARSIEKEAGKNFRFT---LTTNGM 193
Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
I+ ++I+ + V + + E + S
Sbjct: 194 LIDDDVIEFANKEMSNVVL--SLDGRKEVHDRYRVDYSG------------------KGS 233
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI-VASL 297
+ + + V+ R Y F +++ + L
Sbjct: 234 FDTIVPKFQKLVKAREGKNYYMRGTFTHANPDFLKDVQQMLDLGFREL 281
>gi|163784150|ref|ZP_02179090.1| molybdenum cofactor synthesis-like protein [Hydrogenivirga sp.
128-5-R1-1]
gi|159880581|gb|EDP74145.1| molybdenum cofactor synthesis-like protein [Hydrogenivirga sp.
128-5-R1-1]
Length = 342
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 36/241 (14%), Positives = 84/241 (34%), Gaps = 36/241 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C + +L +D + + K + V TGG+PL+
Sbjct: 31 VTDRCNLKCFYCRPENQEFIPRQEILDYEDMVKLVKVL-TKFGLKSVRITGGEPLLRQD- 88
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY--- 217
++K + L ++ + + + + + LKEAG + I +
Sbjct: 89 -IEKFVAMLNEVEGIDDISMTTNAITLKKH------AKALKEAGLR-RLNISIDSLKPEL 140
Query: 218 --EFSE----EAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
E ++ + I I GI + +V++KG+N++ + E ++ +
Sbjct: 141 FYEITKGNLQDVIDGIVEAKKLGIEPIKINAVIIKGLNENEALDFVEFGK--EYGVEVRF 198
Query: 271 LHHPD----LAAGTSHFRLTIEEGQKIVASLKEKI-------SGLCQPFYILDLPGGYGK 319
+ +E+ + ++ ++ SG + ++P K
Sbjct: 199 IEMMPIGQGQIKWDEDMVQPLEKVKNMIEEKYGELVPSSSIGSGAA---RVYEIPSINTK 255
Query: 320 V 320
V
Sbjct: 256 V 256
>gi|284162386|ref|YP_003401009.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Archaeoglobus profundus DSM 5631]
gi|284012383|gb|ADB58336.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Archaeoglobus profundus DSM 5631]
Length = 234
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
CP C +C + E I+E I V TGG+PL+ + L
Sbjct: 26 GCPFRCPYCQNYRLFEGGVEVTP-----EEIAKKIRENYLIEGVCLTGGEPLVQNLDELT 80
Query: 164 KVLKTLRY 171
K+++ L+
Sbjct: 81 KLIELLKE 88
>gi|167950322|ref|ZP_02537396.1| hypothetical protein Epers_29333 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 344
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 36/116 (31%), Gaps = 15/116 (12%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E LN ER + + P G R+ L CP CR C
Sbjct: 174 EMLNEADRER---LALLDGLPDPGGETRFAKLGL-IPAMGCPQTCRHCMFIWRP------ 223
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ E Y V+FTGGD + L +R ++H++
Sbjct: 224 -PVKQQLEPQSLYQLVDGLTESVLFTGGDL----TRHLDHFYAAIRSMRHIRQFAI 274
>gi|167855769|ref|ZP_02478523.1| molybdenum cofactor biosynthesis protein A [Haemophilus parasuis
29755]
gi|219870678|ref|YP_002475053.1| molybdenum cofactor biosynthesis protein A [Haemophilus parasuis
SH0165]
gi|167853109|gb|EDS24369.1| molybdenum cofactor biosynthesis protein A [Haemophilus parasuis
29755]
gi|219690882|gb|ACL32105.1| molybdenum cofactor biosynthesis protein A [Haemophilus parasuis
SH0165]
Length = 339
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 83/264 (31%), Gaps = 27/264 (10%)
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAY 137
+ + + +Y L VC C +C S + +
Sbjct: 10 NEFEQALIDRFQRQYTYLRLSI-TDVCNFRCNYCLPEGYRPPSHKQTFLSVDEIQRVAQA 68
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
++ TGG+P L L+ + L ++ + + R+ ++
Sbjct: 69 F-ANLGTEKIRITGGEP-TLRKDFLE-IAHRLSQTAGIRQIALTTNG-----YRMERDVE 120
Query: 198 QCLKEAGKPVYIAIHANHPYEFS--------EEAIAAISRLANAGI-ILLSQSVLLKGIN 248
+ + +++ + P +F + I R G + +VL+K
Sbjct: 121 LWQQAGITHLNVSVDSLEPRQFHLITGENKLATVLNGIERAFEIGYKKVKVNAVLMKQYT 180
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQP 307
L + +R + I+ ++ + + F+ GQ I+ L ++ G QP
Sbjct: 181 AKG--LDDFLRWIKDRPIQMRFIELMETSEMDHFFQQQHLSGQSILEQLTQE--GWQLQP 236
Query: 308 FYILDLPGGYGKVKIDTHNIKKVG 331
+ G KV ++G
Sbjct: 237 K---AMSDGPAKVLAHPDYQGEIG 257
>gi|21674155|ref|NP_662220.1| molybdenum cofactor biosynthesis protein A [Chlorobium tepidum TLS]
gi|24211970|sp|P59038|MOAA_CHLTE RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|21647315|gb|AAM72562.1| molybdenum cofactor biosynthesis protein A [Chlorobium tepidum TLS]
Length = 330
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 86/245 (35%), Gaps = 27/245 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
D + + + C + C +C + + + + +T +A + + ++ FTGG+P
Sbjct: 20 DYVRIAVTSACNLRCTYCLKEDAPTQTQQLDVV--ETSKLIALLAGM-GVRKIRFTGGEP 76
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC------LKEAGKPVY 208
L+ + ++++ + + + + V R L++ L
Sbjct: 77 LLHP--SIPELVRIAKATPGIDTVCITTNG--VLLDRQLDALVEAGLDGVNLSLDTLDRE 132
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD-PEILANLMRTFVELRIK 267
F + + A LA + + +++L+GIN+D L R +L ++
Sbjct: 133 KFTSITRRDRFEQVSKALDRLLATPSLTVKLNTLMLRGINNDEIPAFVELTRE-HDLTVR 191
Query: 268 PYYLHHPDLAA--------GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
L D G R + + + ++ +G Y LPG G
Sbjct: 192 FMELQPFDDHQIWRTGRFMGAERIRERLADAYPELEAI----TGHSTEHYSFSLPGHRGS 247
Query: 320 VKIDT 324
+ I
Sbjct: 248 IAIIP 252
>gi|311029133|ref|ZP_07707223.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus sp. m3-13]
Length = 374
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 31/205 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L I ++ + TGG+P +
Sbjct: 33 VEFTTTTLCNMRCEHCAVGYTLQPKDPKALPIELLIQRLEEI---PRLRSISITGGEP-M 88
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
+S K + + + L H + +R +IN L L K P +H +
Sbjct: 89 MSMKSVNEYVVPLLKYAHERGVR----------TQINSNLTLDLARYEKIIPYLDVLHIS 138
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H + + G ++ + E + + +
Sbjct: 139 HNW-------GTMDDFVEGGFAMMDRKPTYDQRAKYFERMIENSKALTAAGVIVSAETML 191
Query: 275 --DLAAGTSHFRLTIEEGQKIVASL 297
H ++IV +
Sbjct: 192 NKRTLPHIEHIH------KQIVEEM 210
>gi|308176262|ref|YP_003915668.1| molybdenum cofactor biosynthesis protein A [Arthrobacter
arilaitensis Re117]
gi|307743725|emb|CBT74697.1| molybdenum cofactor biosynthesis protein A [Arthrobacter
arilaitensis Re117]
Length = 346
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 63/170 (37%), Gaps = 29/170 (17%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ G + +LS ++ E I + ++ TGG+PL
Sbjct: 24 VTDRCNFRCVYCMPKEIFGRDFQFRERSELLSFEEIERLAR-ISVSLGVTKLRLTGGEPL 82
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRF-------HSRVPIVDPQ-------RINPELIQCLK 201
+ + + ++ L ++ + R S +P++ P R+ L
Sbjct: 83 LR--RGIVDLVAMLSNLRTPEGKRIDLAMTTNGSALPVLAPALKEAGLNRVTISLDSL-- 138
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ N P + + AI G+ + +V+ +G+ND
Sbjct: 139 -DDEKFKAINDVNFPVS---KVLEAIQVAREVGLGPVKINTVIKRGVNDS 184
>gi|237725196|ref|ZP_04555677.1| thiamine biosynthesis protein ThiH [Bacteroides sp. D4]
gi|229436462|gb|EEO46539.1| thiamine biosynthesis protein ThiH [Bacteroides dorei 5_1_36/D4]
Length = 472
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L E + + + + I H+ Y +RI++ + C C +C
Sbjct: 49 SHREAALLLECDQPDLIERIFHLAQEIKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ L+ ++ + +Q+ + G DPL + + + ++T+ IKH
Sbjct: 109 NKTIARKKLTQEEIRKEVIALQDMGHKRLALEAGEDPLRNPIEYILESIRTIYSIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 169 AIRRVNVNIAATTVENYR 186
>gi|291286971|ref|YP_003503787.1| nitrogenase cofactor biosynthesis protein NifB [Denitrovibrio
acetiphilus DSM 12809]
gi|290884131|gb|ADD67831.1| nitrogenase cofactor biosynthesis protein NifB [Denitrovibrio
acetiphilus DSM 12809]
Length = 446
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 67/203 (33%), Gaps = 29/203 (14%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+Y RI L + C + C +C R+ G G + + E + Q +
Sbjct: 23 KYA-RIHLPVAPACNIQCNYCNRKYDCSNESRPGVTSGVLNPEQALEKVIMIEQSLENLS 81
Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRY-----IKHV------------QILRFHSRVPIV 187
V G GD L Q L+ L+ I + +I V
Sbjct: 82 VVGIAGPGDALANPTATFQ-TLRLLKAYKAELIPCISTNGLNLPDYIDEIEELGISHVTV 140
Query: 188 DPQRINPELIQCLKEAGKPVYIAIH-ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
++PE+ Q + + H + E + + L GI++ +VL+ G
Sbjct: 141 TMNAVDPEVGQHIYSWIHHEGVTYHGVEAAAKLLERQLQGVEMLVERGILVKINTVLIPG 200
Query: 247 INDDPEILANLMRTFVELRIKPY 269
IND + EL + +
Sbjct: 201 INDSHITEVA--KKIKELGVFIH 221
>gi|113972206|ref|YP_735999.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. MR-4]
gi|113886890|gb|ABI40942.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. MR-4]
Length = 327
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPLIL 157
+ C C +C + K VL ++ LA+I + + + ++ TGG+PL+
Sbjct: 19 VTDRCDFRCVYCMTEDPCFLPKDHVLHLEE----LAWIAQAFTELGVTKIRLTGGEPLVR 74
Query: 158 SH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
S +L +L L +K + + SR+ + L
Sbjct: 75 SDCDQLVHLLGKLPGLKDLSMTTNGSRLSKFAKPMFDAGL 114
>gi|298251942|ref|ZP_06975745.1| molybdenum cofactor biosynthesis protein A [Ktedonobacter racemifer
DSM 44963]
gi|297546534|gb|EFH80402.1| molybdenum cofactor biosynthesis protein A [Ktedonobacter racemifer
DSM 44963]
Length = 331
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 17/133 (12%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+V Y RI + C C +C E + +K +LS ++ + I
Sbjct: 4 LVDSYGRRIKSMRISVTDKCNFRCTYCMPAEGLPWLKKAEILSYEELMRISR-VAVSMGI 62
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINP 194
++ TGG+PL+ L +++ L ++ ++ L + ++ Q RIN
Sbjct: 63 EQIRLTGGEPLVRRD--LPELVHQLHELEGLRSLSLTTNGILLPQQAKALAEAGLTRINV 120
Query: 195 ELIQCLKEAGKPV 207
L L E V
Sbjct: 121 SLDTLLHEKFTQV 133
>gi|229020835|ref|ZP_04177544.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1273]
gi|228740460|gb|EEL90749.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1273]
Length = 307
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 19/154 (12%)
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
F R+ +LS + E I + ++ TGG+PL+ L ++++ L I
Sbjct: 6 FGRDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPLLRKD--LPELIQRLNEI 62
Query: 173 KHVQILRFHSRVPIVDP----------QRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+ V+ + + ++ R+ L L E + N +
Sbjct: 63 EGVEDIGLTTNGSLLKKFAPDLYKAGLSRVTVSL-DSLNEERF-----SYLNGNRSKVKT 116
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+A I A AG+ + V+ KG N+ +
Sbjct: 117 VLAGIQAAAEAGMKIKMNMVVQKGKNEQDIVQMA 150
>gi|152980414|ref|YP_001353667.1| molybdenum cofactor biosynthesis protein A [Janthinobacterium sp.
Marseille]
gi|151280491|gb|ABR88901.1| molybdenum cofactor biosynthesis protein A [Janthinobacterium sp.
Marseille]
Length = 370
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ + ++LS ++ + + ++ TGG+PL
Sbjct: 46 ITDRCNFRCVYCMPKEVFDKDYAFLPQSSLLSFEEITRITSLFVAH-GVEKIRLTGGEPL 104
Query: 156 ILSH-KRLQKVLKTLR 170
+ + ++L +L LR
Sbjct: 105 LRKNVEKLIAMLSALR 120
>gi|330470776|ref|YP_004408519.1| molybdenum cofactor biosynthesis protein a [Verrucosispora maris
AB-18-032]
gi|328813747|gb|AEB47919.1| molybdenum cofactor biosynthesis protein a [Verrucosispora maris
AB-18-032]
Length = 336
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 78/223 (34%), Gaps = 16/223 (7%)
Query: 85 PLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQE 140
P +V RY + L C + C +C E + +L+ + +
Sbjct: 6 PGGLLVDRYGRTARDLRVSLTDKCNLRCTYCMPAEGLPWLAGPQLLTDDEVIRLVRLAVH 65
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS------RVPIVDPQRINP 194
+ + EV FTGG+PLI L ++ + + + + R+
Sbjct: 66 RFGVDEVRFTGGEPLIRP--GLTAIVAAVAALDPRPRISLTTNGIGLARLAPALHAAGLD 123
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+ L + ++ + A + SVL++G+NDD
Sbjct: 124 RVNVSLDTLDRDRFL--RLTRRDRLDDVLAGLAGAAAAGLTPVKVNSVLMRGVNDD--EA 179
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
L+R ++ + ++ L A R ++ ++I+A+L
Sbjct: 180 PALLRFALDHGYELRFIEQMPLDAQHGWDRSSMVTAEEILATL 222
>gi|303229415|ref|ZP_07316205.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
atypica ACS-134-V-Col7a]
gi|302515951|gb|EFL57903.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
atypica ACS-134-V-Col7a]
Length = 472
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + + + ++ VI
Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+G DPL L +L++++ I ++
Sbjct: 140 ESGEDPLNNP---LDYILESIKTIYSIKNK 166
>gi|254479764|ref|ZP_05093042.1| MiaB-like tRNA modifying enzyme [Carboxydibrachium pacificum DSM
12653]
gi|214034296|gb|EEB75092.1| MiaB-like tRNA modifying enzyme [Carboxydibrachium pacificum DSM
12653]
Length = 429
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 13/113 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C YC +C G + + Y + E++ TG
Sbjct: 134 RTRAYIKIEDGCNQYCTYCIIPYARGPVRSRKP-ENIIKEVKKY--AEHGYKEIVLTGIH 190
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
D L + L V+K + ++ ++ +R S P + + EL
Sbjct: 191 IASYGRD---LKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTEDVVKELANL 240
>gi|222529273|ref|YP_002573155.1| MiaB family RNA modification enzyme [Caldicellulosiruptor bescii
DSM 6725]
gi|222456120|gb|ACM60382.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor bescii
DSM 6725]
Length = 434
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 27/229 (11%), Positives = 77/229 (33%), Gaps = 23/229 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFT- 150
R +K+ C +C +C G+ + L ++ + ++ I + +
Sbjct: 141 RSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSLKSIEEEVIRLVQKGYKEFVITGINISS 200
Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
G D + L V++ + I+ V+ +R S P++ L+ + +++
Sbjct: 201 YGKD--LDEKVTLIDVIERVNKIEGVKRIRLSSLEPVIMNGEFIERLLS-FDKLCHHLHL 257
Query: 210 AIHANHPYEF--------SEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRT 260
++ + + + + + R+ + + ++ G + E +
Sbjct: 258 SLQSGSDKILKLMNRHYTTAQYQSIVDRIREKWDDVAFTTDIIVGFPGETEEDFNATLDF 317
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLT-------IEEGQKIVASLKEKIS 302
++ ++ GT + + E KI+ + +S
Sbjct: 318 VQKIGFSRIHVFRFSPKKGTKAYEMPNQVDSKEKERRSKIMKEVAASLS 366
>gi|313885881|ref|ZP_07819621.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas asaccharolytica PR426713P-I]
gi|312924636|gb|EFR35405.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas asaccharolytica PR426713P-I]
Length = 157
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C +C C + GT L+ + + I + + +GGDP+ + L
Sbjct: 25 GCSHHCPGCHNPDSHNPLVGTPLTEAYLQQIIDDINNNPLLDGITLSGGDPMFCPEELL- 83
Query: 164 KVLKTLRY 171
+LK L+
Sbjct: 84 TLLKRLKS 91
>gi|283853643|ref|ZP_06370877.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. FW1012B]
gi|283570976|gb|EFC19002.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. FW1012B]
Length = 432
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 67/175 (38%), Gaps = 17/175 (9%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL+ILP + +G P + P LK+ C CR+C + G
Sbjct: 105 LPT--ELDILPGRLAEALGAEAADPTGRLASTPPSYAYLKIAEGCDHACRYCTIPSIRGG 162
Query: 121 QKGTVLSS--KDTEAALAYIQEKSQI--WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
L ++ L + + +V G D L L LQ +L+ L + ++
Sbjct: 163 LVSRPLPGLVEEARGLLDRGVSELVVVAQDVTAYGRD-LGLKDG-LQALLEKLLPLSGLK 220
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISR 229
LR + P + L+ L AG+P Y I H E +AA++R
Sbjct: 221 WLRL----LYLYPSGVTDGLLSFLAGAGRPFVPYFDIPFQH---VHPEMLAAMAR 268
>gi|206901313|ref|YP_002251416.1| heme biosynthesis protein, putative [Dictyoglomus thermophilum
H-6-12]
gi|206740416|gb|ACI19474.1| heme biosynthesis protein, putative [Dictyoglomus thermophilum
H-6-12]
Length = 326
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 68/202 (33%), Gaps = 27/202 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-----EVIFTGGD 153
+ C + CR C++ + L + + I + V TGG+
Sbjct: 9 WHITDFCNLRCRHCYQENF---DRSRELPFEKLVHIIEDIATFLKKEGFDRLSVNLTGGE 65
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PLI L ++LKTL + V + + I+ P ++ E + LK YI +
Sbjct: 66 PLIYP--HLNQILKTLNKVDIVHEINIITNG-ILSPNKVIEESYEKLK------YIKVSL 116
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
E + + I ++ + L I R ++ Y L
Sbjct: 117 EGAKEETNDLIRGRGNFQR---VVGNLKNLRYDFLFMFTIAKYNYRELDDM----YRLAQ 169
Query: 274 PDLAAGT--SHFRLTIEEGQKI 293
A G F + I EG KI
Sbjct: 170 TLGAKGFILERF-IPIGEGLKI 190
>gi|124112108|ref|YP_001019104.1| beta subunit of RNA polymerase [Chlorokybus atmophyticus]
gi|158564117|sp|Q19V98|RPOB_CHLAT RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|124012217|gb|ABD62240.2| beta subunit of RNA polymerase [Chlorokybus atmophyticus]
Length = 1088
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 17/161 (10%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGT 124
E E DP +N+ YP+R + +F + +G
Sbjct: 208 EFFQKTIEEGDPYSENDALIDLH-SQLYPERPSTLFAARELLKSKFFDPKYYDLGKVGRY 266
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK--RLQKVLKTLRYIKHVQILRFHS 182
++ K + I+ + T D L L+ + TL I H++ R S
Sbjct: 267 KINKKLQLSIPEDIR--------VLTPQDILTAIDYLINLEFNIGTLDDIDHLKNRRVRS 318
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
+ I ++ L + Y + +HP + +
Sbjct: 319 VG-----ELIENQVRVGLSRLERMTYKRMAESHPDALTPAS 354
>gi|302542868|ref|ZP_07295210.1| radical SAM [Streptomyces hygroscopicus ATCC 53653]
gi|302460486|gb|EFL23579.1| radical SAM [Streptomyces himastatinicus ATCC 53653]
Length = 321
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 28/185 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P L++ C + CR C+ G +S D + + + +V F GG+
Sbjct: 8 PQFAWLEITGFCNLNCRHCYANSSSQGDHG-DMSDADWIRVIDQLNG-LGVRDVQFIGGE 65
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYI--- 209
P L + L H ++ R+ + I PE+ + L G +
Sbjct: 66 P------TLHQSLPAFIRHAH----KYAMRIEVFSNMTHIRPEVWEALTLPGVRLAFSYY 115
Query: 210 -AIHANHPYEFSEE------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+H E +E A + + GI + ++ + E AN +
Sbjct: 116 SDNETDH-DEVTEVRGSHARTRANVEKARELGIKMR--GSVIHVLEGQRE--ANAHHELL 170
Query: 263 ELRIK 267
+L I+
Sbjct: 171 QLGIR 175
>gi|295696236|ref|YP_003589474.1| RNA modification enzyme, MiaB family [Bacillus tusciae DSM 2912]
gi|295411838|gb|ADG06330.1| RNA modification enzyme, MiaB family [Bacillus tusciae DSM 2912]
Length = 484
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
+ + + + C YC +C G ++ + E +A +++ + I EV G +
Sbjct: 187 KAWVNIQYGCNKYCTYCIVPFTRGRERSRLP-----EDVVAEVKQLAEEGIREVTLLGQN 241
Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
L L +L+ + I ++ +RF + P +LI +
Sbjct: 242 VNDYGLDLGDVDFADLLQQVARIPGIERVRFTTSN----PWNFTDKLIDVIAA 290
>gi|218128607|ref|ZP_03457411.1| hypothetical protein BACEGG_00177 [Bacteroides eggerthii DSM 20697]
gi|317475589|ref|ZP_07934851.1| MiaB-like tRNA modifying enzyme [Bacteroides eggerthii 1_2_48FAA]
gi|217989209|gb|EEC55523.1| hypothetical protein BACEGG_00177 [Bacteroides eggerthii DSM 20697]
gi|316908293|gb|EFV29985.1| MiaB-like tRNA modifying enzyme [Bacteroides eggerthii 1_2_48FAA]
Length = 443
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 15/168 (8%)
Query: 67 LNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
L + S R LK+ C YC +C G +
Sbjct: 120 LQKHETGEAYTSALKDIRSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTIPFARGRSRNGS 179
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++S E A E++ TG GD + + ++K L ++ ++ R S
Sbjct: 180 VAS-LVEQARQ--AAAEGGKEIVLTGVNIGDFGKTTGETFFDLVKALDEVEGIERYRISS 236
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
++P + E+I+ + + + H + P S+E + + R
Sbjct: 237 ----IEPNLLTDEIIEFVSRSKR---FMPHFHIPLQSGSDEVLKLMRR 277
>gi|325968827|ref|YP_004245019.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
gi|323708030|gb|ADY01517.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 380
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 72/178 (40%), Gaps = 25/178 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-IFTGG 152
P + + CP+ CR C R + T LS+++++ + + + + V I TGG
Sbjct: 18 PLLVFYETTKACPLACRHC-RANALLKPLPTELSTEESKRFIEDLTGFGKPYPVLILTGG 76
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFH-SRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
DPL L I H + L + P V + +N +L++ L+E + I++
Sbjct: 77 DPLTRDD--------ILELIDHAKSLGIPVALSPAVSTKLLNDDLLKELRERVNSISISL 128
Query: 212 HANHPY-------------EFSEEAIAAISRLANAGIILLSQSVLLK-GINDDPEILA 255
P + + S+L + GI + ++K +++ P++
Sbjct: 129 DGARPETHNYIRRTALERIDVFRTTLEIFSKLRSYGIEFQVNTAVMKLNVHELPQVFK 186
>gi|313157725|gb|EFR57136.1| tRNA methylthiotransferase YqeV [Alistipes sp. HGB5]
Length = 432
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 13/128 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C C +C G + D A I Q E++ TG
Sbjct: 142 RTRAFLKVQDGCDYKCAYCTIHYARGGS--RNMPIADLVAEARQIAAAGQ-KEIVITGIN 198
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + +R +L+ L ++ ++ R S ++P + E+I + K
Sbjct: 199 TGDFGRTTGERFIDLLRALNEVEGIERYRISS----IEPNLLTDEIIAFCAASPK---FQ 251
Query: 211 IHANHPYE 218
H + P +
Sbjct: 252 HHFHIPLQ 259
>gi|117922513|ref|YP_871705.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. ANA-3]
gi|117614845|gb|ABK50299.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. ANA-3]
Length = 327
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPLIL 157
+ C C +C + K VL ++ LA+I + + + ++ TGG+PL+
Sbjct: 19 VTDRCDFRCVYCMTEDPCFLPKDHVLHLEE----LAWIAQAFTELGVTKIRLTGGEPLVR 74
Query: 158 SH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
S +L +L L +K + + SR+ + L
Sbjct: 75 SDCDQLVHLLGKLPGLKDLSMTTNGSRLSKFAKPMFDAGL 114
>gi|294675020|ref|YP_003575636.1| Fe-S oxidoreductase [Prevotella ruminicola 23]
gi|294471944|gb|ADE81333.1| putative Fe-S oxidoreductase [Prevotella ruminicola 23]
Length = 361
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI--FTGGD 153
++ + C + CR C + + +D L I +K+ +V +GG+
Sbjct: 32 QLFWECTLRCDLKCRHCGSDCKM-KSDSRDMPKEDFLRVLDGIAKKTDPHKVFVIISGGE 90
Query: 154 PLILSHKRLQKVLKTLRY 171
PL+ +++ + +
Sbjct: 91 PLMRQD--IEECGRAIYD 106
>gi|288801250|ref|ZP_06406705.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str.
F0039]
gi|288331861|gb|EFC70344.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str.
F0039]
Length = 447
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 11/124 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + +SS + E A + E++ TG
Sbjct: 154 RTRYFLKVQDGCSYFCTYCTIPFARGFSRNPSISSLVEQAEQA-----AREGGKEIVLTG 208
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD + +++ ++K L ++ ++ R S P + I E + +
Sbjct: 209 VNIGDFGVSTNETFFDLIKALDKVEGIKRFRISSLEPDLLSDEI-IEYCANSRAFMPHFH 267
Query: 209 IAIH 212
+ +
Sbjct: 268 LPLQ 271
>gi|242373881|ref|ZP_04819455.1| 2-methylthioadenine synthase [Staphylococcus epidermidis M23864:W1]
gi|242348435|gb|EES40037.1| 2-methylthioadenine synthase [Staphylococcus epidermidis M23864:W1]
Length = 451
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 21/123 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C +C FC + ++ S+D E + + S E++ TG
Sbjct: 145 RTRASLKIQEGCNNFCTFC-----IIPWARGLMRSRDPEKVVEQASQLVNSGYKEIVLTG 199
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++L+ L I ++ +R S ++ ++ E+I+ + +
Sbjct: 200 IHTGGYGQD---LKNYNLAQLLRDLDEIDGLERIRISS----IEASQLTDEVIEVIGNSN 252
Query: 205 KPV 207
K V
Sbjct: 253 KVV 255
>gi|229106153|ref|ZP_04236707.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
gi|228677271|gb|EEL31594.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
Length = 373
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 65/178 (36%), Gaps = 20/178 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E + ++FTGGD
Sbjct: 10 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDNIYEMNNPM-LVFTGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + + + +R S P P + E IQ KE G +
Sbjct: 68 PLMRPD------IYDIADYAIKKGVRL-SMTPSATPN-VTKETIQKAKEVGIARWAFSLD 119
Query: 209 -----IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H E I AI L I + +V+ + E +A L+
Sbjct: 120 GPTAEIHDHFRGVEGSFELTINAIRYLHELEIPVQINTVISNYNVNVLEDMAKLVEEL 177
>gi|332296288|ref|YP_004438211.1| Radical SAM domain protein [Thermodesulfobium narugense DSM 14796]
gi|332179391|gb|AEE15080.1| Radical SAM domain protein [Thermodesulfobium narugense DSM 14796]
Length = 216
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 12/104 (11%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C + CR+C ++ + +LS + + + +V+ TGG+PLI + L
Sbjct: 30 QGCNLRCRWCDTKDSQSIEAKYMLS---IDEVIDRCKNH----KVLITGGEPLI-QEETL 81
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
K++ L H ++ + I P + + + + P
Sbjct: 82 -KLIDRLIERHH--FVQIETNGSIFLPSGYSSD-CGWVVDYKGP 121
>gi|329957659|ref|ZP_08298134.1| tRNA methylthiotransferase YqeV [Bacteroides clarus YIT 12056]
gi|328522536|gb|EGF49645.1| tRNA methylthiotransferase YqeV [Bacteroides clarus YIT 12056]
Length = 445
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 15/168 (8%)
Query: 67 LNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
L + S R LK+ C YC +C G +
Sbjct: 120 LKKHESGEAYTSALKDIRSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTIPFARGRSRNGS 179
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++S E A E++ TG GD + + ++K L ++ ++ R S
Sbjct: 180 IAS-LVEQARQ--AAAEGGKEIVLTGVNIGDFGKSTGETFFDLVKALDEVEGIERYRISS 236
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
++P + E+I+ + + + H + P S+E + + R
Sbjct: 237 ----IEPNLLTDEIIKFVSRSKR---FMPHFHIPLQSGSDEVLKLMRR 277
>gi|302873840|ref|YP_003842473.1| Radical SAM domain-containing protein [Clostridium cellulovorans
743B]
gi|307689915|ref|ZP_07632361.1| Radical SAM domain-containing protein [Clostridium cellulovorans
743B]
gi|302576697|gb|ADL50709.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
Length = 467
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQ 121
E+ I + + + RY P+ ++L L +VC C +C GS+
Sbjct: 99 PHEIQTDLSCDPMRILKKSSTKWQYNPVRYESPEELVLSLSYVCNHKCIYCCNSS--GSR 156
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
LS D + + ++F+GG+PL+
Sbjct: 157 IEDELSFNDWIKVIDE-AADLGVETILFSGGEPLMYPD 193
>gi|33469596|gb|AAQ19837.1| molybdenum cofactor biosynthesis protein A [Alcaligenes faecalis]
Length = 364
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 81/228 (35%), Gaps = 20/228 (8%)
Query: 90 VHRYPDRIL-LKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H P R L + + C C +C R V + +LS ++ E I
Sbjct: 32 QHGRPVRDLRISVTDRCNFRCTYCMPREVFDDRFVFLPRQDMLSFEEIERLAR-IFVGLG 90
Query: 144 IWEVIFTGGDPLILSH-KRLQKVLKTL----RYIKHV---QILRFHSRVPIVDPQRINPE 195
+ ++ +GG+PL+ + L L L + + SR V +
Sbjct: 91 VRKLRLSGGEPLMRKDLQDLVAKLAQLHTPDEAMPEIALTTNASLLSRKAAVLARAGLAR 150
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEIL 254
+ L V+ + + ++ + I AG+ + V+ +G+N+D +
Sbjct: 151 VNVSLDAIDSAVFQRMTDSAV--LVDDVLNGIDAAQKAGLGPIKVNMVVRRGMNEDQ--I 206
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
++R F ++ D+ + + +I+++++ +
Sbjct: 207 LPMVRHFRGSGHVLRFIEFMDVGNSNKWQQNDVFTAAEILSTIQSEHP 254
>gi|295092195|emb|CBK78302.1| MiaB-like tRNA modifying enzyme [Clostridium cf. saccharolyticum
K10]
Length = 443
Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 30/141 (21%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C G + S +D + + E++ TG
Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSR--SMEDVVQEVEALAASGY-KEIVLTG-- 196
Query: 154 PLILS---------------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ LS L ++ L I ++ +R S ++P+ I E +
Sbjct: 197 -IHLSSYGADFKRTAENPEAAADLLSLIVRLDRIPGIERIRLGS----LEPRIITDEFAE 251
Query: 199 CLK-----EAGKPVYIAIHAN 214
L + + N
Sbjct: 252 TLAGLKSFCPHFHLSLQSGCN 272
>gi|160939106|ref|ZP_02086457.1| hypothetical protein CLOBOL_04000 [Clostridium bolteae ATCC
BAA-613]
gi|158438069|gb|EDP15829.1| hypothetical protein CLOBOL_04000 [Clostridium bolteae ATCC
BAA-613]
Length = 459
Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 77/227 (33%), Gaps = 38/227 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKG---TVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152
LK+ C C +C + G + L + + A A ++E + E G
Sbjct: 160 AFLKIAEGCDKRCTYCIIPYLRGPYRSVPIEQLVKEARQLAEAGVKELILVAQETTLYGR 219
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
D + K L ++L+ L I + +R P+ I ELI+ ++ K Y+ I
Sbjct: 220 D--LYGEKCLPRLLRELAKIPGIYWIRIQ----YCYPEEITDELIETIRTEEKVCNYLDI 273
Query: 212 HANHPYEFS----------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
H + EE + I +L + ++ L+ G + E + F
Sbjct: 274 PIQHASDRILKRMGRRTNKEELMERIGKLRQEIPDIAIRTTLISGFPGETESDHEELMDF 333
Query: 262 V------ELRIKPYY-------LHHPDLAAGTSHFRLTIEEGQKIVA 295
V L + Y +PD + E +I+
Sbjct: 334 VNEMEFERLGVFAYSAEEDTPAFSYPDQVPE----EVKEERRDEIME 376
>gi|120597074|ref|YP_961648.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. W3-18-1]
gi|146291496|ref|YP_001181920.1| molybdenum cofactor biosynthesis protein A [Shewanella putrefaciens
CN-32]
gi|120557167|gb|ABM23094.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. W3-18-1]
gi|145563186|gb|ABP74121.1| GTP cyclohydrolase subunit MoaA [Shewanella putrefaciens CN-32]
Length = 337
Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 77/213 (36%), Gaps = 25/213 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C K LS + E ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELR---I 266
+ + +E + I +AG + +VLLKG+ND +L R ++ I
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND-----KDLPRFLHWIKHTPI 194
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
++ + G +F+ G I A L
Sbjct: 195 DLRFIELMETGLGREYFQAHHLAGADIKAQLLA 227
>gi|314933749|ref|ZP_07841114.1| Fe-S oxidoreductase [Staphylococcus caprae C87]
gi|313653899|gb|EFS17656.1| Fe-S oxidoreductase [Staphylococcus caprae C87]
Length = 448
Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 21/123 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C +C FC + ++ S+D E + + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFC-----IIPWARGLMRSRDPEKVVEQASQLVNSGYKEIVLTG 196
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++L+ L I+ ++ +R S ++ ++ E+I+ + +
Sbjct: 197 IHTGGYGQD---LKNYNLAQLLRDLDEIEGLERIRISS----IEASQLTDEVIEVIGNSN 249
Query: 205 KPV 207
K V
Sbjct: 250 KVV 252
>gi|296273084|ref|YP_003655715.1| MiaB-like tRNA modifying protein [Arcobacter nitrofigilis DSM 7299]
gi|296097258|gb|ADG93208.1| MiaB-like tRNA modifying enzyme [Arcobacter nitrofigilis DSM 7299]
Length = 421
Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 10/125 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G + S + + E I TG +
Sbjct: 139 KSRAFIKIQEGCDFRCSYCIIPYVRGDARSY--SEDKILEQITTLASN-GFGEFILTGTN 195
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K+ L K+LK + IK V+ +R S ++P +I+ E + + E ++
Sbjct: 196 VGSYGKKKHTSLAKLLKKISLIKGVRRIRMGS----IEPIQIDDEFKEIIDEPFMARHLH 251
Query: 211 IHANH 215
I H
Sbjct: 252 IALQH 256
>gi|183982863|ref|YP_001851154.1| oxidoreductase [Mycobacterium marinum M]
gi|183176189|gb|ACC41299.1| conserved hypothetical oxidoreductase [Mycobacterium marinum M]
Length = 389
Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 60/161 (37%), Gaps = 27/161 (16%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW----------EV 147
++K +C + C++C+ E + T +S AL I++ + + ++
Sbjct: 4 VIKTSKLCNLRCKYCYEWEHLSDP--TRMSESVWRDALVAIRDYADLTTRRCGYDIPVDI 61
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-KHV----QILRFHSRVPIVDPQRINPELIQCLKE 202
I+ GG+P +L + ++V R + + +R V + + E + E
Sbjct: 62 IWHGGEPTLLPREYFERVFALQREVFPSDWLQSRRVR---NVLQTNLYSVRDEHLDVFAE 118
Query: 203 AGKPVYIAIHANHPYEFS-------EEAIAAISRLANAGII 236
+ I++ + + I RL + G+
Sbjct: 119 HDVELGISVDFAEGVRLTAGGKRTEAAVRSNIRRLQDRGLP 159
>gi|297584652|ref|YP_003700432.1| RNA modification enzyme, MiaB family [Bacillus selenitireducens
MLS10]
gi|297143109|gb|ADH99866.1| RNA modification enzyme, MiaB family [Bacillus selenitireducens
MLS10]
Length = 441
Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 22/146 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + A ++ E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRKP-EDVLSQANQLVEA--GYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + L +L+ L I+ ++ +R S ++ +I E+I+ + + K
Sbjct: 199 TGGYGED---MKDYNLAGLLRDLETIEGLRRIRISS----IEASQITDEVIEVINRSDK- 250
Query: 207 VYIAIHANHPYEFSEEAIAAISRLAN 232
+ H + P + + R+
Sbjct: 251 --VVNHLHIP--LQSGSDTVLKRMRR 272
>gi|300312178|ref|YP_003776270.1| FeMo cofactor biosynthesis protein [Herbaspirillum seropedicae
SmR1]
gi|300074963|gb|ADJ64362.1| FeMo cofactor biosynthesis protein [Herbaspirillum seropedicae
SmR1]
Length = 525
Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 34/241 (14%), Positives = 64/241 (26%), Gaps = 36/241 (14%)
Query: 69 ILPEEREDPIGDN-NHSPLKGIV-HRYPDRILLKLLHVCPVYCRFCFRRE------MVGS 120
P + + + + P H + R+ + + C + C +C R+ G
Sbjct: 43 DGPADMAPEVWEKVKNHPCYSEEAHHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGV 102
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL---------------ILSHKRLQK 164
+ + + A Q+ + G GDPL +L
Sbjct: 103 VSEKLTPEQAAKKVFAVASTIPQMTVLGIAGPGDPLANPAKTFKTFELISQTAPDIKLCL 162
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELI------QCLKEAGKPVYIAIHANHPYE 218
L H+ + VD I ++ +
Sbjct: 163 STNGLALPDHIDTIA----AFNVDHVTITINMVDPEIGQHIYPWIYYQNKRWTGIDAARI 218
Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
E + + L GI+ SV++ GIND + R + + A
Sbjct: 219 LHERQMLGLEMLTARGILCKVNSVMIPGINDQHLVEV--NRAVKSRGAFLHNIMPLISAP 276
Query: 279 G 279
Sbjct: 277 E 277
>gi|256544964|ref|ZP_05472334.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Anaerococcus vaginalis ATCC 51170]
gi|256399351|gb|EEU12958.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Anaerococcus vaginalis ATCC 51170]
Length = 166
Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 85 PLKGIVHRY-----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
G + +Y P + C C+ CF +E + G + + K T+ + Y++
Sbjct: 1 MRYGQIRKYDVANGPGIRTSFFVTGCHANCKNCFNKEYMDPNFGNLWTDKQTQEIITYLK 60
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+ +I + GG+P S + L K++K +R
Sbjct: 61 KD-EIEGLTILGGEPFE-STEDLIKIVKKIR 89
>gi|312879755|ref|ZP_07739555.1| MiaB-like tRNA modifying enzyme [Aminomonas paucivorans DSM 12260]
gi|310783046|gb|EFQ23444.1| MiaB-like tRNA modifying enzyme [Aminomonas paucivorans DSM 12260]
Length = 454
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 10/108 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTG 151
R +K+ C CR+C + G E L ++ S EV+ TG
Sbjct: 152 HTRAFVKVQDGCSHGCRYCIVPRVRGRSVSRPP-----EDVLEEVRGLVGSGCREVVLTG 206
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
+ R L +++K L ++ + LRF S P + + L
Sbjct: 207 VHLGLYGRDRGTDLGELVKRLARVEGLVRLRFGSLEPFGLGESLLDVL 254
>gi|291087012|ref|ZP_06345142.2| radical SAM domain protein [Clostridium sp. M62/1]
gi|291076635|gb|EFE13999.1| radical SAM domain protein [Clostridium sp. M62/1]
Length = 462
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E + +++ + + AL ++ S EV F GG+PL
Sbjct: 97 LHIAHDCNLACRYCFAEEGEYHGRRALMTYEVGKKALDFLVANSGNRINLEVDFFGGEPL 156
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFH-SRVPIVDPQRINP 194
+ K+L ++L H + RF + ++ I
Sbjct: 157 MNWDVVKQLVAYGRSLEK-PHNKKFRFTLTTNGVLLNDEIME 197
>gi|116748310|ref|YP_844997.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697374|gb|ABK16562.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 331
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 29/188 (15%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
V ++P ++L+ H C + C C R T+ + L + E V
Sbjct: 23 VEKFPLVLMLEPTHRCNLTCSGCGRIR---EYHDTLHQEMTLDECLRSVDESPSPV-VTI 78
Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGG+PL+ S R+Q ++ + L KH+ F + ++ E + + +
Sbjct: 79 TGGEPLLYS--RIQALVDSVLARKKHI---YFCTNALLL------EESLPMFQPHSHFTW 127
Query: 209 IAIHANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+H + + A+A + G + + + + + D + L L
Sbjct: 128 -NVHFDGTETVHDAIIGRPGGFQKALAGVRAAKARGFRVSTNTTVYR--ETDVDDLERLF 184
Query: 259 RTFVELRI 266
+
Sbjct: 185 EQLAAAGV 192
>gi|305390399|gb|ADM52724.1| NifB [Paenibacillus sabinae]
Length = 458
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 80/247 (32%), Gaps = 37/247 (14%)
Query: 67 LNILPEEREDPIGDNNHSPLKGI---VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ P +++ S HR+ R+ + + C + C +C R+ ++
Sbjct: 1 MKPQPTSCLSNAAEDDISRHPCYSEEAHRFFARMHIPVAPACNIQCNYCNRKFDCVNESR 60
Query: 124 -----TVLSSKDTEAALAYIQEKSQIWEV--IFTGGDPL---------------ILSHKR 161
VL+ + E + + + V I GDPL +
Sbjct: 61 PGVVSEVLTPEQAERKVKGVAAQLMQLSVVGIAGPGDPLANADKTFDTFARVRKHVPDVM 120
Query: 162 LQKVLKTLRYIKHV-QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA-----NH 215
L L +H+ +I+ + I+P+ + + P
Sbjct: 121 LCLSTNGLTLYRHIDRIVELGINHVTITINAIDPD----VGKEIYPWVFDEGVRYEGREA 176
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
+ + LA GI++ S+++ G+ND + + EL + +
Sbjct: 177 AALLISRQLQGVEALAKQGILVKVNSIMIPGVNDQHLVEV--SKKVKELGATLHNVTPLI 234
Query: 276 LAAGTSH 282
+A G+ +
Sbjct: 235 IAPGSQY 241
>gi|301067439|ref|YP_003789462.1| hypothetical protein LCAZH_2405 [Lactobacillus casei str. Zhang]
gi|300439846|gb|ADK19612.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
Length = 99
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 34/92 (36%)
Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
++ E+ + AG+I L++ +++ I + + R+ ++
Sbjct: 8 WTRESREKVKAAIKAGLITLTRIIVMNVHGSKGVINQAQRQKLIASRLNLKHIKTRGPFR 67
Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
HF+ + G ++ +++ + +
Sbjct: 68 QLKHFKTSSSYGIELTRRMQQSKPNIAINKLV 99
>gi|223044380|ref|ZP_03614414.1| conserved hypothetical protein [Staphylococcus capitis SK14]
gi|222442249|gb|EEE48360.1| conserved hypothetical protein [Staphylococcus capitis SK14]
Length = 448
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 21/123 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C +C FC + ++ S+D E + + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFC-----IIPWARGLMRSRDPEKVVEQASQLVNSGYKEIVLTG 196
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++L+ L I+ ++ +R S ++ ++ E+I+ + +
Sbjct: 197 IHTGGYGQD---LKNYNLAQLLRDLDEIEGLERIRISS----IEASQLTDEVIEVIGNSN 249
Query: 205 KPV 207
K V
Sbjct: 250 KVV 252
>gi|148655095|ref|YP_001275300.1| radical SAM domain-containing protein [Roseiflexus sp. RS-1]
gi|148567205|gb|ABQ89350.1| Radical SAM domain protein [Roseiflexus sp. RS-1]
Length = 367
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 10/83 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----VIF 149
P I ++ C + CR C M E ++ ++++ + +I
Sbjct: 22 PLNIYWEMTQACALACRHCRAEAMPHP----HPLQLSFEESVRFLRQIPDFGDPMPQLIL 77
Query: 150 TGGDPLILSHKRLQKVLKTLRYI 172
TGGDPL L ++ R +
Sbjct: 78 TGGDPLARPD--LLDLIDAARAL 98
>gi|304411770|ref|ZP_07393382.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS183]
gi|307306178|ref|ZP_07585923.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
BA175]
gi|304349958|gb|EFM14364.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS183]
gi|306911051|gb|EFN41478.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
BA175]
Length = 337
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 76/213 (35%), Gaps = 25/213 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C K LS + E ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELR---I 266
+ + +E + I +AG + +VLLKG+ND +L R ++ I
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND-----KDLPRFLHWIKNTPI 194
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
++ + G +F G I A L
Sbjct: 195 DLRFIELMETGLGREYFEAHHLAGADIKAQLLA 227
>gi|217964860|ref|YP_002350538.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
HCC23]
gi|217334130|gb|ACK39924.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
HCC23]
Length = 303
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 19/143 (13%)
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
VLS + + + + K I +V TGG+PL+ + + ++++ L I ++ +
Sbjct: 10 PHEKVLSKDEIVSFME-LMVKFGIKKVRITGGEPLLRTD--IVEIVRGLGAIPEIEDISI 66
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAI----HANHPYEFS-----EEAIAAISRLA 231
+ + + + LKEAG HA+H + ++ + I +
Sbjct: 67 TTNAMYLAKK------AEALKEAGLTRVNISLDSLHADHFQAITRGGRLQKVLDGIQKAE 120
Query: 232 NAG-IILLSQSVLLKGINDDPEI 253
G + VL+KG NDD
Sbjct: 121 EVGLFPIKLNVVLIKGQNDDEIT 143
>gi|46578994|ref|YP_009802.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
str. Hildenborough]
gi|120603415|ref|YP_967815.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
DP4]
gi|46448407|gb|AAS95061.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
str. Hildenborough]
gi|120563644|gb|ABM29388.1| GTP cyclohydrolase subunit MoaA [Desulfovibrio vulgaris DP4]
gi|311232845|gb|ADP85699.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
RCH1]
Length = 341
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 18/179 (10%)
Query: 82 NHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAY 137
+ P +V + R+ + C + C +C+ M +L ++ +
Sbjct: 5 DDRPASSLVDLHGRRVRYLRLSVTDRCNLRCLYCWGGGGMRFIPHDDILRYEEMARLVD- 63
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPEL 196
+ +S + +V TGG+PL+ + L L KH I LR + +++
Sbjct: 64 VAVESGVEKVRLTGGEPLVRKNVL---HLVELVRKKHPAIDLRITTNGTLLESHVAG--- 117
Query: 197 IQCLKEAGKPVYIAI------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
++ L + V + H +F + +A + + AG+ L +V L+G+ND
Sbjct: 118 LRDLGVSTVNVSLDTFRREVFHEVTGRDFLPQVMAGMEAVLAAGLSLKVNAVALRGVND 176
>gi|325967847|ref|YP_004244039.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
gi|323707050|gb|ADY00537.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 385
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+++ L + + + + + L H C + CR C+ + G LS D L ++
Sbjct: 28 EDNNELPYLSMNFINDVTIYLTHACNLECRHCYL--LAGKPLSNELSIDDWLLILDKLR- 84
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
V GG+P++L + L K++ + +
Sbjct: 85 DLGAKYVYLLGGEPMLLIRRGLLKIISHAKDL 116
>gi|237711557|ref|ZP_04542038.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237725989|ref|ZP_04556470.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265752984|ref|ZP_06088553.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229435797|gb|EEO45874.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229454252|gb|EEO59973.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263236170|gb|EEZ21665.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 360
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGD 153
++ + C ++CR C + + +D L + ++ + VI TGG+
Sbjct: 33 QLFWECTLRCNLHCRHCGSDCKKIA-GHPDMPKEDFLRVLDSVSAQNDPHKIFVIITGGE 91
Query: 154 PLILSHKRLQKVLKTLRY 171
PL+ L++ + +
Sbjct: 92 PLMRKD--LEECGRAIYE 107
>gi|255656734|ref|ZP_05402143.1| putative radical SAM family protein [Clostridium difficile
QCD-23m63]
gi|296452437|ref|ZP_06894138.1| radical SAM domain protein [Clostridium difficile NAP08]
gi|296877786|ref|ZP_06901812.1| radical SAM domain protein [Clostridium difficile NAP07]
gi|296258767|gb|EFH05661.1| radical SAM domain protein [Clostridium difficile NAP08]
gi|296431237|gb|EFH17058.1| radical SAM domain protein [Clostridium difficile NAP07]
Length = 459
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 80 DNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
++ + VHR P + L + H C + C++CF + + ++S + +AA+ Y
Sbjct: 77 EDTYQYHPSFVHREPVVKALCLNVAHDCNLKCKYCFAAQGDFGGEKELMSFEVGKAAIDY 136
Query: 138 IQEKSQIW---EVIFTGGDPLI 156
+ S E+ F GG+PL+
Sbjct: 137 LIANSGSRKNLEIDFFGGEPLM 158
>gi|254283802|ref|ZP_04958770.1| D,D-heptose 1,7-bisphosphate phosphatase [gamma proteobacterium
NOR51-B]
gi|219680005|gb|EED36354.1| D,D-heptose 1,7-bisphosphate phosphatase [gamma proteobacterium
NOR51-B]
Length = 181
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 8/76 (10%)
Query: 218 EFSEEAIAAISRLANAG---IILLSQSVLLKGINDDPEILA---NLMRTFVELRIKPY-- 269
EF AI + RL G I++ +QS + +G D+ A + + E ++
Sbjct: 30 EFLPGAIEGMRRLQEHGCRIIVITNQSGIGRGFYDEAVFEALTDTMCQHLQEQGVRIDRV 89
Query: 270 YLHHPDLAAGTSHFRL 285
Y FR+
Sbjct: 90 YFCPHHPEKALGDFRV 105
>gi|171058974|ref|YP_001791323.1| molybdenum cofactor biosynthesis protein A [Leptothrix cholodnii
SP-6]
gi|170776419|gb|ACB34558.1| molybdenum cofactor biosynthesis protein A [Leptothrix cholodnii
SP-6]
Length = 381
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKG-----TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C +E+ +LS ++ I + + ++ TGG+PL
Sbjct: 48 VTDRCNFRCSYCMPKEVFDKNHQFLPHAQLLSFEEITRLAR-IFVERGVRKIRLTGGEPL 106
Query: 156 ILSH-KRLQKVLKTLR 170
+ + +RL ++L LR
Sbjct: 107 LRKNIERLIEMLAVLR 122
>gi|126700364|ref|YP_001089261.1| putative radical SAM family protein [Clostridium difficile 630]
gi|115251801|emb|CAJ69636.1| putative radical SAM-family protein [Clostridium difficile]
Length = 459
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 80 DNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
++ + VHR P + L + H C + C++CF + + ++S + +AA+ Y
Sbjct: 77 EDTYQYHPSFVHREPVVKALCLNVAHDCNLKCKYCFAAQGDFGGEKELMSFEVGKAAIDY 136
Query: 138 IQEKSQIW---EVIFTGGDPLI 156
+ S E+ F GG+PL+
Sbjct: 137 LIANSGSRKNLEIDFFGGEPLM 158
>gi|160873411|ref|YP_001552727.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS195]
gi|160858933|gb|ABX47467.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS195]
gi|315265640|gb|ADT92493.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS678]
Length = 337
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 76/213 (35%), Gaps = 25/213 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C K LS + E ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELR---I 266
+ + +E + I +AG + +VLLKG+ND +L R ++ I
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND-----KDLPRFLHWIKNTQI 194
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
++ + G +F G I A L
Sbjct: 195 DLRFIELMETGLGREYFEAHHLAGADIKAQLLA 227
>gi|254976344|ref|ZP_05272816.1| putative radical SAM family protein [Clostridium difficile
QCD-66c26]
gi|255093729|ref|ZP_05323207.1| putative radical SAM family protein [Clostridium difficile CIP
107932]
gi|255101920|ref|ZP_05330897.1| putative radical SAM family protein [Clostridium difficile
QCD-63q42]
gi|255307789|ref|ZP_05351960.1| putative radical SAM family protein [Clostridium difficile ATCC
43255]
gi|255315481|ref|ZP_05357064.1| putative radical SAM family protein [Clostridium difficile
QCD-76w55]
gi|255518144|ref|ZP_05385820.1| putative radical SAM family protein [Clostridium difficile
QCD-97b34]
gi|255651260|ref|ZP_05398162.1| putative radical SAM family protein [Clostridium difficile
QCD-37x79]
gi|260684324|ref|YP_003215609.1| putative radical SAM family protein [Clostridium difficile CD196]
gi|260687983|ref|YP_003219117.1| putative radical SAM family protein [Clostridium difficile R20291]
gi|306521102|ref|ZP_07407449.1| putative radical SAM family protein [Clostridium difficile
QCD-32g58]
gi|260210487|emb|CBA64969.1| putative radical SAM family protein [Clostridium difficile CD196]
gi|260214000|emb|CBE06119.1| putative radical SAM family protein [Clostridium difficile R20291]
Length = 459
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 80 DNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
++ + VHR P + L + H C + C++CF + + ++S + +AA+ Y
Sbjct: 77 EDTYQYHPSFVHREPVVKALCLNVAHDCNLKCKYCFAAQGDFGGEKELMSFEVGKAAIDY 136
Query: 138 IQEKSQIW---EVIFTGGDPLI 156
+ S E+ F GG+PL+
Sbjct: 137 LIANSGSRKNLEIDFFGGEPLM 158
>gi|71907086|ref|YP_284673.1| nitrogenase cofactor biosynthesis protein NifB [Dechloromonas
aromatica RCB]
gi|71846707|gb|AAZ46203.1| Nitrogenase cofactor biosynthesis protein NifB [Dechloromonas
aromatica RCB]
Length = 500
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 58/187 (31%), Gaps = 28/187 (14%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H Y R+ + + C + C +C R+ G + + + LA E Q+
Sbjct: 52 HHYFARMHVAVAPACNIQCNYCNRKYDCSNESRPGVVSELLTPDQAIKKVLAVAAEIPQM 111
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVP------------IVDPQ 190
+ G GDPL + + + L +++ + +D
Sbjct: 112 TVLGIAGPGDPLANPGRTFE-TFEQLSARAPDIKLC-VSTNGLNLPQYVDRIAQHNIDHV 169
Query: 191 RINPELIQ------CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
I + E+ + L + GI++ SVL+
Sbjct: 170 TITINCVDPEVGAKIYPWIYWENKRITGVEGARILIEQQQKGLQMLTDRGILVKVNSVLI 229
Query: 245 KGINDDP 251
G+ND+
Sbjct: 230 PGVNDEH 236
>gi|319791713|ref|YP_004153353.1| tRNA-i(6)a37 thiotransferase enzyme miab [Variovorax paradoxus EPS]
gi|315594176|gb|ADU35242.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Variovorax paradoxus EPS]
Length = 455
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 55/182 (30%), Gaps = 43/182 (23%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
+ ++ C YC +C V ++ + L I + E+ G
Sbjct: 145 TAFVSIMEGCSKYCSYC-----VVPYTRGEEVNRPLDDVLVEIAGLADQGVREITLLGQN 199
Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
GD ++ L +++ + I ++ +R+ + P P LI+ +
Sbjct: 200 VNAYRGKMGDTAEIADFAL--LIEYVAEIPGIERIRYTTS----HPNEFTPRLIEAYAKV 253
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+ + H + P R+ + +G + +R
Sbjct: 254 PQ---LVSHLHLP------VQHGSDRIL---------MAMKRGYT--AMEYKSTVRKLRA 293
Query: 264 LR 265
+R
Sbjct: 294 IR 295
>gi|229132578|ref|ZP_04261427.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST196]
gi|228650924|gb|EEL06910.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST196]
Length = 307
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 19/154 (12%)
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
F R+ +LS + E I + ++ TGG+PL+ L K+++ L I
Sbjct: 6 FGRDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGEPLLRKD--LPKLIQRLNEI 62
Query: 173 KHVQILRFHSRVPIVDP----------QRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
V+ + + ++ R+ L L E + N +
Sbjct: 63 DGVEDIGLTTNGSLLKKFASDLYKAGLSRVTVSL-DSLNEERF-----SYLNGNRSKVKT 116
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+A I A AG+ + V+ KG N+ +
Sbjct: 117 VLAGIQAAAEAGMKIKMNMVVQKGKNEQDIVQMA 150
>gi|116750480|ref|YP_847167.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116699544|gb|ABK18732.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 377
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 61/197 (30%), Gaps = 24/197 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ ++ C + C C R + L + + L I + +I TGG+PL+
Sbjct: 30 VAWEVTRTCNLACVHC-RAAALDRPYENELKTDECFRLLDDIGTVASPI-IILTGGEPLL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA------ 210
+ + + + R V+ + PE + + E G
Sbjct: 88 RPD------IFEIAAYGNAKGFRMT---MAVNGTLLTPETAKRMIETGIQRISVSLDGAD 138
Query: 211 --IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
H + + A+ I+ AG+ + + + D+ + +L V L
Sbjct: 139 ASSHDAFRRVHGAFDGAMRGIAYAREAGLPFQVNTTITQQNLDEFPAIHDLT---VSLGA 195
Query: 267 KPYYLHHPDLAAGTSHF 283
+++
Sbjct: 196 AAHHIFLLVPMGRGKDL 212
>gi|116054237|ref|YP_788681.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa
UCBPP-PA14]
gi|313111857|ref|ZP_07797650.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa 39016]
gi|115589458|gb|ABJ15473.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa
UCBPP-PA14]
gi|310884152|gb|EFQ42746.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa 39016]
Length = 387
Score = 38.7 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 34/232 (14%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ ++ +P + R P ++ LL C + C+ C+ S L + + +
Sbjct: 11 LAEDAPAPRRAGGRRAP-VVIWNLLRRCNLTCKHCY-STSADSDFRGELETAEILRGIDD 68
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINP 194
++ + + +I +GG+PL+ L ++ R + S ++D QR+
Sbjct: 69 LRA-AGVRVLILSGGEPLMHPD--LFEIAAHARQAG--MFVALSSNGTLIDEGNIQRVAE 123
Query: 195 ELIQC-------LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
L+E + A+AA+ A I + ++ L +
Sbjct: 124 ARFDYVGISLDGLRETHDR------FRQKQGSFDAALAAMRLCREADIRVGMRTTLTEEN 177
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAG--------TSHFRLTIEEGQ 291
L +LMR ++ +YL H + + H R
Sbjct: 178 AAQLPALLDLMREL---DVQKFYLSHLNYSGRGRRSRALDAHHRRTREALAL 226
>gi|300311209|ref|YP_003775301.1| molybdenum cofactor biosynthesis protein A [Herbaspirillum
seropedicae SmR1]
gi|300073994|gb|ADJ63393.1| molybdenum cofactor biosynthesis protein A [Herbaspirillum
seropedicae SmR1]
Length = 393
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 15/124 (12%)
Query: 55 PI--ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
PI RQ P E + P + ++ +H + + C C +C
Sbjct: 29 PIVDYRQAFPASEAGRLAPMAVQPTGWLSDSLGRP--LHDLR----ISVTDRCNFRCVYC 82
Query: 113 FRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH-KRLQKVL 166
+++ Q +L+ ++ A + ++ TGG+PL+ + + L +L
Sbjct: 83 MPKDVFDKQYQFLPHSDLLTFEELTRVAAQFVAH-GVRKIRLTGGEPLLRKNIETLIGML 141
Query: 167 KTLR 170
LR
Sbjct: 142 AALR 145
>gi|294673495|ref|YP_003574111.1| 30S ribosomal protein S12 methylthiotransferase RimO [Prevotella
ruminicola 23]
gi|294473743|gb|ADE83132.1| ribosomal protein S12 methylthiotransferase RimO [Prevotella
ruminicola 23]
Length = 437
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 72/215 (33%), Gaps = 33/215 (15%)
Query: 81 NNHSPLKGIVHRYPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
++ +G H R +K+ C +C +C + G + ++ + Y+
Sbjct: 119 EEYNACEGKRHITTPRHYAYIKISEGCDRHCAYCAIPLITGKHQSR--PMQEILDEVRYL 176
Query: 139 QE------KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
E+ + G D + + + ++++ + I V+ +R H P P
Sbjct: 177 VSQGTKEFNVIAQELTYYGVD--LDGKQHIAELIEQMADIPGVEWIRLHYAYPTHFPW-- 232
Query: 193 NPELIQCLKEAGKPV-YIAIHANHP---------YEFS-EEAIAAISRLANAGIILLSQS 241
+L++ ++E Y+ I H + +E + R+ + ++
Sbjct: 233 --DLLRVIREKQNVCKYLDIALQHVSDNMLSRMRRHVTKDETYELVRRMREEVPGIHIRT 290
Query: 242 VLLKGI-NDDPEILANL-----MRTFVELRIKPYY 270
L+ G + E L F + Y
Sbjct: 291 TLMVGFPGETDEDFEELKAFVKWARFERMGAFSYS 325
>gi|53714978|ref|YP_100970.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides fragilis YCH46]
gi|52217843|dbj|BAD50436.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides fragilis YCH46]
Length = 152
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRIL-------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
I++ YP+ I+ L C C C E Q G LS + + I
Sbjct: 2 NILYTYPETIVDGEGIRYSIYLAGCRHGCPGCHNPESWNPQAGEELSGGRLASIIREINS 61
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP L
Sbjct: 62 NPLLDGVTFSGGDPFYDPEAFL 83
>gi|257456566|ref|ZP_05621761.1| molybdenum cofactor biosynthesis protein A [Treponema vincentii
ATCC 35580]
gi|257445986|gb|EEV21034.1| molybdenum cofactor biosynthesis protein A [Treponema vincentii
ATCC 35580]
Length = 319
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D I + + C CR+C + V +L ++ + I + TGG+
Sbjct: 10 DYIRISVTDRCNFRCRYCMPVQGVDYVAHDQILRFEEILRISRLLPR-LGIKHIKITGGE 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
PL+ K + ++K L+ ++ ++ + +
Sbjct: 69 PLVR--KGICALIKDLKALEGIEQVTLTTNG 97
>gi|256822556|ref|YP_003146519.1| molybdenum cofactor biosynthesis protein A [Kangiella koreensis DSM
16069]
gi|256796095|gb|ACV26751.1| molybdenum cofactor biosynthesis protein A [Kangiella koreensis DSM
16069]
Length = 332
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C +M K +L ++ + + ++ TGG+PL+
Sbjct: 22 VTDRCNFRCVYCMAEDMTFLPKQRLLCYEELTQISQAF-TELGVNKIRLTGGEPLVRHD- 79
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ K+ L + ++ L + ++
Sbjct: 80 -IIKLTSNLGQLDGLKNLAITTNGSMLTK 107
>gi|218438303|ref|YP_002376632.1| radical SAM protein [Cyanothece sp. PCC 7424]
gi|218171031|gb|ACK69764.1| Radical SAM domain protein [Cyanothece sp. PCC 7424]
Length = 210
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L C VYC +C ++E +++ S A I VI TGG+PL+
Sbjct: 36 AFFIRLGGCDVYCPWCDQKESWNAKRHPHQSVDTLAQAAKM--ANPAI--VIITGGEPLM 91
Query: 157 LSHKRLQKVLKTLRYIKHVQI 177
L LK L H++
Sbjct: 92 HDLDPLTTELKKLGLQVHLET 112
>gi|154253144|ref|YP_001413968.1| molybdenum cofactor biosynthesis protein A [Parvibaculum
lavamentivorans DS-1]
gi|154157094|gb|ABS64311.1| molybdenum cofactor biosynthesis protein A [Parvibaculum
lavamentivorans DS-1]
Length = 345
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 59/158 (37%), Gaps = 15/158 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 32 VTDRCDFRCVYCMSEHMNFLPKPELLTLEELDRVCSAFIA-KGVRKLRLTGGEPLVRRDV 90
Query: 161 R-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY-- 217
L + L + L + + R +L + + +++ +P
Sbjct: 91 MTLIRSLGRHLESGALDELTLTTNGSQL--ARYADDLH---AAGIRRINVSLDTLNPDLF 145
Query: 218 -EFS-----EEAIAAISRLANAGIILLSQSVLLKGIND 249
E + + + I+ AG+ + +V LKG+N+
Sbjct: 146 AEITRWGRLPQVLDGIAAAKRAGLQIKINTVALKGVNE 183
>gi|91975543|ref|YP_568202.1| nitrogenase cofactor biosynthesis protein NifB [Rhodopseudomonas
palustris BisB5]
gi|91681999|gb|ABE38301.1| nitrogenase cofactor biosynthesis protein NifB [Rhodopseudomonas
palustris BisB5]
Length = 519
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 24/189 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + +A Q+
Sbjct: 70 HHHFARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLSPEQAARKVIAVASTIPQM 129
Query: 145 WEVIFTG-GDPL---------------ILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIV 187
+ G GDPL +L L HV+ + +
Sbjct: 130 TVLGVAGPGDPLANPAKTFKTFELVSETAPDIKLCLSTNGLTLPDHVERIVAMKVDHVTI 189
Query: 188 DPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
I+PE+ Q SE + + L GI++ SV++ G
Sbjct: 190 TINMIDPEIGAQIYPWIFYDHRRITGVEASKILSERQLLGLEMLTARGILVKVNSVMIPG 249
Query: 247 INDDPEILA 255
IND I
Sbjct: 250 INDRHLIEV 258
>gi|296116145|ref|ZP_06834763.1| molybdenum cofactor biosynthesis protein A [Gluconacetobacter
hansenii ATCC 23769]
gi|295977251|gb|EFG84011.1| molybdenum cofactor biosynthesis protein A [Gluconacetobacter
hansenii ATCC 23769]
Length = 342
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C +M K +LS ++ E A + + + TGG+PL+
Sbjct: 24 VTDRCDMRCLYCMAEDMTFLPKPEILSYEELERICAAFI-HNGVRRIRVTGGEPLVRRD 81
>gi|226365892|ref|YP_002783675.1| molybdenum cofactor biosynthesis protein A [Rhodococcus opacus B4]
gi|254811546|sp|C1B1N5|MOAA_RHOOB RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|226244382|dbj|BAH54730.1| molybdenum cofactor biosynthesis protein MoaA [Rhodococcus opacus
B4]
Length = 351
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +L++ + + + + EV FTGG+PL+
Sbjct: 41 ITEKCSLRCTYCMPEEGLPAIPAQNLLTASEIVRLVDIAVHRLGVREVRFTGGEPLMRVD 100
Query: 160 KRLQKVLK 167
L++++
Sbjct: 101 --LEQMIA 106
>gi|225619004|ref|YP_002720230.1| thiamine biosynthesis protein ThiH [Brachyspira hyodysenteriae WA1]
gi|225213823|gb|ACN82557.1| thiamine biosynthesis protein [Brachyspira hyodysenteriae WA1]
Length = 474
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 63/179 (35%), Gaps = 17/179 (9%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLS 127
+ +D + K + Y RI+L + C C +C L+
Sbjct: 63 CDDKDAENEMFEIAKKIKLEIYGKRIVLFAPLYLSNYCINGCVYCPYHAKNKHIARKQLT 122
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSR 183
+ A + +Q+ + TG DP S + L + +KT+ IKH ++ + +
Sbjct: 123 QDEIRAEVIALQDMGHKRLALETGEDPDYASMEYLLESIKTIYSIKHKNGAIRRVNVNIA 182
Query: 184 VPIVDPQR-------INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
V+ + L Q + KP Y +H + P E A+ R GI
Sbjct: 183 ATTVENYKKLKDAGIGTYVLFQ--ETYHKPTYEKVHPSGPKSNYEYHTEAMDRAMEGGI 239
>gi|78778109|ref|YP_394424.1| molybdenum cofactor biosynthesis protein A [Sulfurimonas
denitrificans DSM 1251]
gi|123727517|sp|Q30P92|MOAA_SULDN RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|78498649|gb|ABB45189.1| GTP cyclohydrolase subunit MoaA [Sulfurimonas denitrificans DSM
1251]
Length = 321
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 32/99 (32%), Gaps = 5/99 (5%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
++ Y + + C C++C + L + + + I
Sbjct: 2 LIDSYDRVVDYLRISVTERCNFRCQYCMPEKPFSWVPKENLLTFEELFLFVKVAIDEGIR 61
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
++ TGG+PL+ L K +K + L +
Sbjct: 62 KIRITGGEPLLRED--LDKFIKMIFDYAPDIDLAMTTNA 98
>gi|7715074|gb|AAF67855.1|AF214021_1 molybdenum cofactor synthesis-step 1 protein A splice type I
[Drosophila melanogaster]
Length = 385
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y L C + C +C E V K +L++++ I + +
Sbjct: 66 GRHHTYLRISL---TERCNLRCDYCMPAEGVPLQPKNKLLTTEEILRLAR-IFVDQGVRK 121
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ TGG+P + + +++ ++ + ++ + +
Sbjct: 122 IRLTGGEPTVRRD--IVEIVAQMKALPELEQIGITTNG 157
>gi|315497432|ref|YP_004086236.1| molybdenum cofactor biosynthesis protein a [Asticcacaulis
excentricus CB 48]
gi|315415444|gb|ADU12085.1| molybdenum cofactor biosynthesis protein A [Asticcacaulis
excentricus CB 48]
Length = 337
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Query: 87 KGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
++ Y RI + C + C +C + +LS ++ E ++
Sbjct: 5 PALIDAYHRRISYVRISVTDRCDLRCTYCMSERQTFLPRENLLSFEELERLSLFLI-DQG 63
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ + TGG+PL+ + + LK L H
Sbjct: 64 VTRLRITGGEPLVR--RGILDFLKRLGAQVH 92
>gi|296242351|ref|YP_003649838.1| radical SAM domain-containing protein [Thermosphaera aggregans DSM
11486]
gi|296094935|gb|ADG90886.1| Radical SAM domain protein [Thermosphaera aggregans DSM 11486]
Length = 306
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C FC R + G + VL+ D LAY+ K I TGG+PL+
Sbjct: 15 IVVTMRCNYNCIFCHREGLTGLDRAEVLTPDDY-RYLAYVSRKLGIVYFKITGGEPLLRR 73
Query: 159 H 159
Sbjct: 74 D 74
>gi|189501278|ref|YP_001960748.1| molybdenum cofactor biosynthesis protein A [Chlorobium
phaeobacteroides BS1]
gi|189496719|gb|ACE05267.1| molybdenum cofactor biosynthesis protein A [Chlorobium
phaeobacteroides BS1]
Length = 332
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+ R+ I + C + C +C R + + + + + + + + E I
Sbjct: 11 LTDRFQRTIDYTRISVTSDCNLRCFYCKRESPGIPTPDDQQMKTGEIKTLIELLAEM-GI 69
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
++ FTGG+PL+ + +++ + ++ + + +++
Sbjct: 70 RKIRFTGGEPLLRPD--IVDLVQIAKSTTGIETVSLTTNGTLLEKH 113
>gi|312116333|ref|YP_004013929.1| molybdenum cofactor biosynthesis protein A [Rhodomicrobium
vannielii ATCC 17100]
gi|311221462|gb|ADP72830.1| molybdenum cofactor biosynthesis protein A [Rhodomicrobium
vannielii ATCC 17100]
Length = 345
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C M K +L+ ++ + A + ++ TGG+PL+ +
Sbjct: 33 VTDRCDFRCVYCMPDRMQFLPKAELLTLEELDRLCAGFIA-KGVRKIRLTGGEPLMRRNL 91
Query: 161 RL 162
L
Sbjct: 92 LL 93
>gi|253566416|ref|ZP_04843869.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265767276|ref|ZP_06094942.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|251944588|gb|EES85063.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263252581|gb|EEZ24093.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301165287|emb|CBW24858.1| putative radical SAM-family protein [Bacteroides fragilis 638R]
Length = 361
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 70/233 (30%), Gaps = 51/233 (21%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV--IFTGG 152
++ + C + C+ C + + + D + I EV I TGG
Sbjct: 33 RQLFWECTLQCNLACKHCGSDCR-KMSEQKDMPAADFLQVVDSITPHVNPNEVNIIITGG 91
Query: 153 DPLILSHKRLQKVLKTL--RYIK--------HVQILRFHSRVPIVDPQRINPEL------ 196
+PL+ L++V L + ++ R S + + L
Sbjct: 92 EPLMRDD--LEEVGMALYRKGYPWGIVSNGLYLTRERLDSLMAAGLHA-VTISLDGFAEE 148
Query: 197 IQCLK----EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L+ K + H E + + + ++R +
Sbjct: 149 HNWLRGNPDSYEKALEAIKMLVHEPELTWDVVTCVNR-------------------KNYS 189
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSH---FRLTIEE---GQKIVASLKE 299
L L + ++ + + ++ F+LT EE + + +++
Sbjct: 190 YLEELKAYLYTIGVRNWRIFTIFPVGRAANHLEFQLTDEEFTGVLEFIKKVRK 242
>gi|53715771|ref|YP_101763.1| putative heme biosynthesis protein [Bacteroides fragilis YCH46]
gi|60683702|ref|YP_213846.1| putative radical SAM-family protein [Bacteroides fragilis NCTC
9343]
gi|52218636|dbj|BAD51229.1| putative heme biosynthesis protein [Bacteroides fragilis YCH46]
gi|60495136|emb|CAH09957.1| putative radical SAM-family protein [Bacteroides fragilis NCTC
9343]
Length = 361
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 70/233 (30%), Gaps = 51/233 (21%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV--IFTGG 152
++ + C + C+ C + + + D + I EV I TGG
Sbjct: 33 RQLFWECTLQCNLACKHCGSDCR-KMSEQKDMPAADFLQVVDSITPHVNPNEVNIIITGG 91
Query: 153 DPLILSHKRLQKVLKTL--RYIK--------HVQILRFHSRVPIVDPQRINPEL------ 196
+PL+ L++V L + ++ R S + + L
Sbjct: 92 EPLMRDD--LEEVGMALYRKGYPWGIVSNGLYLTRERLDSLMAAGLHA-VTISLDGFAEE 148
Query: 197 IQCLK----EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L+ K + H E + + + ++R +
Sbjct: 149 HNWLRGNPDSYEKALEAIKMLVHEPELTWDVVTCVNR-------------------KNYS 189
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSH---FRLTIEE---GQKIVASLKE 299
L L + ++ + + ++ F+LT EE + + +++
Sbjct: 190 YLEELKAYLYTIGVRNWRIFTIFPVGRAANHPEFQLTDEEFTGVLEFIKKVRK 242
>gi|6685644|sp|O27593|MOAA_METTH RecName: Full=Probable molybdenum cofactor biosynthesis protein A
Length = 305
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C V C +C R M S+ LS+ D E + + ++ +GG+PLI
Sbjct: 18 ITGRCNVNCIYCHRDGMTSSRGE--LSAADIEKLCR-VASDLGVGKIRLSGGEPLIRDD- 73
Query: 161 RLQKVLKTLRYI 172
+ ++++ + I
Sbjct: 74 -IVEIVERINNI 84
>gi|290956407|ref|YP_003487589.1| hypothetical protein SCAB_19011 [Streptomyces scabiei 87.22]
gi|260645933|emb|CBG69024.1| putative hypothetical protein [Streptomyces scabiei 87.22]
Length = 801
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 18/117 (15%)
Query: 98 LLKLLHVCPVYCRFCFR--------REMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVI 148
++K+ C + C C+ R G+ + E + V+
Sbjct: 12 VIKVHSRCDLACDHCYVYQHADQSWRGRPGTMSEETF-RRTAERIAEHAAAHRLPRVHVV 70
Query: 149 FTGGDPLILSHKRLQKVLKTLR-YIKHV--QILRFHSRVPIVDPQRINPELIQCLKE 202
GG+PL+ +RL+ + LR + V LR + R++ L E
Sbjct: 71 LHGGEPLLAGRERLRGYARALRSALDGVAALDLRMQTNGL-----RLDDAFCAMLVE 122
>gi|308233982|ref|ZP_07664719.1| RNA modification enzyme, MiaB family protein [Atopobium vaginae DSM
15829]
gi|328944009|ref|ZP_08241474.1| MiaB family RNA modification enzyme [Atopobium vaginae DSM 15829]
gi|327491978|gb|EGF23752.1| MiaB family RNA modification enzyme [Atopobium vaginae DSM 15829]
Length = 421
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 21/147 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTG 151
R +K+ C C FC + G + E+ LA ++ EV+ TG
Sbjct: 134 RMRPGIKVQDGCNNRCSFCIVWKARGPARSVSC-----ESVLASVRSSIAHGAREVVLTG 188
Query: 152 ---GDP---LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GD S RL +L+ + V+ +R S ++P + EL++ + ++
Sbjct: 189 INLGDFREIYHGSRVRLPDLLQLILDETPVERVRLSS----IEPPDVTDELLRVMAQSQG 244
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLAN 232
+ +H A + R+
Sbjct: 245 RIAPFLHIC----LQSGCEATLKRMRR 267
>gi|326204016|ref|ZP_08193877.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
gi|325985783|gb|EGD46618.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
Length = 456
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + C CR+C+ + + L+ ++ + ++++++TGG+
Sbjct: 114 PKTISFHVTSTCNKECRYCYLDAKRENLEKDALTFEEVVRMIDE-AAAIGVYKILYTGGE 172
Query: 154 PLILSH 159
P +
Sbjct: 173 PFLRKD 178
>gi|119504325|ref|ZP_01626405.1| pyrroloquinoline quinone biosynthesis protein PqqE [marine gamma
proteobacterium HTCC2080]
gi|119459833|gb|EAW40928.1| pyrroloquinoline quinone biosynthesis protein PqqE [marine gamma
proteobacterium HTCC2080]
Length = 375
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 67/176 (38%), Gaps = 23/176 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L +L + CP+ C +C + + GT LS++D L ++ + F+GG+PL+
Sbjct: 13 LLAELTYRCPLQCPYCS-NPVELASAGTELSTEDWFRVLQQARKMGAAQ-LGFSGGEPLV 70
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIH 212
+ L + L + ++ + + + L+EAG +
Sbjct: 71 RQDLELLVAEARRLGFYSNLITSGVG----------LTSDRVGALREAGLDHIQISFQST 120
Query: 213 ANHPYEFSEEAIAAISR-------LANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ E + A + + +AG ++ VL + D E + +L
Sbjct: 121 DSDISELLSGSRKAFAHKLAMAEAVKSAGYPMVLNFVLHRHNIDQIEQIIDLSHEL 176
>gi|91203064|emb|CAJ72703.1| similar to moaA/nirJ/pqqE cofactor biosynthesis protein [Candidatus
Kuenenia stuttgartiensis]
Length = 408
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 22/186 (11%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ + C + C C+ + LS+K+ +A L I E ++F+GG+PL
Sbjct: 41 VVVWNVGQRCNLKCVHCYSQSKDIEYPNE-LSTKEAKAMLDDIAEYGAPV-ILFSGGEPL 98
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L ++++ + + + I E LK+ G Y+ I +
Sbjct: 99 MRPD--LLELIEYAKA--QGLRAVISTNGTL-----ITKEKADELKKFGLS-YVGISLDG 148
Query: 216 PYEFS----------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
E + + AI I AGI + + + K D + +L+ R
Sbjct: 149 LRETNDRFRGIPGAFDLAIEGIRNCMAAGIKVGLRFTINKRNAHDIPGIFHLIEKENIPR 208
Query: 266 IKPYYL 271
+ Y+L
Sbjct: 209 VCFYHL 214
>gi|37526620|ref|NP_929964.1| hypothetical protein plu2730 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786052|emb|CAE15104.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 354
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-S 142
G +YP+ + + C C+ C LS + + +A+ +
Sbjct: 3 CFPPGYWEQYPNTATVITTYTCNAACKECCFECNP--SVKARLSLDEIKQFIAHSKANFP 60
Query: 143 QIWEVIFTGGDPLILSHKRLQKV 165
+ V+F+GG+ +L ++ +
Sbjct: 61 GLKLVVFSGGECFLLGKDLIEAI 83
>gi|15595708|ref|NP_249202.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa PAO1]
gi|107099497|ref|ZP_01363415.1| hypothetical protein PaerPA_01000509 [Pseudomonas aeruginosa PACS2]
gi|9946376|gb|AAG03900.1|AE004488_4 heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa PAO1]
gi|1783281|dbj|BAA12681.1| NirJ [Pseudomonas aeruginosa]
Length = 387
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 78/230 (33%), Gaps = 34/230 (14%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++ +P + R P ++ LL C + C+ C+ S L + + + ++
Sbjct: 13 EDAPTPRRAGGRRAP-VVIWNLLRRCNLTCKHCY-STSADSDFRGELETAEILRGIDDLR 70
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPEL 196
+ + +I +GG+PL+ L ++ R + S ++D QR+
Sbjct: 71 A-AGVRVLILSGGEPLMHPD--LFEIAAHARQAG--MFVALSSNGTLIDEGNIQRVAEAR 125
Query: 197 IQC-------LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
L+E + A+AA+ A I + ++ L +
Sbjct: 126 FDYVGISLDGLRETHDR------FRQKQGSFDAALAAMRLCREADIRVGMRTTLTEENAA 179
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAG--------TSHFRLTIEEGQ 291
L +LMR ++ +YL H + + H R
Sbjct: 180 QLPALLDLMREL---DVQKFYLSHLNYSGRGRRSRALDAHHRRTREALAL 226
>gi|298207940|ref|YP_003716119.1| hypothetical protein CA2559_06800 [Croceibacter atlanticus
HTCC2559]
gi|83850581|gb|EAP88449.1| hypothetical protein CA2559_06800 [Croceibacter atlanticus
HTCC2559]
Length = 210
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 63 QKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
KEE++ + E + P+ + ++ H+ + C V C +C +E ++
Sbjct: 2 TKEEISQLVEEGKMLPLMEEFYTIQGEGYHK-GTAAYFIRIGGCDVGCHWCDVKESWDAE 60
Query: 122 KGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
K +++ A+ Y + ++ TGG+PL L ++LK H++
Sbjct: 61 KHPPTATERIVSEAVKYSKT------IVVTGGEPLTWDMTLLTQMLKAEGAQTHIET 111
>gi|237752883|ref|ZP_04583363.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC
BAA-430]
gi|229375150|gb|EEO25241.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC
BAA-430]
Length = 366
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 14/127 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G S + + + + E I TG +
Sbjct: 133 KSRAFIKIQEGCDFACSYCIIPSVRGK--ARSFSQEKILKQVESLAQ-KGFSEFIITGTN 189
Query: 154 PLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ S + + ++++L I ++ LR S ++P +I+ + L+ +
Sbjct: 190 --MGSWGKDFGLNIATLVESLCEIPLLKRLRIGS----LEPSQIDTHFLSVLENPKIERH 243
Query: 209 IAIHANH 215
+ I H
Sbjct: 244 LHIALQH 250
>gi|332161002|ref|YP_004297579.1| molybdenum cofactor biosynthesis protein A [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318604874|emb|CBY26372.1| molybdenum cofactor biosynthesis protein MoaA [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665232|gb|ADZ41876.1| molybdenum cofactor biosynthesis protein A [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330863981|emb|CBX74063.1| molybdenum cofactor biosynthesis protein A [Yersinia enterocolitica
W22703]
Length = 326
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + LS + ++ TGG+P +
Sbjct: 19 ITDVCNFRCTYCLPDGYRPDGVKSFLSLDEISRVSRAF-ALLGTEKIRLTGGEPSMRRD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ T+R ++ L +
Sbjct: 77 -FTDIIATIRQNPAIRTLAVTTNG 99
>gi|301163425|emb|CBW22976.1| putative oxidoreductase [Bacteroides fragilis 638R]
Length = 432
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 21/144 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + + L ++++ + I V+ +R H P EL + ++E Y+
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPKELFRVMRERDNVCKYM 249
Query: 210 AIHANHPYEFSEEAIAAISRLANA 233
I H + + R+
Sbjct: 250 DIALQHI------SDNMLQRMRRH 267
>gi|291547922|emb|CBL21030.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Ruminococcus sp.
SR1/5]
Length = 231
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDP 154
I L L+ C + C +CF E G +S + A+ Y+ E S +V+ T GG+P
Sbjct: 99 ITLMLVQGCNLACSYCFGDEGSYCDSGK-MSKETAFKAIDYLFEHSDADKVLITFFGGEP 157
Query: 155 LILSH 159
L+
Sbjct: 158 LLAVD 162
>gi|238759763|ref|ZP_04620921.1| Molybdenum cofactor biosynthesis protein A [Yersinia aldovae ATCC
35236]
gi|238701995|gb|EEP94554.1| Molybdenum cofactor biosynthesis protein A [Yersinia aldovae ATCC
35236]
Length = 326
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + LS + ++ TGG+P +
Sbjct: 19 VTDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRVSRAF-ALLGTEKIRLTGGEPSMRRD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ T+R ++ L +
Sbjct: 77 -FTDIIATIRQNPAIRTLAVTTNG 99
>gi|123443113|ref|YP_001007087.1| molybdenum cofactor biosynthesis protein A [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122090074|emb|CAL12937.1| molybdenum cofactor biosynthesis protein A [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 326
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + LS + ++ TGG+P +
Sbjct: 19 ITDVCNFRCTYCLPDGYRPDGVKSFLSLDEISRVSRAF-ALLGTEKIRLTGGEPSMRRD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ T+R ++ L +
Sbjct: 77 -FTDIIATIRQNPAIRTLAVTTNG 99
>gi|189423541|ref|YP_001950718.1| radical SAM protein [Geobacter lovleyi SZ]
gi|189419800|gb|ACD94198.1| Radical SAM domain protein [Geobacter lovleyi SZ]
Length = 828
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 86/271 (31%), Gaps = 53/271 (19%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ R+F+P E D SP+ + DR+ +++ C CRFC
Sbjct: 224 VRRRFLPDIE------------AADFPDSPIIPFLKTIHDRVAIEVARGCTRGCRFCQAG 271
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH---KRLQKVLKTLRYI 172
+ + S + + + + E+ L LS + +L+ L
Sbjct: 272 YIYRPLRER--SPQRINELIETSLKNTGYEEISL-----LSLSTGDYSCIAPLLQELMA- 323
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
+H Q R +P + + PELI +++ K E E + R+ N
Sbjct: 324 RHAQ-GRVAVSLPSLRVGTLTPELIDEIRKVRK-----TGFTLAPEAGSE---RMRRVIN 374
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
GI S+ LL G + L++ Y + E ++
Sbjct: 375 KGI---SEQDLLDGAYNIFAAGWRLIK---------LYFMMGLPTETRDDLQAIPELARQ 422
Query: 293 IVASLKEKISG------LCQPFYILDLPGGY 317
+ + SG + ++ P
Sbjct: 423 VKNQARR--SGGQGEVNVAVSTFVPK-PHTP 450
>gi|320183045|gb|EFW57910.1| tRNA-i(6)A37 methylthiotransferase [Shigella flexneri CDC 796-83]
Length = 474
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 34/217 (15%), Positives = 65/217 (29%), Gaps = 30/217 (13%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---- 151
+ ++ C YC +C G + S D +A + + EV G
Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAA-QGVREVNLLGQNVN 204
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ------RINPELIQCL-- 200
G+ S +L+ + I + +RF + PI R PEL+ L
Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264
Query: 201 ---KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ + + + + E+ A I +L A + S + G +
Sbjct: 265 PVQSGSDRILNLMGRTHTALEY----KAIIRKLRAARPDIQISSDFIVGFPSETTEDFEK 320
Query: 258 MRTF---VELRIKPYYLHHPDLAAGTSHF--RLTIEE 289
V + ++ + + EE
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEE 357
>gi|303237126|ref|ZP_07323696.1| MiaB-like protein [Prevotella disiens FB035-09AN]
gi|302482513|gb|EFL45538.1| MiaB-like protein [Prevotella disiens FB035-09AN]
Length = 452
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 45/209 (21%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEK 141
+ R LK+ C +C +C G + + S + E A K
Sbjct: 149 TFQPSCSRGNRTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTIQSLVEQAEQA-----AK 203
Query: 142 SQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
E++ TG GD + + ++K L ++ ++ R S ++P I+ ELI+
Sbjct: 204 EGGKEIVLTGVNIGDFGRTTSESFLDLVKALDQVEGIERFRISS----LEPDLIDDELIR 259
Query: 199 C------------------------LKEAGKPVYIAIH-ANHPYEFSEEAIAAISRLANA 233
L + H N E + +A +
Sbjct: 260 YCATSRAFMPHFHIPLQSGSDEVLKLMHRRYDTALFAHKINLIKEITPDAFIGVD----- 314
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFV 262
+++ + + +D L++L T +
Sbjct: 315 -VMVGCRGEEPQYFDDCYNFLSSLPITQL 342
>gi|295702571|ref|YP_003595646.1| hypothetical protein BMD_0385 [Bacillus megaterium DSM 319]
gi|294800230|gb|ADF37296.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 372
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 54/172 (31%), Gaps = 23/172 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 31 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPLDLILKRLDEI---PTLRALSITGGEP-M 86
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
+S ++ + L H + +R +IN L L + P +H +
Sbjct: 87 MSLSSVKNYVVPLLKYAHERGVR----------TQINSNLTLDLARYEQIIPYLDVLHIS 136
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
H + + AG ++ + + + + R V+ +
Sbjct: 137 HNW-------GTMDDFVEAGFAMMERKPTYEQRAKYFDRMIENSRALVKAGV 181
>gi|294497200|ref|YP_003560900.1| hypothetical protein BMQ_0384 [Bacillus megaterium QM B1551]
gi|294347137|gb|ADE67466.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 372
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 54/172 (31%), Gaps = 23/172 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 31 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPLDLILKRLDEI---PTLRALSITGGEP-M 86
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
+S ++ + L H + +R +IN L L + P +H +
Sbjct: 87 MSLSSVKNYVVPLLKYAHERGVR----------TQINSNLTLDLARYEQIIPYLDVLHIS 136
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
H + + AG ++ + + + + R V+ +
Sbjct: 137 HNW-------GTMDDFVEAGFAMMERKPTYEQRAKYFDRMIENSRALVKAGV 181
>gi|163814605|ref|ZP_02205994.1| hypothetical protein COPEUT_00756 [Coprococcus eutactus ATCC 27759]
gi|158450240|gb|EDP27235.1| hypothetical protein COPEUT_00756 [Coprococcus eutactus ATCC 27759]
Length = 479
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 8/128 (6%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLS 127
E D + + Y +RI++ + C C +C LS
Sbjct: 66 CEMPDKTAEICDLAEQIKKDFYGNRIVMFAPLYLSNYCVNGCVYCPYHIKNKHIARKKLS 125
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSR 183
+ + +Q+ I G DP + + + + + T+ I+H ++ + +
Sbjct: 126 QDEVRREVIALQDMGHKRLAIEAGEDPQMNPIEYILECIDTIYSIRHKNGAIRRVNVNIA 185
Query: 184 VPIVDPQR 191
V+ R
Sbjct: 186 ATTVENYR 193
>gi|225548076|ref|ZP_03769361.1| hypothetical protein RUMHYD_00055 [Blautia hydrogenotrophica DSM
10507]
gi|225040752|gb|EEG50998.1| hypothetical protein RUMHYD_00055 [Blautia hydrogenotrophica DSM
10507]
Length = 454
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E ++S + + AL ++ S EV F GG+PL
Sbjct: 100 LHIAHDCNLACRYCFAEEGEYHGHRELMSYEVGKQALDFLIANSGSRRNLEVDFFGGEPL 159
Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRFH-SRVPIVDPQRINP 194
++ K ++++++ R + H + RF + + I
Sbjct: 160 -MNWKVVKELVRYGREQEKLHDKNFRFTLTTNGVALNDEIME 200
>gi|167469633|ref|ZP_02334337.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis FV-1]
Length = 212
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + LS + ++ TGG+P +
Sbjct: 19 ITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAF-ALLGTEKIRLTGGEPSMRRD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ T+R ++ L +
Sbjct: 77 -FTDIIATIRQNPAIRTLAVTTNG 99
>gi|110638137|ref|YP_678346.1| 2-methylthioadenine synthetase [Cytophaga hutchinsonii ATCC 33406]
gi|110280818|gb|ABG59004.1| possible 2-methylthioadenine synthetase [Cytophaga hutchinsonii
ATCC 33406]
Length = 438
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 16/131 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C C FC GS + + + I + E++ TG
Sbjct: 140 RTRTFLKVQDGCDYSCSFCTIPLARGSSRSDTI--ANIVKTAKEIAA-KDVKEIVLTGVN 196
Query: 152 -GDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GD I+S ++K L ++ ++ R S ++P + E+I + + +
Sbjct: 197 IGDYGIISGTRTTSFLDLIKELDKVEGIERFRISS----IEPNLLTDEIISFVSTSRR-- 250
Query: 208 YIAIHANHPYE 218
H + P +
Sbjct: 251 -FVPHFHIPLQ 260
>gi|22126899|ref|NP_670322.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis KIM 10]
gi|45440835|ref|NP_992374.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Microtus str. 91001]
gi|108807062|ref|YP_650978.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
Antiqua]
gi|108813002|ref|YP_648769.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
Nepal516]
gi|145599807|ref|YP_001163883.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
Pestoides F]
gi|165924730|ref|ZP_02220562.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. F1991016]
gi|166211503|ref|ZP_02237538.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167423923|ref|ZP_02315676.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|21959935|gb|AAM86573.1|AE013903_10 molybdopterin biosynthesis protein A [Yersinia pestis KIM 10]
gi|45435693|gb|AAS61251.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Microtus str. 91001]
gi|108776650|gb|ABG19169.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Nepal516]
gi|108778975|gb|ABG13033.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Antiqua]
gi|145211503|gb|ABP40910.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Pestoides F]
gi|165923790|gb|EDR40922.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. F1991016]
gi|166207274|gb|EDR51754.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167056772|gb|EDR66535.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Mediaevalis str. K1973002]
Length = 341
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + LS + ++ TGG+P +
Sbjct: 34 ITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAF-ALLGTEKIRLTGGEPSMRRD- 91
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ T+R ++ L +
Sbjct: 92 -FTDIIATIRQNPAIRTLAVTTNG 114
>gi|332158286|ref|YP_004423565.1| molybdenum cofactor biosynthesis protein A [Pyrococcus sp. NA2]
gi|331033749|gb|AEC51561.1| molybdenum cofactor biosynthesis protein A [Pyrococcus sp. NA2]
Length = 306
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 58/161 (36%), Gaps = 26/161 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C + C +C R + +++ + E + I + I +V TGG+P I
Sbjct: 17 LTKECNLSCFYCHREGQ--GEGEREMTADEIERIVK-IASRLGIRKVKLTGGEPTIRKD- 72
Query: 161 RLQKVLKTLRYI-KHVQILRFHSRVPIVDP----------QRINPELIQCLKEAGKPVYI 209
+++ +R I +V L + + R+N L ++ K +
Sbjct: 73 ----IIEIVRKIRPYVVDLSLTTNGTTLYSLAEKLKEAGLDRVNISLDTLDRKKYK---M 125
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + + A + V+++GINDD
Sbjct: 126 ITGFDVLDQVLKGIRKATKLFY----PVKLNMVVMRGINDD 162
>gi|295090758|emb|CBK76865.1| molybdenum cofactor biosynthesis protein A, bacterial [Clostridium
cf. saccharolyticum K10]
Length = 332
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C +E V + +L+ ++ +A I TGG+PL+
Sbjct: 16 VTDRCSLRCRYCMPKEGVPLTAHENILTYEELL-LVAEASVGLGIDRFKITGGEPLLRKD 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRV 184
++ L+ + V+ + +
Sbjct: 75 CP--DFIRRLKALPGVRQVTLTTNG 97
>gi|227825054|ref|ZP_03989886.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226905553|gb|EEH91471.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 442
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 60/179 (33%), Gaps = 27/179 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
+K+ C C +C ++ G + E + ++ + EVI D
Sbjct: 144 TAYVKIAEGCSNRCSYCAIPKIRGPYRSRP-----YEEIVEEVKSLVQQGTREVILVAQD 198
Query: 154 PLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-V 207
RL ++L+ L I + +R P+ + ELI+ + + K
Sbjct: 199 TTQYGIDLYHKLRLSELLRDLNEIPALTWIRI----LYCYPESFSDELIETMAQCKKVCH 254
Query: 208 YIAIHANHP----------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
Y+ + H + E+ +++L N + ++ + G + E
Sbjct: 255 YVDLPLQHASNSLLKTMRRRDTREQVEMLLAKLRNRMPDICLRTTFIVGFPGETEAQFE 313
>gi|320014299|gb|ADV97870.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 326
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + LS + ++ TGG+P +
Sbjct: 19 ITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAF-ALLGTEKIRLTGGEPSMRRD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ T+R ++ L +
Sbjct: 77 -FTDIIATIRQNPAIRTLAVTTNG 99
>gi|325675815|ref|ZP_08155499.1| molybdopterin cofactor biosynthesis protein A [Rhodococcus equi
ATCC 33707]
gi|325553786|gb|EGD23464.1| molybdopterin cofactor biosynthesis protein A [Rhodococcus equi
ATCC 33707]
Length = 359
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 20/181 (11%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +L++ + + + I EV FTGG+PL+
Sbjct: 49 ITEKCSLRCTYCMPAEGLPAIPARDLLTADEIIRLVGVAVHRLGIREVRFTGGEPLLRRD 108
Query: 160 -KRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HANHP 216
+ + L I L + ++ + + + V + H
Sbjct: 109 LEVIVAGCSELVPGIP----LSMTTNAVGLEHRAVGLARAGL---SRVNVSLDTIDRRHF 161
Query: 217 YEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
E + E + I +AG L +VL+ D A+L++ ++ +
Sbjct: 162 AELTRRDRLESVLTGIRAAQDAGLAPLKINAVLMAETLDGA---ADLLQWCLDAGCALRF 218
Query: 271 L 271
+
Sbjct: 219 I 219
>gi|160936896|ref|ZP_02084260.1| hypothetical protein CLOBOL_01785 [Clostridium bolteae ATCC
BAA-613]
gi|158440086|gb|EDP17833.1| hypothetical protein CLOBOL_01785 [Clostridium bolteae ATCC
BAA-613]
Length = 232
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 93 YPDRILL-KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+P R+ C C FC ++GS +D A L + K + V TG
Sbjct: 14 FPGRVAATIFTGGCNFRCPFCHNSGLLGSDAEEYECQEDILAFLE--KRKRVLEGVCITG 71
Query: 152 GDPLILSHKRLQKVLKTLRYI 172
G+P + L++ ++ +R +
Sbjct: 72 GEPTLQPD--LEEFIRKVRSL 90
>gi|153952032|ref|YP_001397419.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. doylei 269.97]
gi|166217243|sp|A7H1N9|MOAA_CAMJD RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|152939478|gb|ABS44219.1| molybdenum cofactor biosynthesis protein [Campylobacter jejuni
subsp. doylei 269.97]
Length = 320
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 8/88 (9%)
Query: 101 LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLIL 157
+ C C +C + K +LS E +++ I ++ TGG+PL+
Sbjct: 17 VTQRCNFRCLYCMPKIPFDYQPKENLLS---FEELFLFVKATIDEGIEKIRITGGEPLLR 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L +K + K L +
Sbjct: 74 KD--LSIFIKMISDYKSDIDLAITTNGF 99
>gi|15679546|ref|NP_276663.1| molybdenum cofactor biosynthesis protein A [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622671|gb|AAB86024.1| molybdenum cofactor biosynthesis MoaA [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 316
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C V C +C R M S+ LS+ D E + + ++ +GG+PLI
Sbjct: 29 ITGRCNVNCIYCHRDGMTSSRGE--LSAADIEKLCR-VASDLGVGKIRLSGGEPLIRDD- 84
Query: 161 RLQKVLKTLRYI 172
+ ++++ + I
Sbjct: 85 -IVEIVERINNI 95
>gi|51595534|ref|YP_069725.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis IP 32953]
gi|149366845|ref|ZP_01888879.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
CA88-4125]
gi|153948299|ref|YP_001401799.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis IP 31758]
gi|162421199|ref|YP_001605953.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis Angola]
gi|165938348|ref|ZP_02226906.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011582|ref|ZP_02232480.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. E1979001]
gi|167400426|ref|ZP_02305939.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167419585|ref|ZP_02311338.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|170025144|ref|YP_001721649.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis YPIII]
gi|186894590|ref|YP_001871702.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis PB1/+]
gi|218928323|ref|YP_002346198.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis CO92]
gi|229841099|ref|ZP_04461258.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843203|ref|ZP_04463349.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
Orientalis str. India 195]
gi|229894040|ref|ZP_04509226.1| molybdopterin biosynthesis protein A [Yersinia pestis Pestoides A]
gi|229903439|ref|ZP_04518552.1| molybdopterin biosynthesis protein A [Yersinia pestis Nepal516]
gi|24211993|sp|Q8ZGW5|MOAA_YERPE RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|51588816|emb|CAH20430.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis IP 32953]
gi|115346934|emb|CAL19823.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis CO92]
gi|149291219|gb|EDM41294.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
CA88-4125]
gi|152959794|gb|ABS47255.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis IP 31758]
gi|162354014|gb|ABX87962.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis Angola]
gi|165913726|gb|EDR32345.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. IP275]
gi|165989530|gb|EDR41831.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166962326|gb|EDR58347.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167050375|gb|EDR61783.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|169751678|gb|ACA69196.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis YPIII]
gi|186697616|gb|ACC88245.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis PB1/+]
gi|229679209|gb|EEO75312.1| molybdopterin biosynthesis protein A [Yersinia pestis Nepal516]
gi|229689550|gb|EEO81611.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697465|gb|EEO87512.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229703925|gb|EEO90938.1| molybdopterin biosynthesis protein A [Yersinia pestis Pestoides A]
gi|262361197|gb|ACY57918.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
D106004]
gi|262365246|gb|ACY61803.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
D182038]
Length = 326
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + LS + ++ TGG+P +
Sbjct: 19 ITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAF-ALLGTEKIRLTGGEPSMRRD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ T+R ++ L +
Sbjct: 77 -FTDIIATIRQNPAIRTLAVTTNG 99
>gi|282850512|ref|ZP_06259891.1| thiazole biosynthesis protein ThiH [Veillonella parvula ATCC 17745]
gi|282580005|gb|EFB85409.1| thiazole biosynthesis protein ThiH [Veillonella parvula ATCC 17745]
Length = 472
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + ++ VI
Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+G DPL L+ +L++++ I ++
Sbjct: 140 ESGEDPLNNP---LEYILESIKTIYGIKNK 166
>gi|253577824|ref|ZP_04855096.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850142|gb|EES78100.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 482
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 70/204 (34%), Gaps = 32/204 (15%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+K++ + + L I E+I E T A + + N + Q + +
Sbjct: 7 NKSMYNPKSLKAEEFISDEEIRE------------TLAYA---DANKENVALIDQILAKA 51
Query: 65 EELNILPEER---------EDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRF 111
+E L + I + + Y +RI+L + C C +
Sbjct: 52 KECKGLTHREASVLLACPIPEKIQEMYDLAAEIKKEFYGNRIVLFAPLYLSNYCVNGCVY 111
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
C + L+ ++ + +Q+ I G DP+ + + + ++T+
Sbjct: 112 CPYHKKNQHIARKKLTQEEIVKEVTALQDMGHKRLAIEAGEDPINNPIEYILECIQTIYS 171
Query: 172 IKH----VQILRFHSRVPIVDPQR 191
IKH ++ + + V+ R
Sbjct: 172 IKHKNGAIRRVNVNIAATTVENYR 195
>gi|227872087|ref|ZP_03990461.1| [formate-C-acetyltransferase]-activating enzyme [Oribacterium sinus
F0268]
gi|227842068|gb|EEJ52324.1| [formate-C-acetyltransferase]-activating enzyme [Oribacterium sinus
F0268]
Length = 261
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 65/175 (37%), Gaps = 17/175 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGG 152
P + L C + C +C + +K +++ ++ + A+ Y + + +GG
Sbjct: 38 PGTRFIVFLQGCAMRCLYCHNPDTWAFKKENLMTPEEVLKKAMRYQDYWGKEGGITVSGG 97
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKE 202
DPL+ L L L K + S P + + + ++ +K
Sbjct: 98 DPLLHIDFLLA--LFRLAKKKGINTCLDTSAQPFSNKESFYEKFLALMEVTDTVLLDIKA 155
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
++ + HP + + L+ G+ + + VL+ G+ D E L L
Sbjct: 156 MDSDLHKKLTG-HPNQ---NILDCGRLLSTLGVDVWIRHVLVPGLTDSEEELLAL 206
>gi|269798274|ref|YP_003312174.1| biotin and thiamin synthesis associated [Veillonella parvula DSM
2008]
gi|269094903|gb|ACZ24894.1| biotin and thiamin synthesis associated [Veillonella parvula DSM
2008]
Length = 472
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + ++ VI
Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+G DPL L+ +L++++ I ++
Sbjct: 140 ESGEDPLNNP---LEYILESIKTIYGIKNK 166
>gi|229816073|ref|ZP_04446394.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM
13280]
gi|229808387|gb|EEP44168.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM
13280]
Length = 441
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV---IFTGGDPL 155
L + HVC + C +CF + + ++ K AA+ Y+ S +V +F GG+P+
Sbjct: 92 LHVAHVCNLGCDYCFAGKGNYGTQSLLMKEKVAYAAVDYLVHNSSKNDVLTIVFFGGEPM 151
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ ++ L H + RF + + +N I+ KE G + +
Sbjct: 152 L--NEPLIWKTVDYAESAHPKR-RF-TYSITTNGTLLNDRAIEAFKEHGFSILV 201
>gi|152967568|ref|YP_001363352.1| molybdenum cofactor biosynthesis protein A [Kineococcus
radiotolerans SRS30216]
gi|151362085|gb|ABS05088.1| molybdenum cofactor biosynthesis protein A [Kineococcus
radiotolerans SRS30216]
Length = 368
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 83/214 (38%), Gaps = 25/214 (11%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + + VL ++ + + EV FTGG+PL+
Sbjct: 44 LTDRCNLRCHYCMPPEGLPWLDRARVLDDEEVVRLVRLAVRDLGVREVRFTGGEPLLR-- 101
Query: 160 KRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHAN 214
K L++++ ++ + + + + + L +AG V +++
Sbjct: 102 KGLERIVAATTALRTDEGEPVRTSLTTNGIGLHHR------ARALADAGLTRVNVSLDTL 155
Query: 215 HPYEFSEEAIA---------AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P F+E + A + +VLL+G NDD A+L+R +
Sbjct: 156 RPDRFAEITRRDRHADVLAGVEAAAAAGLAPVKVNAVLLRGTNDD--EAADLLRWALAGG 213
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
+ ++ L + R + ++I+++L+
Sbjct: 214 YRLRFIEQMPLDPHGTWRREDMITAEEILSALQR 247
>gi|154500609|ref|ZP_02038647.1| hypothetical protein BACCAP_04282 [Bacteroides capillosus ATCC
29799]
gi|150270498|gb|EDM97807.1| hypothetical protein BACCAP_04282 [Bacteroides capillosus ATCC
29799]
Length = 253
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 71/194 (36%), Gaps = 21/194 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTG 151
P + CP+ C +C + G++ GT ++ + AA Y + K + + TG
Sbjct: 21 PGIRFVVFFQGCPMRCLYCHNPDTWGTEGGTEMTVDELLAA--YQRNKGFYRQGGITATG 78
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+PL L L ++ + + + + P E +
Sbjct: 79 GEPL-LQLPFLTELFTAAKEQG-IHTC-LDTSGIVYRPDHRQGEFDALFAVTDLVLLDIK 135
Query: 212 HAN---HPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL------M 258
HA+ H + + +A L A + ++ + V++ G+ D P+ L L
Sbjct: 136 HADPQGH-RQLTGQDQSPVLAFARALEQAKVPIIVRHVVVPGLTDSPQELTALGRLIAPF 194
Query: 259 RTFVELRIKPYYLH 272
R L + PY+
Sbjct: 195 RNLKGLEVLPYHTM 208
>gi|158317474|ref|YP_001509982.1| radical SAM domain-containing protein [Frankia sp. EAN1pec]
gi|158112879|gb|ABW15076.1| Radical SAM domain protein [Frankia sp. EAN1pec]
Length = 414
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIWE----- 146
+I+LK+ C + C +C+ Q+ +S EA + ++ E
Sbjct: 37 RQIVLKINSRCNLSCTYCYVYHQADQNWRQQPVTMSPAVVEATARRLAAHAKTHELPWMQ 96
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY 171
+I GG+PL+ H L+ V + L
Sbjct: 97 IILHGGEPLLAGHDHLRNVAERLLA 121
>gi|325291166|ref|YP_004267347.1| GTP cyclohydrolase subunit MoaA [Syntrophobotulus glycolicus DSM
8271]
gi|324966567|gb|ADY57346.1| GTP cyclohydrolase subunit MoaA [Syntrophobotulus glycolicus DSM
8271]
Length = 318
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ +C + C++C + +LS ++ E ++ + I ++ TGG+PL+
Sbjct: 16 VTDLCNLRCKYCRPEAGIKKKAHEDILSLEEIEN-ISKAAVEIGIRKIRLTGGEPLVR-- 72
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
K + +++ L IK ++ L +
Sbjct: 73 KGILQLITRLSRIKGLEDLGLTTNGT 98
>gi|307730932|ref|YP_003908156.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
CCGE1003]
gi|307585467|gb|ADN58865.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
CCGE1003]
Length = 461
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 23/133 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203
Query: 154 -----PLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L L + ++ + I ++ +R+ + P+ LI + K
Sbjct: 204 NAFRGALTLGSSEIADFATLIEYVAEIPGIERIRYTTS----HPKEFTQRLIDTYAKVPK 259
Query: 206 PVYIAIHANHPYE 218
+ H + P +
Sbjct: 260 ---LVSHLHLPVQ 269
>gi|225567883|ref|ZP_03776908.1| hypothetical protein CLOHYLEM_03956 [Clostridium hylemonae DSM
15053]
gi|225163361|gb|EEG75980.1| hypothetical protein CLOHYLEM_03956 [Clostridium hylemonae DSM
15053]
Length = 307
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 53/138 (38%), Gaps = 17/138 (12%)
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L+++ V+I+ +R +D I +++ ++ KPV++ + +E
Sbjct: 102 PYLRRIFTEAARHPDVRIISIATRPDCLDKDVI--SMLEDIRRI-KPVWVELGLQTIHEE 158
Query: 220 S----------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI--- 266
+ A + L +AGI ++ + +L +D ++ + + I
Sbjct: 159 TAAFIGRGYSLPVFEQAAAMLQDAGIDVIVHT-ILALPGEDLSMMLDTLHYLNGAGIQGL 217
Query: 267 KPYYLHHPDLAAGTSHFR 284
K LH A +++
Sbjct: 218 KLQLLHVLRGTALAAYYE 235
>gi|182412684|ref|YP_001817750.1| radical SAM domain-containing protein [Opitutus terrae PB90-1]
gi|177839898|gb|ACB74150.1| Radical SAM domain protein [Opitutus terrae PB90-1]
Length = 231
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C + C +C + +G E + +Q V+ TGG+P+I K
Sbjct: 26 TSGCNLRCNWCDTPYASWNPEG---KPWRIEQIVREVQSHPTARHVVLTGGEPMI--AKE 80
Query: 162 LQKVLKTLRYIK-HVQI 177
+ ++ L+ + H+ I
Sbjct: 81 IAELAAQLKGLHYHITI 97
>gi|15679238|ref|NP_276355.1| coenzyme PQQ synthesis protein III [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622338|gb|AAB85716.1| coenzyme PQQ synthesis protein III [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 247
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 5/80 (6%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R + C + C +C E G + ++ + + + + TGG+P
Sbjct: 24 RRQIFVRFAGCNLNCSYCDTPESRDPSAGRLFTAPELTEIIEGLI-TPDFHSISITGGEP 82
Query: 155 LILSHKRLQKVLKTLRYIKH 174
L+ + + L H
Sbjct: 83 LLYPD----FITELLEESPH 98
>gi|114319176|ref|YP_740859.1| D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase
[Alkalilimnicola ehrlichii MLHE-1]
gi|114225570|gb|ABI55369.1| D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase
[Alkalilimnicola ehrlichii MLHE-1]
Length = 192
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 27/129 (20%)
Query: 210 AIHANHPYEFS--EEAIAAISRLANAGIIL---LSQSVLLKGINDDP---EILANLMRTF 261
+ P E+ + AI+RL AG+ + +QS + +G+ DD I A++
Sbjct: 27 DAYIKAPEEWRVIPGSAEAIARLNRAGVPVAVCTNQSGIGRGLFDDATYRAITAHMHAVL 86
Query: 262 VELRIKPYYLHHP----------------DLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
+ + H L +HF ++ I SL++ +G
Sbjct: 87 ARAGARIDAVFHCPHRPEDRCECRKPRPGLLLQAAAHFDCPLDGVPVIGDSLRDLEAGRA 146
Query: 306 Q---PFYIL 311
P +
Sbjct: 147 VNARPMLVR 155
>gi|313892882|ref|ZP_07826459.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. oral
taxon 158 str. F0412]
gi|313442235|gb|EFR60650.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. oral
taxon 158 str. F0412]
Length = 321
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C E+ + +LS + L + V TGG+PL+
Sbjct: 16 LTDACNFCCPYCRPAEITPQSQTQLLSVDEWMTILEAFHR-IGVKAVRLTGGEPLLYP-- 72
Query: 161 RLQKVLKTLRY 171
++++L +
Sbjct: 73 HIEELLGRIND 83
>gi|282883211|ref|ZP_06291810.1| protein YqeV [Peptoniphilus lacrimalis 315-B]
gi|281297023|gb|EFA89520.1| protein YqeV [Peptoniphilus lacrimalis 315-B]
Length = 431
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 47/132 (35%), Gaps = 18/132 (13%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY-IQ-EKSQIWEVIFT 150
+ R +K+ C YC +C + + S+ + I+ + E+I T
Sbjct: 143 HKTRSYMKVQDGCNRYCTYC-----IIPYARGTIRSRRIGDCVREAIRLANAGYKEIILT 197
Query: 151 G-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-E 202
G D L RL +++ + + ++ +R S P + + I C K
Sbjct: 198 GIHVGSYGVD---LGPVRLIDLIEAIAEVDGIERIRLSSVEPNIISEDFMRRAIACSKLC 254
Query: 203 AGKPVYIAIHAN 214
+ + +N
Sbjct: 255 DHFHLSLQSGSN 266
>gi|254420951|ref|ZP_05034675.1| molybdenum cofactor biosynthesis protein A [Brevundimonas sp. BAL3]
gi|196187128|gb|EDX82104.1| molybdenum cofactor biosynthesis protein A [Brevundimonas sp. BAL3]
Length = 330
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 4/107 (3%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ + + G R+ L + VC C +C + + L+ ++ +A
Sbjct: 1 MAFDAAAMTDGFGRRFHYLRLS-VTEVCNFSCTYCLPNGWKKTGPLSFLTVEEIGRLVAG 59
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ +V TGG+P + +L+T+ V + +
Sbjct: 60 F-SDLGLSKVRLTGGEPTVRKD--FDAILRTVAASPGVAKIAVTTNG 103
>gi|116695408|ref|YP_840984.1| molybdopterin biosynthesis protein [Ralstonia eutropha H16]
gi|113529907|emb|CAJ96254.1| molybdopterin biosynthesis protein [Ralstonia eutropha H16]
Length = 381
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C +E G LS + + + +V TGG+PL
Sbjct: 57 VIDQCNFRCTYCMPKERFGRDYPFLSPEQRLSDAELLRIVRAFVG-LGVEKVRLTGGEPL 115
Query: 156 ILSHKRLQKVLKTLRYIKHV 175
+ K ++ +++ + ++ +
Sbjct: 116 LR--KGIESLVERIAAMRTL 133
>gi|317499049|ref|ZP_07957330.1| radical SAM superfamily protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|316893699|gb|EFV15900.1| radical SAM superfamily protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 458
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E + ++S++ + AL ++ E S EV F GG+PL
Sbjct: 96 LHIAHDCNLACRYCFAEEGEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFGGEPL 155
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFH 181
+ K + ++L H + RF
Sbjct: 156 MNFDVVKEIVAYGRSLEE-THDKKFRFT 182
>gi|312793464|ref|YP_004026387.1| RNA modification enzyme, miab family [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180604|gb|ADQ40774.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 434
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 75/228 (32%), Gaps = 23/228 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFT- 150
R +K+ C +C +C G+ + L ++ + ++ I + +
Sbjct: 141 HSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSLKSIEEEVVRLVQKGYKEFVITGINISA 200
Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
G D + L V++ + I+ V+ +R S P++ L+ + +++
Sbjct: 201 YGKD--LDGKVTLIDVIERVNKIEGVKRIRLSSLEPVIMNDEFIERLLG-FDKLCHHLHL 257
Query: 210 AIHANHPYEF--------SEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRT 260
++ + + + + R+ + + ++ G + E +
Sbjct: 258 SLQSGSDKILKLMNRHYTTAQYQGIVDRIREKWEDVAFTTDIIVGFPGETEEDFNATLEF 317
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLT-------IEEGQKIVASLKEKI 301
++ ++ GT + + E KI+ + +
Sbjct: 318 VQKIGFSRIHVFRFSPKKGTKAYDMPNQVDSKEKERRSKIMKEVAANL 365
>gi|291560706|emb|CBL39506.1| Arylsulfatase regulator (Fe-S oxidoreductase) [butyrate-producing
bacterium SSC/2]
Length = 458
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E + ++S++ + AL ++ E S EV F GG+PL
Sbjct: 96 LHIAHDCNLACRYCFAEEGEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFGGEPL 155
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFH 181
+ K + ++L H + RF
Sbjct: 156 MNFDVVKEIVAYGRSLEE-THDKKFRFT 182
>gi|284163849|ref|YP_003402128.1| MiaB-like tRNA modifying enzyme [Haloterrigena turkmenica DSM 5511]
gi|284013504|gb|ADB59455.1| MiaB-like tRNA modifying enzyme [Haloterrigena turkmenica DSM 5511]
Length = 417
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 8/109 (7%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+L + C C +C ++ G + ++ E A A I + E+ TG D +
Sbjct: 126 ILPIARGCMSDCSYCITKQATGK-IDSPPIEENVEKARALI--HAGAKEIRITGQDTGVY 182
Query: 158 SHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+L ++L + I+ +R P I EL E
Sbjct: 183 GWDEGERKLHRLLSEICAIEGDFRVRVGMANPKGVHG-IREELAAVFAE 230
>gi|260892512|ref|YP_003238609.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4]
gi|260864653|gb|ACX51759.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4]
Length = 437
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 73/219 (33%), Gaps = 38/219 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI----- 148
R LK+ C +C +C + G + L + A ++ + V+
Sbjct: 147 RTRAFLKVQEGCRDFCTYCIVPYVRGPCRSRPL--EAVLKAARRFLQEGFVELVLTGTHL 204
Query: 149 -FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G D + L +++ L ++ LR S ++P + +LI+ ++ +
Sbjct: 205 GLYGQD--LTPSLTLAHLVERLLEFPELKRLRLSS----IEPLEVTADLIELMRRDSR-- 256
Query: 208 YIAIHANHP-----YEF---------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
H + P E + + ++RL A + + ++ G + E
Sbjct: 257 -FCPHLHIPLQSGDDEILRRMGRRYTTAQYRELVARLREAVPDIAITTDVMVGFPGETEE 315
Query: 254 ----LANLMRTFVELRIKPYYLHHPDLAAGTSHF--RLT 286
L+R + + + P + F R+
Sbjct: 316 AFARTERLLRELELAGMHV-FPYSPRPGTPAARFPGRVP 353
>gi|237747112|ref|ZP_04577592.1| ribonucleoside-triphosphate reductase [Oxalobacter formigenes
HOxBLS]
gi|229378463|gb|EEO28554.1| ribonucleoside-triphosphate reductase [Oxalobacter formigenes
HOxBLS]
Length = 227
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 93 YPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
+P R+ + CP CR+C R ++ + +G + LA+++ + + E V+F+
Sbjct: 22 FPGRLAAVVFCQGCPWRCRYCHNRHLLPTGEGGRY---LWQDVLAWLKTRQGLLEGVVFS 78
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
GG+PL+ K+L + L H Q V P+R+
Sbjct: 79 GGEPLLQ--KQLPEAADQL----HRQGFEVALHTSGVYPERL 114
>gi|167766768|ref|ZP_02438821.1| hypothetical protein CLOSS21_01276 [Clostridium sp. SS2/1]
gi|167711522|gb|EDS22101.1| hypothetical protein CLOSS21_01276 [Clostridium sp. SS2/1]
Length = 458
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E + ++S++ + AL ++ E S EV F GG+PL
Sbjct: 96 LHIAHDCNLACRYCFAEEGEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFGGEPL 155
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFH 181
+ K + ++L H + RF
Sbjct: 156 MNFDVVKEIVAYGRSLEE-THDKKFRFT 182
>gi|229102501|ref|ZP_04233207.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
gi|228680891|gb|EEL35062.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
Length = 383
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 61/173 (35%), Gaps = 10/173 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E ++FTGGD
Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPM-LVFTGGD 72
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----GKPVY 208
PL+ + K V++ S P V + I L G
Sbjct: 73 PLMRPDV---YDIAEYAVKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGPTAE 129
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H E + + AI L I + +V+ D + +A L+
Sbjct: 130 IHDHFRGTEESFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLKEMAMLIEEL 182
>gi|317128304|ref|YP_004094586.1| RNA modification enzyme, MiaB family [Bacillus cellulosilyticus DSM
2522]
gi|315473252|gb|ADU29855.1| RNA modification enzyme, MiaB family [Bacillus cellulosilyticus DSM
2522]
Length = 448
Score = 38.3 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 22/146 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + + A + E++ TG
Sbjct: 144 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRKP-EEVIKQAEQLVAS--GYKEIVLTGIH 200
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + L +L L + ++ +R S ++ +I E+IQ + ++ K
Sbjct: 201 TGGYGED---MKDYSLANLLLDLEKVDGLKRIRISS----IEASQITDEVIQVIDQSEK- 252
Query: 207 VYIAIHANHPYEFSEEAIAAISRLAN 232
+ H + P + + + R+
Sbjct: 253 --VVNHLHVP--LQSGSNSVLKRMRR 274
>gi|282849197|ref|ZP_06258582.1| putative nitrogenase cofactor biosynthesis protein NifB
[Veillonella parvula ATCC 17745]
gi|282580901|gb|EFB86299.1| putative nitrogenase cofactor biosynthesis protein NifB
[Veillonella parvula ATCC 17745]
Length = 276
Score = 38.3 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 80/280 (28%), Gaps = 47/280 (16%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+E+ + P + S G +H L + C + C +C R+ ++
Sbjct: 1 MKEIQGQSFLQNHPCYNKAASANWGRLH-------LPVAPNCNIQCNYCNRKYDCANENR 53
Query: 124 TVLSSKDT--EAALAYIQ----EKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHV- 175
++ + A A+++ + I V G GDP+ + K L+ + HV
Sbjct: 54 PGVTQHVYTPQEAAAFVRKVFDARQDISVVGIAGPGDPMCDADKTLETFRLVKKDFPHVM 113
Query: 176 ---------------QILRFHSRVPIVDPQRINPEL---IQCLKEAGKPVYIAIHANHPY 217
I + I+PE+ + + +Y +
Sbjct: 114 LCLSSNGLAVPDYVNDIADLGITHVTITANAIDPEIAKNVYSMVRYEGNIYK--GIDGAR 171
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
E +I +L II+ +V++ +N D +
Sbjct: 172 ILLERQAESIRKLKEKNIIVKINTVVVPDVNMDHVPAIAKQAE--AWGVDLMNCIAMIPV 229
Query: 278 AGT--SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
T + R E + Y+ +
Sbjct: 230 HDTVFENHRGPTSEEIDNMRQFIGH--------YVPQMTH 261
>gi|54026287|ref|YP_120529.1| molybdenum cofactor biosynthesis protein A [Nocardia farcinica IFM
10152]
gi|54017795|dbj|BAD59165.1| putative molybdopterin biosynthesis protein [Nocardia farcinica IFM
10152]
Length = 347
Score = 38.3 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + +L+ + +A E+ + EV FTGG+PL+
Sbjct: 37 ITEKCSLRCTYCMPEEGLPPIPAEELLTVDEIVRLVALAVEELGVREVRFTGGEPLLRRD 96
Query: 160 KRLQKVLK 167
L++++
Sbjct: 97 --LERIIA 102
>gi|289550653|ref|YP_003471557.1| MiaB family protein [Staphylococcus lugdunensis HKU09-01]
gi|289180185|gb|ADC87430.1| MiaB family protein [Staphylococcus lugdunensis HKU09-01]
Length = 448
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + + E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-KKVVEQATTLV--NAGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I ++ +R S ++ ++ E+I ++++ K
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLETIDGLERIRISS----IEASQLTDEVIDVIEKSNK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|119468710|ref|ZP_01611762.1| molybdenum cofactor biosynthesis protein A [Alteromonadales
bacterium TW-7]
gi|119447766|gb|EAW29032.1| molybdenum cofactor biosynthesis protein A [Alteromonadales
bacterium TW-7]
Length = 323
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 64/207 (30%), Gaps = 17/207 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C LS + ++ I ++ TGG+P +
Sbjct: 17 ITDVCNFKCVYCLPDGYQCDHDREFLSLNEISNTISAF-AHHGITKLRITGGEPTLRKD- 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQR---INPEL--IQCLKEAGKPVYIAIHANH 215
V++ + + + + + ++ L I + P H
Sbjct: 75 -FIDVIRVAKDTPGITKIAATTNGFSMHKHINDWVDAGLNAINVSIDTLDPRMFNTITGH 133
Query: 216 PYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDP--EILANLMRTFVELRIKPYYLH 272
+ + I +GI + SVL+K N LA L V +R ++
Sbjct: 134 DKFNT--VMKGIDAALESGIESVKINSVLMKQYNGQELDTFLAYLKHRPVTMR----FIE 187
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKE 299
+ F GQ I A L+
Sbjct: 188 LMQTNDNKAFFDKNHVSGQSIKARLRA 214
>gi|117927472|ref|YP_872023.1| hypothetical protein Acel_0263 [Acidothermus cellulolyticus 11B]
gi|117647935|gb|ABK52037.1| conserved hypothetical protein [Acidothermus cellulolyticus 11B]
Length = 380
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 31/217 (14%), Positives = 62/217 (28%), Gaps = 49/217 (22%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
+VC CRFC ++G S ++ +++ GG
Sbjct: 57 TNVCVTACRFCAFYRPPKHEEGWTHSIEEILRRCGE-AVDLGATQIMLQGG---HHPDLG 112
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
++ R IK + +V E++ + +G
Sbjct: 113 IEWYEAVFRAIKQ-------AYPNLVLHSLGGSEVVHIARTSGLTF-------------- 151
Query: 222 EAIAAISRLANAG----------IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
I RL +AG I++ Q L+ + + +M T L ++
Sbjct: 152 --AEVIRRLRDAGLDSFAGAGAEILVDRQRRLIAPLKESGATWLEVMETAHRLGVQSTAT 209
Query: 272 HHP----DLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
A H R ++ ++++ G
Sbjct: 210 FMMGTGETNAERIEHLR--------LIRQVQDRTGGF 238
>gi|24376196|ref|NP_720240.1| molybdenum cofactor biosynthesis protein A [Shewanella oneidensis
MR-1]
gi|24351247|gb|AAN57683.1|AE015904_6 molybdenum cofactor biosynthesis protein A, putative [Shewanella
oneidensis MR-1]
Length = 327
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPLIL 157
+ C C +C E K VL ++ LA+I + + + ++ TGG+PL+
Sbjct: 19 VTDRCDFRCVYCMTEEPCFLPKDHVLHLEE----LAWIAQAFTELGVTKIRLTGGEPLVR 74
Query: 158 SH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
S +L +L L +K + + SR+ + L
Sbjct: 75 SDCDQLVNLLGKLPGLKDLSMTTNGSRLSKFAKPMFDAGL 114
>gi|313893929|ref|ZP_07827495.1| putative nitrogenase cofactor biosynthesis protein NifB
[Veillonella sp. oral taxon 158 str. F0412]
gi|313441493|gb|EFR59919.1| putative nitrogenase cofactor biosynthesis protein NifB
[Veillonella sp. oral taxon 158 str. F0412]
Length = 276
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 80/280 (28%), Gaps = 47/280 (16%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+E+ + P + S G +H L + C + C +C R+ ++
Sbjct: 1 MKEIQGQSFLQNHPCYNKAASANWGRLH-------LPVAPNCNIQCNYCNRKYDCANENR 53
Query: 124 TVLSSKDT--EAALAYIQ----EKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHV- 175
++ + A A+++ + I V G GDP+ + K L+ + HV
Sbjct: 54 PGVTQHVYTPQEAAAFVRKVFDARQDISVVGIAGPGDPMCDADKTLETFRLVKKDFPHVM 113
Query: 176 ---------------QILRFHSRVPIVDPQRINPEL---IQCLKEAGKPVYIAIHANHPY 217
I + I+PE+ + + +Y +
Sbjct: 114 LCLSSNGLAVPDYVNDIADLGITHVTITANAIDPEIAKNVYSMVRYEGNIYK--GIDGAR 171
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
E +I +L II+ +V++ +N D +
Sbjct: 172 ILLERQAESIRKLKEKNIIVKINTVVVPDVNMDHVPAIAKQAE--AWGVDLMNCIAMIPV 229
Query: 278 AGT--SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
T + R E + Y+ +
Sbjct: 230 HDTAFENHRGPTSEEIDNMRQFIGH--------YVPQMTH 261
>gi|300813542|ref|ZP_07093873.1| MiaB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512290|gb|EFK39459.1| MiaB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 431
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 47/132 (35%), Gaps = 18/132 (13%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY-IQ-EKSQIWEVIFT 150
+ R +K+ C YC +C + + S+ + I+ + E+I T
Sbjct: 143 HKTRSYMKVQDGCNRYCTYC-----IIPYARGTIRSRRIGDCVREAIRLANAGYKEIILT 197
Query: 151 G-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-E 202
G D L RL +++ + + ++ +R S P + + I C K
Sbjct: 198 GIHVGSYGVD---LGPVRLIDLIEAIAEVDGIERIRLSSVEPNIISEDFMRRAIACSKLC 254
Query: 203 AGKPVYIAIHAN 214
+ + +N
Sbjct: 255 DHFHLSLQSGSN 266
>gi|194868796|ref|XP_001972335.1| GG15474 [Drosophila erecta]
gi|190654118|gb|EDV51361.1| GG15474 [Drosophila erecta]
Length = 385
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYI 138
+SPL R+ + + L C + C +C E V K +L++ + I
Sbjct: 55 QRKNSPLTDSFGRHHTYLRISLTERCNLRCDYCMPAEGVQLQPKNNLLTTGEILRLAR-I 113
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + ++ TGG+P + + +++ ++ + ++ + +
Sbjct: 114 FVEQGVRKIRLTGGEPTVRRD--IVEIVAQMKALPQLEQVGITTNG 157
>gi|170290387|ref|YP_001737203.1| radical SAM domain-containing protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174467|gb|ACB07520.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 361
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 15/191 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-IFTGG 152
P I +L C + C+ C R E + L ++ + I+E + I TGG
Sbjct: 7 PLLIFWELTKACKLKCKHC-RAEAISEPLEDELKGEEALKLIEDIEEFGDPLPILILTGG 65
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL+ L++++ + + +R + D +LI + +
Sbjct: 66 DPLMRRD--LREIVSYAKR----KGIRMGIAPAVTDLISDKIDLIDEIGSVSISLDGIGE 119
Query: 213 ANHPYEFSEE----AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ + + L GI + +++ K ++ L L + +++ I+
Sbjct: 120 KHDLIRGDPGNFSRTLDYLKMLLRRGIKVQVNTLVAK---ENVSELPKLAKLLMDVGIRV 176
Query: 269 YYLHHPDLAAG 279
+ L
Sbjct: 177 WELFFLIKVGR 187
>gi|197117742|ref|YP_002138169.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
gi|197087102|gb|ACH38373.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
Length = 326
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQI 144
++ Y RI + C + C +C + V + +LS ++ I
Sbjct: 3 LIDAYGRRINYLRLSVTDRCNMRCSYCMPAQGVEKLEHKEMLSYEELYRVAGACIA-QGI 61
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++ TGG+PL+ K + L+ L + ++ L +
Sbjct: 62 EKIRVTGGEPLVR--KGIVPFLERLARVPGLKELVLTTNGL 100
>gi|154174160|ref|YP_001409198.1| radical SAM family protein [Campylobacter curvus 525.92]
gi|112803526|gb|EAU00870.1| radical SAM [Campylobacter curvus 525.92]
Length = 417
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 95 DRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
D + L C C FCF ++ ++K + ++ + V TGG
Sbjct: 67 DTHSVYLSLKCNKNCYFCFNPNQDDFKKDVKRKFAAKQIANKI--LKNNQNVKFVALTGG 124
Query: 153 DPLILSHKRLQ 163
+PL+ L+
Sbjct: 125 EPLLYKDDALE 135
>gi|57505797|ref|ZP_00371722.1| molybdopterin cofactor biosynthesis protein A [Campylobacter
upsaliensis RM3195]
gi|57015827|gb|EAL52616.1| molybdopterin cofactor biosynthesis protein A [Campylobacter
upsaliensis RM3195]
Length = 320
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 101 LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C C +C + K +LS ++ + + + ++ +GG+PL+
Sbjct: 17 VTQRCNFRCLYCMPKIPFDYVPKEDILSFEEMFVFVKELI-DRGVKKIRISGGEPLLRKD 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVP 185
L ++ +R KH L S
Sbjct: 76 --LSIFVRMIRSYKHDIDLALTSNGF 99
>gi|308051422|ref|YP_003914988.1| GTP cyclohydrolase subunit MoaA [Ferrimonas balearica DSM 9799]
gi|307633612|gb|ADN77914.1| GTP cyclohydrolase subunit MoaA [Ferrimonas balearica DSM 9799]
Length = 326
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C K ++ + L + +V TGG+P +
Sbjct: 19 ITDACNFKCEYCLPNGYHPDGKPRFMTLDEIRRVLHAF-STVGMRKVRITGGEPTLRKD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++VL+ V + +
Sbjct: 77 -FEEVLQLAANTPGVDTIATTTNG 99
>gi|294792135|ref|ZP_06757283.1| putative ThiH protein [Veillonella sp. 6_1_27]
gi|294457365|gb|EFG25727.1| putative ThiH protein [Veillonella sp. 6_1_27]
Length = 482
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + ++ VI
Sbjct: 90 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 149
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+G DPL L+ +L++++ I ++
Sbjct: 150 ESGEDPLNNP---LEYILESIKTIYGIKNK 176
>gi|77918995|ref|YP_356810.1| radical SAM domain-containing protein [Pelobacter carbinolicus DSM
2380]
gi|77545078|gb|ABA88640.1| radical SAM domain-containing protein [Pelobacter carbinolicus DSM
2380]
Length = 451
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 42/119 (35%), Gaps = 9/119 (7%)
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAAL 135
+ SP + YP ++ ++ C + C C ++ +S E
Sbjct: 7 AEAPASPESAALKAYPSKLFVESTTFCNLRCPMCVKQAADSQVIDADMSQQTFAALEPVF 66
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
Y++ V+ G+PL+ L+ + + + + + F S ++D R
Sbjct: 67 PYLESL-----VLNGIGEPLMHP-HILEWIRRARQKMPDDAWVGFQSNGLLLDRNRARD 119
>gi|300856539|ref|YP_003781523.1| putative Fe-S oxidoreductase [Clostridium ljungdahlii DSM 13528]
gi|300436654|gb|ADK16421.1| putative Fe-S oxidoreductase [Clostridium ljungdahlii DSM 13528]
Length = 455
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 88/236 (37%), Gaps = 44/236 (18%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L +L +++ E + E++++ ND R EE
Sbjct: 22 ALHEIDELV-YDILDDEGLPELEKVVELL-----------------NDKYKR------EE 57
Query: 67 LNILPEEREDPIG-DNNHSPL--KGIVHRYPDRILLK------LLHVCPVYCRFCFRREM 117
+ E + I + +S +GI ++ + H C + C++CF E
Sbjct: 58 VVEAYGEIQQLIEKEMLYSKDLYEGIAKKHESEPSFIKALCLNIAHDCNLRCKYCFADEG 117
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSH--KRLQKVLKTLRYI 172
+ ++S+K + A+ ++ EKS EV GG+PL+ K + + K +
Sbjct: 118 EYKGRRKLMSAKIGKKAIDFVIEKSGPRKNIEVDLFGGEPLMAFDAVKEIVEYAKKQEKL 177
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
H + +RF + +N E++ L + + + + E +++ +
Sbjct: 178 -HNKNIRFT---MTTNATLLNDEIMDYLDKNMGNIVL--SIDGRKEVNDKVRVRVD 227
>gi|77919684|ref|YP_357499.1| putative methyltransferase [Pelobacter carbinolicus DSM 2380]
gi|77545767|gb|ABA89329.1| putative methyltransferase [Pelobacter carbinolicus DSM 2380]
Length = 1014
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 9/111 (8%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQK 122
+ + + + G H L + + C + CR C G
Sbjct: 49 METAARCFLQRLPQGDAAVYPGRSHFLKTESLRELWFHITNRCNMNCRHCMFGSGPGDAA 108
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
L ++ TGG+PL+ H+R + + L +
Sbjct: 109 E--LDAERIVTLARQ-ASNLGCRVFALTGGEPLV--HRRFDYIARELLALP 154
>gi|82751179|ref|YP_416920.1| hypothetical protein SAB1448c [Staphylococcus aureus RF122]
gi|82656710|emb|CAI81137.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 448
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-EKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLEMINGLERIRISS----IEASQLTDEVIDVLERSTKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|288925016|ref|ZP_06418952.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
gi|288338206|gb|EFC76556.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
Length = 450
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 20/153 (13%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQE 140
S R LK+ C +C +C + R + L + EAAL
Sbjct: 143 SFQPSCSRGNRTRYFLKVQDGCSYFCTYCTIPYARGFSRNPSIASLVEQAREAALE---- 198
Query: 141 KSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
E++ TG GD +H+ ++K L ++ ++ R S ++P + EL+
Sbjct: 199 --GGREIVLTGVNIGDFGATTHESFLDLVKALDEVEGIERFRISS----LEPDLCSDELV 252
Query: 198 QCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
+ H + P S+E + + R
Sbjct: 253 EY---CSISRAFMPHFHIPLQSGSDEVLKLMHR 282
>gi|229824989|ref|ZP_04451058.1| hypothetical protein GCWU000182_00338 [Abiotrophia defectiva ATCC
49176]
gi|229790992|gb|EEP27106.1| hypothetical protein GCWU000182_00338 [Abiotrophia defectiva ATCC
49176]
Length = 435
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIWEVIFTGG 152
DRI + L + C + C++C+ ++ +K +L+ + L + + + + V F GG
Sbjct: 90 DRIEIMLTNTCNLSCKYCYAKDGTYGRKPRILNENEIIKYLNALFPIKYNYVNTVFFFGG 149
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+PL L+ K ++ + V+ I + S + + I E+ + + K + I
Sbjct: 150 EPL-LNFKVIKATCNFFEKL--VKKGDIQKLPSYTLVTNGTLITEEIAEFMAT--KEILI 204
Query: 210 AIHANHPYEFSEEAIA------AISRLANAGIILL 238
+ + P +++ R+ GI LL
Sbjct: 205 TVSIDGPKLINDKNRFDKNGKGTYERIKK-GINLL 238
>gi|188586401|ref|YP_001917946.1| Radical SAM domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351088|gb|ACB85358.1| Radical SAM domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 489
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
+ H C + C +CF S + + + A+ ++ S E+ F GG+PL
Sbjct: 120 VHPAHDCNMRCSYCFAEGGSYSHDISYMDIDTAKQAVEFLVNNSGDRKNLEIDFFGGEPL 179
Query: 156 ILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
L+ ++K + + + KH + +F + + +I L V +
Sbjct: 180 -LNFPVIEKCVAHAKELANKHGKHFKFT---LTTNGLALTDSIIDFLVSNRFAVVM 231
>gi|170729111|ref|YP_001763137.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC
51908]
gi|169814458|gb|ACA89042.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC
51908]
Length = 326
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 57/160 (35%), Gaps = 15/160 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C + + L+ + E +A E ++ TGG+P +
Sbjct: 17 MSVTDVCNFKCTYCLPDGYRPNGRSKFLALSEIENLVAAFAE-VGTQKIRITGGEPTLRK 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEA-----GKPVYIAI 211
+++ + ++ + + ++ ++ + + K Y
Sbjct: 76 D--FTDIIRAVADNDKIKTIATTTNGYRLEKHAKEWYDAGLRRINVSVDSLDPKMFYQIT 133
Query: 212 HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
N E + I +AG + +VLLKG+ND
Sbjct: 134 GENKFDE----VMRGIDAALDAGFERVKINAVLLKGLNDK 169
>gi|114561270|ref|YP_748783.1| molybdenum cofactor biosynthesis protein A [Shewanella
frigidimarina NCIMB 400]
gi|114332563|gb|ABI69945.1| GTP cyclohydrolase subunit MoaA [Shewanella frigidimarina NCIMB
400]
Length = 337
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C K T L+ + E +A E +V TGG+P +
Sbjct: 28 MSVTDVCNFKCTYCLPDGYRPDGKPTFLTLNEIENLVAGFGE-VGTQKVRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRV 184
+++ + ++ + +
Sbjct: 87 D--FTDIVRIVADNPNINTVAMTTNG 110
>gi|239977822|ref|ZP_04700346.1| hypothetical protein SalbJ_00205 [Streptomyces albus J1074]
gi|291449746|ref|ZP_06589136.1| predicted protein [Streptomyces albus J1074]
gi|291352695|gb|EFE79597.1| predicted protein [Streptomyces albus J1074]
Length = 365
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 17/147 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L+ L CP+ C C G + D +A + + ++ TGG+PL+
Sbjct: 17 VLVTLTRRCPLSCAHC--STGSGPDTDERPAPGDLRRLVASFTPRDRPDVMMLTGGEPLL 74
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPI-----VDPQRINPELIQCLKEAGKPVYIAI 211
+ +++ L + +R + R P + EA ++
Sbjct: 75 MP-----GLVRELA----LSAKEKGTRTAVLSGMFFARARSVPRAVLRAAEAVDHFSASL 125
Query: 212 HANHPYEF-SEEAIAAISRLANAGIIL 237
+H E AA+ L+ G +
Sbjct: 126 DLHHEREVPRAAVFAALRALSTTGTRV 152
>gi|304314308|ref|YP_003849455.1| MoaA related protein [Methanothermobacter marburgensis str.
Marburg]
gi|302587767|gb|ADL58142.1| MoaA related protein [Methanothermobacter marburgensis str.
Marburg]
Length = 227
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 6/106 (5%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ H I+ L C + CR+CF + ++ + I + I V+
Sbjct: 6 LSHISVSDIITVLTPTCNLRCRYCF----FTPRNCREYDAERIADRVLRISSEEGIDSVL 61
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
GG+P + L + + L HV I +R I+ +
Sbjct: 62 IAGGEPTLQRD--LPEFTEALSRDLHVTISTNGTRWEILRKSTFHE 105
>gi|329963574|ref|ZP_08301053.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
fluxus YIT 12057]
gi|328528563|gb|EGF55534.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
fluxus YIT 12057]
Length = 432
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 28/188 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFT 150
LK+ C C +C + G ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGKHVSR--PMEEILDEVRYLVAGGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + + L ++++ + I V+ +R H P +L + ++E Y+
Sbjct: 196 GVD--LYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPEDLFRVMRERPNVCKYM 249
Query: 210 AIHANHP---------YEFS-EEAIAAISRLANA--GIILLSQSVLLKGINDDPEILANL 257
I H + E I R GI L + ++++ + L
Sbjct: 250 DIALQHISDNMLGKMRRHVTKAETYQLIERFRKEVPGIHLRT-TLMVGHPGETEADFEEL 308
Query: 258 MRTFVELR 265
+ R
Sbjct: 309 KEFVRKAR 316
>gi|224024568|ref|ZP_03642934.1| hypothetical protein BACCOPRO_01294 [Bacteroides coprophilus DSM
18228]
gi|224017790|gb|EEF75802.1| hypothetical protein BACCOPRO_01294 [Bacteroides coprophilus DSM
18228]
Length = 365
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 37/207 (17%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV--IFTGG 152
++ + C ++C+ C ++ + + D + + EV IFTGG
Sbjct: 33 RQLFWECTQRCNIHCKHCGSDCKSTAEIP-DMPAADFLRVIDSLTPHVNPHEVNIIFTGG 91
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI--- 209
+PL+ L++V + L H R + + + + +Q L +AG
Sbjct: 92 EPLVRKD--LEEVGQALY---H----RGYPWSMVTNGLYLTDSRLQHLLKAGLHSITISL 142
Query: 210 -------AIHANHPYEFSEEAIAAISRLANA------GIILLSQSVLLKGINDDPEILAN 256
HP + ++A+ AI LA + ++ + L
Sbjct: 143 DGFADDHNWLRGHPQSY-QQAMHAIRMLAREQQLTWDVVTCVN--------RRNYSYLEQ 193
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHF 283
L + E ++ + L +H+
Sbjct: 194 LKDSLYEAGVRHWRLFTIFPVGRAAHY 220
>gi|83590083|ref|YP_430092.1| radical SAM family protein [Moorella thermoacetica ATCC 39073]
gi|83572997|gb|ABC19549.1| Radical SAM [Moorella thermoacetica ATCC 39073]
Length = 470
Score = 38.3 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 67/225 (29%), Gaps = 39/225 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQI----WEVIF 149
+L L C + C FC R+ + L ++ + L Y+ +I
Sbjct: 15 NILPLTSTCNLGCLFCSHRQNPPGVETWRLQPLKGEEIDNLLDYLDGDRKIVIGESATRL 74
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
G+PL L +R ++ + + + P LI+ L + +P+ I
Sbjct: 75 IEGEPLTHPD-----FLAIIRKVR--RRFPRARLEITTNGTLLTPNLIRELADL-QPLEI 126
Query: 210 AIHANHPYEFSEEAIAAI-------------SRLANAGIILLSQSVLLK-GINDDPEILA 255
+ N S E + L AGII Q L+ +
Sbjct: 127 NLSLNSA---SPEGRRRLMGDRNPGAALQAPMALQQAGIIY--QGSLVACPWLVGWDDFR 181
Query: 256 NLMRTFVELRIKPYYLHHP---DLAAGTSHFRLTIEEGQKIVASL 297
+ + + P LA F + +I L
Sbjct: 182 ETILYLARAGARTIRVFLPGYTRLAPPELRFPPGLRR--QIEEEL 224
>gi|332883646|gb|EGK03927.1| hypothetical protein HMPREF9456_01468 [Dysgonomonas mossii DSM
22836]
Length = 367
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 6/91 (6%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
H + +H+ ++ + C + C+ C K + +D + +
Sbjct: 18 RQHKKNQTSLHKLNY-LIWECTLRCNLACKHCGSDCH-KDMKQKDMPLEDFLRVVDEVTP 75
Query: 141 KSQIWE--VIFTGGDPLILSHKRLQKVLKTL 169
+ ++ TGG+PL+ + L+ + L
Sbjct: 76 HVNPHDTMIVITGGEPLMRND--LEVCGQEL 104
>gi|320039131|gb|EFW21066.1| hypothetical protein CPSG_02909 [Coccidioides posadasii str.
Silveira]
Length = 411
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 7/129 (5%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+H ++ P + + + +C ++CR C K +S + E L +
Sbjct: 89 MESHQQWP-LLRDTPSVLQINVGKLCNLHCRHCHVEAGPTKTKEN-MSLETIERCLEVLA 146
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
I V TGG P + + Q +++ R + + + +V +R L+
Sbjct: 147 MSPCITTVDITGGAPEL--NPYFQTLVREARKMG--KTV-IDRCNLVVLWERGQEGLVNF 201
Query: 200 LKEAGKPVY 208
L E +
Sbjct: 202 LAEQKVNIV 210
>gi|254460688|ref|ZP_05074104.1| radical SAM domain protein [Rhodobacterales bacterium HTCC2083]
gi|206677277|gb|EDZ41764.1| radical SAM domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 317
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQIWEVIFTGG 152
P + +C + C+ C+ + +++ + L ++ + E+ FTGG
Sbjct: 34 PQTLWFNTGTLCNIECKNCYILSSPKNDALVYITADEVRDYLDQLEIRNWGVREIAFTGG 93
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+P ++ + ++ +L V IL R + R L+ + + I
Sbjct: 94 EPF-MNPEIIEITRASLERGYDVLILTNAMRPMMRKSMR--AGLLDLNGAYPGKLTMRIS 150
Query: 213 ANHPYEFSEE 222
+H + +
Sbjct: 151 VDHWDSVNHD 160
>gi|57168666|ref|ZP_00367798.1| molybdopterin cofactor biosynthesis protein A [Campylobacter coli
RM2228]
gi|305432705|ref|ZP_07401865.1| molybdenum cofactor biosynthesis protein A [Campylobacter coli
JV20]
gi|57019947|gb|EAL56627.1| molybdopterin cofactor biosynthesis protein A [Campylobacter coli
RM2228]
gi|304444214|gb|EFM36867.1| molybdenum cofactor biosynthesis protein A [Campylobacter coli
JV20]
Length = 320
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 13/160 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C + Q L S + + I ++ TGG+PL+
Sbjct: 17 VTQRCNFRCLYCMPKIPFNHQPKENLLSFEELFLFVKVAIDEGIEKIRITGGEPLLRKD- 75
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKE-AGKPVYIAIHA 213
L +K + K L + ++ L L K I
Sbjct: 76 -LSVFIKMINDYKKDLDLAITTNGFLLKDFAKDLKDAGLKRLNISLDTLESKKAKILAQ- 133
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ + +A I + G+ + +V+LKG+NDD I
Sbjct: 134 ---KDVLDSVLAGIDEALSVGLKVKLNTVVLKGLNDDELI 170
>gi|269837430|ref|YP_003319658.1| ATPase associated with various cellular activities AAA_5
[Sphaerobacter thermophilus DSM 20745]
gi|269786693|gb|ACZ38836.1| ATPase associated with various cellular activities AAA_5
[Sphaerobacter thermophilus DSM 20745]
Length = 321
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 17/136 (12%)
Query: 121 QKGTVLSSKDTEAAL--AYIQEKSQIWEVIFTGGDPLIL------SHKRLQKVLKTLRY- 171
+ +V + E Y+ E+ + V G P++L + + + L L
Sbjct: 117 EDKSVARDEAMEEIFSSDYLIERPLLQAVRHKGKAPVLLIDEIDRADEEFEAFLLELLSD 176
Query: 172 ----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF---SEEAI 224
I + +R + ++ EL LK +I + N E + +
Sbjct: 177 FQITIPEIGTIRAETPPIVIITSNRTRELHDALKRRCLYHWID-YPNVEKELRIITAKVP 235
Query: 225 AAISRLANAGIILLSQ 240
RLA + + Q
Sbjct: 236 GISERLAQQVAVFIHQ 251
>gi|303318379|ref|XP_003069189.1| hypothetical protein CPC735_023800 [Coccidioides posadasii C735
delta SOWgp]
gi|240108875|gb|EER27044.1| hypothetical protein CPC735_023800 [Coccidioides posadasii C735
delta SOWgp]
Length = 411
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 7/129 (5%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+H ++ P + + + +C ++CR C K +S + E L +
Sbjct: 89 MESHQQWP-LLRDTPSVLQINVGKLCNLHCRHCHVEAGPTKTKEN-MSLETIERCLEVLA 146
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
I V TGG P + + Q +++ R + + + +V +R L+
Sbjct: 147 MSPCITTVDITGGAPEL--NPYFQTLVREARKMG--KTV-IDRCNLVVLWERGQEGLVNF 201
Query: 200 LKEAGKPVY 208
L E +
Sbjct: 202 LAEQKVNIV 210
>gi|315230693|ref|YP_004071129.1| molybdenum cofactor biosynthesis protein [Thermococcus barophilus
MP]
gi|315183721|gb|ADT83906.1| molybdenum cofactor biosynthesis protein [Thermococcus barophilus
MP]
Length = 307
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C R + + ++ ++ E + + I +V TGG+P I S
Sbjct: 18 VTEECNLSCFYCHREGQM--KGKRQMTPQEIERIVK-VASNLGIKKVKLTGGEPTIRSD- 73
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
+ +++K +R +V L + ++ R+ EL
Sbjct: 74 -IVEIVKRIR--PYVVDLSMTTNGTVM--HRLAEEL 104
>gi|291543502|emb|CBL16611.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus sp.
18P13]
Length = 447
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 18/151 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL- 155
LK+ C C +C + G + +D ++ E + E+ D
Sbjct: 147 AYLKIAEGCNNCCTYCAIPMIRGGF--RSVPMEDVLEEARWLTEH-GVTELTVIAQDTTR 203
Query: 156 ----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
+ RL ++L+ L I+ ++ +R P+RI +L++ + K V Y+
Sbjct: 204 YGEDLYGESRLPELLEQLCRIQGIRWIRV----LYCYPERITDKLLEVMAREEKLVKYLD 259
Query: 211 IHANHPYEFSEEAIAAISRLANAG--IILLS 239
I H + + + ++R +AG LL+
Sbjct: 260 IPIQH---CNGDILRRMNRQGDAGTLAALLN 287
>gi|255009413|ref|ZP_05281539.1| putative oxidoreductase [Bacteroides fragilis 3_1_12]
gi|313147172|ref|ZP_07809365.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313135939|gb|EFR53299.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 432
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 21/144 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G ++ + Y+ E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSR--PMEEILDEVRYLVSNGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + + L ++++ + I V+ +R H P +L + ++E Y+
Sbjct: 196 GVD--LYKKQMLPELIERVSEIPGVEWIRLH----YAYPAHFPEDLFRVMRERDNVCKYM 249
Query: 210 AIHANHPYEFSEEAIAAISRLANA 233
I H + + R+
Sbjct: 250 DIALQHI------SDNMLQRMRRH 267
>gi|310789381|gb|EFQ24914.1| phosphatidylinositol 3 [Glomerella graminicola M1.001]
Length = 2926
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHY-SIALTPVIANLI--NPHNPNDPIA 57
QLRH+ + + ++++ +++ + + ++L + +LI + HN ND +
Sbjct: 2329 QLRHRYQSHLNRARQWLQLDEQELRRVEQTRSEFVRLSLENYLLSLIASDEHN-NDALR 2386
>gi|298377685|ref|ZP_06987636.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19]
gi|298265388|gb|EFI07050.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19]
Length = 444
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 13/139 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + ++S E A ++ E++ TG
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQEVARKGG--KEIVLTGVN 205
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + +++ L + + R S ++P I E I + + + A
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAIDFVAHSKR---FA 258
Query: 211 IHANHPYEFSEEAIAAISR 229
H + P + +A+ + R
Sbjct: 259 PHFHIPLQSGSDAVLQLMR 277
>gi|283954557|ref|ZP_06372076.1| hypothetical protein C414_000230057 [Campylobacter jejuni subsp.
jejuni 414]
gi|283793961|gb|EFC32711.1| hypothetical protein C414_000230057 [Campylobacter jejuni subsp.
jejuni 414]
Length = 417
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ +K+ C C +C + G + K + + E++ TG +
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKS--RSVDEKTLLKQVEILGANGY-SEIVLTGTN 188
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K L K+L+ + I ++ +R S ++P +I+ ++ L EA ++
Sbjct: 189 IGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDEAWLERHLH 244
Query: 211 IHANHPYE 218
I H E
Sbjct: 245 IALQHTSE 252
>gi|255016549|ref|ZP_05288675.1| putative Fe-S oxidoreductase [Bacteroides sp. 2_1_7]
Length = 444
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 13/139 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + ++S E A ++ E++ TG
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQEVARKGG--KEIVLTGVN 205
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + +++ L + + R S ++P I E I + + + A
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAIDFVAHSKR---FA 258
Query: 211 IHANHPYEFSEEAIAAISR 229
H + P + +A+ + R
Sbjct: 259 PHFHIPLQSGSDAVLQLMR 277
>gi|210612282|ref|ZP_03289230.1| hypothetical protein CLONEX_01431 [Clostridium nexile DSM 1787]
gi|210151656|gb|EEA82663.1| hypothetical protein CLONEX_01431 [Clostridium nexile DSM 1787]
Length = 440
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 17/128 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
LK+ C +C +C ++ G+ +V + + A + + + E+I
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNF-RSVPIERLLKEAEDLVAQ--GVKEIILVAQETTL 202
Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-Y 208
G D + K L K+L+ L I ++ +R P+ I ELIQ +KE K Y
Sbjct: 203 YGKD--LYGEKSLHKLLRELCKISGLRWIRI----LYCYPEEITDELIQVIKEEDKICNY 256
Query: 209 IAIHANHP 216
+ + H
Sbjct: 257 LDLPIQHA 264
>gi|150006722|ref|YP_001301465.1| putative Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503]
gi|149935146|gb|ABR41843.1| putative Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503]
Length = 444
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 13/139 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + ++S E A ++ E++ TG
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQEVARKGG--KEIVLTGVN 205
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + +++ L + + R S ++P I E I + + + A
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAIDFVAHSKR---FA 258
Query: 211 IHANHPYEFSEEAIAAISR 229
H + P + +A+ + R
Sbjct: 259 PHFHIPLQSGSDAVLQLMR 277
>gi|303243581|ref|ZP_07329923.1| Radical SAM domain protein [Methanothermococcus okinawensis IH1]
gi|302486142|gb|EFL49064.1| Radical SAM domain protein [Methanothermococcus okinawensis IH1]
Length = 466
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + + C + C+ C+ G L++++ + I S + + F+GG+
Sbjct: 112 PFLVVWDVTYACNLRCKHCYANA--GKPLEDELNTEEALKTID-ILANSGVVAIAFSGGE 168
Query: 154 PLILSHKRLQKVLKTLRY 171
PL+ L +++ +
Sbjct: 169 PLMRKD--LFELIDRAKD 184
>gi|289423115|ref|ZP_06424930.1| arylsulfatase regulator [Peptostreptococcus anaerobius 653-L]
gi|289156446|gb|EFD05096.1| arylsulfatase regulator [Peptostreptococcus anaerobius 653-L]
Length = 457
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 80 DNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
++ + V+R P + L + H C + C++CF ++ K ++ + + A+ Y
Sbjct: 77 EDEYEFHPSFVNRQPVVKALCLNVAHDCNLKCKYCFAKQGDFGGKAELMPLEVGKKAIDY 136
Query: 138 IQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRI 192
+ S E+ F GG+PL ++ + ++ ++ R + + +R+ + +
Sbjct: 137 LIANSGSRKNLEIDFFGGEPL-MNWEVVKALVAYGREVEKPAGKNIRYT---ITTNGVLL 192
Query: 193 NPELIQCLKEAGKPVYI 209
+ E I + E V +
Sbjct: 193 DDEKIDFINEHMHNVVL 209
>gi|256842238|ref|ZP_05547742.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13]
gi|301308989|ref|ZP_07214934.1| Fe-S oxidoreductase [Bacteroides sp. 20_3]
gi|256736122|gb|EEU49452.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13]
gi|300833015|gb|EFK63640.1| Fe-S oxidoreductase [Bacteroides sp. 20_3]
Length = 444
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 13/139 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + ++S E A ++ E++ TG
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQEVARKGG--KEIVLTGVN 205
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + +++ L ++ + R S ++P I E I + + + A
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVEGIVRYRISS----IEPNLITDEAIDFVAHSKR---FA 258
Query: 211 IHANHPYEFSEEAIAAISR 229
H + P + +A+ + R
Sbjct: 259 PHFHIPLQSGSDAVLQLMR 277
>gi|228990331|ref|ZP_04150297.1| Radical SAM domain protein [Bacillus pseudomycoides DSM 12442]
gi|228769407|gb|EEM18004.1| Radical SAM domain protein [Bacillus pseudomycoides DSM 12442]
Length = 468
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEV 147
Y + L + H C + C +CF + + ++S + + A+ Y+ + ++
Sbjct: 95 QTYVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDI 154
Query: 148 IFTGGDPLI 156
F GG+PL+
Sbjct: 155 DFFGGEPLM 163
>gi|228996442|ref|ZP_04156083.1| Radical SAM domain protein [Bacillus mycoides Rock3-17]
gi|228763325|gb|EEM12231.1| Radical SAM domain protein [Bacillus mycoides Rock3-17]
Length = 468
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEV 147
Y + L + H C + C +CF + + ++S + + A+ Y+ + ++
Sbjct: 95 QTYVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDI 154
Query: 148 IFTGGDPLI 156
F GG+PL+
Sbjct: 155 DFFGGEPLM 163
>gi|229004086|ref|ZP_04161888.1| Radical SAM domain protein [Bacillus mycoides Rock1-4]
gi|228757184|gb|EEM06427.1| Radical SAM domain protein [Bacillus mycoides Rock1-4]
Length = 468
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEV 147
Y + L + H C + C +CF + + ++S + + A+ Y+ + ++
Sbjct: 95 QTYVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDI 154
Query: 148 IFTGGDPLI 156
F GG+PL+
Sbjct: 155 DFFGGEPLM 163
>gi|168211168|ref|ZP_02636793.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
3626]
gi|169344594|ref|ZP_02865560.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
gi|169297204|gb|EDS79316.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
gi|170710824|gb|EDT23006.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
3626]
Length = 418
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPD---RILLKLLHVCPVYCRFCFR-REMVG 119
KEEL + E+ I + ++ + + L L C + C +C++ + +
Sbjct: 47 KEELKSMGFSLENNINEIELMKCTLNKGKFSEKSMTLFLSLTRQCNLNCSYCYQDKRKMM 106
Query: 120 SQKGTVLSSKDTEAALAYIQEKS-QIWEVIFT--GGDPLILSHKRLQKVLKTLRYIKH 174
++ + L+ D ++++KS + E+ T GG+PL+ LQ ++ L +K+
Sbjct: 107 DKENSFLNKNDWFKIFEFLKKKSVNLNELHITLFGGEPLLNKSIILQ-IIDDLNSLKN 163
>gi|197119727|ref|YP_002140154.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
gi|197089087|gb|ACH40358.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase,
DUF3463-containing protein [Geobacter bemidjiensis Bem]
Length = 332
Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 70/189 (37%), Gaps = 31/189 (16%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +YP ++L+ H+C + C C R ++S + L + E V
Sbjct: 23 IEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS---LKQCLDSVDECPAPV-VTI 78
Query: 150 TGGDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGG+P + H + ++KVL+ KH+ + + ++ + + +
Sbjct: 79 TGGEPFLYPHIFQLIEKVLER---GKHIYLC-----TNALLLEKALDSM-----KPHPNL 125
Query: 208 YIAIHANHPYEFSE-------EAIAAISRLANA---GIILLSQSVLLKGINDDPEILANL 257
I +H + E + A+S + A G L + + + K D + L
Sbjct: 126 VINVHMDGMEETHDRILERPGTFKIAMSAIRKAKQLGFRLCTNTTIFK--ETDLIEIEML 183
Query: 258 MRTFVELRI 266
++ +
Sbjct: 184 FSHLKDIGV 192
>gi|315608055|ref|ZP_07883048.1| 2-methylthioadenine synthetase [Prevotella buccae ATCC 33574]
gi|315250524|gb|EFU30520.1| 2-methylthioadenine synthetase [Prevotella buccae ATCC 33574]
Length = 450
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 20/153 (13%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQE 140
S R LK+ C +C +C + R + L + EAAL
Sbjct: 143 SFQPSCSRGNRTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVEQAREAALE---- 198
Query: 141 KSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
E++ TG GD +H+ ++K L ++ ++ R S ++P + EL+
Sbjct: 199 --GGREIVLTGVNIGDFGATTHESFLDLVKALDEVEGIERFRISS----LEPDLCSDELV 252
Query: 198 QCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
+ H + P S+E + + R
Sbjct: 253 EY---CSISRAFMPHFHIPLQSGSDEVLKLMHR 282
>gi|307295474|ref|ZP_07575310.1| molybdenum cofactor biosynthesis protein A [Sphingobium
chlorophenolicum L-1]
gi|306878513|gb|EFN09733.1| molybdenum cofactor biosynthesis protein A [Sphingobium
chlorophenolicum L-1]
Length = 341
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C M K VL+ ++ A LA + + + TGG+PL+
Sbjct: 31 VTDRCDLRCRYCMAERMTFLPKDQVLTLEEI-ALLADLFIARGVRRIRLTGGEPLVRRD 88
>gi|291550955|emb|CBL27217.1| Organic radical activating enzymes [Ruminococcus torques L2-14]
Length = 216
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 7/119 (5%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ + C + C +C M ++ + E L Y+ E I V TGG+P
Sbjct: 19 ELAVFIRFKGCNLRCSYC--DTMWANEPDCQYKEETPEEILNYVLET-GIRNVTLTGGEP 75
Query: 155 LILSHKRLQKVLKTLRYIK-HVQILRFHS-RVPIVDPQRINPELIQCLKEAGKPVYIAI 211
L+ +++++ L V+I + + +R + L +G Y+
Sbjct: 76 LLQKD--IRELIHLLLQAGLQVEIETNGAVDLSAFCEERPVFTMDYKLPSSGCEEYMIT 132
>gi|291448192|ref|ZP_06587582.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291351139|gb|EFE78043.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 493
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 20/146 (13%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT----- 150
+KL C C FC GS S D ++ E + EV+
Sbjct: 189 VASVKLASGCDRRCSFCAIPSFRGSFISRRPS--DVLQETRWLAE-QGVKEVMLVSENNT 245
Query: 151 --GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PV 207
G D + + L+ +L L + ++ +R + P + P LI L K
Sbjct: 246 SYGKD--LGDIRLLETLLPELADVDGIERIRV----SYLQPAEMRPGLIDVLTSTPKVAP 299
Query: 208 YIAIHANHPYEFSEEAIAAISRLANA 233
Y + H S + + R +
Sbjct: 300 YFDLSFQHS---SPSVLRTMRRFGDT 322
>gi|239944734|ref|ZP_04696671.1| hypothetical protein SrosN15_27314 [Streptomyces roseosporus NRRL
15998]
gi|239991198|ref|ZP_04711862.1| hypothetical protein SrosN1_28096 [Streptomyces roseosporus NRRL
11379]
Length = 466
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 20/146 (13%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT----- 150
+KL C C FC GS S D ++ E + EV+
Sbjct: 162 VASVKLASGCDRRCSFCAIPSFRGSFISRRPS--DVLQETRWLAE-QGVKEVMLVSENNT 218
Query: 151 --GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PV 207
G D + + L+ +L L + ++ +R + P + P LI L K
Sbjct: 219 SYGKD--LGDIRLLETLLPELADVDGIERIRV----SYLQPAEMRPGLIDVLTSTPKVAP 272
Query: 208 YIAIHANHPYEFSEEAIAAISRLANA 233
Y + H S + + R +
Sbjct: 273 YFDLSFQHS---SPSVLRTMRRFGDT 295
>gi|218667518|ref|YP_002425957.1| nitrogenase cofactor biosynthesis protein NifB [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|218519731|gb|ACK80317.1| nitrogenase cofactor biosynthesis protein NifB [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 499
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 64/219 (29%), Gaps = 38/219 (17%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + + LA Q+
Sbjct: 49 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAAKKVLAVASTIPQM 108
Query: 145 WEVIFTG-GDPL---------------ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ G GDPL +L L HV + VD
Sbjct: 109 TVLGIAGPGDPLANPEKTFKTFELISKTAPDIKLCLSTNGLALPDHVDTIA----RFNVD 164
Query: 189 PQRINPELIQCLKEAGKPVY-IAIHAN-------HPYEFSEEAIAAISRLANAGIILLSQ 240
I ++ G +Y + N ++ + + L GI+
Sbjct: 165 HVTITINMVDA--NVGAQIYPWIFYKNKRYKGREAAQILTDRQMQGLEMLTERGILCKVN 222
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
SV++ GIND + R + + A
Sbjct: 223 SVMIPGINDHHLVEV--NRAVKSRGAFLHNIMPLISAPE 259
>gi|205356587|ref|ZP_03223350.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. jejuni CG8421]
gi|205345592|gb|EDZ32232.1| molybdenum cofactor biosynthesis protein A [Campylobacter jejuni
subsp. jejuni CG8421]
Length = 320
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 101 LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C + K +LS ++ +AA+ I ++ TGG+PL
Sbjct: 17 VTQRCNFRCLYCMPKIPFDYQPKENLLSFEELFLFVKAAID-----EGIEKIRITGGEPL 71
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L +K + K L +
Sbjct: 72 LRKD--LSIFIKMINDYKSDIDLAITTNGF 99
>gi|198283369|ref|YP_002219690.1| nitrogenase cofactor biosynthesis protein NifB [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198247890|gb|ACH83483.1| nitrogenase cofactor biosynthesis protein NifB [Acidithiobacillus
ferrooxidans ATCC 53993]
Length = 522
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 64/219 (29%), Gaps = 38/219 (17%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + + LA Q+
Sbjct: 72 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAAKKVLAVASTIPQM 131
Query: 145 WEVIFTG-GDPL---------------ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ G GDPL +L L HV + VD
Sbjct: 132 TVLGIAGPGDPLANPEKTFKTFELISKTAPDIKLCLSTNGLALPDHVDTIA----RFNVD 187
Query: 189 PQRINPELIQCLKEAGKPVY-IAIHAN-------HPYEFSEEAIAAISRLANAGIILLSQ 240
I ++ G +Y + N ++ + + L GI+
Sbjct: 188 HVTITINMVDA--NVGAQIYPWIFYKNKRYKGREAAQILTDRQMQGLEMLTERGILCKVN 245
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
SV++ GIND + R + + A
Sbjct: 246 SVMIPGINDHHLVEV--NRAVKSRGAFLHNIMPLISAPE 282
>gi|153868712|ref|ZP_01998465.1| radical SAM family protein [Beggiatoa sp. PS]
gi|152074705|gb|EDN71535.1| radical SAM family protein [Beggiatoa sp. PS]
Length = 321
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
+ ++ I D + + L ++C C C G + +++ +
Sbjct: 1 MLATLPLLKNTDFPAIERNSLDTLQVNLGYLCNQQCLHCHVNA--GPNRIEIMTRETCNQ 58
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK-HV 175
L Y++ I + FTGG P + + + ++T R + HV
Sbjct: 59 ILDYLRATPSIQTLDFTGGAPEL--NPHFRYFVETARQLDVHV 99
>gi|332526652|ref|ZP_08402757.1| molybdenum cofactor biosynthesis protein A [Rubrivivax
benzoatilyticus JA2]
gi|332110913|gb|EGJ11090.1| molybdenum cofactor biosynthesis protein A [Rubrivivax
benzoatilyticus JA2]
Length = 372
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 101 LLHVCPVYCRFCFR-----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C R +LS ++ + + ++ TGG+PL
Sbjct: 46 VTDRCNFRCGYCMPSEVFDRRYRFLPHDALLSFEEITRVASVFLAH-GVRKLRLTGGEPL 104
Query: 156 ILSHKRLQKVLKTLRYIKHV 175
+ K+L +++ L ++ V
Sbjct: 105 LR--KQLPSLVEQLAALRTV 122
>gi|153855577|ref|ZP_01996693.1| hypothetical protein DORLON_02711 [Dorea longicatena DSM 13814]
gi|149751998|gb|EDM61929.1| hypothetical protein DORLON_02711 [Dorea longicatena DSM 13814]
Length = 321
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 64/171 (37%), Gaps = 19/171 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C + +L+ ++ + + I ++ TGG+PL+ K
Sbjct: 16 ITDRCNLRCRYCMPDGITQVSMAEILTYEEIRKVC-ILAAELGIQKIKITGGEPLVR--K 72
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAI-HANHP 216
++ ++ I + + + ++ ++ LK+AG + +
Sbjct: 73 GCADLIGMIKNILGITQVTMTTNGVLLQDN------LEALKKAGLDGINISLDTLDREKY 126
Query: 217 YEFS-----EEAIAAISRLANAGIILLSQSVLLK-GINDDPEILANLMRTF 261
E + E A++ A +GI +VL G + + L L +
Sbjct: 127 QEITGTDACETVRQAVAAAAESGIRTKVNTVLQSDGDKTEWKALITLAESL 177
>gi|51891767|ref|YP_074458.1| hypothetical protein STH629 [Symbiobacterium thermophilum IAM
14863]
gi|51855456|dbj|BAD39614.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 369
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 61/207 (29%), Gaps = 27/207 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + + + C + CR C E + + L L ++ + + TGG+ L
Sbjct: 27 VEITVTNWCNLRCRHCAVGESLMDRDPERLPLDLILRRLDEVEGLTTLS---LTGGE-LS 82
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRV-------------PIVDPQRINPELIQCLKEA 203
S + L++ + L + ++V + +
Sbjct: 83 GSTEVLRRWVAPLLQYA--KRRGLQTQVNTNLTFDLGRYEEIAPWVDVFHITWNYRDEAH 140
Query: 204 GKPVYIAIHANHPYEFSEEA-IAAISRLANAGIILLSQSVLLKGIN----DDPEILANLM 258
+ E S EA R+ + L +Q + + + L +
Sbjct: 141 FHRIVWGHG---SREVSPEASRRLFRRIIDNARALAAQGRFVSAETMINAETADHLGAMN 197
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRL 285
R E+ + + +H S +
Sbjct: 198 RFLAEIGCRRHEVHPMYAVDWASDLPV 224
>gi|291548154|emb|CBL21262.1| RNA modification enzyme, MiaB family [Ruminococcus sp. SR1/5]
Length = 375
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 60/152 (39%), Gaps = 28/152 (18%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
R +K+ C +C +C + + S++ E+ L ++ + EV+ TG
Sbjct: 79 RAYIKVQDGCNQFCTYC-----IIPYARGRVRSRNIESVLKEVRALAEKGYKEVVLTG-- 131
Query: 154 PLILSH----------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ LS + L +++ + I+ ++ +R S ++P + E + +
Sbjct: 132 -IHLSSYGVDFPEEKKETLLSLIRAVHEIEGIRRIRLGS----LEPGIVTREFAEGIAAL 186
Query: 204 GKPVYIAIHAN-HPYEFSEEAIAAISRLANAG 234
K + H + +E + ++R +G
Sbjct: 187 PK---VCPHFHLSLQSGCDETLERMNRRYRSG 215
>gi|262341203|ref|YP_003284058.1| radical SAM domain-containing protein [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272540|gb|ACY40448.1| radical SAM domain-containing protein [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 201
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 13/122 (10%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y C + C +C +E +K + + +I + ++ TGG
Sbjct: 20 YGMAAFFIRFEGCNIKCDWCDTKESWKIKKKDFIP---IHEIINHI-SNYTVKNIVITGG 75
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+P++ + L K+LK + R H P I + + + + K + + +
Sbjct: 76 EPMMWNLYHLTKILKK-------KGYRIHVETSGTYP--IEEKYMDWITVSPKKIKLPLE 126
Query: 213 AN 214
N
Sbjct: 127 EN 128
>gi|295402407|ref|ZP_06812361.1| Radical SAM domain protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|312112044|ref|YP_003990360.1| radical SAM protein [Geobacillus sp. Y4.1MC1]
gi|294975570|gb|EFG51194.1| Radical SAM domain protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217145|gb|ADP75749.1| Radical SAM domain protein [Geobacillus sp. Y4.1MC1]
Length = 373
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 61/177 (34%), Gaps = 18/177 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKRLIDDIYEMEQPL-LVFTGGD 65
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPIVDPQRINPELIQCLKEAGKPVYIA 210
PL+ + L + LR S P V + I L +
Sbjct: 66 PLMRPD------VFELAKYAIDKGLRVSMTPSATPNVTKEAIRKAKEIGLSRWAFSLDGP 119
Query: 211 IHANH------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
H P F I AI L I + +V+ + + +A L+
Sbjct: 120 NAEIHDRFRGMPGSFD-LTIKAIEYLHELDIPVQINTVISRYNVHALDEMAKLVEKL 175
>gi|254456428|ref|ZP_05069857.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083430|gb|EDZ60856.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Pelagibacter
sp. HTCC7211]
Length = 442
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 42/110 (38%), Gaps = 9/110 (8%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--PL 155
L + C +C FC G + L + Y+ + E++ G +
Sbjct: 151 FLTIQEGCDKFCHFCVVPYTRGPEYSRPL--EQILDEAKYLADNGA-QEIVLLGQNVNAY 207
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+L ++ + I ++ +R+ + P+ ++ +LI+ K + K
Sbjct: 208 SYEQNKLSNLIFEIEKIPQIKRIRYTTS----HPKDMSDDLIKVYKSSKK 253
>gi|187778355|ref|ZP_02994828.1| hypothetical protein CLOSPO_01947 [Clostridium sporogenes ATCC
15579]
gi|187771980|gb|EDU35782.1| hypothetical protein CLOSPO_01947 [Clostridium sporogenes ATCC
15579]
Length = 446
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLIL 157
+ H C + C++CF E K ++S + + A+ ++ EKS EV GG+PL +
Sbjct: 92 IAHDCNLRCKYCFADEGEYKGKRELMSPQIGKKAIDFVIEKSGPRKNIEVDLFGGEPL-M 150
Query: 158 SHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ ++++++ + + H + +RF + +N E+++ L + + + +
Sbjct: 151 AFSTIKEIVEYAKEQEKKHNKTIRFT---MTTNGTLLNKEIMEYLDKNMGNIVL--SIDG 205
Query: 216 PYEFSEEAIAAIS 228
E ++ +
Sbjct: 206 RKEINDNVRVRVD 218
>gi|319940618|ref|ZP_08014961.1| hypothetical protein HMPREF9464_00180 [Sutterella wadsworthensis
3_1_45B]
gi|319805984|gb|EFW02742.1| hypothetical protein HMPREF9464_00180 [Sutterella wadsworthensis
3_1_45B]
Length = 402
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R L++L ++C CR+C R+ K ++ ++ A + + V G+
Sbjct: 60 RGLIELSNICTANCRYCGIRKANHDVKRYTMTKEEIVEAAVW-AADNGYGSVCLQAGE-- 116
Query: 156 ILSHKR-LQKVLKTLRYIKHVQILR 179
++ ++ + + LR I H++ R
Sbjct: 117 -RRDEKFIEFICECLREI-HLRTKR 139
>gi|240145227|ref|ZP_04743828.1| molybdenum cofactor biosynthesis protein A [Roseburia intestinalis
L1-82]
gi|257202691|gb|EEV00976.1| molybdenum cofactor biosynthesis protein A [Roseburia intestinalis
L1-82]
Length = 345
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C++C ++ + +L+ ++ I + TGG+PL+
Sbjct: 16 ITDRCNLRCKYCMPGDIETTDMENLLTYEEIVQVTET-AAALGIRHIRLTGGEPLVRRGC 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVP 185
+++ ++ + ++ + +
Sbjct: 75 V--DLVEKIKNVSGIETVGMTTNGV 97
>gi|153953013|ref|YP_001393778.1| Fe-S oxidoreductase [Clostridium kluyveri DSM 555]
gi|219853669|ref|YP_002470791.1| hypothetical protein CKR_0326 [Clostridium kluyveri NBRC 12016]
gi|146345894|gb|EDK32430.1| Predicted Fe-S oxidoreductase [Clostridium kluyveri DSM 555]
gi|219567393|dbj|BAH05377.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 330
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 29/212 (13%), Positives = 74/212 (34%), Gaps = 39/212 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + C + C+ C+R GS+ L++ + + + I++ + +IF+GG+PL+
Sbjct: 3 ISWNTTNKCNMRCKHCYRNA--GSEVEGELNTLEAKKLIEDIKK-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR----FHSRVPIVDPQRINPELIQCLKEAGKPVYIAI- 211
+ L I+H + S ++ R ++ G + +
Sbjct: 60 RKD------IFEL--IEHAAKCKLRPVLGSNGTLI--TRETAAKLKAAGAMGIGISLDSL 109
Query: 212 HANHPYEF------SEEAIAAISRLANAGIILLSQSVLLK-GINDDPEILANLMRTFVEL 264
++N +F ++ I + G+ + ++ + +I V++
Sbjct: 110 NSNKHNQFRGLSTGWQDTIKGMENCREVGLGFQVHTTVMDWNFEEILDITDFA----VKI 165
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+++ F + + I
Sbjct: 166 GASAHHIF----------FIVPTGRAKNIQHE 187
>gi|325981206|ref|YP_004293608.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Nitrosomonas sp. AL212]
gi|325530725|gb|ADZ25446.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Nitrosomonas sp. AL212]
Length = 442
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 21/132 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
+ ++ C YC FC V S+ + L I I E+ G +
Sbjct: 148 TAFVSIMEGCSKYCSFC-----VVPYTRGEEVSRPLDDVLTEIAVLAAQGIKEITLLGQN 202
Query: 154 P----LILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+++ + L+ L I ++ +R+ + P+ LIQ + K
Sbjct: 203 VNAYLGMMNDGEIADFALLLEYLHDIPGIERIRYTTS----HPKEFTTRLIQAYNQLPK- 257
Query: 207 VYIAIHANHPYE 218
+ H + P +
Sbjct: 258 --LVNHLHLPVQ 267
>gi|307823808|ref|ZP_07654036.1| nitrogenase cofactor biosynthesis protein NifB [Methylobacter
tundripaludum SV96]
gi|307735102|gb|EFO05951.1| nitrogenase cofactor biosynthesis protein NifB [Methylobacter
tundripaludum SV96]
Length = 496
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 54/186 (29%), Gaps = 26/186 (13%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H Y R+ + + C + C +C R+ G + + + +A Q+
Sbjct: 50 HHYFARMHVAVAPACNIQCHYCNRKYDCSNESRPGVVSEVLTPDQAVKKTMAVAATIPQM 109
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI------------VDPQR 191
+ G GDPL + + + +++ + +D
Sbjct: 110 TVLGIAGPGDPLANPERTFETFRRLSEEAPDIKLC-VSTNGLALPDSVEELSKHNIDHVT 168
Query: 192 INPELIQ------CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
I + ++ + L GI++ SV++
Sbjct: 169 ITINCVDPEIGAKIYPWIYWNNKRITGVKAAKILIQQQQKGLEMLIAKGILVKVNSVMIP 228
Query: 246 GINDDP 251
GIND
Sbjct: 229 GINDQH 234
>gi|297200519|ref|ZP_06917916.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC
29083]
gi|297147672|gb|EFH28704.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC
29083]
Length = 401
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIW-----EVIF 149
LLK+ C + C +C+ E V + ++ A A I E ++ +V+
Sbjct: 8 LLKIHSRCNLACDYCYVYESVDQSWRDRPRTMAPGVVRRAAALIAEHAREHALSEVQVVL 67
Query: 150 TGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GG+PL++ +RL VL+ L + V LR + + +P L+ L G V
Sbjct: 68 HGGEPLLVGAERLDAVLRELAGALDGVAELRLNLQTN-GLRLVEDPALLPVLARHGVRVG 126
Query: 209 I 209
+
Sbjct: 127 V 127
>gi|184200236|ref|YP_001854443.1| molybdenum cofactor biosynthesis protein A [Kocuria rhizophila
DC2201]
gi|183580466|dbj|BAG28937.1| molybdenum cofactor biosynthesis protein MoaA [Kocuria rhizophila
DC2201]
Length = 343
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 35/217 (16%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + + ++LS + + + E+ TGG+PLI
Sbjct: 22 ITDKCNLRCTYCMPAEGMKWLPRESLLSVAEIVRLAGIAVAEFGVREIRLTGGEPLIRPD 81
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L++++ +L H+ +P + + + + G N
Sbjct: 82 --LEELVGSL-----------HATLPGIPVSMTSNGIGLAARAQGLADAGMTRVN--VSL 126
Query: 220 SEEAIAAISRLANAG-----------------IILLSQSVLLKGINDDPEILANLMRTFV 262
+RLA G + +VL++G+N+ L+ +
Sbjct: 127 DTLCAETYARLARRGRLTEALEGVAAARRAGMSPVKINAVLMRGVNE--REAPELLHWAL 184
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
E ++ L A R + +I SL
Sbjct: 185 ENECDLRFIEQMPLDADHGWTRENMVTAAQIRQSLSR 221
>gi|304406644|ref|ZP_07388299.1| Radical SAM domain protein [Paenibacillus curdlanolyticus YK9]
gi|304344177|gb|EFM10016.1| Radical SAM domain protein [Paenibacillus curdlanolyticus YK9]
Length = 378
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 11/107 (10%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKL-------LHVCPVYCRFCFRREMVGSQKGTVLS 127
D I + ++ ++P+ I + +VC VYCRFC GS++G VL
Sbjct: 28 SDEIEKMGQVANQIMLRKHPEPITTFVVGRNVNYTNVCDVYCRFCAFYRAPGSKEGYVLP 87
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
++ + E++ GG LR IK
Sbjct: 88 NETIMQKIQE-TVDVGGTEILMQGG---TNPDLPFSYYTDVLREIKQ 130
>gi|303231379|ref|ZP_07318113.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
atypica ACS-049-V-Sch6]
gi|302513975|gb|EFL55983.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
atypica ACS-049-V-Sch6]
Length = 268
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + + + ++ VI
Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+G DPL L +L++++ I ++
Sbjct: 140 ESGEDPLNNP---LDYILESIKTIYSIKNK 166
>gi|291541305|emb|CBL14416.1| molybdenum cofactor biosynthesis protein A, bacterial [Roseburia
intestinalis XB6B4]
Length = 345
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C++C ++ + +L+ ++ I + TGG+PL+
Sbjct: 16 ITDRCNLRCKYCMPGDIETTDMENLLTYEEIVQVTE-AAAALGIRHIRLTGGEPLVRRGC 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVP 185
+++ ++ + ++ + +
Sbjct: 75 V--DLVEKIKNVSGIETVGMTTNGV 97
>gi|224372902|ref|YP_002607274.1| hypothetical protein NAMH_0871 [Nautilia profundicola AmH]
gi|223589641|gb|ACM93377.1| conserved hypothetical protein [Nautilia profundicola AmH]
Length = 408
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 14/142 (9%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+GD + K I + +K+ C C +C + G L +
Sbjct: 110 LGDFDFINQKIITEYTKAKAFVKIQEGCDFECAYCIIPSVRG--HSRSLPENIILEQIKT 167
Query: 138 IQEKSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ + I E + TG D ++ L ++++ + I+ V+ +R S P +
Sbjct: 168 LSQN-GISEFVLTGINMGSYGKD----TNTTLSELIEKISKIRGVKRIRLGSLEPSQLDE 222
Query: 191 RINPELIQCLKEAGKPVYIAIH 212
R+ + E + +
Sbjct: 223 RLIELTQNGILEKHLHIALQHT 244
>gi|18313817|ref|NP_560484.1| molybdenum cofactor biosynthesis protein (moaA) [Pyrobaculum
aerophilum str. IM2]
gi|18161379|gb|AAL64666.1| molybdenum cofactor biosynthesis protein (moaA) [Pyrobaculum
aerophilum str. IM2]
Length = 254
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 104 VCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C + C C+ R G ++ + A L I + +V +GG+PLI
Sbjct: 46 GCNLRCGMCWAWRNTSFVLTAGAWMAPHEVAARLREIAKSKGFQQVRISGGEPLIAPEHL 105
Query: 162 LQ 163
L+
Sbjct: 106 LE 107
>gi|296123552|ref|YP_003631330.1| molybdenum cofactor biosynthesis protein A [Planctomyces
limnophilus DSM 3776]
gi|296015892|gb|ADG69131.1| molybdenum cofactor biosynthesis protein A [Planctomyces
limnophilus DSM 3776]
Length = 333
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 101 LLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C V + +L+ ++ + I I V TGG+PL+
Sbjct: 18 VTDRCNIRCFYCMPEGPVQYLPRQHLLTYEEITELVK-IFVSLGIDRVRLTGGEPLVRQD 76
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
L ++K+L+ I + + + ++ Q
Sbjct: 77 --LPVLIKSLKAIDGLVDIGLTTNGILLADQ 105
>gi|256389735|ref|YP_003111299.1| radical SAM domain-containing protein [Catenulispora acidiphila DSM
44928]
gi|256355961|gb|ACU69458.1| Radical SAM domain protein [Catenulispora acidiphila DSM 44928]
Length = 815
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 77/232 (33%), Gaps = 49/232 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-------AALAYIQEKSQIWEV--I 148
+LK+ C + C C+ E E + + + V I
Sbjct: 13 ILKVHSRCDLACNHCYMYEGADQSWQARPKVMSLETAERIGGRIADHARRH-GVDSVRLI 71
Query: 149 FTGGDPLILSHKRLQKVLKTLRY-IKHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
GG+PL+ ++L+ ++ LR + + +R H+ R++ + +
Sbjct: 72 LHGGEPLLAGTEQLEGIILRLRKVLDGITADIRVHTNAV-----RLDARFLDLFVKHDVR 126
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
V +++ RLAN L S G P++ A L + R
Sbjct: 127 VGVSLDG--------------DRLANDRHRLYS-----DGRTSHPQVRAAL--ALLR-RP 164
Query: 267 KPYYLHHPDLAAGTSHFRLTIE-EGQKIVASLKEKIS---GLCQPFYILDLP 314
+ +L+ L + I + + +L + GL P D+P
Sbjct: 165 EYEHLYSGILCT------VDIANDAIAVYEALLAEKPPRIGLLLPHATWDIP 210
>gi|261343456|ref|ZP_05971101.1| molybdenum cofactor biosynthesis protein A [Providencia rustigianii
DSM 4541]
gi|282568603|gb|EFB74138.1| molybdenum cofactor biosynthesis protein A [Providencia rustigianii
DSM 4541]
Length = 326
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 28/84 (33%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C S + L+ + +V TGG+P +
Sbjct: 19 ITDVCNFRCTYCLPDGYKPSGRHEFLTLDEIRRVSRAF-ADLGTEKVRITGGEPTMRKD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ +R + ++ + +
Sbjct: 77 -FSDIIAAIRENQSIKKIAVTTNG 99
>gi|291534464|emb|CBL07576.1| molybdenum cofactor biosynthesis protein A, bacterial [Roseburia
intestinalis M50/1]
Length = 345
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C++C ++ + +L+ ++ I + TGG+PL+
Sbjct: 16 ITDRCNLRCKYCMPGDIETTDMENLLTYEEIVQVTE-AAAALGIRHIRLTGGEPLVRRGC 74
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVP 185
+++ ++ + ++ + +
Sbjct: 75 V--DLVEKIKNVSGIETVGMTTNGV 97
>gi|222479641|ref|YP_002565878.1| Radical SAM domain protein [Halorubrum lacusprofundi ATCC 49239]
gi|222452543|gb|ACM56808.1| Radical SAM domain protein [Halorubrum lacusprofundi ATCC 49239]
Length = 367
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R P ++ ++ C + CR C LS+++ + L V+ +G
Sbjct: 9 RRPLVLIWEVTQACGLACRHCRADAKPARHPDE-LSTEEGKRLLNDAATFGDGQLVVLSG 67
Query: 152 GDPLILSHKRLQ 163
GDPL L+
Sbjct: 68 GDPL-ARDDLLE 78
>gi|325282230|ref|YP_004254772.1| glycyl-radical enzyme activating protein family [Odoribacter
splanchnicus DSM 20712]
gi|324314039|gb|ADY34592.1| glycyl-radical enzyme activating protein family [Odoribacter
splanchnicus DSM 20712]
Length = 260
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 73/204 (35%), Gaps = 38/204 (18%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREM-----VGSQKGTVLSSKDTEAA---------- 134
+H P L C ++CR+C E V ++ L ++ E
Sbjct: 13 IHDGPGIRTTVFLKGCRLHCRWCHNPESQAVGTVSMKQVRKLGDREFEEIRKVGYGISVD 72
Query: 135 --LAYIQEKSQIWE-----VIFTGGDPLILSHKRLQKVLK--TLRYIKH--VQILRFHSR 183
+ I + + +E V F+GG+PL+ L+ LK R I H + S
Sbjct: 73 ELVEEIAKDAVFFEESGGGVTFSGGEPLLQPVFLLE-CLKACKARRI-HTCIDTAGVASG 130
Query: 184 VPIVDPQRINPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+ + R + +K A YI EA + ++A G ++ +
Sbjct: 131 AYLEEICRYTDLFLYDVKTADPQKFEAYIGKGF-------REACEHLRKIAGQGAGVIVR 183
Query: 241 SVLLKGINDDPEILANLMRTFVEL 264
++ G NDD + + +R +
Sbjct: 184 IPVIPGFNDDKKSVQETIRFLQTM 207
>gi|308447253|ref|XP_003087376.1| hypothetical protein CRE_13873 [Caenorhabditis remanei]
gi|308256935|gb|EFP00888.1| hypothetical protein CRE_13873 [Caenorhabditis remanei]
Length = 404
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 3/106 (2%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ ++ + L C C +C K +LS ++ + + I ++ T
Sbjct: 38 QRHKRKLRISLTDRCNFKCSYCMPDHPSWLAKQDILSFEELYRFCEVMIK-LGITQIRLT 96
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
GG+PL+ K L + TL ++ + + R ++ EL
Sbjct: 97 GGEPLMR--KGLVNFIYTLNTLRPLGLQRVSMTTNAYYLEKYAVEL 140
>gi|281356064|ref|ZP_06242557.1| biotin and thiamin synthesis associated protein [Victivallis
vadensis ATCC BAA-548]
gi|281317433|gb|EFB01454.1| biotin and thiamin synthesis associated protein [Victivallis
vadensis ATCC BAA-548]
Length = 472
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 8/129 (6%)
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVL 126
+ D I + Y +RI++ + C C +C + L
Sbjct: 58 ECDLPDEIEKMFELAREIKQKFYGNRIVMFAPLYLSNYCINGCTYCPYHRSNTHIRRKKL 117
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHS 182
+ ++ A + +Q+ + TG DP + + + +KT+ IKH ++ + +
Sbjct: 118 TQEEIAAEVVALQDMGHKRLALETGEDPKNNPIEYVLESIKTIYSIKHKNGAIRRVNVNI 177
Query: 183 RVPIVDPQR 191
V+ R
Sbjct: 178 AATTVENYR 186
>gi|240172941|ref|ZP_04751599.1| radical SAM domain-containing protein [Mycobacterium kansasii ATCC
12478]
Length = 514
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 11/154 (7%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P K + P DPI L + ++ +L + C + C CF +
Sbjct: 80 PTKAHIPDTP-GNFDPIPSAYLRGLPQMQTQHTCILLEDIAETCNLRCPTCFADSSPDLR 138
Query: 122 KGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + L +E ++ ++ +GG+P + +L ++L L + +
Sbjct: 139 HVVAIGDVLANVDQRLE--RENGRLDVLMLSGGEPSLHP--QLPELLAELSARP-ITRIL 193
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
++ V + L+ L E + + +
Sbjct: 194 LNTNGIRVAQ---DDGLLDVLTEHRERAEVYLQY 224
>gi|255655733|ref|ZP_05401142.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
QCD-23m63]
gi|296451740|ref|ZP_06893471.1| molybdenum cofactor biosynthesis protein A [Clostridium difficile
NAP08]
gi|296878984|ref|ZP_06902982.1| molybdenum cofactor biosynthesis protein A [Clostridium difficile
NAP07]
gi|296259441|gb|EFH06305.1| molybdenum cofactor biosynthesis protein A [Clostridium difficile
NAP08]
gi|296430011|gb|EFH15860.1| molybdenum cofactor biosynthesis protein A [Clostridium difficile
NAP07]
Length = 319
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
++ +Y +I L C + C +C + + LS +D + + + E
Sbjct: 1 MIDKYGRKIDYLRISLTDKCNLRCVYCMPPDVKFDKNYINENLSFEDYKFIIKAMAE-QG 59
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
I +V FTGG+PL+ +L +++K + + + + I RI
Sbjct: 60 ITKVRFTGGEPLLYP--KLNELIKFTKEECGINNIGMTTNA-IGLSDRILE 107
>gi|238794064|ref|ZP_04637681.1| Molybdenum cofactor biosynthesis protein A [Yersinia intermedia
ATCC 29909]
gi|238726569|gb|EEQ18106.1| Molybdenum cofactor biosynthesis protein A [Yersinia intermedia
ATCC 29909]
Length = 326
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + LS + ++ TGG+P +
Sbjct: 19 ITDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRVSRAF-ALLGTEKIRLTGGEPSMRRD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ T+R ++ L +
Sbjct: 77 -FSDIIATIRQNPAIRTLAVTTNG 99
>gi|222112105|ref|YP_002554369.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acidovorax
ebreus TPSY]
gi|221731549|gb|ACM34369.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidovorax ebreus TPSY]
Length = 448
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 89/285 (31%), Gaps = 52/285 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG--- 151
+ ++ C YC +C G + E L + + EV G
Sbjct: 147 AFVSIMEGCSKYCSYCVVPYTRGEEVSRPF-----EDVLVEVAGLADQGVREVTLLGQNV 201
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
GD + L +L+ + I ++ +RF + P P LI+ +
Sbjct: 202 NAYLGAMGDTAEKADFAL--LLEYVAEIPGIERIRFTTS----HPNEFTPRLIEAYAKIP 255
Query: 205 KPVYIAIHANHPYE-------------FSE-EAIAAISRLANAGIILLSQSVLLKGI-ND 249
K + H + P + ++ E + I +L + S + G +
Sbjct: 256 K---LVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTIRKLRAIRPDMAMSSDFIVGFPGE 312
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTS----HFRLTIEEGQKIVASLKEKISGLC 305
E +M+ ++R + GT H E + + L+ I+
Sbjct: 313 TEEDFQKMMKLIDDVRFDNSFSFIFSPRPGTPAANLHDDTPHEVKLRRLQELQAVIN--- 369
Query: 306 QPFYILDLPGG-YGKV-KIDTHNIKKVGNGSYCITDHHNIVHDYP 348
IL++ G V ++ + K N V ++P
Sbjct: 370 --RNILEISQERVGTVQRLLVEGVSKRDGSELMGRTECNRVVNFP 412
>gi|114571255|ref|YP_757935.1| GTP cyclohydrolase subunit MoaA [Maricaulis maris MCS10]
gi|114341717|gb|ABI66997.1| GTP cyclohydrolase subunit MoaA [Maricaulis maris MCS10]
Length = 339
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C + + K +LS ++ A + + +V TGG+PL+
Sbjct: 28 VTDRCDLRCVYCMKAKPTFLPKKDLLSLEELTAVCDTFIAR-GVTKVRLTGGEPLVRKD 85
>gi|325262830|ref|ZP_08129566.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
gi|324031924|gb|EGB93203.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
Length = 440
Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 55/149 (36%), Gaps = 15/149 (10%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
E D + PL+ R +K+ C +C +C G + + D
Sbjct: 130 REMLDINHTKEYEPLRLSKTGEHTRAYIKVQDGCNQFCSYCIIPFARGRVRSR--AKADV 187
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRYIKHVQILRFHSR 183
+ + E EV+ TG + LS + L +++ + ++ ++ +R S
Sbjct: 188 LEEVRRLAENGY-QEVVLTG---IHLSSYGIDLEETESLLSLIRAVHEVRGIRRIRLGSL 243
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIH 212
P + + EL L++ ++++
Sbjct: 244 EPRIITEEFVQELAS-LEKICPHFHLSLQ 271
>gi|26989205|ref|NP_744630.1| molybdenum cofactor biosynthesis protein A, putative [Pseudomonas
putida KT2440]
gi|24984046|gb|AAN68094.1|AE016441_6 molybdenum cofactor biosynthesis protein A, putative [Pseudomonas
putida KT2440]
Length = 322
Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ L C C +C L++ A+ +++ + + E+ T
Sbjct: 8 RRFRKLRLSL-TAACNYACTYCVADGRRLVAARDELTAASMLRAVELLRDVAGVEELRIT 66
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
GG+PL LS RL+ L+ + + +Q + +
Sbjct: 67 GGEPL-LSD-RLEPFLQGIGKLA-LQDISLTTNG 97
>gi|148263090|ref|YP_001229796.1| radical SAM domain-containing protein [Geobacter uraniireducens
Rf4]
gi|146396590|gb|ABQ25223.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
Length = 332
Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 29/186 (15%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+YP ++L+ H+C + C C R T+ E LA + E V TG
Sbjct: 25 KYPLVLMLEPTHLCNLACSGCGRIR---EYADTIQDMMSLEECLASVDECPAPV-VTITG 80
Query: 152 GDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G+P + + ++++ L KH+ + + ++ + +
Sbjct: 81 GEPFLYP--HIFELIEAVLERGKHIYLC-----TNALLLEKALDNM-----RPHPNFTLN 128
Query: 211 IHANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
IH + E + AI AI + G + + + + K D + L
Sbjct: 129 IHMDGMEETHDRILERKGTFKTAIEAIKKAKKLGFRVCTNTTIFK--ETDLVEIEMLFSR 186
Query: 261 FVELRI 266
E+ +
Sbjct: 187 LQEIGV 192
>gi|160893109|ref|ZP_02073897.1| hypothetical protein CLOL250_00655 [Clostridium sp. L2-50]
gi|156865192|gb|EDO58623.1| hypothetical protein CLOL250_00655 [Clostridium sp. L2-50]
Length = 222
Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ + C + C +C + ++ E YI+ + V TGG+P
Sbjct: 22 ELAVFIRFTGCNLNCSYCDTKWA--NEADAPYEELTDEEIYDYIKRT-GVRNVTLTGGEP 78
Query: 155 LILSHKRLQKVLKTLR 170
LI + K+L L
Sbjct: 79 LIQKD--IDKLLLMLA 92
>gi|320530010|ref|ZP_08031085.1| molybdenum cofactor biosynthesis protein A [Selenomonas artemidis
F0399]
gi|320137746|gb|EFW29653.1| molybdenum cofactor biosynthesis protein A [Selenomonas artemidis
F0399]
Length = 305
Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+LS ++ + + I +V TGG+PL+ + +++ L+ I ++ +
Sbjct: 11 HEDILSYEEILRDVRALAA-LGIRKVRLTGGEPLVRRD--IVTLVRGLKEIPGIETVAVT 67
Query: 182 SRVP 185
+
Sbjct: 68 TNGV 71
>gi|306756314|sp|A5DGI1|LIPA_PICGU RecName: Full=Lipoyl synthase, mitochondrial; AltName: Full=Lipoate
synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoic
acid synthase; Flags: Precursor
gi|190346245|gb|EDK38284.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 385
Score = 38.0 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 24/203 (11%), Positives = 64/203 (31%), Gaps = 37/203 (18%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-----YIQEKSQIWEVIFTGG 152
++ + C CRFC + + ++T A++ Y+ + + + GG
Sbjct: 130 IMLMGDTCTRGCRFCSVKTSRKPAPPDPMEPENTAEAISRWGLGYVVLTTVDRDDLVDGG 189
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
L + ++ ++ + + R + ++ L +G VY
Sbjct: 190 ------AHHLAETVRKIKEKAPQILVEVLGG------DFRGDLDMASVLARSGLDVYAHN 237
Query: 212 HANHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + + R L++++ ++ G + E + +R
Sbjct: 238 -IETVEDLTPHVRDRRATYRQSLSILQRAKETKPSLVTKTSMMLGFGETDEQIMQTLRDL 296
Query: 262 VELRIKPYYLHHPDLAAGTSHFR 284
E++ D+ + R
Sbjct: 297 REIK--------CDVVTFGQYMR 311
>gi|118444753|ref|YP_878562.1| MiaB-like tRNA modifying enzyme [Clostridium novyi NT]
gi|118135209|gb|ABK62253.1| MiaB-like tRNA modifying enzyme [Clostridium novyi NT]
Length = 433
Score = 38.0 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 23/155 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SK+ E + ++ E+I +G
Sbjct: 141 KTRAFLKIQDGCNNFCSYCL-----IPFARGAVCSKNPEIIIDEVKKLAAHGFKEIILSG 195
Query: 152 GDPLILS-----HKRLQKVLKTLRYIKHVQILRFHSRVP-IVDPQRINPELIQCLKEAGK 205
D L +LK + I + +R S P + RI I LK+
Sbjct: 196 IDISSYGVDLEGDWNLLTILKKIDEIDGITRVRIGSIGPEFFNEDRIKE--IGKLKKLCP 253
Query: 206 PVYIAIHANHPYEF--------SEEAIAAISRLAN 232
++++ + +EE + L
Sbjct: 254 HFHLSLQSGCNETLKRMNRKYTTEEFENVVKLLRK 288
>gi|323527295|ref|YP_004229448.1| RNA modification enzyme, MiaB family [Burkholderia sp. CCGE1001]
gi|323384297|gb|ADX56388.1| RNA modification enzyme, MiaB family [Burkholderia sp. CCGE1001]
Length = 461
Score = 38.0 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 23/133 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203
Query: 154 -----PLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L L + ++ + I ++ +R+ + P+ LI + K
Sbjct: 204 NAYRGALTLGSSEIADFATLIEYVADIPGIERIRYTTS----HPKEFTQRLIDTYAKVPK 259
Query: 206 PVYIAIHANHPYE 218
+ H + P +
Sbjct: 260 ---LVSHLHLPVQ 269
>gi|121535846|ref|ZP_01667645.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
gi|121305561|gb|EAX46504.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
Length = 457
Score = 38.0 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF +++ + E A+ ++ S E+ F GG+PL
Sbjct: 98 LHVAHDCNLRCRYCFAGTGDFGHDRGLMTKEVAEQAVEFLIASSGPRRHCEIDFFGGEPL 157
Query: 156 ILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
L+ + ++ + + R + +I + V ++ +I L E + +
Sbjct: 158 -LNMEVVRHTVDYVRRRAAETGKIFKLTLTTNAVL---LDDAIINYLNEHNISLVL 209
>gi|332669698|ref|YP_004452706.1| Radical SAM domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338736|gb|AEE45319.1| Radical SAM domain protein [Cellulomonas fimi ATCC 484]
Length = 398
Score = 38.0 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 72/214 (33%), Gaps = 34/214 (15%)
Query: 84 SPLKGIVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
P++ + H DR ++ ++ C + CR C + L + D + + +
Sbjct: 18 RPVRVLHHDVSDRPFLVIWEVTRACALACRHCRADAIPRRDPRE-LDTDDGKRLMDDLAS 76
Query: 141 KSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
++ TGGDP L +++ I + R+ +++
Sbjct: 77 FGAPRPLLVLTGGDPFERPD--LTELVAYGTSIG------LSVALAPSVTPRLTRDVLLE 128
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIA-----------AISRLANAGIILLSQSVLLKGIN 248
L++AG +++ + + +A A+ + +AGI L + + G
Sbjct: 129 LRDAGAK-AVSVSLDGAQAETHDAFRGVPGVYDATLTAMEAVRSAGIRLQVNTTVTAG-- 185
Query: 249 DDPEILANL---MRTFVELRIKPYYLHHPDLAAG 279
+ L +R ++ + +
Sbjct: 186 ----TVHELPWVLRRVLDAGAALWSVFFLVPTGR 215
>gi|315928738|gb|EFV08014.1| uncharacterized protein family UPF0004 family protein
[Campylobacter jejuni subsp. jejuni 305]
Length = 255
Score = 38.0 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 47/125 (37%), Gaps = 10/125 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ +K+ C C +C + G + K + + E++ TG +
Sbjct: 137 HTKAFVKIQEGCDFACSYCIIPSVRGKS--RSVDEKALLKQVEILGANGY-SEIVLTGTN 193
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K L K+L+ + I ++ +R S ++P +I+ ++ L E ++
Sbjct: 194 IGSYGLKNGTSLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLERHLH 249
Query: 211 IHANH 215
I H
Sbjct: 250 IALQH 254
>gi|255994316|ref|ZP_05427451.1| arylsulfatase regulator [Eubacterium saphenum ATCC 49989]
gi|255993029|gb|EEU03118.1| arylsulfatase regulator [Eubacterium saphenum ATCC 49989]
Length = 520
Score = 38.0 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTGGDPL 155
L + H C + C +CF + + ++ +AA+ ++ + + EV F GG+PL
Sbjct: 168 LHVAHGCNMRCGYCFAGDGEYNGSKALMDDATAKAAIDFLIRESKNRRNLEVDFFGGEPL 227
Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
L+ ++ +K R I+ + RF + I+ E+I+ E V +
Sbjct: 228 -LNFDVIKNTVKYARSIEKSANKNFRFT---LTTNGILIDDEVIEFSNEQMSNVVM 279
>gi|147798887|emb|CAN74965.1| hypothetical protein VITISV_006811 [Vitis vinifera]
Length = 936
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 36/114 (31%), Gaps = 9/114 (7%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL +E+E + + + + H + D + M +
Sbjct: 119 RELKASSKEKEVNLPELVSDITRLLYHSFHDIEAYLPHDMIEKMREETRESRMPKKEVLN 178
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ L YI+ ++ + +G D RL + L+ + ++ +
Sbjct: 179 LTIDFAIRQILEYIEI-PELRRIGISGID-----DTRL---VSRLKNLPSIRNM 223
>gi|51892771|ref|YP_075462.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM
14863]
gi|81388877|sp|Q67NX5|RIMO_SYMTH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|51856460|dbj|BAD40618.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM
14863]
Length = 485
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 13/126 (10%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFT 150
LK+ C C FC R +++ A + ++E I + +
Sbjct: 163 TAYLKIAEGCDCACAFCSIPLMRGRHRSRPIESIVDEARRLAGMG-VRELVVISQDTTYY 221
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + L ++L+ L + ++ +R H P RI ELI+ + K + Y+
Sbjct: 222 GLD--LYRKPMLARLLRELAQVDGIRWIRIH----YSYPTRITDELIEVIVTEPKVLNYL 275
Query: 210 AIHANH 215
+ H
Sbjct: 276 DLPLQH 281
>gi|312127450|ref|YP_003992324.1| tRNA-i(6)a37 thiotransferase enzyme miab [Caldicellulosiruptor
hydrothermalis 108]
gi|311777469|gb|ADQ06955.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
hydrothermalis 108]
Length = 471
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 62/154 (40%), Gaps = 24/154 (15%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMV 118
PQ I+ ++ + ++ ++GI + + +++ C +C +C +
Sbjct: 145 FPQLLYTAIMEKKTVIDVSEDEDVVVEGIPTARKQGVSAFVNIIYGCNNFCSYCIVPYVR 204
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG----------GDPLILSHKRLQKVLKT 168
G ++ ++ + + + + EV G GD + K+L+
Sbjct: 205 GRERSRRP--EEIVYEIEQLAQN-GVKEVTLLGQNVNSYGKDLGDGITFP-----KLLEK 256
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ IK ++ +RF + P+ ++ ELI +++
Sbjct: 257 VNEIKGIERIRFVTS----HPKDLSDELIVAMRD 286
>gi|227498040|ref|ZP_03928213.1| molybdenum cofactor biosynthesis protein A [Actinomyces
urogenitalis DSM 15434]
gi|226832548|gb|EEH64931.1| molybdenum cofactor biosynthesis protein A [Actinomyces
urogenitalis DSM 15434]
Length = 374
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C E + ++L++++ E+ I + TGG+PL+
Sbjct: 36 VTDRCNLRCTYCMPAEGLEWLPTPSLLTTQEIARLARIGVERLGIERIRLTGGEPLMRKD 95
Query: 160 KRLQKVLKTLRYIKHVQILRFHSR 183
L++++ + ++ R ++
Sbjct: 96 --LEEIV---ASVSTLRSARTGTK 114
>gi|85372896|ref|YP_456958.1| radical SAM domain-containing protein [Erythrobacter litoralis
HTCC2594]
gi|84785979|gb|ABC62161.1| radical SAM domain protein [Erythrobacter litoralis HTCC2594]
Length = 328
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 59/183 (32%), Gaps = 9/183 (4%)
Query: 62 PQKEELNILPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
P E LPEE+ DP P + D + L +C + C C+ +
Sbjct: 16 PFAVEAARLPEEKFSDPDWTAKGEPRASVPLVQLDTLWLNTGTLCNLACASCYIESSPTN 75
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH------KRLQKVLKTLRYIKH 174
LS L E+ FTGG+P + L++ + L
Sbjct: 76 DALVYLSHAHAAPFLDE-AGAIGTPEIGFTGGEPFMNPDFVPMLADTLERGFEALILSNA 134
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
++ +R H + +R L + + P + E AI + L+ G
Sbjct: 135 MKPMRRHEAALLDMRERFGDRLTIRVSLDHHTKAVHEAERGPRSW-EVAIDGLQWLSRNG 193
Query: 235 IIL 237
L
Sbjct: 194 FSL 196
>gi|329954832|ref|ZP_08295849.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
clarus YIT 12056]
gi|328526936|gb|EGF53947.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
clarus YIT 12056]
Length = 432
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 78/241 (32%), Gaps = 42/241 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEV 147
LK+ C C +C + G ++ + Y+ + E+
Sbjct: 135 RHYAYLKISEGCDRKCSYCAIPIITGRHISR--PMEEILDEVKYLVARGVKEFQVIAQEL 192
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 193 TYYGVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPMDLFRVMRERPNVC 246
Query: 208 -YIAIHANHP---------YEFS-EEAIAAISRLANA--GIILLSQSVLLKG----INDD 250
Y+ I H + EE I + GI L + L+ G D
Sbjct: 247 KYMDIALQHISDNMLDKMRRHVTKEETYRLIEKFREEVPGIHLR--TTLMVGHPGETEAD 304
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHF---------RLTIEEGQKIVASLKEKI 301
E L +R R+ + + +H+ + ++E I + ++
Sbjct: 305 FEELKEFVRKVRFDRMGAFAYSEEERTYAAAHYEDVIPQEVKQARLDELMSIQQGISAEL 364
Query: 302 S 302
S
Sbjct: 365 S 365
>gi|307721435|ref|YP_003892575.1| Radical SAM domain-containing protein [Sulfurimonas autotrophica
DSM 16294]
gi|306979528|gb|ADN09563.1| Radical SAM domain protein [Sulfurimonas autotrophica DSM 16294]
Length = 347
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 34/129 (26%), Gaps = 8/129 (6%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + D L G + + +VC C+FC + +
Sbjct: 15 LYDMDFFELGEFADKKRQELHGKKTYFNINRHINPTNVCADVCKFCAYSATRKNPNQYTM 74
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI----KHVQILRFHS 182
+ +D +A + EV + L L + I H+ + +
Sbjct: 75 THEDIMKIVAEVDAHGA-KEVHIVSA---HNPNVTLDWYLGIFKKIKTAYPHLHVKALTA 130
Query: 183 RVPIVDPQR 191
+
Sbjct: 131 AEVDFLSRH 139
>gi|167769534|ref|ZP_02441587.1| hypothetical protein ANACOL_00868 [Anaerotruncus colihominis DSM
17241]
gi|167668502|gb|EDS12632.1| hypothetical protein ANACOL_00868 [Anaerotruncus colihominis DSM
17241]
Length = 470
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 91 HRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
Y +RI++ + C CR+C LS +D + +Q+
Sbjct: 78 RNYGNRIVMFAPLYLSNYCVNECRYCPYHHHNTHIARRQLSQEDIVREVVALQDMGHKRL 137
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR 191
+ TG DP+ + + + +KT+ IKH ++ + + V+ R
Sbjct: 138 ALETGEDPVNCPIEYVLESIKTIYGIKHKNGAIRRVNVNIAATTVENYR 186
>gi|157377532|ref|YP_001476132.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis
HAW-EB3]
gi|157319906|gb|ABV39004.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis
HAW-EB3]
Length = 326
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 15/160 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C + L+ + E +A E ++ TGG+P +
Sbjct: 17 MSVTDVCNFKCTYCLPDGYRPDGRSKFLALSEIENLVAAFSE-VGTQKIRITGGEPTLRK 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEA-----GKPVYIAI 211
+++ + ++ + + ++ ++ + + K Y
Sbjct: 76 D--FTDIIRAVADNDKIKTIATTTNGYRLEKHAKEWYDAGLRRINVSVDSLDPKMFYQIT 133
Query: 212 HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
N E + I AG + +VLLKG ND
Sbjct: 134 GENKFDE----VMRGIDAALEAGFERVKINAVLLKGFNDK 169
>gi|167039016|ref|YP_001662001.1| radical SAM domain-containing protein [Thermoanaerobacter sp. X514]
gi|300913395|ref|ZP_07130712.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
gi|307723590|ref|YP_003903341.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513]
gi|166853256|gb|ABY91665.1| Radical SAM domain protein [Thermoanaerobacter sp. X514]
gi|300890080|gb|EFK85225.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
gi|307580651|gb|ADN54050.1| Radical SAM domain protein [Thermoanaerobacter sp. X513]
Length = 427
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+GI P + C + C CF K + ++ + L I+E I
Sbjct: 83 HCEGIQKIGPTIAYFHITQRCNLNCPTCFT-FSPKRNKLNDMPTEKVKEVLRKIKE-FGI 140
Query: 145 WEVIFTGGDPLILSH--KRLQK 164
EVIF+GG+P + K L++
Sbjct: 141 NEVIFSGGEPFLREDFIKILEE 162
>gi|289549019|ref|YP_003474007.1| RNA modification enzyme, MiaB family [Thermocrinis albus DSM 14484]
gi|289182636|gb|ADC89880.1| RNA modification enzyme, MiaB family [Thermocrinis albus DSM 14484]
Length = 437
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 14/132 (10%)
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGT 124
P E ED + + V + ++ C +C +C R +
Sbjct: 126 EEPPEDEDRMWEFKT------VRDNAYCAYVTVMKGCDKHCTYCVVPKTRGRQRSRSLES 179
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+L A + V G D + ++L + I V+ +RF +
Sbjct: 180 ILEEVRWLVADGVKEIHLLGQNVTAWGQDI----NIHFSELLYRVAEIPGVERIRFTTGH 235
Query: 185 PIVDPQRINPEL 196
P +RI +
Sbjct: 236 PSDMDERIAKAM 247
>gi|302541327|ref|ZP_07293669.1| radical SAM domain protein [Streptomyces hygroscopicus ATCC 53653]
gi|302458945|gb|EFL22038.1| radical SAM domain protein [Streptomyces himastatinicus ATCC 53653]
Length = 215
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 19/165 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTG-GDPLILS 158
L C C +C + S++ E A+ +E+S V+FT G+ L S
Sbjct: 10 PLASCDYDCPYCPFAKRRDSREALRADRAALERFTAWAREQSGDRLSVLFTPWGEGLTRS 69
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
R + L L + H++ + + + E + + HP +
Sbjct: 70 WYR--RALTELSRLPHIERVAIQTNLSC--RTDWTAE------ADRDTLALWCTY-HPGQ 118
Query: 219 FSEEAI--AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A LA G+ SV + G+ D + L
Sbjct: 119 -TPRDRFLAKCRELAARGVR---HSVGIVGLPDHLDQARELRAEL 159
>gi|163857994|ref|YP_001632292.1| molybdenum cofactor biosynthesis protein A [Bordetella petrii DSM
12804]
gi|163261722|emb|CAP44024.1| molybdenum cofactor biosynthesis protein A [Bordetella petrii]
Length = 370
Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 82/285 (28%), Gaps = 63/285 (22%)
Query: 101 LLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE+ + +LS ++ + + ++ TGG+PL
Sbjct: 45 VTDRCNFRCTYCMPREVFDGNYAFMPQSALLSFEEITRLARLFAQ-LGVEKIRLTGGEPL 103
Query: 156 ILSH-KRLQKVLKTLR---------------YIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ + + L +L LR + H R + + R+ L
Sbjct: 104 LRKNIESLIAMLAELRTPAGQPLELTLTTNGTLLH----RKAAALKAAGLTRVTVSL-DA 158
Query: 200 LKEAGKPVYIAIHANHPYEFSE-EAIAAISRLANAG-IILLSQSVLLKGINDDPEILANL 257
L A + + + I A+AG + V+ +G+ND
Sbjct: 159 LDAAMFARLSDSTF------TPDDVLRGIDAAADAGLAPVKINMVVRRGLND-------- 204
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK----ISGLCQPFYILDL 313
+ R + H + + G + + + + G P LD
Sbjct: 205 CQILPMARRFRHSGHVLR---FIEYMDVGTTNGWNLQEVVPSREVLDLIGAAHPLRALDT 261
Query: 314 ------------PGGYGKVKIDTHNIKKVGNGSYCIT-DHHNIVH 345
G G++ + + G + +
Sbjct: 262 EIMGRVAERWAYADGGGEIGVISSVTHAFCGGCTRVRLSPEGKIF 306
>gi|330959524|gb|EGH59784.1| putative transcriptional regulator [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 380
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVIF 149
++ LK + C V C FC+ E V S K ++ + E +L I+ ++ +++
Sbjct: 3 QVYLKPTNYCNVGCDFCYLPEEVRSDK-NRMTPQTLEHSLQLIRDLAAREGHDRV-SILY 60
Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
GG+PL L+ + L + +R
Sbjct: 61 HGGEPLTLAPEVLFEFSDAVRQ 82
>gi|291166144|gb|EFE28190.1| radical SAM domain protein [Filifactor alocis ATCC 35896]
Length = 462
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF ++ K ++S + + AL ++ E S EV F GG+PL
Sbjct: 101 LHVAHTCNLACDYCFAKQGKYHGKDGLMSFEVGKKALDFLIEHSGTRTNLEVDFFGGEPL 160
Query: 156 I 156
+
Sbjct: 161 M 161
>gi|226939284|ref|YP_002794355.1| coproporphyrinogen III oxidase [Laribacter hongkongensis HLHK9]
gi|226714208|gb|ACO73346.1| HemN [Laribacter hongkongensis HLHK9]
Length = 470
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 58/144 (40%), Gaps = 11/144 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVI 148
L + C C +C +++ K + ++ Y+Q Q+ ++
Sbjct: 63 RGVSLYAHIPFCNTVCYYCACNKIITKDKSRADTYLDYLERELALHAEYLQGHPQLAQLH 122
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
F GG P LS ++ ++++ + H Q++ +DP+++ + ++ L G
Sbjct: 123 FGGGTPTFLSDAQMTRLMQAIGR--HFQLVPHGEYSIEIDPRKVTADNVKHLASLGFNRM 180
Query: 209 IAIHANHPYEFSEEAIAAISRLAN 232
+F + AA++R+ +
Sbjct: 181 SVG----VQDFDPQVQAAVNRIQS 200
>gi|223996297|ref|XP_002287822.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976938|gb|EED95265.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 435
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGT 124
EL+ E + I DN + G H Y L C + C++C E V S
Sbjct: 35 ELDTPKVEYSNNI-DNILTDTHGRHHNYLRISL---SERCNLRCQYCMPPEGVPLSPASH 90
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+L++++ + + + +V TGG+PL+ +
Sbjct: 91 LLTNEEVVRLVDLFVKN-GVNKVRLTGGEPLLRPN 124
>gi|303245812|ref|ZP_07332095.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
gi|302493075|gb|EFL52940.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
Length = 373
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 76/242 (31%), Gaps = 35/242 (14%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
+ P + P R I ++ C + C+ C R E
Sbjct: 1 MQHPHANGHGHPHNAHPAGPAGMPPLR---LIAWEVTRACNLACKHC-RAEACLDPWPGE 56
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + +A + E +IFTGG+PL+ + +++ R
Sbjct: 57 FDTAEAKALIDTFPETGSPI-IIFTGGEPLLRPD--IFDLVRHARSRD--LRCVMAPNGT 111
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE-----------AIAAISRLANAG 234
+ + E + ++++G +I + P + A+ I L +AG
Sbjct: 112 L-----VTAENAREIRDSGIA-RCSISIDAPNAADHDAFRGVPGAFEGALRGIEYLKSAG 165
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+ + + K + + + L + +++ +E G +I+
Sbjct: 166 VEFQINTTVTKHNMGNFKEIFKLAESL---GAAAWHIFLLVPTGRA------VELGAEII 216
Query: 295 AS 296
+
Sbjct: 217 TA 218
>gi|251780641|ref|ZP_04823561.1| heme biosynthesis [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243084956|gb|EES50846.1| heme biosynthesis [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 451
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 66 ELNILPE-EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL +D + HS + Y + L ++H C + C++CF E
Sbjct: 67 ELIDNGILYSKDQYEEIAHSSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYHGHKG 124
Query: 125 VLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171
V+S + A+ Y+ ++S E+ GG+P + ++ ++K R
Sbjct: 125 VMSLDVAKKAIDYVVKRSGPRKNIEIDLFGGEP-TMIMDTIKDIIKYARD 173
>gi|188590051|ref|YP_001922114.1| heme biosynthesis [Clostridium botulinum E3 str. Alaska E43]
gi|188500332|gb|ACD53468.1| heme biosynthesis [Clostridium botulinum E3 str. Alaska E43]
Length = 451
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 66 ELNILPE-EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL +D + HS + Y + L ++H C + C++CF E
Sbjct: 67 ELIDNGILYSKDQYEEIAHSSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYHGHKG 124
Query: 125 VLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171
V+S + A+ Y+ ++S E+ GG+P + ++ ++K R
Sbjct: 125 VMSLDVAKKAIDYVVKRSGPRKNIEIDLFGGEP-TMIMDTIKDIIKYARD 173
>gi|150401898|ref|YP_001325664.1| molybdenum cofactor biosynthesis protein A [Methanococcus aeolicus
Nankai-3]
gi|189028686|sp|A6UX30|MOAA_META3 RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|150014601|gb|ABR57052.1| putative molybdenum cofactor biosynthesis protein A [Methanococcus
aeolicus Nankai-3]
Length = 299
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + C +C + +++ + + Y K I ++ +GG+PL+ +
Sbjct: 16 ITPQCNLNCFYCHKEGHNIDNN-KLMTPTEIGEMVKY-SLKYGINKIKISGGEPLLRND- 72
Query: 161 RLQKVLKTLRYIKH--VQILRFHSRVPIVDPQ 190
L ++++ ++ +K+ ++ + + +++
Sbjct: 73 -LPEIIRNIKNLKNNQIKDISLTTNGILLEKY 103
>gi|307721838|ref|YP_003892978.1| GTP cyclohydrolase subunit MoaA [Sulfurimonas autotrophica DSM
16294]
gi|306979931|gb|ADN09966.1| GTP cyclohydrolase subunit MoaA [Sulfurimonas autotrophica DSM
16294]
Length = 321
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 37/101 (36%), Gaps = 7/101 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQI 144
++ Y + + C C++C + K +LS ++ + + +
Sbjct: 2 LIDSYDRVVDYLRVSVTERCNFRCQYCMPEKPFSWVPKENLLSFEELFEFMK-VAIDEGV 60
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++ TGG+PL+ L K +K + + L +
Sbjct: 61 KKIRITGGEPLLRED--LDKFIKMIYDYEPSIDLAMTTNAF 99
>gi|229543504|ref|ZP_04432564.1| molybdenum cofactor biosynthesis protein A [Bacillus coagulans
36D1]
gi|229327924|gb|EEN93599.1| molybdenum cofactor biosynthesis protein A [Bacillus coagulans
36D1]
Length = 333
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 33/89 (37%), Gaps = 7/89 (7%)
Query: 101 LLHVCPVYCRFCFR----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ C C +C ++ + +++ ++ + ++ TGG+PL+
Sbjct: 17 VTDRCNFRCTYCMPADNGQKYCFMNRSELMTFEEITRLARLFVS-LGVRKIRLTGGEPLL 75
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ +++ L I ++ L +
Sbjct: 76 RKD--IDQLVAMLHQIDGLEDLSVTTNGF 102
>gi|308274253|emb|CBX30852.1| hypothetical protein N47_E43640 [uncultured Desulfobacterium sp.]
Length = 342
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 70/187 (37%), Gaps = 27/187 (14%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+P ++++ L C + CR C + LS E L+ +E V
Sbjct: 24 QRFPLVLMIEPLFRCNLRCRGCGKIAYPEETLNRQLS---VEECLSASKECPAPV-VSIA 79
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+PL+ + + ++++ L + H + + + + RI+ + + +
Sbjct: 80 GGEPLLHTD--IPRIVQKL--VAHKKFVYLCTNALLA-ANRIDE------FQPSQYLAFN 128
Query: 211 IHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
+H + E + A+ I L G + + + L ++ PE A L
Sbjct: 129 VHLDGLEERHDAMVGREGVFQHAVTTIRLLIKRGFRVTTNTTL--YADETPESAARLFDF 186
Query: 261 FVELRIK 267
+ ++
Sbjct: 187 LTSIGVE 193
>gi|317056660|ref|YP_004105127.1| Radical SAM domain-containing protein [Ruminococcus albus 7]
gi|315448929|gb|ADU22493.1| Radical SAM domain protein [Ruminococcus albus 7]
Length = 457
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 52/135 (38%), Gaps = 11/135 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTGGDPL 155
L + H C + C++CF ++ + + A+ ++ + EV F GG+P
Sbjct: 99 LHISHDCNLRCKYCFASTGDFGVGRKLMDFETAKRAIDFLIEKSADRKFLEVDFFGGEP- 157
Query: 156 ILSHKRLQKVLK--TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
++ + K ++ R + + RF + + + E+I + + V +
Sbjct: 158 SMNFGVVMKTVEYARSREKETGKTFRFTT---TTNGMHLTDEMIDFINKEMYNVVL--SI 212
Query: 214 NHPYEFSEEAIAAIS 228
+ E ++ +
Sbjct: 213 DGRKEVNDRVRVRVD 227
>gi|254518526|ref|ZP_05130582.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
gi|226912275|gb|EEH97476.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
Length = 451
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EV 147
Y + L ++H C + C++CF E + V+S + + A+ Y+ ++S E+
Sbjct: 91 RDYIKAVCLNIIHGCNLRCKYCFADEGEYNGHKGVMSLETAKKAIDYVVKRSGPRRNIEI 150
Query: 148 IFTGGDPLILSHKRLQKVLKTLRY 171
GG+P + +++++K R
Sbjct: 151 DLFGGEP-TMIMDTVKEIIKYARE 173
>gi|51245133|ref|YP_065017.1| coenzyme PQQ synthesis protein [Desulfotalea psychrophila LSv54]
gi|50876170|emb|CAG36010.1| related to coenzyme PQQ synthesis protein [Desulfotalea
psychrophila LSv54]
Length = 352
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 69/217 (31%), Gaps = 37/217 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + C + C C + S ++ + + I ++ ++ +GG+
Sbjct: 5 PKWIAWETTRRCNLKCVHCRSSSELDVVAHPDFSLQEAKQIIDKITSYAKPV-LVLSGGE 63
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL L++ + + Q LR + + E+ +K+ +
Sbjct: 64 PL------LREDIFDIAQYGTDQGLRMC---LATNGTLVTDEVCLKIKKTNIRMVSLSLD 114
Query: 209 ---IAIH---ANHPYEFSEEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRTF 261
A H N F+ + AI I L S ++ ++ P+I +
Sbjct: 115 GATAATHDDFRNQKGAFT-GTMHAIELFQKYDIPFLVNSSFTVRNRHEIPDIYRLVKEK- 172
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Y+ + G++I+ L
Sbjct: 173 ---GATAWYMFMI----------VPTGRGEEIMEELI 196
>gi|152996920|ref|YP_001341755.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinomonas sp. MWYL1]
gi|229890562|sp|A6VZE1|MIAB_MARMS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|150837844|gb|ABR71820.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinomonas sp. MWYL1]
Length = 451
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 15/128 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIWEVIFT 150
+ ++ C YC FC G + S + E + I V
Sbjct: 148 AFVSIMEGCSKYCTFCVVPYTRGEEVSRPFDSILKEVVQLAEQGVREI--HLLGQNVNAY 205
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD L ++ + I V+ +RF + P+ + LI+ + K +
Sbjct: 206 RGDTAEGDEADLADIIHAVAQIDGVERIRFTTSHPV----EFSDSLIEAFRNEPK---LV 258
Query: 211 IHANHPYE 218
H + P +
Sbjct: 259 SHLHLPVQ 266
>gi|158425038|ref|YP_001526330.1| nitrogenase cofactor biosynthesis protein [Azorhizobium caulinodans
ORS 571]
gi|158331927|dbj|BAF89412.1| nitrogenase cofactor biosynthesis protein [Azorhizobium caulinodans
ORS 571]
Length = 519
Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 60/189 (31%), Gaps = 24/189 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H + R+ + + C + C +C R+ G + + + LA Q+
Sbjct: 69 HHHYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLSPEQAAKKVLAVASTIPQM 128
Query: 145 WEVIFTG-GDPL---------------ILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIV 187
+ G GDPL +L L HV + ++ +
Sbjct: 129 TVLGIAGPGDPLANPEKTFKTFELISKTAPDIKLCLSTNGLTLPDHVDTIASYNVDHVTI 188
Query: 188 DPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
++PE+ + + ++ + + L GI+ SV++ G
Sbjct: 189 TINMVDPEIGAKIYPWVFYKHKRYTGIDAAKILTDRQLLGLEMLTARGILTKINSVMIPG 248
Query: 247 INDDPEILA 255
IND +
Sbjct: 249 INDQHLVEV 257
>gi|310780054|ref|YP_003968386.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
gi|309749377|gb|ADO84038.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
Length = 222
Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ + L C + C +C M +Q V S E YI+ + V TGG+P
Sbjct: 21 ELAVFIRLAGCNLRCSYC--DTMWANQDDVVFKSMSKEEIYDYIKST-GVTNVTLTGGEP 77
Query: 155 LI 156
LI
Sbjct: 78 LI 79
>gi|148642712|ref|YP_001273225.1| pyruvate formate-lyase activating enzyme, PflA [Methanobrevibacter
smithii ATCC 35061]
gi|148551729|gb|ABQ86857.1| pyruvate formate-lyase activating enzyme, PflA [Methanobrevibacter
smithii ATCC 35061]
Length = 234
Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGG 152
+ L+ + CP+ CR+C E++ K+ A +I V+ +GG
Sbjct: 16 NMSLVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEINDAADFIDA------VVISGG 69
Query: 153 DPLILSHKRLQ 163
+PL+ S ++
Sbjct: 70 EPLVQSDAVIE 80
>gi|313902877|ref|ZP_07836273.1| Radical SAM domain protein [Thermaerobacter subterraneus DSM 13965]
gi|313466812|gb|EFR62330.1| Radical SAM domain protein [Thermaerobacter subterraneus DSM 13965]
Length = 479
Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 76/221 (34%), Gaps = 31/221 (14%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C C FCF ++ Q+ LS ++ A + + + + G +P +
Sbjct: 128 LFINGRCNQRCSFCFLDFGLMAQQEKRKLSCEEWLAITDELI-HAGVNVINIGGMEPFL- 185
Query: 158 SHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-- 214
++ + L ++ I+ + I L + V + H
Sbjct: 186 ---DIELTISILEKAYENGCIVGVITNGSISLSSEQMERLAAM--QCYVGVSLEAHVPTV 240
Query: 215 HPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H + + +A I ++ G+ + Q+V L+ + L + EL +K
Sbjct: 241 HNDLVNARGAFQQCVANIEKMIQHGVPVGIQTVALR---SNMAYLEQFVEWLEELGVKSL 297
Query: 270 ------------YLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
++ DLA + +R +E + + + K
Sbjct: 298 SIQNIFAGPWCSHVRFFDLAMTPAEYRTIVERAKLLERTAK 338
>gi|298291057|ref|YP_003692996.1| coenzyme PQQ biosynthesis protein E [Starkeya novella DSM 506]
gi|296927568|gb|ADH88377.1| coenzyme PQQ biosynthesis protein E [Starkeya novella DSM 506]
Length = 380
Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 77/247 (31%), Gaps = 37/247 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P +L +L H CP+ C +C + ++ L + + K + +V +GG+
Sbjct: 20 PYGMLAELTHRCPLQCPYCS-NPVELDRRNVELDLDTWKRVFSE-AAKLGVLQVHLSGGE 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P L+ +++ H + ++ + + PE +Q + +AG
Sbjct: 78 PTARRD--LEDMVR------HCVEVGIYTNLITAGVG-VTPERLQAISDAGIDHVQLSFQ 128
Query: 214 NHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
E +++ + G+ L SV+ + L
Sbjct: 129 GATAEVTDKVSNFRGAHERKLAVAREVRRLGLPLTINSVVHRANIHQIPAFIELALELDA 188
Query: 264 LRIK-PYYLHHPDLAAGTSHFRLTIEE---GQKIVASLKEKISGLCQPFYILDLPGGYGK 319
RI+ + ++ T E+ +V + ++ G +D
Sbjct: 189 KRIEIAHSQYYGWALRNRGALMPTREQVFWALDVVEEARARLKG----RLTIDA------ 238
Query: 320 VKIDTHN 326
+
Sbjct: 239 --VVPDY 243
>gi|296284245|ref|ZP_06862243.1| molybdenum cofactor biosynthesis protein [Citromicrobium
bathyomarinum JL354]
Length = 346
Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 60/173 (34%), Gaps = 17/173 (9%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+V Y RI + C + C +C M K VLS ++ +
Sbjct: 20 LVDTYQRRITYLRLSVTDRCDLRCTYCMPERMQFLPKAEVLSLEELYVLACSFMA-RGVR 78
Query: 146 EVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC- 199
+ TGG+PL+ + + + + + V + +++ + +
Sbjct: 79 TIRLTGGEPLVRRDVIDLVRAIGRHVG--SELDEVTLTTNGTQLAGHANALARAGMRRIN 136
Query: 200 --LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
L + + + + + I+ +AG+ + +V ++G+ND
Sbjct: 137 VSLDTRDPQTFRMLSR---RDALPQVLEGIAAAKDAGLQVKLNTVAMRGVNDR 186
>gi|238926969|ref|ZP_04658729.1| 2-methylthioadenine synthetase [Selenomonas flueggei ATCC 43531]
gi|238885203|gb|EEQ48841.1| 2-methylthioadenine synthetase [Selenomonas flueggei ATCC 43531]
Length = 442
Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 89/300 (29%), Gaps = 58/300 (19%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+K+ C C FC + G + +D A + E + E++ D
Sbjct: 145 TAYVKIAEGCDHRCAFCAIPLIRGGFRSR--PMEDIVAEGQELAEN-GVRELVLIAQDSA 201
Query: 156 ILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
R L +L+ L I + +R P+ ELI+ K V Y+
Sbjct: 202 NYGLDRYHEPMLPMLLRALAKIDGIAWIRV----LYSYPKYFTDELIEVFATEPKVVKYV 257
Query: 210 AIHANHPYEF------SEEAIAAISRL---ANAGII-LLSQSVLLKGINDDPEILANLMR 259
+ H ++ + A I +L I + +S + G + + +R
Sbjct: 258 DLPLQHAHDAVLRSMNRPDTRADIEKLIGKLRTRIPGVAIRSTFIVGFPGETDAQYQTLR 317
Query: 260 TFV------ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK--------------- 298
FV ++ I Y D A +++ E Q+ L
Sbjct: 318 RFVEKQRFDKVGI-FTYSEEEDTPAAAMGKKVSEEVMQERYHDLMSLQSKISEEINIGLE 376
Query: 299 ------------EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ SG+ + P G++ I+ + + +D
Sbjct: 377 RQELDVLIEGHDAEQSGIAVGRSYREAPEVDGQIYIEGD-AESAPGEIVRVRLLQGFTYD 435
>gi|15669097|ref|NP_247902.1| chondro-6-sulfatase regulatory protein [Methanocaldococcus
jannaschii DSM 2661]
gi|3334424|sp|Q58317|Y907_METJA RecName: Full=Uncharacterized protein MJ0907
gi|1591581|gb|AAB98909.1| chondro-6-sulfatase regulatory protein isolog [Methanocaldococcus
jannaschii DSM 2661]
Length = 286
Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G+ H ++LK+ + C + C +C+ + A+ Y+ ++
Sbjct: 4 GMKH-----LILKVTNRCNLNCIYCYANNKNNKDMDFKTAK----NAIDYLLNLDNQIKI 54
Query: 148 IFTGGDPLILSHKRLQKVLK 167
FTGG+PL L+ ++K++
Sbjct: 55 QFTGGEPL-LNFNLIEKIVD 73
>gi|296119510|ref|ZP_06838068.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
ammoniagenes DSM 20306]
gi|295967393|gb|EFG80660.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
ammoniagenes DSM 20306]
Length = 397
Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 72/214 (33%), Gaps = 19/214 (8%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + L + + + I ++ FTGG+PL+
Sbjct: 70 LTDRCNLRCTYCMPAEGLEWMPTEHTLDDDEVVRLITLAVTQLGIRQIRFTGGEPLLR-- 127
Query: 160 KRLQKVLKTLRYIKHVQ----ILRFHSRVPIV------DPQRINPELIQCLKEAGKPVYI 209
K L+ ++ + ++ + + + + + + L K Y
Sbjct: 128 KSLEYIIAETKKLRTDEGRAPSIALTTNGLGLEHRAKRLHEAGLDRVNISLDTIDKQRY- 186
Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ AI G+ + +V++ G+N+D + L + + +
Sbjct: 187 -AQLTRRDRLG-GVMKAIDAAIEVGLNPVKINAVVMPGVNED--DIVPLAKFALRKGAQL 242
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
++ L R + I++ L ++S
Sbjct: 243 RFIEQMPLGPREKWKRSDMVTADDILSRLDAQLS 276
>gi|126652323|ref|ZP_01724499.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. B14905]
gi|126590898|gb|EAZ85011.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. B14905]
Length = 308
Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 63/191 (32%), Gaps = 19/191 (9%)
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+L+ + E + I + +V TGG+PL+ L +++ + ++ V+ +
Sbjct: 14 PSDKILNFDEIERLVK-IFVSLGVKKVRITGGEPLLRRD--LTELIARIHRLEGVEDIAL 70
Query: 181 HSRVPIV------DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
+ ++ Q + L + N + I + A AG
Sbjct: 71 TTNGTLLKKYAQPLAQAGLSRVSISLDSLNDERFF--EMNGHRGKVSTVLEGIEKAAEAG 128
Query: 235 IILLSQSVLLKGINDDPEILANLM--RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG-Q 291
+ + V+ KG ND + LR Y ++ +R+ +
Sbjct: 129 LQVKINMVVQKGKNDQDVLEMARFFKEKQHILRFIEY-----MDVGNSNGWRMDDVLAKK 183
Query: 292 KIVASLKEKIS 302
I+ + +
Sbjct: 184 DIIEQIHQHSP 194
>gi|153951587|ref|YP_001397915.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. doylei
269.97]
gi|152939033|gb|ABS43774.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. doylei
269.97]
Length = 416
Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ +K+ C C +C + G + K + + E++ TG +
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKS--RSVDEKALLKQVEILGANGY-SEIVLTGTN 188
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K L K+L+ + I ++ +R S ++P +++ ++ L E ++
Sbjct: 189 IGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQLDESFLEILDETWLERHLH 244
Query: 211 IHANHPYE 218
I H E
Sbjct: 245 IALQHTSE 252
>gi|228985631|ref|ZP_04145784.1| antilisterial bacteriocin (subtilosin) production [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228774026|gb|EEM22439.1| antilisterial bacteriocin (subtilosin) production [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 86
Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP +++ + C V CR C+ G+ K V+S ++ L + + + TGG
Sbjct: 23 YPKVASIEITNRCNVRCRHCY--GDFGAVKPKVMSLDQIKSLLDDL-NHIGVKLIELTGG 79
Query: 153 D 153
D
Sbjct: 80 D 80
>gi|269215587|ref|ZP_06159441.1| MiaB tRNA modifying enzyme-like protein [Slackia exigua ATCC
700122]
gi|269131074|gb|EEZ62149.1| MiaB tRNA modifying enzyme-like protein [Slackia exigua ATCC
700122]
Length = 446
Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 50/167 (29%), Gaps = 16/167 (9%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRREM 117
F+P E +I G H + + C +C FC +
Sbjct: 116 FVPCAGESDIADVLESLFGPQPEPDAALG-AHLFDGNAAAYVKIGDGCDHFCSFCSIPYI 174
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL-----ILSHKRLQKVLKTLRYI 172
G + + A+A Q + E+ D + + L ++ L
Sbjct: 175 RGRY--RSFTYERIREAVAR-QISYGVREITLIAQDTGRWGCDLEGDRTLAWLIDALAS- 230
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYE 218
+ RV ++P+ + EL+ + Y+ I H E
Sbjct: 231 ---EFADTWFRVMYLEPEGVTDELLDVMASRPNVCRYLDIPVQHASE 274
>gi|296157337|ref|ZP_06840173.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. Ch1-1]
gi|295892673|gb|EFG72455.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. Ch1-1]
Length = 457
Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 23/134 (17%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 148 TAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQN 202
Query: 154 ------PLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L L + ++ + I ++ +R+ + P+ LI +
Sbjct: 203 VNAYRGGLTLGSSEIADFATLIEYVADIPGIERIRYTTS----HPKEFTQRLIDTYAKVP 258
Query: 205 KPVYIAIHANHPYE 218
K + H + P +
Sbjct: 259 K---LVSHLHLPVQ 269
>gi|282882002|ref|ZP_06290643.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus lacrimalis
315-B]
gi|281298032|gb|EFA90487.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus lacrimalis
315-B]
Length = 467
Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 18/126 (14%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW 145
G Y + + +++ C +C FC + S++ + + I+
Sbjct: 168 GANRLYSYKSYVNIMYGCNNFCTFC-----IVPYTRGREKSREADEIVDEIKSLIDKGSK 222
Query: 146 EVIFTG------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
E+ G G L ++L + IK V+ +RF P+ I+ ELI
Sbjct: 223 EITLLGQNVNSYGRGLENKTS-FAQLLYRINDIKGVERIRF----MTSHPKDISDELIYA 277
Query: 200 LKEAGK 205
++
Sbjct: 278 FRDLDH 283
>gi|167945021|ref|ZP_02532095.1| Radical SAM domain protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 275
Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
I + L C + C C+ L++ + +A L I+E+ V+ TGG+PL
Sbjct: 7 IAINLTRRCNLACAHCYMDAATREAGSEAELTTDEVKALLDQIRERGDDTMVVLTGGEPL 66
Query: 156 ILSH 159
+
Sbjct: 67 LRRD 70
>gi|240171865|ref|ZP_04750524.1| molybdenum cofactor biosynthesis protein A [Mycobacterium kansasii
ATCC 12478]
Length = 137
Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L H C + C +C + + + L+ + + + + I EV FTGG+PL+
Sbjct: 1 MSLTHRCNLRCSYCMPADGLDRMADSDRLTDGEVVRLVGIVVARLGIREVRFTGGEPLLR 60
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L+ + + ++ + +
Sbjct: 61 --RGLESTVAQVARLRPRPRISLTTNGI 86
>gi|159905287|ref|YP_001548949.1| radical SAM domain-containing protein [Methanococcus maripaludis
C6]
gi|159886780|gb|ABX01717.1| Radical SAM domain protein [Methanococcus maripaludis C6]
Length = 369
Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 14/136 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW----EVIFTGGDP 154
+++ CP CRFC ++ G + + E+ + ++ I G
Sbjct: 138 IEITRGCPYNCRFCQTPQIFGKN----IRHRSIESIVKIVKTMGDIRFVTPNAFSYGSKT 193
Query: 155 LILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
++L+K++K+L IK + L F + V P+ + E + + + YI
Sbjct: 194 GTKPDIEKLEKLMKSLFEIK--KRLFFGTFPSEVRPEFVTFETLDLVNKYCDNRYIHFG- 250
Query: 214 NHPYEFSEEAIAAISR 229
S+E + I R
Sbjct: 251 --AQSGSDEVLKHIRR 264
>gi|309777995|ref|ZP_07672937.1| putative ThiH protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308914284|gb|EFP60082.1| putative ThiH protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 472
Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 52/138 (37%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L E + + K I + Y +RI++ + C C +C
Sbjct: 49 THREAAVLLECDLPKENEKMFALAKQIKQKLYGNRIVMFAPLYLSNYCVNGCVYCPYHYK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ LS ++ + +Q+ + TG DP+ + + + ++T+ IKH
Sbjct: 109 NKHIRRKKLSQEEIRQEVIALQDMGHKRLALETGEDPVHSPIEYVLESIRTIYDIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 169 AIRRVNVNIAATSVENYR 186
>gi|171185411|ref|YP_001794330.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
V24Sta]
gi|170934623|gb|ACB39884.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
Length = 216
Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L CP+ CR+C + G L D E + + V+ TGG+PLI
Sbjct: 23 AVFIRLAGCPIRCRYCDTKYSWDPLGGEEL---DAEEVVRRAAAHGPLGHVVITGGEPLI 79
Query: 157 LSHKRLQKVLKTLRYIKHVQI 177
+ L ++ LR + V++
Sbjct: 80 --WRNLHELACPLRRLGTVEV 98
>gi|162453798|ref|YP_001616165.1| hypothetical protein sce5522 [Sorangium cellulosum 'So ce 56']
gi|161164380|emb|CAN95685.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 476
Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 76/225 (33%), Gaps = 30/225 (13%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW----EVIFTGGD 153
+L+ CP C FC + + + I +V + D
Sbjct: 158 VLQATRGCPFTCSFCT-----VPDLNPGFRVRPVDEVIRDIATTHFPRFWQEKVAWFWDD 212
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L++ + +++L+ L + + R EL+ ++ +G + I +
Sbjct: 213 NLLVQRRWAKELLRELAGLD---RWWLTQASIDIVKDR---ELLDAMERSGC-IGIFLGI 265
Query: 214 NHPYEFSEEA-----------IAAISRLANAGIILLSQSVLLKGINDD-PEILANLMRTF 261
E ++ AI +L + GI ++ + + G +D PE++A+
Sbjct: 266 ESLDEADLKSVDKRQNRAREYREAIRKLHDRGICVM--AGFISGFDDQTPEVIASTADRL 323
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
E+ + +L GT + +G+ + SG
Sbjct: 324 NEIGVDVPFLSILTPFRGTPLYDEHRRDGRILEERDWPHYSGYGV 368
>gi|327400377|ref|YP_004341216.1| Radical SAM domain-containing protein [Archaeoglobus veneficus
SNP6]
gi|327315885|gb|AEA46501.1| Radical SAM domain protein [Archaeoglobus veneficus SNP6]
Length = 392
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--- 146
+ P I +L C + C+ C R QK + TE A I++ ++ +
Sbjct: 6 IREKPFIIFWELTRACMLACKHCRARA----QKERHPNELTTEEAFNVIEQITEFGKPYP 61
Query: 147 -VIFTGGDPLILSH 159
V+ TGGDPL+
Sbjct: 62 LVVITGGDPLMRDD 75
>gi|300814699|ref|ZP_07094949.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral
taxon 836 str. F0141]
gi|300511172|gb|EFK38422.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral
taxon 836 str. F0141]
Length = 467
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 16/125 (12%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW 145
G Y + + +++ C +C FC + S++ + + I+
Sbjct: 168 GANRLYSYKSYVNIMYGCNNFCTFC-----IVPYTRGREKSREADEIVDEIKSLIDKGSK 222
Query: 146 EVIFTGGDP-----LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E+ G + + + ++L + IK V+ +RF P+ I+ ELI
Sbjct: 223 EITLLGQNVNSYGRGLENKTTFAQLLYRINDIKGVERIRF----MTSHPKDISDELIYAF 278
Query: 201 KEAGK 205
++
Sbjct: 279 RDLDH 283
>gi|238018827|ref|ZP_04599253.1| hypothetical protein VEIDISOL_00686 [Veillonella dispar ATCC 17748]
gi|237864593|gb|EEP65883.1| hypothetical protein VEIDISOL_00686 [Veillonella dispar ATCC 17748]
Length = 337
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
L C C +C E+ + +LS + L + V TGG+PL+
Sbjct: 32 LTDACNFCCPYCRPAEITPQSQTQLLSVDEWMTILGAFHR-IGVKAVRLTGGEPLLYP-- 88
Query: 161 RLQKVLKTLRY 171
++++L ++
Sbjct: 89 HIEELLTRIKD 99
>gi|289582599|ref|YP_003481065.1| MiaB-like tRNA modifying enzyme [Natrialba magadii ATCC 43099]
gi|289532152|gb|ADD06503.1| MiaB-like tRNA modifying enzyme [Natrialba magadii ATCC 43099]
Length = 417
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 8/109 (7%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+L + C C +C ++ G + ++ E A A I + E+ TG D +
Sbjct: 126 ILPIARGCMSDCSYCITKKATGKIDSPSI-EENVEKARALI--HAGAKEIRITGQDTGVY 182
Query: 158 SHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+L ++L+ + I+ +R P I EL
Sbjct: 183 GWDEGERKLHRLLEEICAIEGDFRVRVGMANPKGVHG-IREELADVFAA 230
>gi|74311197|ref|YP_309616.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
sonnei Ss046]
gi|82543105|ref|YP_407052.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
boydii Sb227]
gi|123742024|sp|Q324N4|MIAB_SHIBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|123746029|sp|Q3Z4D1|MIAB_SHISS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|73854674|gb|AAZ87381.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81244516|gb|ABB65224.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|320174711|gb|EFW49843.1| tRNA-i(6)A37 methylthiotransferase [Shigella dysenteriae CDC
74-1112]
gi|323163924|gb|EFZ49733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella sonnei 53G]
gi|332097757|gb|EGJ02731.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii 3594-74]
Length = 474
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 34/217 (15%), Positives = 65/217 (29%), Gaps = 30/217 (13%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---- 151
+ ++ C YC +C G + S D +A + + EV G
Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAA-QGVREVNLLGQNVN 204
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ------RINPELIQCL-- 200
G+ S +L+ + I + +RF + PI R PEL+ L
Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264
Query: 201 ---KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ + + + + E+ A I +L A + S + G +
Sbjct: 265 PVQSGSDRILNLMGRTHTALEY----KAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320
Query: 258 MRTF---VELRIKPYYLHHPDLAAGTSHF--RLTIEE 289
V + ++ + + EE
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEE 357
>gi|300692273|ref|YP_003753268.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
PSI07]
gi|299079333|emb|CBM10239.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
PSI07]
Length = 341
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C +M + +LS +D + +I+ + ++ TGG+PL+
Sbjct: 24 VTDRCNLRCVYCMSEDMTFHARPDLLSMEDFDRIARAFIRR--GVRKLRITGGEPLVRKD 81
>gi|52080178|ref|YP_078969.1| ribosomal RNA large subunit methyltransferase N [Bacillus
licheniformis ATCC 14580]
gi|52785555|ref|YP_091384.1| YloN [Bacillus licheniformis ATCC 14580]
gi|319646042|ref|ZP_08000272.1| ribosomal RNA large subunit methyltransferase N [Bacillus sp.
BT1B_CT2]
gi|81385601|sp|Q65JS3|RLMN_BACLD RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|52003389|gb|AAU23331.1| Conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
gi|52348057|gb|AAU40691.1| YloN [Bacillus licheniformis ATCC 14580]
gi|317391792|gb|EFV72589.1| ribosomal RNA large subunit methyltransferase N [Bacillus sp.
BT1B_CT2]
Length = 361
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 76/234 (32%), Gaps = 33/234 (14%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+ H Y + + + C + C FC +R + + + + AL +
Sbjct: 108 MRHEYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVK--VQQALD--ETDE 163
Query: 143 QIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
++ ++ G G+P Q++L L+ + H + L +R V I P+ I
Sbjct: 164 RVSSIVIMGIGEPF----DNFQEMLAFLKIVNHDKGLNIGARHITVSTSGIIPK-IYEFA 218
Query: 202 EAGKPVYIAIH--------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
+ + AI N Y+ + A + G + + L G+
Sbjct: 219 DEKLQINFAISLHAPNTEIRSRLMPINRAYKLPDLMKAVDYYIKKTGRRVTFEYGLFGGV 278
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEGQKIVASLKEK 300
ND E L IK + P + R E+ +LK
Sbjct: 279 NDQVEHAEELAELLK--GIKCHVNLIPVNYVPERDYVRTPKEQIFAFEKTLKSH 330
>gi|218889252|ref|YP_002438116.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa LESB58]
gi|218769475|emb|CAW25235.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa LESB58]
Length = 387
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 34/232 (14%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ ++ +P + R P ++ LL C + C+ C+ S L + + +
Sbjct: 11 LAEDAPTPRRAGGRRAP-VVIWNLLRRCNLTCKHCY-STSADSDFRGELETAEILRGIDD 68
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINP 194
++ + + +I +GG+PL+ L ++ R + S ++D QR+
Sbjct: 69 LRA-AGVRVLILSGGEPLMHPD--LFEIAAHARQAG--MFVALSSNGTLIDEGNIQRVAE 123
Query: 195 ELIQC-------LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
L+E + A+AA+ I + ++ L +
Sbjct: 124 ARFDYVGISLDGLRETHDR------FRQKQGSFDAALAAMRLCREVDIRVGMRTTLTEEN 177
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAG--------TSHFRLTIEEGQ 291
L +LMR ++ +YL H + + H R
Sbjct: 178 AAQLPALLDLMREL---DVQKFYLSHLNYSGRGRRSRALDAHHRRTREALAL 226
>gi|296112984|ref|YP_003626922.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
RH4]
gi|295920678|gb|ADG61029.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
RH4]
gi|326569516|gb|EGE19576.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
BC8]
gi|326572719|gb|EGE22705.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
BC7]
Length = 361
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C G + L+ ++ LA +V TGG+P I
Sbjct: 55 ITDFCNFRCNYCLPNGYQGKRPNNELTQQEIATLLAGFAA-LSTTKVRLTGGEPSIRHD- 112
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
L +++ ++ + ++ S
Sbjct: 113 -LPDLIRLIKNTEGIKTACISSNG 135
>gi|326559662|gb|EGE10075.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
46P47B1]
gi|326574059|gb|EGE24008.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
CO72]
Length = 361
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C G + L+ ++ LA +V TGG+P I
Sbjct: 55 ITDFCNFRCNYCLPNGYQGKRPNNELTQQEIATLLAGFAA-LSTTKVRLTGGEPSIRHD- 112
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
L +++ ++ + ++ S
Sbjct: 113 -LPDLIRLIKNTEGIKTACISSNG 135
>gi|323705384|ref|ZP_08116959.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535286|gb|EGB25062.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 437
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 56/158 (35%), Gaps = 16/158 (10%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ + I+ LK+ C C FC ++ G + + +D
Sbjct: 127 ANELDDKDSPRILSTPKHYAYLKISEGCNNKCSFCIIPKLRGRYRSVKI--EDLLNEAKM 184
Query: 138 IQEKSQIWEVIFTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
+ E + E+I D I + L +L+ L I ++ +R P I
Sbjct: 185 LAEN-GVKELILIAQDTTKYGIDIYNKYMLPTLLRKLANINGIKWIRI----LYAYPDSI 239
Query: 193 NPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISR 229
ELI +K K + YI I H ++E + + R
Sbjct: 240 TDELIDEIKTNEKVLKYIDIPLQHS---NDEVLRRMKR 274
>gi|261417330|ref|YP_003251013.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373786|gb|ACX76531.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325710|gb|ADL24911.1| radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 224
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ LH C + C +C V +S + AA+ + +S + V TGG+PLI
Sbjct: 21 AVFVRLHGCNLRCSYCDSMYAVEGPDFKQMSVGEVLAAVEMYRNESGVKCVTLTGGEPLI 80
>gi|167038098|ref|YP_001665676.1| thiamine biosynthesis protein ThiH [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039189|ref|YP_001662174.1| thiamine biosynthesis protein ThiH [Thermoanaerobacter sp. X514]
gi|256750838|ref|ZP_05491722.1| biotin and thiamin synthesis associated [Thermoanaerobacter
ethanolicus CCSD1]
gi|300913216|ref|ZP_07130533.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
X561]
gi|307723770|ref|YP_003903521.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
X513]
gi|320116504|ref|YP_004186663.1| biotin and thiamin synthesis associated [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166853429|gb|ABY91838.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
X514]
gi|166856932|gb|ABY95340.1| biotin and thiamin synthesis associated [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256750173|gb|EEU63193.1| biotin and thiamin synthesis associated [Thermoanaerobacter
ethanolicus CCSD1]
gi|300889901|gb|EFK85046.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
X561]
gi|307580831|gb|ADN54230.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
X513]
gi|319929595|gb|ADV80280.1| biotin and thiamin synthesis associated [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 466
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 84/233 (36%), Gaps = 20/233 (8%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILL----KLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
E ED + + Y +RI++ + + C CR+C R Q+ L+
Sbjct: 54 EDEDLLNEMFKVARYIKEEIYGNRIVIFAPLYVSNYCVNNCRYCGYRHS-NEQERKKLTM 112
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK----HVQILRFHSRV 184
++ + ++E + G DP+ + V+KT+ K ++ + +
Sbjct: 113 EEVRREVEILEEMGHKRLAVEAGEDPVNCPIDYIIDVIKTIYDTKLKNGSIRRVNVNIAA 172
Query: 185 PIVDPQRINPEL---IQCL--KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
V+ + E+ L + +P Y +H P + + A+ R AGI +
Sbjct: 173 TTVENYKKLKEVGIGTYILFQETYHRPTYEYMHPQGPKHDYDYHLTAMDRAMEAGIDDVG 232
Query: 240 QSVLLKGINDDPEILANLMRT---FVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
VL + E +A L + + P+ + P L I++
Sbjct: 233 LGVLYGLYDYKYETVAMLYHANHLEEKFGVGPHTISVPRLRPA---LNTPIDK 282
>gi|187733108|ref|YP_001879330.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
boydii CDC 3083-94]
gi|229890659|sp|B2TU59|MIAB_SHIB3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|187430100|gb|ACD09374.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii CDC
3083-94]
Length = 474
Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 34/217 (15%), Positives = 65/217 (29%), Gaps = 30/217 (13%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---- 151
+ ++ C YC +C G + S D +A + + EV G
Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAA-QGVREVNLLGQNVN 204
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ------RINPELIQCL-- 200
G+ S +L+ + I + +RF + PI R PEL+ L
Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264
Query: 201 ---KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ + + + + E+ A I +L A + S + G +
Sbjct: 265 PVQSGSDRILNLMGRTHTALEY----KAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320
Query: 258 MRTF---VELRIKPYYLHHPDLAAGTSHF--RLTIEE 289
V + ++ + + EE
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEE 357
>gi|126737723|ref|ZP_01753453.1| radical SAM domain protein [Roseobacter sp. SK209-2-6]
gi|126721116|gb|EBA17820.1| radical SAM domain protein [Roseobacter sp. SK209-2-6]
Length = 315
Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 55/141 (39%), Gaps = 4/141 (2%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGG 152
P+ + +C + C C+ + L++ + + L I+E+ I E+ FTGG
Sbjct: 32 PETLWFNTGTLCNIECENCYILSSPTNDALIYLNAAEVSSYLDQIEERCWPIREIGFTGG 91
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+P ++ + ++ L V IL R + R E + ++ + + +
Sbjct: 92 EPF-MNPEMIEMAESALERGFDVLILTNAMRPMMRKHMRSGLERLH--QKYPGKLTLRVS 148
Query: 213 ANHPYEFSEEAIAAISRLANA 233
+H E +A+ +
Sbjct: 149 LDHYTEAKHDAVRGVGSFKKT 169
>gi|332982488|ref|YP_004463929.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Mahella australiensis
50-1 BON]
gi|332700166|gb|AEE97107.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Mahella australiensis
50-1 BON]
Length = 443
Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 20/154 (12%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLS 127
I + +H + + R ++ + + C +C +C + G +
Sbjct: 122 ASRFTVVDIHEQDHEFDESMPIRRASKVSAWVTVMYGCNNFCTYCIVPYVRGREHSRRPD 181
Query: 128 S--KDTEAALA--YIQEKSQIWEVIFTGGDPLILSHKRLQ--KVLKTLRYIKHVQILRFH 181
+ + Y + V G D S ++++ +L+ L I+ V+ +RF
Sbjct: 182 DIVNEVKELADQGYKEITLLGQNVNSYGKD----SDEKVEFADLLRMLDDIEGVERIRFT 237
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ P+ ++ LI +++ K H H
Sbjct: 238 TS----HPKDLSDNLIYAMRDCKK----VCHQLH 263
>gi|268326277|emb|CBH39865.1| conserved hypothetical protein, radical SAM superfamily [uncultured
archaeon]
Length = 395
Score = 37.6 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 12/114 (10%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ ++ C + C C G L+ ++ A + I I +FTGG+PL
Sbjct: 76 HVVWEMTGRCNLDCIHC--HAFGGEASYDELTEEEGRALIDQIAA-LDIRSFVFTGGEPL 132
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ L ++ + I S + I E+ + L++ V I
Sbjct: 133 LRED--LFDLIAYAKSIG-------FSVFIATNGTLITKEVAKLLRKYNVGVVI 177
>gi|268325167|emb|CBH38755.1| conserved hypothetical protein, radical SAM superfamily [uncultured
archaeon]
Length = 395
Score = 37.6 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 12/114 (10%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ ++ C + C C G L+ ++ A + I I +FTGG+PL
Sbjct: 76 HVVWEMTGRCNLDCIHC--HAFGGEASYDELTEEEGRALIDQIAA-LDIRSFVFTGGEPL 132
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ L ++ + I S + I E+ + L++ V I
Sbjct: 133 LRED--LFDLIAYAKSIG-------FSVFIATNGTLITKEVAKLLRKYNVGVVI 177
>gi|28574490|ref|NP_788494.1| Mocs1, isoform C [Drosophila melanogaster]
gi|74865117|sp|Q8IQF1|MOCS1_DROME RecName: Full=Molybdenum cofactor biosynthesis protein 1; Includes:
RecName: Full=Molybdenum cofactor biosynthesis protein
A; Includes: RecName: Full=Molybdenum cofactor
biosynthesis protein C
gi|23093669|gb|AAN11896.1| Mocs1, isoform C [Drosophila melanogaster]
Length = 565
Score = 37.6 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y L C + C +C E V K +L++++ I + + +
Sbjct: 66 GRHHTYLRISL---TERCNLRCDYCMPAEGVPLQPKNKLLTTEEILRLAR-IFVEQGVRK 121
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ TGG+P + + +++ ++ + ++ + +
Sbjct: 122 IRLTGGEPTVRRD--IVEIVAQMKALPELEQIGITTNG 157
>gi|328955534|ref|YP_004372867.1| iron-only hydrogenase maturation protein HydG [Coriobacterium
glomerans PW2]
gi|328455858|gb|AEB07052.1| iron-only hydrogenase maturation protein HydG [Coriobacterium
glomerans PW2]
Length = 481
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 8/128 (6%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILL----KLLHVCPVYCRFCFRREMVGSQKGTVLS 127
E + I H Y +RI++ L + C C +C L+
Sbjct: 69 CEDPERIQRMYHLAKDIKQAFYGNRIVIFCPLYLSNYCVNGCVYCPYHAKNKHIPRKRLT 128
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSR 183
++ + +Q+ I G DP + + + + ++T+ IKH ++ + +
Sbjct: 129 QEEVAREVIALQDMGHKRLAIEAGEDPKMSPIEYILECIETIYAIKHKNGAIRRVNVNIA 188
Query: 184 VPIVDPQR 191
V+ R
Sbjct: 189 ATTVENYR 196
>gi|325960201|ref|YP_004291667.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
gi|325331633|gb|ADZ10695.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
Length = 349
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTG 151
P+ + + + + C C +C+R+ S+ G+ +S +D + L + ++++ G
Sbjct: 36 PELVDISISNYCTNDCDYCYRQ---SSETGSFMSIEDFQTCLEQLNNTKFGSVFQIALGG 92
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G+PL+ K+L+ R + + + + E + + P
Sbjct: 93 GEPLLHPD--FSKMLRLTREYNIIPNYTTSGKFFTEENLKTTRECCGAIAVSWDP 145
>gi|325265342|ref|ZP_08132066.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
gi|324029343|gb|EGB90634.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
Length = 440
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 15/128 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C +C +C ++ G+ + + Y+ E+ E
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNF--RSVPMEKLLKEAQYLAEQGVKELILVAQETTLY 203
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYI 209
G D I K L +LK L ++ ++ +R P+ I ELIQ +KE K Y+
Sbjct: 204 GKD--IYGEKSLHLLLKELCRVQGIRWIRV----LYCYPEEITDELIQVMKEEEKICHYL 257
Query: 210 AIHANHPY 217
+ H
Sbjct: 258 DLPIQHAN 265
>gi|257784457|ref|YP_003179674.1| pyruvate formate-lyase activating enzyme [Atopobium parvulum DSM
20469]
gi|257472964|gb|ACV51083.1| pyruvate formate-lyase activating enzyme [Atopobium parvulum DSM
20469]
Length = 260
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 71/197 (36%), Gaps = 25/197 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P L+ CP+ C +C + GT S K+ A + + + TGG+
Sbjct: 25 PGTRLVVFTQGCPMRCAYCHNPDTWQFGIGTETSVKEILATFNRNRAFYRNGGITATGGE 84
Query: 154 PLILSHKRLQKVLKTLRYIKH-VQILRFHS----RVPIVDPQRINPELIQCLKEAGKPVY 208
PL + + L H R H+ +P+ PE + + + V
Sbjct: 85 PLAQP-----EFVGALFEAAHNDPRGRIHTCLDSSGIAYNPE--TPEKFERILDNTDLVL 137
Query: 209 IAI-------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA------ 255
+ I H N SE +A L GI +L + V++ GI D E LA
Sbjct: 138 LDIKHSDPKGHINLCEVGSERPLAFGDELNRRGIKVLIRHVVVPGITDSAEELAGVGRII 197
Query: 256 NLMRTFVELRIKPYYLH 272
+ L + PY++
Sbjct: 198 AHWDNVIGLDVLPYHVM 214
>gi|227499809|ref|ZP_03929904.1| 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC 35098]
gi|227218113|gb|EEI83381.1| 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC 35098]
Length = 431
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 24/122 (19%)
Query: 95 DRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT- 150
R +K+ C +YC +C + R + S+ + + A K+ E++ T
Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNIVSRDMESIKEEAIRLA------KNGYKEIVLTG 195
Query: 151 ------GGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D L + KRL V++ + ++ +R S ++P+ I + ++ +K
Sbjct: 196 IHVASYGKD---LKNGKRLIDVIEEVAKTDGIERIRLSS----MEPRHITKDFLERMKAT 248
Query: 204 GK 205
K
Sbjct: 249 RK 250
>gi|195589405|ref|XP_002084442.1| GD14280 [Drosophila simulans]
gi|194196451|gb|EDX10027.1| GD14280 [Drosophila simulans]
Length = 331
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y L C + C +C E V K +L++++ I + + +
Sbjct: 12 GRHHTYLRISL---TERCNLRCDYCMPAEGVPLQPKNKLLTTEEILRLAR-IFVEQGVRK 67
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ TGG+P + + +++ ++ + ++ + +
Sbjct: 68 IRLTGGEPTVRRD--IVEIVAQMKALPELEQVGITTNG 103
>gi|295677633|ref|YP_003606157.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
CCGE1002]
gi|295437476|gb|ADG16646.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
CCGE1002]
Length = 461
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 36/160 (22%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG--- 151
+ ++ C YC +C V S+ + L I + EV G
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203
Query: 152 -------GDPLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
G L L + ++ + I ++ +R+ + P+ LI
Sbjct: 204 NAYRGKFGGALTLGSTEIADFATLIEYVADIPGIERIRYTTS----HPKEFTQRLIDTYA 259
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLA---NAGIILL 238
+ K + H + P R+ G +L
Sbjct: 260 KVPK---LVSHLHLP------VQHGSDRILMAMKRGYTVL 290
>gi|323692752|ref|ZP_08106980.1| hypothetical protein HMPREF9475_01843 [Clostridium symbiosum
WAL-14673]
gi|323503194|gb|EGB19028.1| hypothetical protein HMPREF9475_01843 [Clostridium symbiosum
WAL-14673]
Length = 436
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 29/138 (21%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ + ++ + E++ TG
Sbjct: 142 HTRAFIKVQDGCNQFCSYC-----IIPYTRGRVRSRAIGDVVKEVEGLAAAGYKEIVLTG 196
Query: 152 GDPLILSH----------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ LS + L ++ L I+ ++ +R S ++P+ I E + L
Sbjct: 197 ---IHLSSYGVDFSEEKRENLLSLITCLDKIQGIERIRLGS----LEPRIITEEFVSALA 249
Query: 202 -----EAGKPVYIAIHAN 214
+ + N
Sbjct: 250 GLKSICPHFHLSLQSGCN 267
>gi|307354668|ref|YP_003895719.1| Radical SAM domain-containing protein [Methanoplanus petrolearius
DSM 11571]
gi|307157901|gb|ADN37281.1| Radical SAM domain protein [Methanoplanus petrolearius DSM 11571]
Length = 456
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 9/105 (8%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYP---DRILLKLLHVCPVYCRFCFRREMVGSQKG 123
L+ L +D ++ LK +H+Y L+ H C + C +C+ M K
Sbjct: 54 LHELGIIVDDEADESKVYALKHNLHKYSTDTSSFLIFPTHSCNLRCPYCYETVMDIP-KS 112
Query: 124 TVLSSKDTEAALAYIQ----EKSQIWEVI-FTGGDPLILSHKRLQ 163
+ + A+I+ + V+ F GG+PL+ S L
Sbjct: 113 KSMDRETIARTKAFIKGMTLQNRSSRVVLGFYGGEPLLRSDICLD 157
>gi|291539783|emb|CBL12894.1| Predicted Fe-S oxidoreductases [Roseburia intestinalis XB6B4]
Length = 351
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 47/152 (30%), Gaps = 24/152 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ + C CR CF R L+ ++ + + + GG+PL+
Sbjct: 18 ITYNCNFRCRHCFNRSGEHCFGERELTDEELMKIIVEV-ADIAPRSLCICGGEPLLRKDI 76
Query: 161 RL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA------- 210
+ + + + S + + I E+ LKEAG
Sbjct: 77 LIKMGKYYTE--------KTSGRTSLNMVTNGFLITEEVADELKEAGFRTVQVSLDGASA 128
Query: 211 ----IHANHPYEFSEEAIAAISRLANAGIILL 238
N P F E A A+ L + G +
Sbjct: 129 ESHEWIRNQPGSF-ERAKEALRILVDRGFYVG 159
>gi|226324718|ref|ZP_03800236.1| hypothetical protein COPCOM_02504 [Coprococcus comes ATCC 27758]
gi|225207166|gb|EEG89520.1| hypothetical protein COPCOM_02504 [Coprococcus comes ATCC 27758]
Length = 446
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 21/163 (12%)
Query: 67 LNILPEERED---PIGDNNHSPLKGIVHRYPDR----ILLKLLHVCPVYCRFCFRREMVG 119
L+ P ER D + D ++ P+ HR LK+ C +C +C V
Sbjct: 116 LSDSPMERGDVRLTMKDVDYLPVTD-THRMVTTGGHFAYLKIAEGCDKHCTYCI-IPKVR 173
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK-----RLQKVLKTLRYIKH 174
+V E A + E+I + + RL ++L+ L I
Sbjct: 174 GDFRSVPMEHLLEEAQN--LADGGVKELILVAQETTMYGTDLYGEKRLPQLLRALCKISG 231
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
++ +R P+ I ELIQ +KE K Y+ + H
Sbjct: 232 LRWIRI----LYCYPEEITDELIQVIKEEPKICHYLDLPIQHA 270
>gi|158313105|ref|YP_001505613.1| molybdenum cofactor biosynthesis protein A [Frankia sp. EAN1pec]
gi|158108510|gb|ABW10707.1| molybdenum cofactor biosynthesis protein A [Frankia sp. EAN1pec]
Length = 328
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 68/206 (33%), Gaps = 17/206 (8%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS- 158
L C + C +C E + +L+ + + + + E+ TGG+P +
Sbjct: 18 LTDRCNLRCSYCMPAEGLDWLPNPLLLTDDEILRLVTIAVARLGVTEIRLTGGEPTLRPG 77
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCLKEAGKPVYIAI 211
RL + + L + + R + R+N L +
Sbjct: 78 LVRLVERMAALSPRPELSLTTNGLRLAGLAGPLAAAGLDRVNVSLDTL---RPERFARIT 134
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
N + + I + +VLL+G+NDD A L+R + + ++
Sbjct: 135 RRNR---LDDVLAGLAAAADAGLIPVKVNAVLLRGLNDD--EAAPLLRWCLARGYELRFI 189
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASL 297
L A R + +I+ L
Sbjct: 190 EQMPLDAQHGWRRTEMITAGEILTRL 215
>gi|238788764|ref|ZP_04632555.1| Molybdenum cofactor biosynthesis protein A [Yersinia frederiksenii
ATCC 33641]
gi|238723069|gb|EEQ14718.1| Molybdenum cofactor biosynthesis protein A [Yersinia frederiksenii
ATCC 33641]
Length = 326
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + LS + ++ TGG+P +
Sbjct: 19 ITDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRISRAF-ALLGTEKIRLTGGEPSMRRD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ T+R ++ L +
Sbjct: 77 -FTDIIATIRQNPAIRTLAVTTNG 99
>gi|326559922|gb|EGE10321.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
103P14B1]
gi|326566301|gb|EGE16452.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
12P80B1]
gi|326573891|gb|EGE23843.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
101P30B1]
gi|326577342|gb|EGE27229.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
O35E]
Length = 361
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C G + L+ ++ LA +V TGG+P I
Sbjct: 55 ITDFCNFRCNYCLPNGYQGKRPNNELTQQEIATLLAGFAA-LGTTKVRLTGGEPSIRHD- 112
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
L +++ ++ + ++ S
Sbjct: 113 -LPDLIRLIKNTEGIKTACISSNG 135
>gi|317485155|ref|ZP_07944037.1| thiazole biosynthesis protein ThiH [Bilophila wadsworthia 3_1_6]
gi|316923690|gb|EFV44894.1| thiazole biosynthesis protein ThiH [Bilophila wadsworthia 3_1_6]
Length = 472
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI++ + C C +C L+ +D + +Q+ I
Sbjct: 80 YGNRIVMFAPLYLSNYCINSCSYCPYHAKNKHIARKKLTQEDIVREVTALQDMGHKRLAI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR 191
+G DPL + + + ++T+ +KH ++ + + V+ R
Sbjct: 140 ESGEDPLNNPIEYILESIRTIYSVKHRNGSIRRVNVNIAATTVENYR 186
>gi|256389669|ref|YP_003111233.1| radical SAM domain-containing protein [Catenulispora acidiphila DSM
44928]
gi|256355895|gb|ACU69392.1| Radical SAM domain protein [Catenulispora acidiphila DSM 44928]
Length = 389
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIW-----EVIF 149
+LKL C + C +C+ E K +S + + I E EV+
Sbjct: 26 VLKLHSRCNLACSYCYIYEGPDQSWRDKPGTMSPETIALTASRIAEHVATHRPPWIEVVL 85
Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
GG+PL+ L+ +T+R
Sbjct: 86 HGGEPLMAGLPVLRNAAETIRA 107
>gi|125973165|ref|YP_001037075.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium thermocellum ATCC 27405]
gi|256003963|ref|ZP_05428949.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium thermocellum DSM 2360]
gi|281417360|ref|ZP_06248380.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium thermocellum JW20]
gi|125713390|gb|ABN51882.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium thermocellum ATCC 27405]
gi|255992091|gb|EEU02187.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium thermocellum DSM 2360]
gi|281408762|gb|EFB39020.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium thermocellum JW20]
gi|316940606|gb|ADU74640.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium thermocellum DSM 1313]
Length = 229
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ C + C +C + ++ + + + L ++ + I V+ +GG+P +
Sbjct: 19 AIVVFTPGCNMNCFYCHNKTLISGGNEEFIDNDEVLELL--VKRRGFIDGVVISGGEPTL 76
Query: 157 LSHKRLQKVLKTLRYI 172
L+ L+ ++ +
Sbjct: 77 QKD--LEGFLEKVKSL 90
>gi|326561208|gb|EGE11573.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
7169]
gi|326567905|gb|EGE18002.1| molybdenum cofactor biosynthesis protein A [Moraxella catarrhalis
BC1]
Length = 361
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C G + L+ ++ LA +V TGG+P I
Sbjct: 55 ITDFCNFRCNYCLPNGYQGKRPNNELTQQEIATLLAGFAA-LGTTKVRLTGGEPSIRHD- 112
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
L +++ ++ + ++ S
Sbjct: 113 -LPDLIRLIKNTEGIKTACISSNG 135
>gi|240949246|ref|ZP_04753590.1| molybdenum cofactor biosynthesis protein A [Actinobacillus minor
NM305]
gi|240296362|gb|EER47006.1| molybdenum cofactor biosynthesis protein A [Actinobacillus minor
NM305]
Length = 337
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 73/268 (27%), Gaps = 39/268 (14%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYIQ 139
NN + + +Y L VC C +C S + +
Sbjct: 10 NNSTLVDRFQRQYTYLRLSI-TDVCNFRCNYCLPDGYRPPSHKQTFLSVDEIQRVAQAF- 67
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
++ TGG+P L L+ + L ++ + + +R + EL
Sbjct: 68 ANLGTEKIRITGGEP-TLRKDFLE-IAHRLSQTAGIRQIALTTNG--YRMER-DVEL--- 119
Query: 200 LKEAGKPVYIAIHAN-HPYEFSE-------------EAIAAISRLANAGI-ILLSQSVLL 244
H N + I R G + +VL+
Sbjct: 120 -----WQQAGITHLNVSVDSLDPRQFHLITGENKLATVLNGIDRAFEIGYKKVKVNAVLM 174
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
K + I+ ++ + F+ GQ I+ L ++ G
Sbjct: 175 KQYTAKGLDDFLHWIK--DRPIQMRFIELMETGEMDHFFQQQHLSGQSILERLTQE--GW 230
Query: 305 -CQPFYILDLPGGYGKVKIDTHNIKKVG 331
QP + G KV ++G
Sbjct: 231 QLQPK---AMSDGPAKVLAHPDYQGEIG 255
>gi|223937516|ref|ZP_03629420.1| Radical SAM domain protein [bacterium Ellin514]
gi|223893867|gb|EEF60324.1| Radical SAM domain protein [bacterium Ellin514]
Length = 363
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 9/155 (5%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
+ +P EEL L + R I ++ + Y + +VC VYC+FC
Sbjct: 25 ALRLYHLPL-EELGALSDRRRQLIKAPAYNGHGNKIVTYIVDRNVNYTNVCNVYCKFCAF 83
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-- 172
V++ ++ + + ++ GG LQ L L +I
Sbjct: 84 YRTEKEDDSYVITHEEMDKKIEETIALGGTQ-ILMQGG---HHPKLSLQWYLDLLSHIKT 139
Query: 173 --KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ I F I + N L + + + K
Sbjct: 140 KFPQINIHGFSPSEFIHFREVFNLPLEEIISQFVK 174
>gi|121595917|ref|YP_987813.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acidovorax sp.
JS42]
gi|229890416|sp|A1WBW2|MIAB_ACISJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|120607997|gb|ABM43737.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidovorax sp. JS42]
Length = 448
Score = 37.6 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 53/321 (16%), Positives = 101/321 (31%), Gaps = 57/321 (17%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRI-----LLKLLHVCPVYCRFCFRREMVGS 120
EL + P D + ++ H P R+ + ++ C YC +C G
Sbjct: 111 ELLNARAAKARPQVDISFPEIEKFDHLPPARVEGASAFVSIMEGCSKYCSYCVVPYTRGE 170
Query: 121 QKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG----------GDPLILSHKRLQKVLKT 168
+ E L + + EV G GD + L +L+
Sbjct: 171 EVSRPF-----EDVLVEVAGLADQGVKEVTLLGQNVNAYLGAMGDTAEKADFAL--LLEY 223
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE---------- 218
+ I ++ +RF + P P LI+ + K + H + P +
Sbjct: 224 VAEIPGIERIRFTTS----HPNEFTPRLIEAYAKIPK---LVSHLHLPVQHGSDRILMAM 276
Query: 219 ---FSE-EAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRTFVELRIKPYYLHH 273
++ E + I +L + S + G + E +M+ ++R +
Sbjct: 277 KRGYTAMEYKSTIRKLRAIRPDMAMSSDFIVGFPGETEEDFQKMMKLIDDVRFDNSFSFI 336
Query: 274 PDLAAGTS----HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG-YGKV-KIDTHNI 327
GT H E + + L+ I+ IL++ G V ++ +
Sbjct: 337 FSPRPGTPAANLHDDTPHEVKLRRLQELQAVIN-----RNILEISQERVGTVQRLLVEGV 391
Query: 328 KKVGNGSYCITDHHNIVHDYP 348
K N V ++P
Sbjct: 392 SKRDGSELMGRTECNRVVNFP 412
>gi|310779510|ref|YP_003967843.1| MiaB-like tRNA modifying enzyme [Ilyobacter polytropus DSM 2926]
gi|309748833|gb|ADO83495.1| MiaB-like tRNA modifying enzyme [Ilyobacter polytropus DSM 2926]
Length = 437
Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 16/141 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R +K+ C +C +C G + L + A+ I K E+I G +
Sbjct: 147 SRAYIKIQDGCNNFCSYCKIPFARGKSRSRKL-KSILKEAV--ILAKEGFKEIIIIGINL 203
Query: 155 LILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ + +L + + ++ +R S + P +I+ I+ +K K +
Sbjct: 204 GVYGEDIPENGDFETLLDEISKVDGIERIRIGS----MYPDKISDRFIELMKNNSK---L 256
Query: 210 AIHAN-HPYEFSEEAIAAISR 229
H + +E + A++R
Sbjct: 257 MPHLHISLQSCDDEILKAMNR 277
>gi|295103489|emb|CBL01033.1| MiaB-like tRNA modifying enzyme [Faecalibacterium prausnitzii
SL3/3]
Length = 431
Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 16/118 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C G + + + A L + EV+ +
Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--AEESILAELHQLAAAGY-REVVLS--- 194
Query: 154 PLILSHKRLQ------KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L L ++++ + ++ +R S +DP + PE I L K
Sbjct: 195 AISLPSYGLDTGTNLVELVEKCAQVPGIERIRLGS----LDPDMLTPEFISRLAAVDK 248
>gi|160942971|ref|ZP_02090209.1| hypothetical protein FAEPRAM212_00448 [Faecalibacterium prausnitzii
M21/2]
gi|158445665|gb|EDP22668.1| hypothetical protein FAEPRAM212_00448 [Faecalibacterium prausnitzii
M21/2]
Length = 431
Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 16/118 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C G + + + A L + EV+ +
Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--AEESILAELHQLAAAGY-REVVLS--- 194
Query: 154 PLILSHKRLQ------KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L L ++++ + ++ +R S +DP + PE I L K
Sbjct: 195 AISLPSYGLDTGTNLVELVEKCAQVPGIERIRLGS----LDPDMLTPEFISRLAAVDK 248
>gi|121604594|ref|YP_981923.1| molybdenum cofactor biosynthesis protein A [Polaromonas
naphthalenivorans CJ2]
gi|120593563|gb|ABM37002.1| GTP cyclohydrolase subunit MoaA [Polaromonas naphthalenivorans CJ2]
Length = 376
Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C E+ + ++LS ++ + ++ TGG+PL
Sbjct: 49 VTDRCNFRCNYCMPSEVFDKNYAFLPQSSLLSFEEITRLATIFVAH-GVEKIRLTGGEPL 107
Query: 156 ILSH-KRLQKVLKTL 169
+ + + L ++L L
Sbjct: 108 LRKNLEVLIEMLARL 122
>gi|119871632|ref|YP_929639.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM
4184]
gi|119673040|gb|ABL87296.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184]
Length = 370
Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 68/202 (33%), Gaps = 23/202 (11%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-IF 149
H P + + CP+ C+ C R + + L++++ + + + + +
Sbjct: 12 HSAPLIVFWESTKACPLACKHC-RADAILKPLPGELNTEEGKRLIEQVASFGDPKPLLVI 70
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
TGGDPL+ + L ++ + + + +N E ++ ++E G
Sbjct: 71 TGGDPLMRND--LFDLIDYANQLG------VPTSLAPAVSPNLNQEALKAVREHGVKSIS 122
Query: 210 AIHANHPYEFSEEAIAAISRLANA----------GIILLSQSVLLKGINDDPEILANLMR 259
E +E + GI + +V+ + + +A L+
Sbjct: 123 ISLDGAREETHDELRGVAGSFRDTVAVIKTAVDMGIQVQVNTVVWRKSLTELPEVAKLIT 182
Query: 260 TFVELRIKPYYLHHPDLAAGTS 281
++ + + +A
Sbjct: 183 DL---GVRTWEVFFLIVAGRAK 201
>gi|323483779|ref|ZP_08089159.1| hypothetical protein HMPREF9474_00908 [Clostridium symbiosum
WAL-14163]
gi|323402970|gb|EGA95288.1| hypothetical protein HMPREF9474_00908 [Clostridium symbiosum
WAL-14163]
Length = 436
Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 29/138 (21%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ + ++ + E++ TG
Sbjct: 142 HTRAFIKVQDGCNQFCSYC-----IIPYTRGRVRSRAIGDVVKEVEGLAAAGYKEIVLTG 196
Query: 152 GDPLILSH----------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ LS + L ++ L I+ ++ +R S ++P+ I E + L
Sbjct: 197 ---IHLSSYGVDFPEEKRENLLSLITCLDKIQGIERIRLGS----LEPRIITEEFVSALA 249
Query: 202 -----EAGKPVYIAIHAN 214
+ + N
Sbjct: 250 GLKSICPHFHLSLQSGCN 267
>gi|317470624|ref|ZP_07930010.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
gi|316901915|gb|EFV23843.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
Length = 453
Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E +++S + + AL ++ E S EV F GG+PL
Sbjct: 96 LHIAHDCNLACRYCFAEEGEYHGDRSMMSFEVGKQALDFLVENSGSRRNLEVDFFGGEPL 155
Query: 156 IL--SHKRLQKVLKTLRYIKHVQILRFH 181
+ K+L ++L KH + RF
Sbjct: 156 MNFEVVKQLVAYGRSLEE-KHSKKFRFT 182
>gi|282162791|ref|YP_003355176.1| hypothetical protein MCP_0121 [Methanocella paludicola SANAE]
gi|282155105|dbj|BAI60193.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 392
Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 11/135 (8%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ- 121
K EL + +E P+ G++ R + I ++ + C + C FC E V
Sbjct: 60 TKRELVYVTKESGLPL---IGHTAFGLIDRGTNLIQVRPVSGCNLNCIFCSVDEGVSKSR 116
Query: 122 -KGTVLSSKDTEAALAYIQEKSQIWEVIFT---GGDPLILSHKRLQKVLKTLRYIKHVQI 177
++ + A + +V G+P I + ++L+ LR + HV++
Sbjct: 117 RTDYIVDTDYLVEEFAKLAALKG-DDVEAHIDGQGEPFIYPYMV--ELLEKLRKVPHVKV 173
Query: 178 LRFHSRVPIVDPQRI 192
+ + ++DP++I
Sbjct: 174 ISAQTNGMLLDPEKI 188
>gi|167746208|ref|ZP_02418335.1| hypothetical protein ANACAC_00913 [Anaerostipes caccae DSM 14662]
gi|167654201|gb|EDR98330.1| hypothetical protein ANACAC_00913 [Anaerostipes caccae DSM 14662]
Length = 442
Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E +++S + + AL ++ E S EV F GG+PL
Sbjct: 85 LHIAHDCNLACRYCFAEEGEYHGDRSMMSFEVGKQALDFLVENSGSRRNLEVDFFGGEPL 144
Query: 156 IL--SHKRLQKVLKTLRYIKHVQILRFH 181
+ K+L ++L KH + RF
Sbjct: 145 MNFEVVKQLVAYGRSLEE-KHSKKFRFT 171
>gi|28574488|ref|NP_788495.1| Mocs1, isoform A [Drosophila melanogaster]
gi|23093670|gb|AAF50108.2| Mocs1, isoform A [Drosophila melanogaster]
gi|90855631|gb|ABE01177.1| IP15954p [Drosophila melanogaster]
Length = 385
Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y L C + C +C E V K +L++++ I + + +
Sbjct: 66 GRHHTYLRISL---TERCNLRCDYCMPAEGVPLQPKNKLLTTEEILRLAR-IFVEQGVRK 121
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ TGG+P + + +++ ++ + ++ + +
Sbjct: 122 IRLTGGEPTVRRD--IVEIVAQMKALPELEQIGITTNG 157
>gi|256391490|ref|YP_003113054.1| molybdenum cofactor biosynthesis protein A [Catenulispora
acidiphila DSM 44928]
gi|256357716|gb|ACU71213.1| molybdenum cofactor biosynthesis protein A [Catenulispora
acidiphila DSM 44928]
Length = 329
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 29/212 (13%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + K +LS ++ + + ++ FTGG+PL+
Sbjct: 17 LTDRCNLRCTYCMPAEGLPWLPKAELLSDEEILRLIGIAVHLLGVDQIRFTGGEPLVRP- 75
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L ++ + + + + + L LK+AG
Sbjct: 76 -GLATLVARVAQLDPRPRISLTTNALGL------ARLAPTLKDAGLDRVNV----SLDTL 124
Query: 220 SEEA-IAAISRLANAGI-------------ILLSQSVLLKGINDDPEILANLMRTFVELR 265
R A + + SVL++G+ND L+R +E
Sbjct: 125 DPAVFRELTRRDRFADVVAGLEAAAAAGLTPVKVNSVLMRGVNDT--EAPALLRWCLERG 182
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+ ++ L A R + ++I+A+L
Sbjct: 183 YELRFIEQMPLDAQHGWDRQQMVTAEEILATL 214
>gi|229082873|ref|ZP_04215297.1| antilisterial bacteriocin (subtilosin) production [Bacillus cereus
Rock4-2]
gi|228700411|gb|EEL52973.1| antilisterial bacteriocin (subtilosin) production [Bacillus cereus
Rock4-2]
Length = 462
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP +++ + C V CR C+ G+ K V+S ++ L + + + TGG
Sbjct: 122 YPKVASIEITNRCNVRCRHCY--GDFGAVKPKVMSLDQIKSLLDDL-NNIGVKLIELTGG 178
Query: 153 D 153
D
Sbjct: 179 D 179
>gi|221642191|ref|YP_002533278.1| ywiA protein [Bacillus cereus Q1]
gi|221243126|gb|ACM15835.1| ywiA protein [Bacillus cereus Q1]
Length = 462
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP +++ + C V CR C+ G+ K V+S ++ L + + + TGG
Sbjct: 122 YPKVASIEITNRCNVRCRHCY--GDFGAVKPKVMSLDQIKSLLDDL-NNIGVKLIELTGG 178
Query: 153 D 153
D
Sbjct: 179 D 179
>gi|206973072|ref|ZP_03233994.1| radical SAM domain protein [Bacillus cereus AH1134]
gi|206731956|gb|EDZ49156.1| radical SAM domain protein [Bacillus cereus AH1134]
gi|262358192|gb|ACY56718.1| ThnB [Bacillus thuringiensis]
Length = 459
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP +++ + C V CR C+ G+ K V+S ++ L + + + TGG
Sbjct: 119 YPKVASIEITNRCNVRCRHCY--GDFGAVKPKVMSLDQIKSLLDDL-NNIGVKLIELTGG 175
Query: 153 D 153
D
Sbjct: 176 D 176
>gi|83590234|ref|YP_430243.1| radical SAM family protein [Moorella thermoacetica ATCC 39073]
gi|83573148|gb|ABC19700.1| Radical SAM [Moorella thermoacetica ATCC 39073]
Length = 441
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIF 149
+ + + C +C FCF G + + +D A L Y+Q ++ V
Sbjct: 86 QKGVGSLTFFISLQCHRHCFFCFNPNQEG-YEYYTHNQRDCLAELEYLQRTGQEMKHVAL 144
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHV 175
TGG+PL+ + L V
Sbjct: 145 TGGEPLLHPEETLAFFRAAKEKFPGV 170
>gi|187735295|ref|YP_001877407.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835]
gi|187425347|gb|ACD04626.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835]
Length = 353
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 27/224 (12%), Positives = 68/224 (30%), Gaps = 33/224 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ C + CR C + + + + + ++ TGGD
Sbjct: 14 PFLVFWEVTRACALACRHCRAVAQPRPHPDELTHEEALRLIDQLAELRPPM--LVLTGGD 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI----QCLKEAGKPVYI 209
P++ I + + + L+ LKEAG +
Sbjct: 72 PVMRPD------------ILELVRAASGKGLHVALSPAATARLLHTDFHALKEAGVQ-SM 118
Query: 210 AIHANHPYEFSEEAIAAI-----------SRLANAGIILLSQSVLLKGINDDPEILANLM 258
++ + +E + +A + AG+ L + + + + + L+
Sbjct: 119 SLSLDGAHESTHDAFRGVPHTYERTLRAAEMAKEAGMHLQINTTITRSTLGEFDDFVELV 178
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
+ ++ + + + + E + V +IS
Sbjct: 179 KK---MKPGMWSVFLLVPTGRAAMDEMPAAEDVEAVWKKLSRIS 219
>gi|238799256|ref|ZP_04642702.1| Molybdenum cofactor biosynthesis protein A [Yersinia mollaretii
ATCC 43969]
gi|238716890|gb|EEQ08760.1| Molybdenum cofactor biosynthesis protein A [Yersinia mollaretii
ATCC 43969]
Length = 326
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 54/172 (31%), Gaps = 7/172 (4%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C + LS + ++ TGG+P +
Sbjct: 19 ITDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRVSRAF-ALLGTEKIRLTGGEPSMRRD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV--PIVDPQRINPELIQCLKEAGKPV-YIAIHANHPY 217
++ T+R ++ L + D + + + + + HA
Sbjct: 77 -FTDIIATIRQNPAIRTLAVTTNGYRLARDAAQWREAGLTAINVSVDSLDPRQFHAITGQ 135
Query: 218 EFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ + + I AG + +VL++ +ND ++++
Sbjct: 136 DKFHQVMQGIDAAFEAGFDKVKINAVLMRDVNDRHLSAFLNWIKLRPIQLRF 187
>gi|331084033|ref|ZP_08333140.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Lachnospiraceae bacterium 6_1_63FAA]
gi|330402395|gb|EGG81965.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Lachnospiraceae bacterium 6_1_63FAA]
Length = 491
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 53/127 (41%), Gaps = 22/127 (17%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ +YP + + ++ C +C +C + G + + KD + + + + EV+
Sbjct: 193 VERKYPFKSGVNIMFGCNNFCSYCIVPYVRG--RERSRNPKDIVREIERLVKDGVV-EVM 249
Query: 149 FTGG----------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
G +P+ ++L + I+ ++ +RF P+ ++ ELI+
Sbjct: 250 LLGQNVNSYGKNLDEPMT-----FAQLLTEIEKIEGLKRIRF----MTSHPKDLSDELIE 300
Query: 199 CLKEAGK 205
+K + K
Sbjct: 301 VMKNSKK 307
>gi|148726099|emb|CAN88173.1| novel protein (zgc:86860) [Danio rerio]
Length = 578
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 214 NHPYEFSEEAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
N+P E +A+ + L + G+ +L+ + + + +D E +L E+ P Y
Sbjct: 25 NNPQEIDPDALVHLKPLKSGGVTTVAVLNSAPEVA-VKEDVETGVHLDPALKEVSYNPTY 83
Query: 271 LHHPDL-AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
+ FR + +A+ + +SG +P ++ D
Sbjct: 84 ETMFAPEFGPMNPFRS------QQMAAPRNMLSGYAEPAHVND 120
>gi|58000457|ref|NP_001009990.1| pre-mRNA-processing factor 17 [Danio rerio]
gi|56972114|gb|AAH88381.1| Cell division cycle 40 homolog (S. cerevisiae) [Danio rerio]
Length = 578
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 214 NHPYEFSEEAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
N+P E +A+ + L + G+ +L+ + + + +D E +L E+ P Y
Sbjct: 25 NNPQEIDPDALVHLKPLKSGGVTTVAVLNSAPEVA-VKEDVETGVHLDPALKEVSYNPTY 83
Query: 271 LHHPDL-AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
+ FR + +A+ + +SG +P ++ D
Sbjct: 84 ETMFAPEFGPMNPFRS------QQMAAPRNMLSGYAEPAHVND 120
>gi|146296852|ref|YP_001180623.1| RNA modification protein [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410428|gb|ABP67432.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 434
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 28/234 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C +C +C GS LSS + + E + TG
Sbjct: 141 RTRAFIKIEEGCEQFCSYCIIPYARGSVVSRSLSS--ILDEVQRLASNGY-KEFVITGIN 197
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGK 205
D + L V++ + I+ V+ +R S PIV + L++ K
Sbjct: 198 ISAYGKD--LDYKVTLVDVIEEISKIEKVRRIRLSSLEPIVMKEDFIKRLVKIEKLCHHL 255
Query: 206 PVYIAIHANHPYEF------SEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLM 258
+ + ++ + ++E + + + + ++ G + E +
Sbjct: 256 HLSLQSGSDKILKLMNRHYTTDEYRQIVEMVRGYWNDVAFTTDIIVGFPGESDEDFERTV 315
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTI-------EEGQKIVASLKEKIS-GL 304
E+ ++ GT+ + + E+ +I+ S+ K+S G
Sbjct: 316 EFVKEIGFSRIHVFRFSPKKGTNAYNMPYQVNSAEKEKRSEILKSVARKLSFGF 369
>gi|134291405|ref|YP_001115174.1| nitrogenase cofactor biosynthesis protein NifB [Burkholderia
vietnamiensis G4]
gi|134134594|gb|ABO58919.1| nitrogenase cofactor biosynthesis protein NifB [Burkholderia
vietnamiensis G4]
Length = 530
Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 66/229 (28%), Gaps = 30/229 (13%)
Query: 71 PEEREDPIGDN-NHSPLKGIV-HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQK 122
P++ I + + P H + R+ + + C + C +C R+ G
Sbjct: 54 PDDMPAEIWEKVKNHPCYSEEAHHHYARMHVAVAPACNIQCNYCNRKYDCSNESRPGVVS 113
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + +A E Q+ + G GD L K +++
Sbjct: 114 QKLTPEQAVKKVVAVASEIPQMTVLGIAGPGDSLANPQKTFDTFRMLQEQAPDIKLC-LS 172
Query: 182 SRVPI------------VDPQRINPELIQ------CLKEAGKPVYIAIHANHPYEFSEEA 223
+ +D I ++ E+
Sbjct: 173 TNGLALPALVDEICRYNIDHVTITINMVDPAVGAKIYPWIFWDHRRVTGYEAAQILHEQQ 232
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+ + L G++ SVL+ G+ND+ I R + + +
Sbjct: 233 MKGLEMLTARGVLTKINSVLIPGVNDEHLIEV--NREVKKRGAFLHNIM 279
>gi|298290503|ref|YP_003692442.1| quinolinate synthetase complex, subunit alpha [Starkeya novella DSM
506]
gi|296927014|gb|ADH87823.1| quinolinate synthetase complex, A subunit [Starkeya novella DSM
506]
Length = 356
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+L + L + ++ + + ++++ + + +R P+ I+ L+E V + H
Sbjct: 200 LMLPDEYLARNVQ--KEVPEIELIAW--KGHCEVHERFTPQDIRDLRENHPGVVVLAHPE 255
Query: 215 HPYEFSEEA 223
P E A
Sbjct: 256 CPPEVVAAA 264
>gi|255658436|ref|ZP_05403845.1| organic radical activating enzyme family protein [Mitsuokella
multacida DSM 20544]
gi|260849772|gb|EEX69779.1| organic radical activating enzyme family protein [Mitsuokella
multacida DSM 20544]
Length = 213
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P L L CP C C E+ +Q G LS + + L + + V+ TGGD
Sbjct: 21 PGNRLGIWLAGCPRRCPGCSNPELWQAQAGQALSQERLQELLRPFLSREDLGGVVVTGGD 80
Query: 154 PLILSHKRL 162
P + L
Sbjct: 81 PFFQADALL 89
>gi|168181754|ref|ZP_02616418.1| radical SAM domain protein [Clostridium botulinum Bf]
gi|237796520|ref|YP_002864072.1| radical SAM domain-containing protein [Clostridium botulinum Ba4
str. 657]
gi|182675181|gb|EDT87142.1| radical SAM domain protein [Clostridium botulinum Bf]
gi|229261283|gb|ACQ52316.1| radical SAM domain protein [Clostridium botulinum Ba4 str. 657]
Length = 455
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLIL 157
+ H C + C++CF E K ++S + A+ ++ EKS EV GG+PL +
Sbjct: 101 IAHDCNLRCKYCFADEGEYKGKRELMSPGVGKKAIDFVIEKSGPRKNIEVDLFGGEPL-M 159
Query: 158 SHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ ++++++ + + H + +RF + +N E++ L + + + +
Sbjct: 160 AFSTIKEIVEYAKEQEEKHNKTIRFT---MTTNGTLLNQEIMDYLDKNMGNIVL--SIDG 214
Query: 216 PYEFSEEAIAAIS 228
E ++ +
Sbjct: 215 RKEINDNVRVRVD 227
>gi|168179558|ref|ZP_02614222.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
gi|226950493|ref|YP_002805584.1| radical SAM domain-containing protein [Clostridium botulinum A2
str. Kyoto]
gi|182669661|gb|EDT81637.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
gi|226843376|gb|ACO86042.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto]
Length = 455
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLIL 157
+ H C + C++CF E K ++S + A+ ++ EKS EV GG+PL +
Sbjct: 101 IAHDCNLRCKYCFADEGEYKGKRELMSPGVGKKAIDFVIEKSGPRKNIEVDLFGGEPL-M 159
Query: 158 SHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ ++++++ + + H + +RF + +N E++ L + + + +
Sbjct: 160 AFSTIKEIVEYAKEQEEKHNKTIRFT---MTTNGTLLNQEIMDYLDKNMGNIVL--SIDG 214
Query: 216 PYEFSEEAIAAIS 228
E ++ +
Sbjct: 215 RKEINDNVRVRVD 227
>gi|117918731|ref|YP_867923.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. ANA-3]
gi|117611063|gb|ABK46517.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. ANA-3]
Length = 337
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 79/213 (37%), Gaps = 25/213 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C + K LS + E ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPNGKQQFLSLSEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAQEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELR---I 266
+ + +E + I +AG + +VLLKG+ND +L R ++ I
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND-----KDLPRFLNWIKHTPI 194
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
++ + G +F+ G I A L+
Sbjct: 195 DLRFIELMETGLGREYFQAHHLAGADIKAQLQA 227
>gi|300087511|ref|YP_003758033.1| radical SAM domain-containing protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527244|gb|ADJ25712.1| Radical SAM domain protein [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 326
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 17/167 (10%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYI 138
+ + + D + L + C CR C +VGS + G + A L +
Sbjct: 16 EWLAEVKPDVEPKCIDTLWLNITTRCNQSCRHC---HVVGSREAGDQMGHGILSACLELL 72
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR-----------FHSRVPIV 187
+ + I V TGG P + + + ++ L + ++R R
Sbjct: 73 RREPGITTVDITGGAPEL--NPLFESLVSALSEMGKRIVVRHNLTVTLDGDSVGGRSLAH 130
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
P ++ L A ++I ++ RL +AG
Sbjct: 131 LPGFFAAHRVEILASLPSCQPTVTDAIRGRRVFAKSIESLKRLRDAG 177
>gi|212712166|ref|ZP_03320294.1| hypothetical protein PROVALCAL_03248 [Providencia alcalifaciens DSM
30120]
gi|212685213|gb|EEB44741.1| hypothetical protein PROVALCAL_03248 [Providencia alcalifaciens DSM
30120]
Length = 326
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 28/84 (33%), Gaps = 3/84 (3%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C +C S + L+ + E +V TGG+P +
Sbjct: 19 ITDVCNFRCTYCLPDGYKPSGRHEFLTLDEIRRVSRAFAE-LGTEKVRITGGEPTMRKD- 76
Query: 161 RLQKVLKTLRYIKHVQILRFHSRV 184
++ ++ ++ + +
Sbjct: 77 -FTDIIAAIKENDSIKKIAVTTNG 99
>gi|288940181|ref|YP_003442421.1| MiaB-like tRNA modifying enzyme [Allochromatium vinosum DSM 180]
gi|288895553|gb|ADC61389.1| MiaB-like tRNA modifying enzyme [Allochromatium vinosum DSM 180]
Length = 469
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 43/128 (33%), Gaps = 12/128 (9%)
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS-- 128
P N + R R +K+ C C FC + G ++ L
Sbjct: 138 DSGLPHPSATNAMDLAAPLFARGRQRAFVKIQDGCRYQCTFCVTTQARGPERSRPLPEIV 197
Query: 129 KDTEAALAYIQEKSQIWEVIFTG----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
++ E + S I EV+ TG G L L +++ L + LR S
Sbjct: 198 REVERF-----QDSGIREVVLTGVHLGGYGADLGTD-LTHLIERLLNETAIPRLRLGSLE 251
Query: 185 PIVDPQRI 192
P P+R
Sbjct: 252 PWDLPERF 259
>gi|164687312|ref|ZP_02211340.1| hypothetical protein CLOBAR_00953 [Clostridium bartlettii DSM
16795]
gi|164603736|gb|EDQ97201.1| hypothetical protein CLOBAR_00953 [Clostridium bartlettii DSM
16795]
Length = 476
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Query: 91 HRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
Y +RI++ + C C +C + L+ + + +Q+
Sbjct: 79 RFYGNRIVMFAPLYLSNYCVNGCVYCPYHAKNKTIARKKLTQDEIRREVIALQDMGHKRL 138
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR 191
+ G DP+ + + + + T+ IKH ++ + + V+ R
Sbjct: 139 ALEAGEDPVNNPIEYILECINTIYSIKHKNGAIRRVNVNIAATTVENYR 187
>gi|148381015|ref|YP_001255556.1| radical SAM domain protein [Clostridium botulinum A str. ATCC 3502]
gi|153931936|ref|YP_001385386.1| radical SAM domain-containing protein [Clostridium botulinum A str.
ATCC 19397]
gi|153935318|ref|YP_001388793.1| radical SAM domain-containing protein [Clostridium botulinum A str.
Hall]
gi|148290499|emb|CAL84627.1| putative radical SAM protein [Clostridium botulinum A str. ATCC
3502]
gi|152927980|gb|ABS33480.1| radical SAM domain protein [Clostridium botulinum A str. ATCC
19397]
gi|152931232|gb|ABS36731.1| radical SAM domain protein [Clostridium botulinum A str. Hall]
Length = 455
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLIL 157
+ H C + C++CF E K ++S + A+ ++ EKS EV GG+PL +
Sbjct: 101 IAHDCNLRCKYCFADEGEYKGKRELMSPGVGKKAIDFVIEKSGPRKNIEVDLFGGEPL-M 159
Query: 158 SHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ ++++++ + + H + +RF + +N E+++ L + + + +
Sbjct: 160 AFSTIKEIVEYAKEQEEKHNKTIRFT---MTTNGTLLNQEIMEYLDKNMGNIVL--SIDG 214
Query: 216 PYEFSEEAIAAIS 228
E ++ +
Sbjct: 215 RKEINDNVRVRVD 227
>gi|117530299|ref|YP_851142.1| putative Fe-S oxidoreductase [Microcystis phage Ma-LMM01]
gi|117165911|dbj|BAF36219.1| putative Fe-S oxidoreductase [Microcystis phage Ma-LMM01]
Length = 305
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 12/112 (10%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP I +K+ C + C++C D L + + E+ GG
Sbjct: 41 YPCSIDIKITDYCDMGCKYC------HESSTRSGKHADLTRLLDILSDIPAGVELANGGG 94
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFH-SRVPIVDPQRINPELIQCL 200
+PL + L L+ I ++ + + H R + ++ EL++ L
Sbjct: 95 NPLSHPD--IVDYLVELKARGLIANITVNQGHLHRYATLIEDIVSRELVRGL 144
>gi|239941362|ref|ZP_04693299.1| hypothetical protein SrosN15_10231 [Streptomyces roseosporus NRRL
15998]
gi|291444804|ref|ZP_06584194.1| predicted protein [Streptomyces roseosporus NRRL 15998]
gi|291347751|gb|EFE74655.1| predicted protein [Streptomyces roseosporus NRRL 15998]
Length = 351
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL L CP+ C C G E + E+++ V+ TGG+PL+
Sbjct: 17 LLLGLTRRCPLSCAHC--STGSGPLTRQQPDPAQLERFVGSFTEENRPDVVMLTGGEPLL 74
Query: 157 LSHKRLQKVLKTLRY 171
L L + L TL
Sbjct: 75 LPA--LAERLSTLAR 87
>gi|196041174|ref|ZP_03108469.1| putative coenzyme PQQ synthesis protein [Bacillus cereus
NVH0597-99]
gi|196027882|gb|EDX66494.1| putative coenzyme PQQ synthesis protein [Bacillus cereus
NVH0597-99]
Length = 377
Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 23/204 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E ++FTGGD
Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHSLELTFEEGKKLIDDIYEMENPM-LVFTGGD 66
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----GKPVY 208
PL+ + K V++ S P V + I L G
Sbjct: 67 PLMRPDV---YDIAEYAVKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGPTAE 123
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
I H + + AI L I + +V+ D E +A L+
Sbjct: 124 IHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEEL------- 176
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQK 292
+ + F + I G++
Sbjct: 177 ------ECVLWSIFFLVPIGRGKE 194
>gi|239987825|ref|ZP_04708489.1| hypothetical protein SrosN1_11005 [Streptomyces roseosporus NRRL
11379]
Length = 339
Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL L CP+ C C G E + E+++ V+ TGG+PL+
Sbjct: 17 LLLGLTRRCPLSCAHC--STGSGPLTRQQPDPAQLERFVGSFTEENRPDVVMLTGGEPLL 74
Query: 157 LSHKRLQKVLKTLRY 171
L L + L TL
Sbjct: 75 LPA--LAERLSTLAR 87
>gi|288553123|ref|YP_003425058.1| molybdenum cofactor biosynthesis protein A [Bacillus pseudofirmus
OF4]
gi|288544283|gb|ADC48166.1| molybdenum cofactor biosynthesis protein A [Bacillus pseudofirmus
OF4]
Length = 307
Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 23/153 (15%)
Query: 113 FRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
+E+ G K +LS ++ + S I ++ TGG+PL+ + +++
Sbjct: 1 MPKEVFGPDYPFLKKDELLSFEEITRLTTLFTKASSIEKLRITGGEPLMRKD--VDQLID 58
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--HANHPY--EFS--- 220
LR + + + ++ P++ LKEAG N E +
Sbjct: 59 QLRRATKIDDIAMTTNGVML------PKMASRLKEAGLKRVTVSLDSLNDKRFGEINGRG 112
Query: 221 ---EEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ + + A AG+ + V+ KG+ND
Sbjct: 113 IGVDQVLKGMDAAAEAGLGVKVNMVVQKGVNDH 145
>gi|260427313|ref|ZP_05781292.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citreicella sp. SE45]
gi|260421805|gb|EEX15056.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citreicella sp. SE45]
Length = 435
Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 39/106 (36%), Gaps = 9/106 (8%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
L + C +C FC G++ + + + A ++ + E+ G +
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRVLTEARDLVER--GVREITLLGQNVN 206
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ L +++ L I ++ +RF + P ++ LI
Sbjct: 207 AYHGHDRGLAGLIRELAAIDGLERIRFTTS----HPNDMDDALIAA 248
>gi|225389074|ref|ZP_03758798.1| hypothetical protein CLOSTASPAR_02820 [Clostridium asparagiforme
DSM 15981]
gi|225044863|gb|EEG55109.1| hypothetical protein CLOSTASPAR_02820 [Clostridium asparagiforme
DSM 15981]
Length = 451
Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 66/194 (34%), Gaps = 27/194 (13%)
Query: 99 LKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTGGDP 154
LK+ C C +C + R S L + + A ++E + E G D
Sbjct: 154 LKIAEGCDKRCTYCIIPYLRGSFRSVPMEQLVREAGQLAEQGVKELILVAQETTLYGKD- 212
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA 213
+ K L K+L L + +Q +R P+ I ELI+ ++ K Y+ I
Sbjct: 213 -LYGEKALPKLLHELAKVPGIQWIRLQ----YCYPEEITDELIEAIRTEEKVCHYLDIPI 267
Query: 214 NHP----------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV- 262
H + I+RL + ++ L+ G + + + FV
Sbjct: 268 QHASDGILRRMGRRTNQAQLREMIARLRREIPDIALRTTLISGFPGETQEDHEELMAFVD 327
Query: 263 -----ELRIKPYYL 271
L + Y
Sbjct: 328 EMEFERLGVFAYSA 341
>gi|189465617|ref|ZP_03014402.1| hypothetical protein BACINT_01975 [Bacteroides intestinalis DSM
17393]
gi|189437891|gb|EDV06876.1| hypothetical protein BACINT_01975 [Bacteroides intestinalis DSM
17393]
Length = 432
Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 79/238 (33%), Gaps = 42/238 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ K E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPV--EEILDEVRYLVNKGVKEFQIIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + + L ++++ + I V+ +R H P +L + ++E Y+
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERPNVCKYM 249
Query: 210 AIHANHP---------YEFS-EEAIAAISRLANA--GIILLSQSVLLKG----INDDPEI 253
I H + EE I + GI L + L+ G D E
Sbjct: 250 DIALQHISNSMLEKMRRHVTQEETYQLIEQFRKEVPGIHLR--TTLMVGHPGETESDFEE 307
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHF---------RLTIEEGQKIVASLKEKIS 302
L +R R+ + + +H+ + ++E I + ++S
Sbjct: 308 LKEFVRKVRFDRMGAFAYSEEEGTYAAAHYEDEIPQEVKQARLDELMSIQQGISAELS 365
>gi|119896814|ref|YP_932027.1| nitrogen fixation protein [Azoarcus sp. BH72]
gi|119669227|emb|CAL93140.1| nitrogen fixation protein [Azoarcus sp. BH72]
Length = 498
Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 40/193 (20%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H Y R+ + + C + C +C R+ G + + + LA Q+
Sbjct: 52 HHYFARMHVAVAPACNIQCNYCNRKYDCSNESRPGVVSEVMSPDQAVKKTLAVAAAIPQM 111
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ G GDPL + + + +++ + + PE + L +
Sbjct: 112 TVLGIAGPGDPLANPERTFETFRRLSEEAPDIKLC-VSTNGLSL------PESVDELAKH 164
Query: 204 GKPVYIAIHANH-------------------------PYEFSEEAIAAISRLANAGIILL 238
N E+ + L + GI++
Sbjct: 165 NIDHVTIT-INCVDPEIGAKIYPWIFWENKRIFGVEGAKILIEQQQKGLEMLTSRGILVK 223
Query: 239 SQSVLLKGINDDP 251
SV++ GIND+
Sbjct: 224 VNSVMIPGINDEH 236
>gi|260437940|ref|ZP_05791756.1| radical SAM domain protein [Butyrivibrio crossotus DSM 2876]
gi|292809691|gb|EFF68896.1| radical SAM domain protein [Butyrivibrio crossotus DSM 2876]
Length = 468
Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF E + ++S++ + AL ++ S EV F GG+PL
Sbjct: 100 LHIAHDCNLACKYCFAEEGEYHGRRALMSAEVGKKALDFLVANSGKRRNLEVDFFGGEPL 159
Query: 156 I--LSHKRLQKVLKTLRYIKHVQILRFH 181
+ K + + + L +H ++ RF
Sbjct: 160 MNFGVVKEIVEYGRQLEK-EHDKLFRFT 186
>gi|198465488|ref|XP_001353651.2| GA17248 [Drosophila pseudoobscura pseudoobscura]
gi|198150181|gb|EAL31165.2| GA17248 [Drosophila pseudoobscura pseudoobscura]
Length = 376
Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKS 142
+ G H Y L C + C +C + V K +L++++ I K
Sbjct: 54 TDTFGRHHTYLRISL---TERCNLRCDYCMPADGVPLQPKANLLTTEEIIRLAR-IFVKQ 109
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ ++ TGG+P + + ++ ++ + ++ + +
Sbjct: 110 GVRKIRLTGGEPTVRRD--IVDMVAEMKALPQLEHVGITTNG 149
>gi|127514323|ref|YP_001095520.1| radical SAM domain-containing protein [Shewanella loihica PV-4]
gi|126639618|gb|ABO25261.1| Radical SAM domain protein [Shewanella loihica PV-4]
Length = 292
Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 17/158 (10%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++L++ + C C FC Q K E Q I V GD +
Sbjct: 18 LILQVTNGCSWNRCHFCDMYTAPQKQFRAQKIDKIAEDIQRVAQRNLSISRVFLADGDAM 77
Query: 156 ILSHKRLQKVLKTLRYIKHV-QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L RL+ + +R H+ Q+ R S + + L+E G + +
Sbjct: 78 SLPFNRLEAICLLIRE--HLPQVTRISSYCLPRNLNNKTDAQLARLRELGLSLLYVGCES 135
Query: 215 HPYEF---------SEEAIAAISRLANAG----IILLS 239
E + ++ A+ R+ AG +++L+
Sbjct: 136 GDDEVLARIEKGETFDSSLLALQRIRAAGMKSSVMILN 173
>gi|268680305|ref|YP_003304736.1| radical SAM protein [Sulfurospirillum deleyianum DSM 6946]
gi|268618336|gb|ACZ12701.1| Radical SAM domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 354
Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 10/111 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
++C C+FC + +S + +AL + S I EV H
Sbjct: 55 PTNICKDICKFCAFSANRKNPNPYTMSHDEILSALENTLKHSPITEVHIVSA---HNPHT 111
Query: 161 RLQKVLKTLRYI----KHVQILRFHSRVPIVDPQRI---NPELIQCLKEAG 204
L L+ I + + + + ELI + E G
Sbjct: 112 GLAWYLEIFSKIKERFPSLHVKALTAAEINFLATQYGLSFDELIDKMIEHG 162
>gi|213023904|ref|ZP_03338351.1| hypothetical protein Salmonelentericaenterica_15757 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 30
Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
+SG P ++ G K +D
Sbjct: 1 MVSGYMVPRLAREIGGEPSKTPLD 24
>gi|255011302|ref|ZP_05283428.1| thiamine biosynthesis protein ThiH [Bacteroides fragilis 3_1_12]
gi|313149113|ref|ZP_07811306.1| thiamine biosynthesis protein ThiH [Bacteroides fragilis 3_1_12]
gi|313137880|gb|EFR55240.1| thiamine biosynthesis protein ThiH [Bacteroides fragilis 3_1_12]
Length = 472
Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 52/138 (37%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E IL E E+ + + K I + Y +RI++ + C C +C
Sbjct: 49 THREAAILLECVEEDLTEEIFRLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
+ L+ ++ + +Q+ + G DP+ S + + ++T+ I H
Sbjct: 109 NKTIARKKLTQEEIRREVIALQDMGHKRLALEAGEDPVRNSIDYILESIRTIYSIHHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 169 AIRRVNVNIAATTVENYR 186
>gi|238018952|ref|ZP_04599378.1| hypothetical protein VEIDISOL_00812 [Veillonella dispar ATCC 17748]
gi|237864436|gb|EEP65726.1| hypothetical protein VEIDISOL_00812 [Veillonella dispar ATCC 17748]
Length = 472
Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + ++ VI
Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQNQIREEVIALEAMGHKRIVI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+G DPL L+ +L++++ I ++
Sbjct: 140 ESGEDPLNNP---LEYILESIKTIYGIKNK 166
>gi|167764860|ref|ZP_02436981.1| hypothetical protein BACSTE_03252 [Bacteroides stercoris ATCC
43183]
gi|167697529|gb|EDS14108.1| hypothetical protein BACSTE_03252 [Bacteroides stercoris ATCC
43183]
Length = 440
Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 15/168 (8%)
Query: 67 LNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
L + S R LK+ C YC +C G +
Sbjct: 120 LRKHESGEAHTSALKDIRSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTIPFARGRSRNGS 179
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++S E A E++ TG GD + + ++K L ++ ++ R S
Sbjct: 180 IAS-LVEQARQ--AAAEGGKEIVLTGVNIGDFGKSTGETFFDLVKALDDVECIERYRISS 236
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
++P + E+I+ + + + H + P S+E + + R
Sbjct: 237 ----IEPNLLTDEIIEFVSRSKR---FMPHFHIPLQSGSDEVLKLMRR 277
>gi|33595784|ref|NP_883427.1| molybdenum cofactor biosynthesis protein A [Bordetella
parapertussis 12822]
gi|33565863|emb|CAE36410.1| molybdenum cofactor biosynthesis protein [Bordetella parapertussis]
Length = 365
Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE+ S +LS ++ A + ++ TGG+PL
Sbjct: 44 VTDRCNFRCTYCMPREVFDSSYAFMPHSALLSFEEIARLAAQFAR-LGVEKIRLTGGEPL 102
Query: 156 ILSH-KRLQKVLKTLR 170
+ + + L +L LR
Sbjct: 103 LRKNIETLVGMLAELR 118
>gi|116626369|ref|YP_828525.1| radical SAM domain-containing protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116229531|gb|ABJ88240.1| Radical SAM domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 355
Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 28/187 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + C + C C R + + L+++ L I+ + ++FTGGD
Sbjct: 7 PMLVIWEATQACDLACVHC-RASAQSERSASELTTEQGYRLLDEIRSFGEPL-MVFTGGD 64
Query: 154 PLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
PL ++ +K + + V + E I KEAG
Sbjct: 65 PLKRPDLFDLIRYSVK----------IGLRTNVTPSATPLLTNEAIDKFKEAGVSRMAIS 114
Query: 212 HANHPYEFSEEAI-------AAISRLANA---GIILLSQSVL----LKGINDDPEILANL 257
H + ++ A+ L +A G+ Q+ + + + + EI+ +
Sbjct: 115 VDGHDAQSHDDFRGIPGTFDRAMEALRHARDIGLDTQFQTTVTRRNMDHLPEIAEIVKEM 174
Query: 258 MRTFVEL 264
L
Sbjct: 175 RSKMWSL 181
>gi|331091338|ref|ZP_08340178.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404499|gb|EGG84043.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
2_1_46FAA]
Length = 449
Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 26/135 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C +C +C + + S++ E +A +++ + EV+ TG
Sbjct: 162 HTRAYLKVQDGCNQFCTYC-----IIPYARGRVRSREKENVVAEVKQLVANGYQEVVLTG 216
Query: 152 GDPLILSH-------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--- 201
+ LS + L ++ + I+ ++ +R S ++P+ I E + +
Sbjct: 217 ---IHLSSYGVDLQGEDLLSLILAVNEIEGLKRIRLGS----LEPRIITEEFAKTISGLE 269
Query: 202 --EAGKPVYIAIHAN 214
+ + N
Sbjct: 270 KICPHFHLSLQSGCN 284
>gi|195326684|ref|XP_002030055.1| GM25246 [Drosophila sechellia]
gi|194118998|gb|EDW41041.1| GM25246 [Drosophila sechellia]
Length = 385
Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYI 138
+SPL R+ + + L C + C +C + V K +L++++ I
Sbjct: 55 QRKNSPLTDSFGRHHTYLRISLTERCNLRCDYCMPADGVPLQPKNKLLTTEEILRLAR-I 113
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + ++ TGG+P + + +++ ++ + ++ + +
Sbjct: 114 FVEQGVRKIRLTGGEPTVRRD--IVEIVAQMKALPELEQVGITTNG 157
>gi|269469075|gb|EEZ80630.1| pyruvate-formate lyase-activating enzyme [uncultured SUP05 cluster
bacterium]
Length = 207
Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 93 YPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YPD + + CP CR+C +++ + K T D E + +I+ + + + V+F+
Sbjct: 18 YPDNLSCVVFTQGCPWRCRYCHNHDLIPTSKQTQF---DWEQIVEFIKTRVGLLDAVVFS 74
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQ 176
GG+P LQK L L IK V+
Sbjct: 75 GGEP------CLQKGL--LGAIKRVK 92
>gi|242774196|ref|XP_002478392.1| molybdopterin cofactor biosynthetic protein [Talaromyces stipitatus
ATCC 10500]
gi|218722011|gb|EED21429.1| molybdopterin cofactor biosynthetic protein [Talaromyces stipitatus
ATCC 10500]
Length = 687
Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 77/233 (33%), Gaps = 35/233 (15%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQE---KSQIWE 146
HR D + + + C + C +C E V S +L++ + Y+ + +
Sbjct: 85 HRQHDYLRISVTEKCNLRCLYCMPEEGVPLSPPAHLLTTPEIV----YLSSLFVSQGVTK 140
Query: 147 VIFTGGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDP---------------- 189
+ TGG+P + + + + LR ++ L + +
Sbjct: 141 IRLTGGEPTVRKDIVPMMQSIGDLRK-DGLRELCLTTNGISLHRKLDAMTEAGLTGVNLS 199
Query: 190 -QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
++P Q + + N E + NAGI L V+++G+N
Sbjct: 200 LDTLDPFKYQIMTRRNGFEAVMKSINRIEEMNCS--------FNAGIKLKINCVVMRGLN 251
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
+ + M ++ ++ D ++ + +E I+ +
Sbjct: 252 EHEIVPFVEMGREKDIEVRFIEYMPFDGNKWSAKKMVPYQEMLDIIRKSYPSL 304
>gi|20094976|ref|NP_614823.1| molybdenum cofactor biosynthesis protein [Methanopyrus kandleri
AV19]
gi|24211984|sp|Q8TV60|MOAA_METKA RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|19888230|gb|AAM02753.1| Molybdenum cofactor biosynthesis enzyme [Methanopyrus kandleri
AV19]
Length = 307
Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + + C + C +C R + LS+ + L E + +V TGG+PL+
Sbjct: 12 VRISVTMRCNMACVYCHREGE--RPGRSELSAAEWGRLLRACAE-IGVRKVKITGGEPLL 68
Query: 157 LSHKRLQKVLKTLRYIKHVQIL 178
L ++++ + V ++
Sbjct: 69 RRD--LIEIIENAEGFEEVSLV 88
>gi|298529710|ref|ZP_07017113.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511146|gb|EFI35049.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 355
Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 64/211 (30%), Gaps = 35/211 (16%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
++C CRFC + G + V+S A+ + I E+ GG +
Sbjct: 61 TNICSNACRFCAYSKRAGEEGAYVMSVDQIRVAVKS-RMHEPIDEIHVVGG---LNPDLP 116
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
L+ L+ IK + H + L ++ + V +E
Sbjct: 117 YDYYLEMLKSIKEI-RPEVHIKAFTAVEIAY---LAGQYEKTREQV-----------LTE 161
Query: 222 EAIAAISRLANAGIILLSQSVLLKGI------NDDPEILANLMRTF-VELRIKPYYLHHP 274
A + L G + S L + + ++ + L + + + H
Sbjct: 162 FVQAGLDALPGGGAEVFS-PQLRRHLCPEKLSGEEWLKVHELAHSLNIPTNCTLLFGHVE 220
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
H + + L+++ SG
Sbjct: 221 SWVDRLDH--------LQALRDLQDRSSGFL 243
>gi|320161621|ref|YP_004174846.1| hypothetical protein ANT_22200 [Anaerolinea thermophila UNI-1]
gi|319995475|dbj|BAJ64246.1| hypothetical protein ANT_22200 [Anaerolinea thermophila UNI-1]
Length = 798
Score = 37.6 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 66/200 (33%), Gaps = 23/200 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGGDPLI 156
++ CP C++CF QK ++ + E +++ E+ E+ F GG+PL
Sbjct: 8 MIVPSSGCPASCQYCFGPH----QKDKTMNKQVLERTASWLGEEKASTLEITFHGGEPLT 63
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
K + L+ + +RF+ + + +N LI E V + + P
Sbjct: 64 AGVKFFRNAFDVLQNQNPEKNIRFNLQSNLWL---LNDALIDLFAEHR--VSMGTSLDGP 118
Query: 217 YEFSEEAIAA---------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
++ I + G+ + ++ E ++ F+ +
Sbjct: 119 EHINDAQRGKGYFRRTMLGIEKARRKGLAVGC---IVTFTRQSAEQWEEILEFFIREGLN 175
Query: 268 PYYLHHPDLAAGTSHFRLTI 287
+H +
Sbjct: 176 I-SIHPAQPMLNGAGHVTPE 194
>gi|210621259|ref|ZP_03292565.1| hypothetical protein CLOHIR_00508 [Clostridium hiranonis DSM 13275]
gi|210154870|gb|EEA85876.1| hypothetical protein CLOHIR_00508 [Clostridium hiranonis DSM 13275]
Length = 479
Score = 37.6 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L E + + + S K I + Y +RI++ + C C +C
Sbjct: 56 THREAALLLECDQQDLNEKMFSLAKEIKQKIYGNRIVMFAPLYLSNYCVNGCVYCPYHLK 115
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
L+ ++ + + +Q+ + TG DP+ + + + +KT+ IKH
Sbjct: 116 NKHIARKKLTQEEIKKEVIALQDMGHKRLALETGEDPVNNPIEYVLESIKTIYGIKHKNG 175
Query: 175 -VQILRFHSRVPIVDPQR 191
++ + + V+ R
Sbjct: 176 DIRRVNVNIAATTVENYR 193
>gi|167630019|ref|YP_001680518.1| hypothetical protein HM1_1949 [Heliobacterium modesticaldum Ice1]
gi|167592759|gb|ABZ84507.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 389
Score = 37.6 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 62/193 (32%), Gaps = 19/193 (9%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
++C CRFC G +G VLS EA I+E + +++ GG I
Sbjct: 96 TNICVTGCRFCAFYRPPGHPEGYVLSR---EAIFQKIEETVAVGGTQILMQGG---IHPD 149
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L + LR +K +R PI PE++ ++ G + I H
Sbjct: 150 LGLAWFEELLRAVK--------ARFPIHIHSFSPPEIVFLAEKEGLSLEAVIGRLHAAGL 201
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
L + ++ S G +++ R + Y
Sbjct: 202 DSIPGGGAEILDDRVRQVI--SPRKIGWRRWMDVMQTAHRLGLRTTATMMYGSVESPEER 259
Query: 280 TSHFRLTIEEGQK 292
H + + E Q
Sbjct: 260 VRHM-IRVREAQD 271
>gi|170686175|ref|ZP_02877397.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0465]
gi|170669872|gb|EDT20613.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0465]
Length = 377
Score = 37.6 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 23/204 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E ++FTGGD
Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHSLELTFEEGKKLIDDIYEMENPM-LVFTGGD 66
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----GKPVY 208
PL+ + K V++ S P V + I L G
Sbjct: 67 PLMRPDV---YDIAEYAVKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGPTAE 123
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
I H + + AI L I + +V+ D E +A L+
Sbjct: 124 IHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEEL------- 176
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQK 292
+ + F + I G++
Sbjct: 177 ------ECVLWSIFFLVPIGRGKE 194
>gi|320353874|ref|YP_004195213.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
DSM 2032]
gi|320122376|gb|ADW17922.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
Length = 295
Score = 37.6 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 80/234 (34%), Gaps = 27/234 (11%)
Query: 97 ILLKLLHVCPVY-CRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
++L++ C C FC R+ K D A A+ + ++ + GD
Sbjct: 23 LILQVTTGCSHNRCTFCGAYRDKPFQSKSWEQIEADLAFAAAWCRRQTTL---FLADGDV 79
Query: 155 LILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L L H+RL +L+ +R + ++ + ++ ++ + +L + +Y+ + +
Sbjct: 80 LALPHERLVALLERIREQLPWIRRVSCYASCQ-NIEEKTDQQLAHYKRLGLGRLYLGLES 138
Query: 214 NH-------PYEFSEEAIAAI-SRLANAG----IILLSQSVLLKGINDDPEILANLMRTF 261
H EA+ R+ G + L + A+++
Sbjct: 139 GHDPTLAAIAKGVDSEAMVTAGRRIRATGLFLSVTCLLGIAGVTQSQAHARATASVLNRM 198
Query: 262 VELRIKPYYLHHPDLAA-----GTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
+I L F + +E ++ L+ ++GL P
Sbjct: 199 QPHQIAVLTLMLLPNTPLYRQMRAGRFAMPDQE--QLFRELRTLLAGLG-PHRA 249
>gi|303327095|ref|ZP_07357537.1| putative radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302863083|gb|EFL86015.1| putative radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 336
Score = 37.6 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 49/156 (31%), Gaps = 18/156 (11%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS-----KDTEAALAYIQEKS 142
I +YP +I L++ + C + C C + + + + I
Sbjct: 2 NITVKYPHQIALEVANTCNLTCPICPCFHGPAPMDRKMRKPQTMTFELFASLVEQIASWP 61
Query: 143 QIWEVIFTG--GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+ IF G+PL+ K L K L L + V + + ++D + L L
Sbjct: 62 TWPDNIFLNMFGEPLM--DKGLAKKLALLETLGLVGRVHLQTNASLLDKDIADMLLEHKL 119
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
+ + I R GI+
Sbjct: 120 GRL---------IPCMDSLNPKTFETIRRGTQFGIV 146
>gi|219852013|ref|YP_002466445.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
gi|219546272|gb|ACL16722.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
Length = 377
Score = 37.6 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ P + + +C CR+C + + + + + + + + I + F+G
Sbjct: 23 KRPTYAYISITSLCNSRCRYCDSWK---NNGESEPDTDEWKKIIDEL-VNLGIVTLTFSG 78
Query: 152 GDPLILSH 159
G+P I
Sbjct: 79 GEPFIRKD 86
>gi|212637661|ref|YP_002314186.1| molybdenum cofactor biosynthesis protein A [Shewanella
piezotolerans WP3]
gi|212559145|gb|ACJ31599.1| Radical SAM:Molybdenum cofactor synthesis C [Shewanella
piezotolerans WP3]
Length = 328
Score = 37.6 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWEVIFTGGDPLIL 157
+ C C +C + K VLS ++ A + + ++ TGG+PL+
Sbjct: 19 VTDRCDFRCVYCMSEDPCFLSKEHVLSLEELAWVGQAFTELG----VKKIRLTGGEPLVR 74
Query: 158 SH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
+ +L K+L L ++ + + SR+ + + L
Sbjct: 75 TDCDQLVKLLGKLPGLEELSMTTNGSRLTRFAHEMHDSGL 114
>gi|161760543|ref|NP_908108.2| molybdenum cofactor biosynthesis protein A [Wolinella succinogenes
DSM 1740]
Length = 321
Score = 37.6 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 29/171 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D I + + + C C++C + + + + ++ TGG+
Sbjct: 11 DYIRISVTNRCNFRCQYCMPDTPEDFFDAEEDIPLAQLLELVK-VAIDEGVKKIRITGGE 69
Query: 154 PLILSHKRLQKVLKTLR----YIKHVQILRFHSRVPIVDP----------QRINPELIQC 199
P+I L + + I + + + +RIN L
Sbjct: 70 PMIRKD--LDWFIAQIYLYNPEID----IALTTNGFYLRHFAKSLKEAGLKRINVSL-DS 122
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
LK + V + N + + I + G+I+ V LKG+N+D
Sbjct: 123 LK--PERVALISKKN----VLPQILEGIDLALSVGLIVKLNMVPLKGVNED 167
>gi|160893994|ref|ZP_02074773.1| hypothetical protein CLOL250_01549 [Clostridium sp. L2-50]
gi|156864372|gb|EDO57803.1| hypothetical protein CLOL250_01549 [Clostridium sp. L2-50]
Length = 489
Score = 37.6 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 8/124 (6%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLS 127
E D I + + Y +RI+L + C C +C L+
Sbjct: 75 CEMPDKIREMYDLAREIKEDYYGNRIVLFAPLYLSNYCVNGCVYCPYHSKNKHIARKKLT 134
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSR 183
+D + +Q+ I G DP+ + + + + T+ IKH ++ + +
Sbjct: 135 QEDIVREVTALQDMGHKRLAIEAGEDPVNNPIEYILECINTIYSIKHKNGAIRRVNVNIA 194
Query: 184 VPIV 187
V
Sbjct: 195 ATTV 198
>gi|260587677|ref|ZP_05853590.1| tRNA-I(6)A37 modification enzyme MiaB [Blautia hansenii DSM 20583]
gi|260541942|gb|EEX22511.1| tRNA-I(6)A37 modification enzyme MiaB [Blautia hansenii DSM 20583]
Length = 312
Score = 37.6 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 53/127 (41%), Gaps = 22/127 (17%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ +YP + + ++ C +C +C + G + + KD + + + + EV+
Sbjct: 196 VERKYPFKSGVNIMFGCNNFCSYCIVPYVRG--RERSRNPKDIVREIERLVKDGVV-EVM 252
Query: 149 FTGG----------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
G +P+ ++L + I+ ++ +RF P+ ++ ELI+
Sbjct: 253 LLGQNVNSYGKNLDEPMT-----FAQLLTEIEKIEGLKRIRF----MTSHPKDLSDELIE 303
Query: 199 CLKEAGK 205
+K + K
Sbjct: 304 VMKNSKK 310
>gi|225568730|ref|ZP_03777755.1| hypothetical protein CLOHYLEM_04809 [Clostridium hylemonae DSM
15053]
gi|225162229|gb|EEG74848.1| hypothetical protein CLOHYLEM_04809 [Clostridium hylemonae DSM
15053]
Length = 427
Score = 37.2 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 23/128 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ E+ LA ++ + EV+ TG
Sbjct: 141 HTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRKRESVLAEVRRLAEGGYKEVVLTG 195
Query: 152 GDPLILSH------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ LS L ++++ + ++ +R S ++P+ + E Q L K
Sbjct: 196 ---IHLSSYGVDTGDDLLRLIEAVHGTDGIERIRLGS----LEPRIVTEEFAQALAGLPK 248
Query: 206 PVYIAIHA 213
I H
Sbjct: 249 ---ICPHF 253
>gi|33600311|ref|NP_887871.1| molybdenum cofactor biosynthesis protein A [Bordetella
bronchiseptica RB50]
gi|33567910|emb|CAE31823.1| molybdenum cofactor biosynthesis protein [Bordetella bronchiseptica
RB50]
Length = 365
Score = 37.2 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C C +C RE+ S +LS ++ A + ++ TGG+PL
Sbjct: 44 VTDRCNFRCTYCMPREVFDSSYAFMPHSALLSFEEIARLAAQFAR-LGVEKIRLTGGEPL 102
Query: 156 ILSH-KRLQKVLKTLR 170
+ + + L +L LR
Sbjct: 103 LRKNIETLVGMLAELR 118
>gi|322807365|emb|CBZ04939.1| transcriptional regulatory protein [Clostridium botulinum H04402
065]
Length = 455
Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLIL 157
+ H C + C++CF E K ++S + A+ ++ EKS EV GG+PL +
Sbjct: 101 IAHDCNLRCKYCFADEGEYKGKRELMSPGVGKKAIDFVIEKSGPRKNIEVDLFGGEPL-M 159
Query: 158 SHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ ++K+++ + + H + +RF + +N E+++ L + + + +
Sbjct: 160 AFSTIKKIVEYAKEQEKKHNKTIRFT---MTTNGTLLNQEIMEYLDKNMGNIVL--SIDG 214
Query: 216 PYEFSEEAIAAIS 228
E ++ +
Sbjct: 215 RKEINDNVRVRVD 227
>gi|296387013|ref|ZP_06876512.1| heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa PAb1]
Length = 111
Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ ++ +P + R P ++ LL C + C+ C+ S L + + +
Sbjct: 11 LAEDAPTPRRAGGRRAP-VVIWNLLRRCNLTCKHCY-STSTDSDFRGELETAEILRGIDD 68
Query: 138 IQEKSQIWEVIFTGGDPLILSH 159
++ + + +I +GG+PL+
Sbjct: 69 LRA-AGVRVLILSGGEPLMHPD 89
>gi|15895113|ref|NP_348462.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824]
gi|81530267|sp|Q97I18|MIAB_CLOAB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|15024813|gb|AAK79802.1|AE007692_10 Predicted Fe-S oxidoreductase, YMCB B.subtilis ortholog
[Clostridium acetobutylicum ATCC 824]
gi|325509252|gb|ADZ20888.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018]
Length = 441
Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 20/157 (12%)
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRRE 116
Q PQ + I D ++G I Y + + +++ C +C +C
Sbjct: 112 QMFPQYLKKVENERTSVVEIWDKEEGIVEGMPIYRSYDMKAFVTIMYGCNNFCTYCIVPY 171
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG------GDPLI--LSHKRLQKVLKT 168
+ G ++ +D E + + +K E+ G G L ++ L L+
Sbjct: 172 VRGRERSRKP--EDIENEIKELVKKGY-KEITLLGQNVNSYGKSLDEEMNFALL---LRR 225
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L I+ + +RF P+ + ++I + + K
Sbjct: 226 LNNIEGLLRIRF----MTSHPKDLTDDVIAAIADCDK 258
>gi|257464663|ref|ZP_05629034.1| molybdenum cofactor biosynthesis protein A [Actinobacillus minor
202]
gi|257450323|gb|EEV24366.1| molybdenum cofactor biosynthesis protein A [Actinobacillus minor
202]
Length = 338
Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 77/261 (29%), Gaps = 19/261 (7%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALA 136
IG+++ S + +Y L VC C +C S + +
Sbjct: 8 IGNDSTSLIDRFQRQYTYLRLSI-TDVCNFRCNYCLPEGYRPPSHKQTFLSVDEIQRVAQ 66
Query: 137 YIQEKSQIWEVIFTGGDPLILSHK-RLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQR 191
++ TGG+P + + + I+ + + R V +
Sbjct: 67 AF-ANLGTEKIRITGGEPTLRKDFLEIAHRISQTAGIRQIALTTNGYRMERDVELWQQAG 125
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
I + + ++ N + I R G + +VL+K
Sbjct: 126 ITHLNVSVDSLDPRQFHLITGENKL----ATVLNGIDRAFEIGYKKVKVNAVLMKQYTAK 181
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
L + +R + I+ ++ + F+ GQ I+ L QP
Sbjct: 182 G--LDDFLRWIKDRPIQMRFIELMETGEMDHFFQQQHLSGQSILERL-THEGWQLQPK-- 236
Query: 311 LDLPGGYGKVKIDTHNIKKVG 331
+ G KV ++G
Sbjct: 237 -AMSDGPAKVLAHPDYQGEIG 256
>gi|255100845|ref|ZP_05329822.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
QCD-63q42]
Length = 319
Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
++ +Y +I L C + C +C + + LS +D + + + E
Sbjct: 1 MIDKYGRKIDYLRISLTDKCNLRCVYCMPPDVKFDKNYINENLSFEDYKFIIKAMAE-QG 59
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
I ++ FTGG+PL+ +L +++K + + + + I RI
Sbjct: 60 ITKIRFTGGEPLLYP--KLNELIKFTKEECGINNIGMTTNA-IGLSDRI 105
>gi|150402967|ref|YP_001330261.1| radical SAM domain-containing protein [Methanococcus maripaludis
C7]
gi|150033997|gb|ABR66110.1| Radical SAM domain protein [Methanococcus maripaludis C7]
Length = 369
Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 14/136 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW----EVIFTGGDP 154
+++ CP CRFC ++ G + + E+ + ++ I G
Sbjct: 138 IEITRGCPYNCRFCQTPQIFGKN----IRHRSIESIVKIVKTMGDIRFVTPNAFSYGSKT 193
Query: 155 LILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
++L+K++K+L IK + L F + V P+ + E + + + YI
Sbjct: 194 GTKPDIEKLEKLMKSLFEIK--KRLFFGTFPSEVRPEFVTFETLDLVNKYCDNRYIHFG- 250
Query: 214 NHPYEFSEEAIAAISR 229
S+E + I R
Sbjct: 251 --AQSGSDEVLKNIRR 264
>gi|126699320|ref|YP_001088217.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
630]
gi|254975350|ref|ZP_05271822.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
QCD-66c26]
gi|255092740|ref|ZP_05322218.1| molybdenum cofactor biosynthesis protein [Clostridium difficile CIP
107932]
gi|255306734|ref|ZP_05350905.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
ATCC 43255]
gi|255314479|ref|ZP_05356062.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
QCD-76w55]
gi|255517156|ref|ZP_05384832.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
QCD-97b34]
gi|255650260|ref|ZP_05397162.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
QCD-37x79]
gi|260683379|ref|YP_003214664.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
CD196]
gi|260686974|ref|YP_003218107.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
R20291]
gi|306520235|ref|ZP_07406582.1| molybdenum cofactor biosynthesis protein A [Clostridium difficile
QCD-32g58]
gi|115250757|emb|CAJ68581.1| Molybdenum cofactor biosynthesis protein MoaA [Clostridium
difficile]
gi|260209542|emb|CBA63138.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
CD196]
gi|260212990|emb|CBE04301.1| molybdenum cofactor biosynthesis protein [Clostridium difficile
R20291]
Length = 319
Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
++ +Y +I L C + C +C + + LS +D + + + E
Sbjct: 1 MIDKYGRKIDYLRISLTDKCNLRCVYCMPPDVKFDKNYINENLSFEDYKFIIKAMAE-QG 59
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
I ++ FTGG+PL+ +L +++K + + + + I RI
Sbjct: 60 ITKIRFTGGEPLLYP--KLNELIKFTKEECGINNIGMTTNA-IGLSDRI 105
>gi|77360351|ref|YP_339926.1| cytoplasmic asparaginase I [Pseudoalteromonas haloplanktis TAC125]
gi|76875262|emb|CAI86483.1| L-asparaginase I(L-asparagine amidohydrolase I) (L-ASNase I)
[Pseudoalteromonas haloplanktis TAC125]
Length = 336
Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 46/119 (38%), Gaps = 12/119 (10%)
Query: 192 INPELIQCLKEAGKPVYIAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
I+ E+++ L + + N P E + + + + G+I+++ + +KG
Sbjct: 221 ISTEVVKSLVNGSIKALVLLSFGVGNAPQ--DPEFLTILEQASKRGVIIINLTQCIKGHV 278
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT----IEEGQKIVAS-LKEKIS 302
+ + + + Y + H+ L+ +E + ++ L+ +++
Sbjct: 279 NMGGYATG--NALLNIGVISGYDMTLEACLTKLHYLLSQNLEVETIRHLMQDNLRGELT 335
>gi|254251467|ref|ZP_04944785.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158]
gi|124894076|gb|EAY67956.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158]
Length = 457
Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 90/291 (30%), Gaps = 57/291 (19%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 148 TAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQGVREVTLLGQN 202
Query: 154 ------PLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L + ++ + I ++ +R+ + P+ LI +
Sbjct: 203 VNAYRGALTAGSSEIADFATLIEYVADIPGIERIRYTTS----HPKEFTQRLIDTYAKVP 258
Query: 205 KPVYIAIHANHPYEFSE--------------EAIAAISRLANAGIILLSQSVLLKGI--- 247
K + H + P + E + I +L L + L+ G
Sbjct: 259 K---LVNHLHLPVQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDLIVGFPGE 315
Query: 248 -NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF------RLTIEEGQKIVASLKEK 300
+DD + + L+ +++ P ++ + ++ Q + A+++E
Sbjct: 316 TDDDFDKMMALVHDM-RYDTSFSFIYSPRPGTPAANLHDDTPRDVKLKRLQHLQATIEEN 374
Query: 301 ISGLCQPFYILDLPGGYGKVK-IDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
++ + GKV+ I + +N V ++P
Sbjct: 375 VA-----RISRSM---VGKVERILVEGPSRKDPNELAGRTENNRVVNFPAP 417
>gi|262384855|ref|ZP_06077987.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 2_1_33B]
gi|262293571|gb|EEY81507.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 2_1_33B]
Length = 444
Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + ++S E A E++ TG
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQARE--VASKGGKEIVLTGVN 205
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + +++ L ++ + R S ++P I E I + + + A
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVEGIVRYRISS----IEPNLITDEAIDFVAHSKR---FA 258
Query: 211 IHANHPYEFSEEAIAAISR 229
H + P + +A+ + R
Sbjct: 259 PHFHIPLQSGSDAVLQLMR 277
>gi|269797405|ref|YP_003311305.1| radical SAM protein [Veillonella parvula DSM 2008]
gi|269094034|gb|ACZ24025.1| Radical SAM domain protein [Veillonella parvula DSM 2008]
Length = 276
Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 79/280 (28%), Gaps = 47/280 (16%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+E+ + P + + S G +H L + C + C +C R ++
Sbjct: 1 MKEIQGQSFLQNHPCYNKDASANWGRLH-------LPVAPNCNIQCNYCNRMYDCANENR 53
Query: 124 TVLSSKDT--EAALAYIQ----EKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHV- 175
++ + A A+++ + I V G GDP+ + K L+ HV
Sbjct: 54 PGVTQHVYTPQEAAAFVRKVFEARQDISVVGIAGPGDPMCDADKTLETFRLVKNDFPHVM 113
Query: 176 ---------------QILRFHSRVPIVDPQRINPEL---IQCLKEAGKPVYIAIHANHPY 217
I + I+PE+ + + +Y +
Sbjct: 114 LCLSSNGLAVPDYVNDIADLGITHVTITANAIDPEIAKNVYSMVRYEGNIYK--GIDGAR 171
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
E +I +L II+ +V++ +N D +
Sbjct: 172 ILLERQAESIRKLKEKNIIVKINTVVVPDVNMDHVPAIAKQAE--AWGVDLMNCIAMIPV 229
Query: 278 AGT--SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
T + R E + Y+ +
Sbjct: 230 HDTVFENHRGPTSEEIDNMRQFIGH--------YVPQMTH 261
>gi|170291214|ref|YP_001738030.1| radical SAM domain-containing protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170175294|gb|ACB08347.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 334
Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 53/130 (40%), Gaps = 13/130 (10%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--- 140
S G++ R + I ++ CP+ C FC S+ D +++ +
Sbjct: 16 SVAFGLIDRGTNLIQVRPSSSCPLSCIFCSTDAGPKSRTRRTEFLVDLNYIISWFERLVE 75
Query: 141 KSQIWEV---IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
I ++ I T GDP + ++ ++K LR I V+++ + P++ +LI
Sbjct: 76 SKGISDIEAHIDTVGDPFLYP--KIVDLVKRLRDIPEVKVISAQTHGPLL-----TQKLI 128
Query: 198 QCLKEAGKPV 207
L+ +
Sbjct: 129 GELEGRIDRI 138
>gi|134045442|ref|YP_001096928.1| radical SAM domain-containing protein [Methanococcus maripaludis
C5]
gi|132663067|gb|ABO34713.1| Radical SAM domain protein [Methanococcus maripaludis C5]
Length = 371
Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 94/240 (39%), Gaps = 27/240 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGG 152
++++L + +C C +C E + + K ++ I+E V TGG
Sbjct: 22 EKLVLYITGLCEESCYYCPLSEKRKKKDVIFANEKQIDSIEEAIEEAYLCGSKGVGITGG 81
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--------AG 204
+PL+ R+++ ++ L+ +K FH+ + P+ +N E ++ LKE
Sbjct: 82 NPLL----RIERTVEYLKALKEEFGKNFHAHLYTT-PKFVNEENLRLLKEADLDEIRLHS 136
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
++ EF E+ + + G+ + GI + + + +L ++
Sbjct: 137 TKLFNDFENFDKMEFLEKLKLCKKYVKDVGVEIP-------GIPNFEKEILDLAFEIDKI 189
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG-LCQPFYILDLPGGYGKVKID 323
+K ++ + + ++ I+ G +ISG Y+ D GK+ I
Sbjct: 190 GVKFLNINELEYSETN--YQALIDRGFSEKDDTTSRISGSFETAKYVRD--NFKGKMIIH 245
>gi|256398061|ref|YP_003119625.1| radical SAM domain-containing protein [Catenulispora acidiphila DSM
44928]
gi|256364287|gb|ACU77784.1| Radical SAM domain protein [Catenulispora acidiphila DSM 44928]
Length = 370
Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 76/280 (27%), Gaps = 61/280 (21%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIFTGGD 153
+ L C + CR C VG+ + ++ E A+ Y + +V GG+
Sbjct: 24 LFLYPTTACQLRCRHC----YVGNDRLNAANTMSLELAIQIMDYFKITGGHDKVYLLGGE 79
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P + +L +++ R +V I + L + P +
Sbjct: 80 PTMHP--QLPEMVTAARERD--------YQVTISSNGDFDEALFGRM-----PPELLNSF 124
Query: 214 NHPYE-FSEEAIAAIS-----------RLANA---GIILLSQSVLLKGINDDPEILANLM 258
N E I R+ A G + Q+ + + + E + +L+
Sbjct: 125 NFSLESADPAVHRRIRGNPHNFDQVTARIRTAAELGYQIRIQTTVSR---ANREGILDLI 181
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYILDLPGG 316
+L + H F + + A ++ +P + P
Sbjct: 182 PFLADLGVSTLSFHTLGRTGNGGRFLEPLAPAEWMEFCAEIEAYPP---EPRLAVYYP-- 236
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHN-------IVHDYPP 349
+ + H YP
Sbjct: 237 -------PTFVTADAQELLADRGYPGCPARTLDRPHVYPD 269
>gi|228947471|ref|ZP_04109761.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228811991|gb|EEM58322.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 373
Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 68/206 (33%), Gaps = 23/206 (11%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ P ++ +L C + C C R E + L+ ++ + + I E ++FTG
Sbjct: 8 KNPFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMDNPM-LVFTG 65
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----GKP 206
GDPL+ + K V++ S P V + I L G
Sbjct: 66 GDPLMRPDV---YDIAEYAVKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGPT 122
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
I H + + AI L I + +V+ + E +A L+
Sbjct: 123 AEIHDHFRGTEGSFKLTMNAIRYLHELKIPIQINTVVSNYNVNVLEDMAILVEEL----- 177
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQK 292
D + F + G++
Sbjct: 178 --------DCVLWSVFFLVPTGRGKE 195
>gi|319650009|ref|ZP_08004158.1| coenzyme PQQ synthesis protein PqqE [Bacillus sp. 2_A_57_CT2]
gi|317398190|gb|EFV78879.1| coenzyme PQQ synthesis protein PqqE [Bacillus sp. 2_A_57_CT2]
Length = 375
Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 63/177 (35%), Gaps = 14/177 (7%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ P ++ +L C + C C R E + LS + + + I+E + ++FTG
Sbjct: 9 KDPFIVIWELTRACQLKCLHC-RAEAQYRRDPRELSFDEGKYLIDQIKEMNNPM-LVFTG 66
Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----G 204
GDPL+ + +K V++ S P V + I L G
Sbjct: 67 GDPLMRQDVFDIAEYAVKK-----GVRVSMTPSATPNVTKEAIEKAKEVGLARWAFSLDG 121
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H + I I L I + +V+ + D E +A ++
Sbjct: 122 PKAEIHDHFRGTAGSFDLTIERIKYLHELEIPVQINTVISRYNIDYLEEMAKVVEEL 178
>gi|169350535|ref|ZP_02867473.1| hypothetical protein CLOSPI_01303 [Clostridium spiroforme DSM 1552]
gi|169292855|gb|EDS74988.1| hypothetical protein CLOSPI_01303 [Clostridium spiroforme DSM 1552]
Length = 475
Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L L + C C +C + L+ ++ + + +Q+ + TG DP+
Sbjct: 92 LYLSNYCVNGCVYCSYHQKNKHIARKKLTQEEIKKEVIALQDMGHKRLALETGEDPINNP 151
Query: 159 HKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR 191
+ + + +KT+ IKH ++ + + V+ R
Sbjct: 152 IEYVLESIKTIYSIKHKNGAIRRVNVNIAATTVENYR 188
>gi|258405334|ref|YP_003198076.1| Radical SAM domain-containing protein [Desulfohalobium retbaense
DSM 5692]
gi|257797561|gb|ACV68498.1| Radical SAM domain protein [Desulfohalobium retbaense DSM 5692]
Length = 529
Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C ++CR C+ R G T + ++ + + ++ FTGG+PL+
Sbjct: 206 WHVTQACDLHCRHCYDRSQRGHMPWTD-AIAVLDSLDHFCRTHHVQGQITFTGGNPLLHP 264
>gi|34484012|emb|CAE11008.1| MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A [Wolinella succinogenes]
Length = 363
Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 29/171 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D I + + + C C++C + + + + ++ TGG+
Sbjct: 53 DYIRISVTNRCNFRCQYCMPDTPEDFFDAEEDIPLAQLLELVK-VAIDEGVKKIRITGGE 111
Query: 154 PLILSHKRLQKVLKTLR----YIKHVQILRFHSRVPIVDP----------QRINPELIQC 199
P+I L + + I + + + +RIN L
Sbjct: 112 PMIRKD--LDWFIAQIYLYNPEID----IALTTNGFYLRHFAKSLKEAGLKRINVSL-DS 164
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
LK + V + N + + I + G+I+ V LKG+N+D
Sbjct: 165 LK--PERVALISKKN----VLPQILEGIDLALSVGLIVKLNMVPLKGVNED 209
>gi|288572914|ref|ZP_06391271.1| MiaB-like tRNA modifying enzyme [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288568655|gb|EFC90212.1| MiaB-like tRNA modifying enzyme [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 432
Score = 37.2 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R LK+ C +C +C + G L D E + + E E++ TG
Sbjct: 144 TRAFLKVQDGCDHFCSYCIIPFLRGKPVSRPL--DDLEREVRSVVESGCP-EIVLTGVHL 200
Query: 155 LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ + L +L+ + I V+ +RF S ++P + +L+ + E
Sbjct: 201 GLYGREGGPGLADLLRAVGAIDGVKRIRFGS----LEPFSVGDDLLDAMAE 247
>gi|293609283|ref|ZP_06691585.1| molybdopterin biosynthesis protein [Acinetobacter sp. SH024]
gi|292827735|gb|EFF86098.1| molybdopterin biosynthesis protein [Acinetobacter sp. SH024]
Length = 346
Score = 37.2 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 64/179 (35%), Gaps = 23/179 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R ++ + + C C +C K +LS + +++ + I + TG
Sbjct: 22 RIKRKLRISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALIQFCSFMVQ-QGIESIRITG 80
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFH--------SRVPIVDPQRINPELIQCLKEA 203
G+PL+ + + ++ L+ +K + + R ++ +L L ++
Sbjct: 81 GEPLMR--QGIVHFVRDLQALKALGLKRISMTTNGHYLAKYAQQLKDAGLDDLNISL-DS 137
Query: 204 GKPVYIAIHANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
P+ E + E + I +AG+ VL+K NDD +
Sbjct: 138 LDPIQF-------KELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDDQILPMVKW 189
>gi|186475181|ref|YP_001856651.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
phymatum STM815]
gi|229890465|sp|B2JD88|MIAB_BURP8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|184191640|gb|ACC69605.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phymatum
STM815]
Length = 456
Score = 37.2 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 23/133 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203
Query: 154 -----PLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L + ++ + I ++ +R+ + P+ LI + K
Sbjct: 204 NAYRGAMTLGATEIADFATLIEYVADIPGIERIRYTTS----HPKEFTQRLIDTYAKVPK 259
Query: 206 PVYIAIHANHPYE 218
+ H + P +
Sbjct: 260 ---LVSHLHLPVQ 269
>gi|327311467|ref|YP_004338364.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus
uzoniensis 768-20]
gi|326947946|gb|AEA13052.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus
uzoniensis 768-20]
Length = 341
Score = 37.2 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 84/230 (36%), Gaps = 42/230 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ VC C FC + G +L++ D + + + + + TGG+PL+ S
Sbjct: 44 VNDVCNFSCIFCHFEGQLRG-VGRLLNADDYGFLVDVLSK-VGVRDYKLTGGEPLLRSDI 101
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-----RINPELIQCLKEAGKPVYIAIHANH 215
V I+R +R + R+ + V +++H
Sbjct: 102 --------------VDIVRKMNRDGVEISMTTNGFRLAELAEDLAAAGLRRVNVSVHTTD 147
Query: 216 PYEFSEEA---IAAISRLAN-------AGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P +FS+ A R+ + AG+ + +VLLKGINDD E L +L++ +
Sbjct: 148 PEKFSKVAGVPKEWFRRVLDGVHAAVKAGMKVKLNAVLLKGINDDRESLRSLVKLAASIG 207
Query: 266 IKPYYLHHPDLA----AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
L R + +E +++ + G +P Y
Sbjct: 208 ASIQ-LIELMPVGLGSRVFGDLRASADEVAELLEGM-----G-ARPAYTR 250
>gi|325279342|ref|YP_004251884.1| Radical SAM domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324311151|gb|ADY31704.1| Radical SAM domain protein [Odoribacter splanchnicus DSM 20712]
Length = 355
Score = 37.2 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF--TGG 152
+ + C + CR C S + +D AL I + V TGG
Sbjct: 30 HTLFWECTLRCNLACRHCGSDCKAIS-GQPDMPKEDFLKALDNITPQVDPHRVFIIFTGG 88
Query: 153 DPLILSHKRLQKV 165
+PL+ L++
Sbjct: 89 EPLMRKD--LEEC 99
>gi|292656271|ref|YP_003536168.1| coenzyme PQQ synthesis protein E-like protein [Haloferax volcanii
DS2]
gi|291370056|gb|ADE02283.1| coenzyme PQQ synthesis protein E homolog [Haloferax volcanii DS2]
Length = 396
Score = 37.2 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R P ++ ++ C + C C L++ + + L +E V+ +G
Sbjct: 42 RRPFVLIWEVTQACDLACDHCRADATPARHPDE-LTTAEGKRLLDQAREFGPGQLVVLSG 100
Query: 152 GDPLILSH 159
GDPL S
Sbjct: 101 GDPLARSD 108
>gi|297624979|ref|YP_003706413.1| molybdenum cofactor biosynthesis protein A [Truepera radiovictrix
DSM 17093]
gi|297166159|gb|ADI15870.1| molybdenum cofactor biosynthesis protein A [Truepera radiovictrix
DSM 17093]
Length = 336
Score = 37.2 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 78/213 (36%), Gaps = 22/213 (10%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C + + LS +D L + V FTGG+PL+ +
Sbjct: 30 VTPRCNFRCTYCDPLGLGHADPVGTLSVQDVAHVLE-AAVGLGMRSVRFTGGEPLLR--R 86
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--------IH 212
L +++ + + V+ + + + +R++ L L +
Sbjct: 87 ELPEMIACAKRLG-VEDVAITTNA-TLLERRLDALLAAGLDRVNISLDAVSPAVFRRATG 144
Query: 213 ANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIND-DPEILANLMRT--FVELRIKP 268
+P ++ L G+ + +V+++GIND + LA L R I+
Sbjct: 145 GGNPDPVW----RGVTLLLERGLHPVKLNAVVMRGINDGEIAKLAELSRERPLHVRFIEY 200
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
+L++ A S F + +++V +
Sbjct: 201 MHLNNAAPGAYRSAF-MPGAAVREVVERAFGPL 232
>gi|197303437|ref|ZP_03168476.1| hypothetical protein RUMLAC_02159 [Ruminococcus lactaris ATCC
29176]
gi|197297435|gb|EDY31996.1| hypothetical protein RUMLAC_02159 [Ruminococcus lactaris ATCC
29176]
Length = 221
Score = 37.2 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 8/107 (7%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ G R + + C + C +C + + LS D Y+
Sbjct: 5 EKFISINGEGRRAGELAVFIRFKGCNLNCSYCDTKWANEPACDYEELSPDDI---CEYVS 61
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
E I V TGG+PL+ ++ +++ L + + + +
Sbjct: 62 ET-GIKNVTLTGGEPLLQKD--IRSLVEKLLNKSDI-RVEIETNGAV 104
>gi|196231514|ref|ZP_03130372.1| RNA modification enzyme, MiaB family [Chthoniobacter flavus
Ellin428]
gi|196224367|gb|EDY18879.1| RNA modification enzyme, MiaB family [Chthoniobacter flavus
Ellin428]
Length = 463
Score = 37.2 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 69/225 (30%), Gaps = 47/225 (20%)
Query: 59 QFIPQKEEL----NILPEEREDPIGDNNHSPLKGIVHRYPD---RILLKLLHVCPVYCRF 111
Q I +K EL + + S H + + ++ C ++C F
Sbjct: 115 QIIQRKRELRERLMDDARFSIVDVEEEAGSQETIREHVLTEKQATAFVSIMQGCNMHCTF 174
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLILSHKRLQK----- 164
C + S+ E + ++ + EV G + +K
Sbjct: 175 C-----IVPSTRGAERSRRIEEIVHEVEGLVARGVKEVTLLGQIVNLFGRHEFEKQDGKS 229
Query: 165 ----VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+L+ + I+ ++ LRF S PI +L+ E K + H + P +
Sbjct: 230 PFVQLLEAVHAIEGLKRLRFTSPHPIG----FRDDLVNAFAELPK---LMPHVHLPMQ-- 280
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ R+ A + +G E +L R
Sbjct: 281 ----SGSDRILKA---------MHRGYT--AEKYFSLTEKLRAAR 310
>gi|312880406|ref|ZP_07740206.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
gi|310783697|gb|EFQ24095.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
Length = 603
Score = 37.2 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 78/254 (30%), Gaps = 48/254 (18%)
Query: 52 PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
P P+ RQ + +E + D P IVH DR+ +++ C CRF
Sbjct: 212 PRTPVRRQVLADLDE---------GFLQDRMLVPSTAIVH---DRVAVQVFRGCTRGCRF 259
Query: 112 CFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLIL---SHKRLQKVL 166
C + + +S + L + + EV F L L L++ L
Sbjct: 260 CQAGMIDRPVRERSAASVCDQVKRLLDF----TGWEEVGF-----LSLATCDWSGLEEAL 310
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
L I ++ +P + + EL L+ K + A
Sbjct: 311 VRLDEI--LRPRSIKLSLPSLRMDAFSVELAAKLETLRK-----------GGLTFAPEAG 357
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
RL + ++++ V + I E V+L Y
Sbjct: 358 TQRLRD----VINKGVTEEDIRASLEATFAHGWDRVKL-----YFMMGLPTETEEDLEGI 408
Query: 287 IEEGQKIVASLKEK 300
+ ++ V + +
Sbjct: 409 VRIAKETVRTARAH 422
>gi|313117027|ref|YP_004038151.1| predicted Fe-S oxidoreductase [Halogeometricum borinquense DSM
11551]
gi|312294979|gb|ADQ69015.1| predicted Fe-S oxidoreductase [Halogeometricum borinquense DSM
11551]
Length = 403
Score = 37.2 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 15/143 (10%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL+ + + P + ++ L C +YC C+ + G
Sbjct: 10 ELDAEGDGLRYDAASESSKPQITEEKQRRPVVVWNLTKRCNLYCAHCYAAADTETAPGE- 68
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH--KRLQKVLKTLRYIKHVQILRFHSR 183
LS+ + + L + + V+F+GG+PL+ + ++ R I+ V +
Sbjct: 69 LSTAEGKRLLDDL-ADYGVPVVLFSGGEPLVRDDVVELVEYAAD--RGIRPV----LSTN 121
Query: 184 VPIVDPQRINPELIQCLKEAGKP 206
+ I PE + L++AG
Sbjct: 122 GTL-----ITPEKARALRDAGLQ 139
>gi|83945537|ref|ZP_00957884.1| radical SAM domain protein [Oceanicaulis alexandrii HTCC2633]
gi|83851113|gb|EAP88971.1| radical SAM domain protein [Oceanicaulis alexandrii HTCC2633]
Length = 314
Score = 37.2 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 21/182 (11%)
Query: 96 RILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGD 153
+ L C + C+ C+ + LS D + L I E+ FTGG+
Sbjct: 32 KTLWFNTGTLCNIECKNCYILSSPTNDALVYLSEADVVSYLDEIDALGFGSVEIGFTGGE 91
Query: 154 PLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
P + + ++ L+ H ++L + + + R+ L+ G + + +
Sbjct: 92 PFMNPDMVRLMEVSLER----GH-RVLVLTNAMKPMMRPRVQEGLLDLQARYGDRIEMRL 146
Query: 212 HANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+H + +A + LA G L + N+ RT
Sbjct: 147 SLDHYTRKNHDAERGAGGFDATVEGMQWLAEHGFTLS--AAGRSLWNETDAEARAGFRTL 204
Query: 262 VE 263
+
Sbjct: 205 FD 206
>gi|301053446|ref|YP_003791657.1| coenzyme PQQ synthesis protein [Bacillus anthracis CI]
gi|300375615|gb|ADK04519.1| coenzyme PQQ synthesis protein [Bacillus cereus biovar anthracis
str. CI]
Length = 404
Score = 37.2 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 23/204 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E ++FTGGD
Sbjct: 36 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPM-LVFTGGD 93
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----GKPVY 208
PL+ + K V++ S P V + I L G
Sbjct: 94 PLMRPDV---YDIAEYAVKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGPTAE 150
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
I H + + AI L I + +V+ D E +A L+
Sbjct: 151 IHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEEL------- 203
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQK 292
+ + F + I G++
Sbjct: 204 ------ECVLWSIFFLVPIGRGKE 221
>gi|296241754|ref|YP_003649241.1| radical SAM domain-containing protein [Thermosphaera aggregans DSM
11486]
gi|296094338|gb|ADG90289.1| Radical SAM domain protein [Thermosphaera aggregans DSM 11486]
Length = 557
Score = 37.2 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 91 HR-YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
H+ + + + + + C + C +CF S + + I+++ +
Sbjct: 104 HKNHTALVNMVITNRCNLSCWYCFFYAEASGYV-YEPSLEQIRDMVRSIKKQGVTVAIQL 162
Query: 150 TGGDPLILSHKRLQKVLKTLRY--IKHVQ 176
TGG+PL+ L ++K LR ++H+Q
Sbjct: 163 TGGEPLLRDD--LIDIVKLLRDEGVRHIQ 189
>gi|291522480|emb|CBK80773.1| Radical SAM superfamily [Coprococcus catus GD/7]
Length = 278
Score = 37.2 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
++ +Y ++ L +L C C CF R GS K ++ KD + + E + E
Sbjct: 1 MLKKY--KVNLHVLEACNFRCFHCFSR--FGSNK--IMGLKDWKQIVDNCMESQVVSEFN 54
Query: 149 FTGGDPLILSH 159
GG+PL+
Sbjct: 55 IAGGEPLLYKD 65
>gi|222056564|ref|YP_002538926.1| D,D-heptose 1,7-bisphosphate phosphatase [Geobacter sp. FRC-32]
gi|221565853|gb|ACM21825.1| D,D-heptose 1,7-bisphosphate phosphatase [Geobacter sp. FRC-32]
Length = 196
Score = 37.2 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 218 EFSEEAIAAISRLANAG---IILLSQSVLLKGINDDPEILANLMRTFVEL-----RIKPY 269
+ +A AI L AG +++ +QS + +G D+ ++ EL RI +
Sbjct: 30 QMIPDAPEAIRLLNEAGFLVVVVTNQSGIGRGYYDELKLEKLHCHMEKELAKEGARIDAW 89
Query: 270 YLHHPDLAAGTSHFR 284
Y GT H+R
Sbjct: 90 YFCPHHPKHGTGHYR 104
>gi|332880704|ref|ZP_08448377.1| iron-only hydrogenase maturation rSAM protein HydG [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|332681338|gb|EGJ54262.1| iron-only hydrogenase maturation rSAM protein HydG [Capnocytophaga
sp. oral taxon 329 str. F0087]
Length = 474
Score = 37.2 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 92/276 (33%), Gaps = 34/276 (12%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSS 128
++D + Y +RI++ + C C +C + + L+
Sbjct: 63 GQQDLTEEMFALARDIKQRFYGNRIVMFAPLYLSNYCVNGCVYCPYHAKNKTIRRRKLTQ 122
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRV 184
++ + +Q+ + TG DP + + + ++T+ IKH ++ + +
Sbjct: 123 EEIRREVIALQDMGHKRLALETGEDPRNNPIEYVLESIRTIYGIKHKNGAIRRVNVNIAA 182
Query: 185 PIVDPQR-------INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-I 236
V+ R L Q + + Y +H P A+ R GI
Sbjct: 183 TTVENYRRLKDAGIGTYILFQ--ETYNRTNYELLHPTGPKSDYAYHTEAMDRAMTGGIDD 240
Query: 237 LLSQSVLLKGINDDPEILANLM----RTFVELRIKPYYLHHPDLAAG----TSHFR--LT 286
+ +L G+ L+ + P+ + P L T+ F+ +
Sbjct: 241 VG--IGVLFGLETYRYDFIGLLMHAEHLEARFGVGPHTISVPRLCPADDIDTADFKNCVP 298
Query: 287 IEEGQKIVASLKEKIS--GLCQPFYILDLPGGYGKV 320
E KIVA L+ + G+ + P KV
Sbjct: 299 DEIFHKIVAVLRIAVPYTGMIVST--RETPASREKV 332
>gi|294011401|ref|YP_003544861.1| molybdenum cofactor biosynthesis protein A [Sphingobium japonicum
UT26S]
gi|292674731|dbj|BAI96249.1| molybdenum cofactor biosynthesis protein A [Sphingobium japonicum
UT26S]
Length = 334
Score = 37.2 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + CR+C M + +L+ ++ A LA + + + TGG+PL+
Sbjct: 24 VTDRCDLRCRYCMAERMTFLPRDQILTLEEI-ALLADLFIARGVRRIRLTGGEPLVRRD 81
>gi|261403758|ref|YP_003247982.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
gi|261370751|gb|ACX73500.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
Length = 471
Score = 37.2 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + + C + C+ C+ G L++++ E + I + + + F+GG+
Sbjct: 112 PFLVVWDITYRCNLRCKHCYANA--GRPLEDELTTEEAEKVID-ILGDAGVVAIAFSGGE 168
Query: 154 PLILSH 159
PL+
Sbjct: 169 PLMRKD 174
>gi|227533564|ref|ZP_03963613.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227188768|gb|EEI68835.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 103
Score = 37.2 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 34/92 (36%)
Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
++ E+ + AG+I L++ +++ I + + R+ ++
Sbjct: 12 WTRESREKVKAAIKAGLITLTRIIVMNVHGSKGVINQTQRQKLITSRLSLKHIKTRGPYR 71
Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
HF+ + G ++ +++ + +
Sbjct: 72 QLKHFKTSSSYGIELTRRMQKSKPNIAINKLV 103
>gi|257075637|ref|ZP_05569998.1| molybdenum cofactor biosynthesis protein A [Ferroplasma acidarmanus
fer1]
Length = 315
Score = 37.2 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 66/165 (40%), Gaps = 26/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
++L +C +C FC M G+++ ++ + E +A + + ++ FTGG+PL+
Sbjct: 23 IQLNAICNFHCIFC---HMEGTERSMQYMTPEQIENVVA-VAASHGVNKIKFTGGEPLLR 78
Query: 158 SHKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDP----------QRINPELIQCLKEAGKP 206
+ ++++ R KH+ + + + R+N + + E
Sbjct: 79 ED--ILEIVRRTR--KHITGNISLTTNGVELPKLAKGLKEAGLDRVNISM-HAIDEYNFH 133
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
N F I +AG+ + VL+K IN+D
Sbjct: 134 FITDTKKN----FLPIVKQGIQAARDAGLGPIKINFVLMKNINED 174
>gi|195175072|ref|XP_002028287.1| GL16733 [Drosophila persimilis]
gi|194117419|gb|EDW39462.1| GL16733 [Drosophila persimilis]
Length = 333
Score = 37.2 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKS 142
+ G H Y L C + C +C + V K +L++++ I K
Sbjct: 54 TDTFGRHHTYLRISL---TERCNLRCDYCMPADGVPLQPKANLLTTEEIIRLAR-IFVKQ 109
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ ++ TGG+P + + ++ ++ + ++ + +
Sbjct: 110 GVRKIRLTGGEPTVRRD--IVDMVAEMKALPQLEHVGITTNG 149
>gi|119175686|ref|XP_001240027.1| hypothetical protein CIMG_09648 [Coccidioides immitis RS]
Length = 350
Score = 37.2 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 7/129 (5%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+H ++ P + + + +C ++CR C K +S E L +
Sbjct: 89 MESHQQWP-LLRDTPSVLQINVGKLCNLHCRHCHVEAGPTKTKEN-MSLATIERCLEVLA 146
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
I V TGG P + + Q +++ R + + + +V +R L+
Sbjct: 147 MSPCITTVDITGGAPEL--NPYFQTLVREARKMG--KTV-IDRCNLVVLWERGQEGLVNF 201
Query: 200 LKEAGKPVY 208
L E +
Sbjct: 202 LAEQKVNIV 210
>gi|332799081|ref|YP_004460580.1| Radical SAM domain-containing protein [Tepidanaerobacter sp. Re1]
gi|332696816|gb|AEE91273.1| Radical SAM domain protein [Tepidanaerobacter sp. Re1]
Length = 454
Score = 37.2 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWE 146
Y + L + H C + C++CF + K ++S + + A+ ++ + E
Sbjct: 92 TRHYVKALCLNVAHDCNLRCKYCFASKGDYHGKRELMSIEVGKKAVDFLVEKSGDMKNLE 151
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ F GG+PL ++ +++V+ + I+ + +FH + +N E++Q L E
Sbjct: 152 IDFFGGEPL-MAMNTIKEVISYAKSIEKLCHKKFH-FTITTNALLLNDEVMQYLHEHMDN 209
Query: 207 VYI 209
+ +
Sbjct: 210 IVL 212
>gi|258545316|ref|ZP_05705550.1| molybdenum cofactor biosynthesis protein A [Cardiobacterium hominis
ATCC 15826]
gi|258519419|gb|EEV88278.1| molybdenum cofactor biosynthesis protein A [Cardiobacterium hominis
ATCC 15826]
Length = 323
Score = 37.2 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 6/99 (6%)
Query: 89 IVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
++ Y RI + C C +C G LS + +A
Sbjct: 2 LIDPYARRIAYLRLSVTDFCNYRCVYCLPDGYQGCGSADELSLAEIRTLVAAFAAC-GTE 60
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
++ TGG+P + + + +++ +Q + +
Sbjct: 61 KIRLTGGEPTLRAD--IADIIRICASTPGIQKVALTTNG 97
>gi|30261914|ref|NP_844291.1| coenzyme PQQ synthesis protein, putative [Bacillus anthracis str.
Ames]
gi|47527167|ref|YP_018516.1| coenzyme PQQ synthesis protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|165869387|ref|ZP_02214046.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0488]
gi|167633400|ref|ZP_02391725.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0442]
gi|167638757|ref|ZP_02397032.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0193]
gi|170707334|ref|ZP_02897789.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0389]
gi|177650509|ref|ZP_02933476.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0174]
gi|190566409|ref|ZP_03019327.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis
Tsiankovskii-I]
gi|227815307|ref|YP_002815316.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
CDC 684]
gi|229600588|ref|YP_002866287.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0248]
gi|254684473|ref|ZP_05148333.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
CNEVA-9066]
gi|254724000|ref|ZP_05185786.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A1055]
gi|254734776|ref|ZP_05192488.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
Western North America USA6153]
gi|254741178|ref|ZP_05198866.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
Kruger B]
gi|254755429|ref|ZP_05207463.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
Vollum]
gi|254759966|ref|ZP_05211990.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
Australia 94]
gi|30256540|gb|AAP25777.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
Ames]
gi|47502315|gb|AAT30991.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
'Ames Ancestor']
gi|164714827|gb|EDR20345.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0488]
gi|167513221|gb|EDR88592.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0193]
gi|167531438|gb|EDR94116.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0442]
gi|170127833|gb|EDS96705.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0389]
gi|172083653|gb|EDT68713.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0174]
gi|190562544|gb|EDV16511.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis
Tsiankovskii-I]
gi|227007826|gb|ACP17569.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
CDC 684]
gi|229264996|gb|ACQ46633.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0248]
Length = 377
Score = 37.2 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 23/204 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E ++FTGGD
Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPM-LVFTGGD 66
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----GKPVY 208
PL+ + K V++ S P V + I L G
Sbjct: 67 PLMRPDV---YDIAEYAVKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGPTAE 123
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
I H + + AI L I + +V+ D E +A L+
Sbjct: 124 IHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEEL------- 176
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQK 292
+ + F + I G++
Sbjct: 177 ------ECVLWSIFFLVPIGRGKE 194
>gi|306820795|ref|ZP_07454420.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551185|gb|EFM39151.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 457
Score = 37.2 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + ++S + + AL Y+ E S EV F GG+PL
Sbjct: 99 LHVAHDCNLRCSYCFASQGDFGGDKEIMSLEVGKKALDYLVEHSGNRRNLEVDFFGGEPL 158
Query: 156 I 156
+
Sbjct: 159 M 159
>gi|29346323|ref|NP_809826.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
VPI-5482]
gi|81445146|sp|Q8A9A2|RIMO_BACTN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|29338218|gb|AAO76020.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 436
Score = 37.2 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 15/126 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G S ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISK--SMEEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + + L ++++ + I V+ +R H P +L + ++E Y+
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDNVCKYM 249
Query: 210 AIHANH 215
I H
Sbjct: 250 DIALQH 255
>gi|309791023|ref|ZP_07685560.1| Elongator protein 3/MiaB/NifB [Oscillochloris trichoides DG6]
gi|308226938|gb|EFO80629.1| Elongator protein 3/MiaB/NifB [Oscillochloris trichoides DG6]
Length = 461
Score = 37.2 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 7/66 (10%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WEV 147
Y +R+ L CPV C FC + G ++++ + I+ +V
Sbjct: 185 RNYSERLPLLATKGCPVGCNFCCTPRIYGK----TFRIRESDQMIDEIKAHQNFAGKRDV 240
Query: 148 IFTGGD 153
F+ D
Sbjct: 241 RFSFMD 246
>gi|153806285|ref|ZP_01958953.1| hypothetical protein BACCAC_00541 [Bacteroides caccae ATCC 43185]
gi|149130962|gb|EDM22168.1| hypothetical protein BACCAC_00541 [Bacteroides caccae ATCC 43185]
Length = 436
Score = 37.2 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 33/198 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISKPI--EEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + + L ++++ + I V+ +R H P +L + ++E G Y+
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPIDLFRVMRERGNVCKYM 249
Query: 210 AIHANHP---------YEFSEE-AIAAISRLANA--GIILLSQSVLLKGINDDPEILANL 257
I H + ++E I + GI L + ++++ + E L
Sbjct: 250 DIALQHISDNMLKLMRRQVTKEDTYRLIEQFRKEVPGIHLRT-TLMVGHPGETEEDFEEL 308
Query: 258 MR-----TFVELRIKPYY 270
F + Y
Sbjct: 309 KEFVRKVRFDRMGAFAYS 326
>gi|49184749|ref|YP_028001.1| coenzyme PQQ synthesis protein [Bacillus anthracis str. Sterne]
gi|49178676|gb|AAT54052.1| coenzyme PQQ synthesis protein, putative [Bacillus anthracis str.
Sterne]
Length = 378
Score = 37.2 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 23/204 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E ++FTGGD
Sbjct: 10 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPM-LVFTGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----GKPVY 208
PL+ + K V++ S P V + I L G
Sbjct: 68 PLMRPDV---YDIAEYAVKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGPTAE 124
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
I H + + AI L I + +V+ D E +A L+
Sbjct: 125 IHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEEL------- 177
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQK 292
+ + F + I G++
Sbjct: 178 ------ECVLWSIFFLVPIGRGKE 195
>gi|331090885|ref|ZP_08339729.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 2_1_46FAA]
gi|330405531|gb|EGG85062.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 2_1_46FAA]
Length = 440
Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 15/127 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C +C +C ++ G+ + + + E+ E
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNF--RSVPMERLLKEAEGLAEQGVKELILVAQETTLY 203
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYI 209
G D I K L K+LK L + +Q +R P+ I ELIQ +KE K Y+
Sbjct: 204 GKD--IYGEKSLHKLLKELCKVSGIQWIRI----LYCYPEEITDELIQVMKEEKKICHYL 257
Query: 210 AIHANHP 216
+ H
Sbjct: 258 DLPIQHA 264
>gi|313116969|ref|YP_004038093.1| predicted Fe-S oxidoreductase [Halogeometricum borinquense DSM
11551]
gi|312294921|gb|ADQ68957.1| predicted Fe-S oxidoreductase [Halogeometricum borinquense DSM
11551]
Length = 370
Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C+ C L++ + + L + V+ +GGD
Sbjct: 12 PFVLVWELTQACELACKHCRADAKPNRHPDE-LTTAEGQQLLDEAAQFGDGQLVVLSGGD 70
Query: 154 PLILSH 159
PL
Sbjct: 71 PLARED 76
>gi|268324535|emb|CBH38123.1| conserved hypothetical protein, radical SAM superfamily [uncultured
archaeon]
Length = 394
Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 11/130 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I + + C + C C+ + LS + +A + + E ++FTGG+PL+
Sbjct: 43 IFWNITNKCNLACTHCYINAGLDVDISNELSLAEAKAFIDDLAEMRAPL-ILFTGGEPLM 101
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L T K ++ + + I ++ LK G Y+ I +
Sbjct: 102 RKD---FWELATYATEKGLKT-AISTNGTL-----ITKKVAARLKAVGIE-YVGISLDGA 151
Query: 217 YEFSEEAIAA 226
E + +A+
Sbjct: 152 KEETHDAMRN 161
>gi|258591742|emb|CBE68043.1| Putative pqq coenzyme synthesis protein (pqqE) [NC10 bacterium
'Dutch sediment']
Length = 371
Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 42/228 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGG 152
P I +L C + C C R E + ++ LS+ + +A LA ++ + +++ TGG
Sbjct: 17 PKLIYWELTRACDLVCTHC-RAEAIAARDPFELSTAEAKALLADLRAFGEPPPQLVMTGG 75
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL + LR H + + V + E I L E G +
Sbjct: 76 DPLKRPD-----FFELLR---HGRSIGMPVSVAPSGTPLLTAEAIAALAENG----VMSM 123
Query: 213 ANHPYEFSEEAIAAIS--------------RLANAGIILLSQSVLLKGINDDPEILANL- 257
+ + E+ + A I L +++ PE + L
Sbjct: 124 SLSIDGATAESHDRFRGVAGCFETTMRAIEAVRAAAIPLQINTLV------TPETMPELP 177
Query: 258 --MRTFVELRIKPYYLHHPDLAAGTSHF---RLTIEEGQK--IVASLK 298
R +L I + L + R + E I ++
Sbjct: 178 GVFRLLRDLGIMRWSLFYLIATGRGRALREIRPSEAEALHNWIYDIVR 225
>gi|238921904|ref|YP_002935418.1| queuosine biosynthesis protein QueE [Eubacterium eligens ATCC
27750]
gi|238873576|gb|ACR73284.1| queuosine biosynthesis protein QueE [Eubacterium eligens ATCC
27750]
Length = 221
Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 8/107 (7%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ G R + + C + C +C + + LS + Y+
Sbjct: 5 EKFISINGEGRRTGELAVFIRFKGCNLNCSYCDTKWANEPACDYEELSPDEI---CEYVS 61
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
E I V TGG+PL+ ++ +++ L + + + +
Sbjct: 62 ET-GIKNVTLTGGEPLLQKD--IRSLVEKLLNKSDI-RVEIETNGAV 104
>gi|218133712|ref|ZP_03462516.1| hypothetical protein BACPEC_01581 [Bacteroides pectinophilus ATCC
43243]
gi|217991087|gb|EEC57093.1| hypothetical protein BACPEC_01581 [Bacteroides pectinophilus ATCC
43243]
Length = 447
Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 11/125 (8%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
LK+ C C +C ++ GS + + + E+ ++ L
Sbjct: 149 YLKIAEGCDKCCTYCIIPKVRGSY--RSVPMDELIKQAEDLAEQGVKELILVAQETSLYG 206
Query: 158 SH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIH 212
+ K L ++L L I ++ +R P+ I+ LIQ +K K Y+ +
Sbjct: 207 TDLYGEKSLHRLLHELAAIDGIEWIRI----LYCYPEEIDDTLIQAIKSEPKVCHYLDLP 262
Query: 213 ANHPY 217
H
Sbjct: 263 IQHAN 267
>gi|168187980|ref|ZP_02622615.1| heme biosynthesis [Clostridium botulinum C str. Eklund]
gi|169294199|gb|EDS76332.1| heme biosynthesis [Clostridium botulinum C str. Eklund]
Length = 456
Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
+ H C + C++CF E V+S + + A+ ++ S EV GG+PL
Sbjct: 101 VTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVVAHSGPRKNIEVDLFGGEPL 158
>gi|300725257|ref|YP_003714586.1| putative Radical SAM [Xenorhabdus nematophila ATCC 19061]
gi|297631803|emb|CBJ92524.1| putative Radical SAM [Xenorhabdus nematophila ATCC 19061]
Length = 392
Score = 37.2 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 71/207 (34%), Gaps = 23/207 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--------YIQEKSQIWEVI 148
I+LK+ C + C +C+ M S + LA + + ++ +V
Sbjct: 14 IILKISERCNINCSYCYVFNMGNSLATDSPPVISLDNVLALRGFFERSAAENEIEVIQVD 73
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGK 205
F GG+PL++ R ++ LR SR+ + I+ E I ++
Sbjct: 74 FHGGEPLMMKKDRFDQMCDILRQGD-----YSGSRLELALQTNGILIDDEWISLFEKHKV 128
Query: 206 PVYIAI----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I+I H N Y + + G+ +L + + +P IL+ T
Sbjct: 129 HASISIDGPKHINDRYRLDRKGKSTYEGTI-HGLRMLQNAWKQGRLPGEPGILSVANPT- 186
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIE 288
+ Y+ L F +
Sbjct: 187 -ANGAEIYHHFANVLKCQHFDFLIPDA 212
>gi|253584289|ref|ZP_04861487.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
varium ATCC 27725]
gi|251834861|gb|EES63424.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
varium ATCC 27725]
Length = 295
Score = 37.2 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF--CFRREMVGSQKGTVLSSKDTEAAL 135
+ N G ++R P +L V V C C +M +K + + + +
Sbjct: 1 MMMNLEEVWIGDMYRPPSEAYSLILQV-TVGCSHNKCTFCDMYKRKKFFIKPIEQIKREI 59
Query: 136 AYIQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRI 192
+ ++ + E + GD +I+ ++L L+ L YIK V + R S +
Sbjct: 60 DFFRKNVKYAERIFLADGDAMIMPTEKL---LEILAYIKEVFPECKRISSYATHKSIELK 116
Query: 193 NPELIQCLKEAGKPVYIA 210
E ++ ++E G +
Sbjct: 117 TDEELKKIRENGISLLYI 134
>gi|239630288|ref|ZP_04673319.1| transposase [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|239527900|gb|EEQ66901.1| transposase [Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 102
Score = 37.2 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 9/95 (9%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Query: 219 FSEEAIAAISRLA---NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
++ + + ++ AG+I L++ +++ I + + R+ ++
Sbjct: 8 WTRASRETVKKIRAAIKAGLITLTRIIVMNVHGSKGVINQAQRQKLIASRLSLKHIKTRA 67
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
HF+ + G ++ +++ + +
Sbjct: 68 PFRQLKHFKTSSSYGIELTRRMQQSKPNIAINKLV 102
>gi|15613914|ref|NP_242217.1| hypothetical protein BH1351 [Bacillus halodurans C-125]
gi|10173967|dbj|BAB05070.1| BH1351 [Bacillus halodurans C-125]
Length = 448
Score = 37.2 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + + A +Q E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP-KEVIKQAEQLVQA--GYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L + ++ +R S ++ ++ E+I+ + + K
Sbjct: 199 TGGYGED---LKDYSLARLLEDLEQVNGLKRIRISS----IEASQLTDEVIEVIDRSTKV 251
Query: 207 V 207
V
Sbjct: 252 V 252
>gi|148262591|ref|YP_001229297.1| radical SAM domain-containing protein [Geobacter uraniireducens
Rf4]
gi|146396091|gb|ABQ24724.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
Length = 359
Score = 37.2 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 36/117 (30%), Gaps = 10/117 (8%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
I P ++ + C C+ CF + L+ + + + ++ V
Sbjct: 14 IQRHEPFSVVHFVTTRCNARCKHCFIDFSTPIDRANELALDEIVRLARNLGKT--LYNVN 71
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
TGG+P + L ++ V+ + + + LK +
Sbjct: 72 LTGGEPFLRDD--LFDIVSCYIQHTPVRSIVITTNGW------FTDAIRTLLKRYSR 120
>gi|317010985|gb|ADU84732.1| molybdenum cofactor biosynthesis protein A [Helicobacter pylori
SouthAfrica7]
Length = 321
Score = 37.2 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILS 158
+ C C++C + G L + L + I I ++ TGG+PL+
Sbjct: 17 VTKQCNFRCQYCMPATPLNFFDGEELLP--LDNVLEFLKIAIDEGIKKIRITGGEPLLR- 73
Query: 159 HKRLQKVLKTLRY 171
K L + + L
Sbjct: 74 -KGLDEFIARLHA 85
>gi|260463294|ref|ZP_05811495.1| hypothetical protein MesopDRAFT_4142 [Mesorhizobium opportunistum
WSM2075]
gi|259030884|gb|EEW32159.1| hypothetical protein MesopDRAFT_4142 [Mesorhizobium opportunistum
WSM2075]
Length = 297
Score = 36.8 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 28/79 (35%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ D I Q++PQ + +L + ++ + D+ + L+G+V Y D L
Sbjct: 62 DAVDAIRNQYLPQAQNDWVLVLDSDEYLADDAYEALQGLVRDYSDNTDAFALPRFNSVAG 121
Query: 111 FCFRREMVGSQKGTVLSSK 129
R K
Sbjct: 122 HVMRGSGFYPDHQIRFFRK 140
>gi|228933203|ref|ZP_04096059.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228826364|gb|EEM72141.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 383
Score = 36.8 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 23/204 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E ++FTGGD
Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPM-LVFTGGD 72
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----GKPVY 208
PL+ + K V++ S P V + I L G
Sbjct: 73 PLMRPDV---YDIAEYAVKKGVRVSMTPSATPNVTKEAIQKAKEVGLARWAFSLDGPTAE 129
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
I H + + AI L I + +V+ D E +A L+
Sbjct: 130 IHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEEL------- 182
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQK 292
+ + F + I G++
Sbjct: 183 ------ECVLWSIFFLVPIGRGKE 200
>gi|323495441|ref|ZP_08100518.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
brasiliensis LMG 20546]
gi|323310364|gb|EGA63551.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
brasiliensis LMG 20546]
Length = 474
Score = 36.8 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 73/220 (33%), Gaps = 36/220 (16%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
+ ++ C YC +C G + + + L I + + EV G +
Sbjct: 148 TAFVSIMEGCSKYCTYCVVPYTRGEEVSRPM-----DDVLFEIAQLADQGVREVNLLGQN 202
Query: 154 ------PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRI------NPELIQCL 200
P+ ++L+ + I + +RF + P+ I PEL+ L
Sbjct: 203 VNAYRGPMHDGDICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFL 262
Query: 201 -----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI----NDDP 251
+ + + + + E+ + I +L A + S + G D
Sbjct: 263 HLPVQSGSDRILTMMKRPHTAIEY----KSIIRKLRKARPDIQISSDFIVGFPGETAKDH 318
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHF--RLTIEE 289
+ L++ V+ + ++ P + + + +E
Sbjct: 319 QDTMKLIKD-VDFDMSFSFIFSPRPGTPAADYPCDVPEQE 357
>gi|302335095|ref|YP_003800302.1| pyruvate formate-lyase activating enzyme [Olsenella uli DSM 7084]
gi|301318935|gb|ADK67422.1| pyruvate formate-lyase activating enzyme [Olsenella uli DSM 7084]
Length = 253
Score = 36.8 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 9/164 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGG 152
P L L CP+ CR+C + KG+ S+ D + A Y + +GG
Sbjct: 17 PGVRFLIFLQGCPMRCRYCHNVDTWPLDKGSETSADDLLDKAERYRGYWGPQGGITVSGG 76
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ L+ + L+ K + +HV S P +Q + + H
Sbjct: 77 EALLQAEFVLELFTK--AHERHVNTCLDSSLAPFTRTSPFFDTFVQLMGVTDLVLADIKH 134
Query: 213 ANH--PYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + E + + L+ A + + + VL+ GI D+
Sbjct: 135 IDAQEHRSLTGHGNENILDCLRYLSEARVPVWIRHVLVPGITDN 178
>gi|167748881|ref|ZP_02421008.1| hypothetical protein ANACAC_03655 [Anaerostipes caccae DSM 14662]
gi|317470277|ref|ZP_07929671.1| MiaB tRNA modifying enzyme YliG [Anaerostipes sp. 3_2_56FAA]
gi|167651851|gb|EDR95980.1| hypothetical protein ANACAC_03655 [Anaerostipes caccae DSM 14662]
gi|316902250|gb|EFV24170.1| MiaB tRNA modifying enzyme YliG [Anaerostipes sp. 3_2_56FAA]
Length = 445
Score = 36.8 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 11/126 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
LK+ C C +C ++ G + K+ + + V+
Sbjct: 144 HMAYLKIAEGCDKRCSYCIIPKIRGRF--RSVPMKELLKSARELAASGVTELVLVAQETT 201
Query: 155 LILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
L K L +LK L ++ ++ +R P+ I ELI+ +KE K V YI
Sbjct: 202 LYGKDLTGKKELPTLLKELCGVEGIEWIRL----LYCYPEEITDELIRTIKEEEKVVNYI 257
Query: 210 AIHANH 215
+ H
Sbjct: 258 DMPIQH 263
>gi|85707986|ref|ZP_01039052.1| hypothetical protein NAP1_02085 [Erythrobacter sp. NAP1]
gi|85689520|gb|EAQ29523.1| hypothetical protein NAP1_02085 [Erythrobacter sp. NAP1]
Length = 336
Score = 36.8 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Query: 81 NNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALA 136
+ P +V + RI + C + C +C M K VL+ ++ + A
Sbjct: 1 MSGEPRAPLVDSFRRRISYLRLSVTDRCDLRCTYCMPERMTFLPKREVLTLEELYDLASG 60
Query: 137 YIQEKSQIWEVIFTGGDPLILSH---------KRLQKVLKTL 169
+I + ++ TGG+PL+ ++L + L+ L
Sbjct: 61 FI--DRGVTKIRITGGEPLVRRDIVDLIRALGRKLGEGLEEL 100
>gi|291166122|gb|EFE28168.1| Fe-S oxidoreductase [Filifactor alocis ATCC 35896]
Length = 424
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 26/135 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + + S+ E + +++ + EV+ TG
Sbjct: 135 HTRAFVKIQDGCDRFCTYC-----IIPFTRGPVRSRSLENIVYEVKKLVNNGYKEVVLTG 189
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--- 201
D + L V++ L I ++ +R S V+P I + ++ +
Sbjct: 190 IHVASYGKD---TKKETLIDVIERLSTIDGLERIRTSS----VEPIIITEDFLKRVSQVE 242
Query: 202 --EAGKPVYIAIHAN 214
+ + N
Sbjct: 243 QFCPHFHLSLQSGCN 257
>gi|302518288|ref|ZP_07270630.1| molybdenum cofactor biosynthesis protein A [Streptomyces sp. SPB78]
gi|318057729|ref|ZP_07976452.1| molybdenum cofactor biosynthesis protein A [Streptomyces sp.
SA3_actG]
gi|318078320|ref|ZP_07985652.1| molybdenum cofactor biosynthesis protein A [Streptomyces sp.
SA3_actF]
gi|333028034|ref|ZP_08456098.1| putative molybdenum cofactor biosynthesis protein A [Streptomyces
sp. Tu6071]
gi|302427183|gb|EFK98998.1| molybdenum cofactor biosynthesis protein A [Streptomyces sp. SPB78]
gi|332747886|gb|EGJ78327.1| putative molybdenum cofactor biosynthesis protein A [Streptomyces
sp. Tu6071]
Length = 329
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI--- 156
L C + C +C E + K +L+ ++ + + I +V FTGG+PL+
Sbjct: 17 LTDRCNLRCTYCMPEEGLQWLGKPELLTDEEIVRLVRLAVTRLGITDVRFTGGEPLLRRG 76
Query: 157 LSHKRLQKVLKTLRYIK--HVQILRFH-SRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L L + L + +R + + L V+ H
Sbjct: 77 LVD--LVRRCALLDPRPKLSLTTNGIGLARTATALAEAGLDRVNVSLDTLDAEVF---HR 131
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + +A ++ +AG+ + +VL+ G+N+D
Sbjct: 132 LTRRDRHHDVLAGLAAARDAGLTPVKVNTVLMPGLNED 169
>gi|153939858|ref|YP_001392342.1| radical SAM domain-containing protein [Clostridium botulinum F str.
Langeland]
gi|152935754|gb|ABS41252.1| radical SAM domain protein [Clostridium botulinum F str. Langeland]
gi|295320334|gb|ADG00712.1| radical SAM domain protein [Clostridium botulinum F str. 230613]
Length = 455
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLIL 157
+ H C + C++CF E K ++S + A+ ++ EKS EV GG+PL+
Sbjct: 101 IAHDCNLRCKYCFADEGEYKGKRELMSPGVGKKAIDFVIEKSGPRKNIEVDLFGGEPLMA 160
Query: 158 --SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ K + + K + KH + +RF + +N E+++ L + + + +
Sbjct: 161 FSTIKEIVEYAKE-KEEKHNKTIRFT---MTTNGTLLNQEIMEYLDKNMGNIVL--SIDG 214
Query: 216 PYEFSEEAIAAIS 228
E ++ +
Sbjct: 215 RKEINDNVRVRVD 227
>gi|49477412|ref|YP_036045.1| coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49328968|gb|AAT59614.1| coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 377
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 23/204 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E ++FTGGD
Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPM-LVFTGGD 66
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----GKPVY 208
PL+ + K V++ S P V + I L G
Sbjct: 67 PLMRPDV---YDIAEYAVKKGVRVSMTPSATPNVTKEAIQKAKEVGLARWAFSLDGPTAE 123
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
I H + + AI L I + +V+ D E +A L+
Sbjct: 124 IHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEEL------- 176
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQK 292
+ + F + I G++
Sbjct: 177 ------ECVLWSIFFLVPIGRGKE 194
>gi|55380018|ref|YP_137868.1| coenzyme PQQ synthesis protein [Haloarcula marismortui ATCC 43049]
gi|55232743|gb|AAV48162.1| coenzyme PQQ synthesis protein [Haloarcula marismortui ATCC 43049]
Length = 357
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C+ C LS+ + +A L E V+ +GGD
Sbjct: 11 PLVLIWEVTQACELACKHCRADAQPRRHPDE-LSTAEGKALLDQASEFGDGQLVVLSGGD 69
Query: 154 PLILSH 159
PL
Sbjct: 70 PLARGD 75
>gi|222528212|ref|YP_002572094.1| thiamine biosynthesis protein ThiH [Caldicellulosiruptor bescii DSM
6725]
gi|222455059|gb|ACM59321.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
bescii DSM 6725]
Length = 477
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 31/232 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C CR+C K L+ + + I+ + G DP
Sbjct: 87 LYISNFCVNNCRYCGYHRSNTKMKRRKLTMDEIRKEVEIIESLGHKRIALELGEDP---K 143
Query: 159 HKRLQKVLKTLRYI-------KHVQILRFHSRVPIVDPQRINPE-----LIQCLKEAGKP 206
++ V+ ++ I +++ + + ++ R+ E + + +P
Sbjct: 144 EAPIEYVIDAIKTIYSVYKEKGNIRRVNVNIAATTIEEYRMLKEAKIGTYVLFQETYHRP 203
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLMRTFVE 263
Y +H P + A+ R GI L L + ++ +
Sbjct: 204 TYEYMHPEGPKSDYDWHTMAMDRAMQGGIDDVGLGVLFGLYDYKFEVVGLILHAKHLEER 263
Query: 264 LRIKPYYLHHPD--------LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ + P + + ++ +E +KIVA ++ L P
Sbjct: 264 FGVGPHTISVPRIRPAEGVEVTKERYPYLVSDDEFKKIVAIIR-----LAVP 310
>gi|172044646|sp|Q2IIW6|LIPA_ANADE RecName: Full=Lipoyl synthase; AltName: Full=Lip-syn; Short=LS;
AltName: Full=Lipoate synthase; AltName: Full=Lipoic
acid synthase; AltName: Full=Sulfur insertion protein
lipA
Length = 294
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 61/191 (31%), Gaps = 28/191 (14%)
Query: 98 LLKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
++ + VC CRFC + + L++ E L YI S + + GG
Sbjct: 54 VMLMGDVCTRGCRFCNVKTAAHPPALDPDEPRHLAAAIAELGLDYIVVTSVDRDDLPDGG 113
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
++ L+ I + + + R +P ++ + A V+
Sbjct: 114 ------AAHFADAIRRLKEIPGLLV------EVLTPDFRGDPAAVRTVGRAAPDVFANN- 160
Query: 213 ANHPYEFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ ++++ ++++S ++ G+ + + MR
Sbjct: 161 LETVRRLTPAVRDAKATYDQTLGVLAQMKREFPQVVTKSSIMVGLGEQEAEVVEAMRDLR 220
Query: 263 ELRIKPYYLHH 273
++ L
Sbjct: 221 ANGVEILTLGQ 231
>gi|148554439|ref|YP_001262021.1| GTP cyclohydrolase subunit MoaA [Sphingomonas wittichii RW1]
gi|148499629|gb|ABQ67883.1| GTP cyclohydrolase subunit MoaA [Sphingomonas wittichii RW1]
Length = 346
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 83 HSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
G+ + RI + C CR+C +M K +L+ ++ A
Sbjct: 9 DRGGTGLADAFGRRITYLRLSVTDRCDFRCRYCMAEKMQFLPKREILTIEELAALADAFI 68
Query: 140 EKSQIWEVIFTGGDPLI 156
I ++ TGG+PL+
Sbjct: 69 A-RGIRKIRLTGGEPLV 84
>gi|312623428|ref|YP_004025041.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203895|gb|ADQ47222.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
kronotskyensis 2002]
Length = 477
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 31/232 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C CR+C K L+ + + I+ + G DP
Sbjct: 87 LYISNFCVNNCRYCGYHRSNTKMKRRKLTMDEIRKEVEIIESLGHKRIALELGEDP---K 143
Query: 159 HKRLQKVLKTLRYI-------KHVQILRFHSRVPIVDPQRINPE-----LIQCLKEAGKP 206
++ V+ ++ I +++ + + ++ R+ E + + +P
Sbjct: 144 EAPIEYVIDAIKTIYSVYKEKGNIRRVNVNIAATTIEEYRMLKEAKIGTYVLFQETYHRP 203
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLMRTFVE 263
Y +H P + A+ R GI L L + ++ +
Sbjct: 204 TYEYMHPEGPKSDYDWHTMAMDRAMQGGIDDVGLGVLFGLYDYKFEVVGLILHAKHLEER 263
Query: 264 LRIKPYYLHHPD--------LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ + P + + ++ +E +KIVA ++ L P
Sbjct: 264 FGVGPHTISVPRIRPAEGVEVTKERYPYLVSDDEFKKIVAIIR-----LAVP 310
>gi|311029975|ref|ZP_07708065.1| ribosomal RNA large subunit methyltransferase N [Bacillus sp.
m3-13]
Length = 363
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 77/242 (31%), Gaps = 33/242 (13%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+ H Y + + + C + C FC +R + + + + AL +
Sbjct: 110 MKHEYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVK--VQQALDEM--DE 165
Query: 143 QIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
++ V+ G G+P ++L L+ I H Q L +R V I P+ I
Sbjct: 166 RVSHVVIMGIGEPF----DNFDEMLDFLKIINHDQALNIGARHITVSTSGIIPK-IYKFA 220
Query: 202 EAGKPVYIAIH--------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
+ + A+ N Y+ + + + G + + L G+
Sbjct: 221 DENMQINFAVSLHAPNTEIRSRLMPINRAYKLPDLMESIRYYINKTGRRVSFEYGLFGGV 280
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND E L + ++ + + R E+ + + + G+
Sbjct: 281 NDQVEHAEELAQLLKGMKCHVNLIPVN-YVPERDYVRTPKEQ-INLFEKTLKNL-GVNVT 337
Query: 308 FY 309
Sbjct: 338 VR 339
>gi|325108328|ref|YP_004269396.1| RNA modification enzyme, MiaB family [Planctomyces brasiliensis DSM
5305]
gi|324968596|gb|ADY59374.1| RNA modification enzyme, MiaB family [Planctomyces brasiliensis DSM
5305]
Length = 491
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 58/195 (29%), Gaps = 29/195 (14%)
Query: 54 DPIARQF--IPQKEELNILPEEREDPIGDNN-HSPLKGIVHRY-PDRILLKLLHVCPVYC 109
DP +Q +P E+ E D + + H GI H R +K+ C + C
Sbjct: 147 DP--QQVADLPGVFEVVTDKRELPDILERHGIHDMPVGISHFEGRKRAYVKVQDGCILKC 204
Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-----------S 158
+C S + E + + + E++ TG
Sbjct: 205 TYCIIPS--VRPGLQSRSPQQIEEEVRRLVDNGY-REIVITGVHVGHYGVDTTRGKSGKP 261
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
RL + + L I +R S + IN + I + + HP
Sbjct: 262 PFRLWHLFQKLDKIPGDWRMRLSSIEAV----EINDDFISAAADCEH---LCPQF-HPA- 312
Query: 219 FSEEAIAAISRLANA 233
+ + R+
Sbjct: 313 LQSGSETVLRRMRRR 327
>gi|320010716|gb|ADW05566.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331]
Length = 361
Score = 36.8 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 55/143 (38%), Gaps = 9/143 (6%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL L CP+ C C + +++ + + +++ V+ TGG+PL+
Sbjct: 17 LLLGLTRRCPLSCAHCSTGSSLTTREE--PDADRLVRFVGSFTRENRPDVVMLTGGEPLL 74
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANH 215
L ++++ R S + + I P +++ ++ + H H
Sbjct: 75 LPA-LVEELSARARAAGS--RTALLSGMFFARSREIPPPVLRAIRGVDHFSASLDAH--H 129
Query: 216 PYEF-SEEAIAAISRLANAGIIL 237
E + A+ R+ G+ +
Sbjct: 130 EREIPRADVFRAVHRIRETGVAV 152
>gi|299132741|ref|ZP_07025936.1| Radical SAM domain protein [Afipia sp. 1NLS2]
gi|298592878|gb|EFI53078.1| Radical SAM domain protein [Afipia sp. 1NLS2]
Length = 473
Score = 36.8 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGGD 153
I L++ C + C C+ E S+ L ++ + I+E +V TGGD
Sbjct: 66 GCIALEITQRCNLDCGACYLSEH--SEAVKDLPLEEVYRRIELIRETYGSDVDVQVTGGD 123
Query: 154 PLILSHKRLQKVLKTLRYI 172
P + L +++ LR I
Sbjct: 124 PTLRKRDELIAIVRRLREI 142
>gi|260773261|ref|ZP_05882177.1| tRNA-i(6)A37 methylthiotransferase [Vibrio metschnikovii CIP 69.14]
gi|260612400|gb|EEX37603.1| tRNA-i(6)A37 methylthiotransferase [Vibrio metschnikovii CIP 69.14]
Length = 474
Score = 36.8 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 74/218 (33%), Gaps = 34/218 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
+ ++ C YC +C G + + + L I + + EV G +
Sbjct: 148 TAFVSIMEGCSKYCTYCVVPYTRGEEVSRPM-----DDVLYEIAQLAAQGVREVNLLGQN 202
Query: 154 ------PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRI------NPELIQCL 200
P+ ++L+ + I + +RF + P+ I PEL+ L
Sbjct: 203 VNAYRGPMHDGTICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFL 262
Query: 201 -----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI----NDDP 251
+ + + + + E+ + I +L A + S + G ++D
Sbjct: 263 HLPVQSGSDRILTMMKRPHTAIEY----KSIIRKLRKARPDIQISSDFIVGFPGESDNDF 318
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
+ L+R V+ + ++ P + + + E
Sbjct: 319 QATMKLIRD-VDFDMSFSFIFSPRPGTPAADYPCDVSE 355
>gi|153816137|ref|ZP_01968805.1| hypothetical protein RUMTOR_02385 [Ruminococcus torques ATCC 27756]
gi|145846472|gb|EDK23390.1| hypothetical protein RUMTOR_02385 [Ruminococcus torques ATCC 27756]
Length = 266
Score = 36.8 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 25/134 (18%)
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
E G D + K L ++++ L I ++ +R P+ I ELI+ +K+
Sbjct: 24 QETTLYGKD--LYGEKCLHRLVEELCKIAGIRWIRI----LYCYPEEITDELIEVIKKEP 77
Query: 205 KP-VYIAIHANHP--------------YEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
K Y+ + H E ++ +L + ++ L+ G
Sbjct: 78 KVCHYLDLPIQHASDSILKRMGRRTSKQELTDIVK----KLRKEIPDICLRTTLITGFPG 133
Query: 250 DPEILANLMRTFVE 263
+ E + FV+
Sbjct: 134 ETEDQHEELMQFVD 147
>gi|315655148|ref|ZP_07908050.1| molybdopterin cofactor biosynthesis protein A [Mobiluncus curtisii
ATCC 51333]
gi|315490629|gb|EFU80252.1| molybdopterin cofactor biosynthesis protein A [Mobiluncus curtisii
ATCC 51333]
Length = 361
Score = 36.8 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C + C +C R V + +L + + + + I +V TGG+PL+
Sbjct: 40 VTDRCDLRCSYCLPRGGVKWVPRRELLDASEILRLVGIAIHRLGITQVRLTGGEPLLRPD 99
>gi|59711366|ref|YP_204142.1| isopentenyl-adenosine A37 tRNA methylthiolase [Vibrio fischeri
ES114]
gi|197335117|ref|YP_002155521.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio fischeri MJ11]
gi|75354378|sp|Q5E6U2|MIAB_VIBF1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229891024|sp|B5FBL3|MIAB_VIBFM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|59479467|gb|AAW85254.1| isopentenyl-adenosine A37 tRNA methylthiolase [Vibrio fischeri
ES114]
gi|197316607|gb|ACH66054.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio fischeri MJ11]
Length = 474
Score = 36.8 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 81/232 (34%), Gaps = 36/232 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
+ ++ C YC +C V S+ + L I + + + EV G +
Sbjct: 148 TAFVSIMEGCSKYCTYC-----VVPYTRGEEVSRPLDDVLFEIAQLAEQGVREVNLLGQN 202
Query: 154 ------PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRI------NPELIQCL 200
P+ ++L+ + I + LRF + P+ I PEL+ L
Sbjct: 203 VNAYRGPMHDGDICTFAELLRMVASIDGIDRLRFTTSHPLEFGDDIIAVYEDTPELVSFL 262
Query: 201 -----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI----NDDP 251
+ + + + + E+ + I +L A + S + G D
Sbjct: 263 HLPVQSGSDRILTMMKRPHTAIEY----KSIIRKLRKARPDIQISSDFIVGFPGETAKDF 318
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHF--RLTIEEGQKIVASLKEKI 301
+ L++ V+ + ++ + + + +E + +A L++++
Sbjct: 319 QDTMKLIKD-VDFDMSFSFIFSARPGTPAADYPCDIPEQEKKDRLAELQQQV 369
>gi|310826527|ref|YP_003958884.1| 2-methylthioadenine synthetase [Eubacterium limosum KIST612]
gi|308738261|gb|ADO35921.1| 2-methylthioadenine synthetase [Eubacterium limosum KIST612]
Length = 435
Score = 36.8 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 50/136 (36%), Gaps = 12/136 (8%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
D + ++++ L + R LK+ C +C +C + +
Sbjct: 118 KTQNNFVSDIMREHHYEDLNITETKGKTRAFLKVQEGCNQFCTYC-----IVPFARGPVR 172
Query: 128 SKDTEAALAYIQ--EKSQIWEVIFTGGDPLI----LSHKR-LQKVLKTLRYIKHVQILRF 180
S+ +A L+ ++ EV+ TG L L +++ + ++ V+ +R
Sbjct: 173 SRPVDAVLSEVKRVAAHGYAEVVLTGIHIASYGVDLGDGVDLLSLIRAVDKVEGVKRIRL 232
Query: 181 HSRVPIVDPQRINPEL 196
S P++ + L
Sbjct: 233 GSLEPLLLTEEFVQGL 248
>gi|220926474|ref|YP_002501776.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
nodulans ORS 2060]
gi|219951081|gb|ACL61473.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
nodulans ORS 2060]
Length = 346
Score = 36.8 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 15/167 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
+ C + C +C +M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 34 VTDRCDLRCVYCMAEDMTFLPKRDLLTLEELDRVCSVFVAH-GVRKLRITGGEPLVRRDI 92
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L + L + L + Q + L V + P +F
Sbjct: 93 MHLFRGLSRHLASGALDELTLTTNG-TQLKQHAAE--LADLGVRRINVSLDT--LDPQKF 147
Query: 220 SEEAIA--------AISRLANAGIILLSQSVLLKGINDDPEILANLM 258
I+ AG+ + +V LKG+N+D +
Sbjct: 148 RAITRRGDLSVVLDGITAARAAGLKVKLNAVALKGVNEDEIVPMLAW 194
>gi|188995259|ref|YP_001929511.1| putative anaerobic ribonucleoside-triphosphate reductase activating
protein [Porphyromonas gingivalis ATCC 33277]
gi|188594939|dbj|BAG33914.1| putative anaerobic ribonucleoside-triphosphate reductase activating
protein [Porphyromonas gingivalis ATCC 33277]
Length = 167
Score = 36.8 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P L C C C + G +++ + I + + +GGD
Sbjct: 28 PGLHYSIYLAGCRHACPGCHNPSSWDPEAGVLMTDSILGNIIREINANPLLDGITLSGGD 87
Query: 154 PLILSHKRLQKVLKTLRY 171
P L +L+ LR
Sbjct: 88 PFYNPAG-LTCLLQRLRA 104
>gi|34540964|ref|NP_905443.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas gingivalis W83]
gi|34397279|gb|AAQ66342.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas gingivalis W83]
gi|117307495|dbj|BAF36484.1| activator protein for anaerobic ribonucleotide reductase
[Porphyromonas gingivalis]
Length = 163
Score = 36.8 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P L C C C + G +++ + I + + +GGD
Sbjct: 24 PGLHYSIYLAGCRHACPGCHNPSSWDPEAGVLMTDSILGNIIREINANPLLDGITLSGGD 83
Query: 154 PLILSHKRLQKVLKTLRY 171
P L +L+ LR
Sbjct: 84 PFYNPAG-LTCLLQRLRA 100
>gi|156317039|ref|XP_001618027.1| hypothetical protein NEMVEDRAFT_v1g225585 [Nematostella vectensis]
gi|156197044|gb|EDO25927.1| predicted protein [Nematostella vectensis]
Length = 157
Score = 36.8 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 119 GSQKGTVLSSKDTEAALA----YIQEKSQIW-EVIFTGGDPLILSHKRLQKVLKTLRYIK 173
+ +S +A + YI + +F GG+PL++ KR +++L+ L+ I+
Sbjct: 9 YKNQPKFMSEDTIDAVIEKAKLYIIKNKLTTFNFLFHGGEPLLMEKKRFKEMLQKLKEIE 68
Query: 174 HV 175
+
Sbjct: 69 GI 70
>gi|312128648|ref|YP_003993522.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
hydrothermalis 108]
gi|311778667|gb|ADQ08153.1| biotin and thiamin synthesis associated [Caldicellulosiruptor
hydrothermalis 108]
Length = 477
Score = 36.8 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 77/232 (33%), Gaps = 31/232 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C CR+C K L+ + + I+ + G DP
Sbjct: 87 LYISNFCVNNCRYCGYHRSNTKMKRRKLTMDEIRKEVEIIESLGHKRIALELGEDP---K 143
Query: 159 HKRLQKVLKTLRYI-------KHVQILRFHSRVPIVDPQRINPE-----LIQCLKEAGKP 206
++ V+ +++ I +++ + + ++ R+ E + + +P
Sbjct: 144 EAPIEYVIDSIKTIYSVYKEKGNIRRVNVNIAATTIEEYRMLKEAKIGTYVLFQETYHRP 203
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLMRTFVE 263
Y +H P + A+ R GI L L + ++ +
Sbjct: 204 TYEYMHPEGPKSDYDWHTMAMDRAMQGGIDDVGLGVLFGLYDYKFEVVGLILHAKHLEER 263
Query: 264 LRIKPYYLHHPD--------LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ + P + + ++ +E +KIVA ++ L P
Sbjct: 264 FGVGPHTISVPRIRPAEGVEVTKERYPYLVSDDEFKKIVAIIR-----LAVP 310
>gi|329937449|ref|ZP_08287007.1| Inner membrane protein [Streptomyces griseoaurantiacus M045]
gi|329303325|gb|EGG47212.1| Inner membrane protein [Streptomyces griseoaurantiacus M045]
Length = 304
Score = 36.8 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 49/165 (29%), Gaps = 19/165 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLILS 158
L C C +C + S + E + ++ + G+ L+ S
Sbjct: 10 PLASCDYDCPYCPFAKRRDSTEQLRADRAALERFAHWAAGQTDDRLSLLFTPWGEGLVRS 69
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
R + L L ++ H++ + + + L EA HP +
Sbjct: 70 WYR--RTLAELSHLPHIRRVAIQTNLSC---------RTDWLAEAEPDTLALWCTYHPGQ 118
Query: 219 FSEEAIA--AISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ LA G+ SV + G+ + + L
Sbjct: 119 -TPYDRFLGKCRELAERGVRF---SVGIVGLPEHLKAARRLRTEL 159
>gi|30024197|emb|CAD54905.1| putative lysogenic conversion protein [Enterobacteria phage
P2-EC48]
Length = 216
Score = 36.8 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E +DP D+ + + H YP+ +++ + + Y ++ G L ++ E
Sbjct: 101 EVQDPELDDKETVELILAHSYPNILMIVDVMLVNPYEPVIPQKYDFQEYHGLGLFAELLE 160
Query: 133 AALAYIQEKSQIWEVIFTGGD-PL 155
A+ Y ++ I E+ T D PL
Sbjct: 161 NAIQYCKQ-EGIEEIYLTAADIPL 183
>gi|331269245|ref|YP_004395737.1| Radical SAM domain-containing protein [Clostridium botulinum
BKT015925]
gi|329125795|gb|AEB75740.1| Radical SAM domain protein [Clostridium botulinum BKT015925]
Length = 456
Score = 36.8 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
+ H C + C++CF E V+S + + A+ ++ S EV GG+PL
Sbjct: 101 VTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 158
>gi|253682419|ref|ZP_04863216.1| heme biosynthesis [Clostridium botulinum D str. 1873]
gi|253562131|gb|EES91583.1| heme biosynthesis [Clostridium botulinum D str. 1873]
Length = 456
Score = 36.8 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
+ H C + C++CF E V+S + + A+ ++ S EV GG+PL
Sbjct: 101 VTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 158
>gi|228914502|ref|ZP_04078111.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228844821|gb|EEM89863.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 383
Score = 36.8 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 23/204 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E ++FTGGD
Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPM-LVFTGGD 72
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----GKPVY 208
PL+ + K V++ S P V + I L G
Sbjct: 73 PLMRPDV---YDIAEYAVKKGVRVSMTPSATPNVTKEAIQKAKEVGLARWAFSLDGPTAE 129
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
I H + + AI L I + +V+ D E +A L+
Sbjct: 130 IHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEEL------- 182
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQK 292
+ + F + I G++
Sbjct: 183 ------ECVLWSIFFLVPIGRGKE 200
>gi|225572948|ref|ZP_03781703.1| hypothetical protein RUMHYD_01139 [Blautia hydrogenotrophica DSM
10507]
gi|225039694|gb|EEG49940.1| hypothetical protein RUMHYD_01139 [Blautia hydrogenotrophica DSM
10507]
Length = 481
Score = 36.8 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 36/162 (22%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHR----------------------------YPDRI 97
EL E+ P + G+ HR Y +RI
Sbjct: 35 ELIDQILEKARPRFTEKGTFCTGLTHREASVLLACTIPEKIQEMYSLAEEIKRAFYGNRI 94
Query: 98 LLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
++ + C C +C L+ ++ +A + +Q+ I +G D
Sbjct: 95 VIFAPLYLSNYCVNGCLYCPYHMKNKHIPRKKLTQEEVKAEVIALQDMGHKRLAIESGED 154
Query: 154 PLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR 191
P + + + + + T+ IKH ++ + + V+ R
Sbjct: 155 PKMNPIEYILECIDTIYSIKHKNGAIRRVNVNIAATTVENYR 196
>gi|118444426|ref|YP_877912.1| Heme biosynthesis [Clostridium novyi NT]
gi|118134882|gb|ABK61926.1| Heme biosynthesis [Clostridium novyi NT]
Length = 431
Score = 36.8 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
+ H C + C++CF E V+S + + A+ ++ S EV GG+PL
Sbjct: 76 VTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 133
>gi|187925302|ref|YP_001896944.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phytofirmans
PsJN]
gi|229890466|sp|B2SYI5|MIAB_BURPP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|187716496|gb|ACD17720.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phytofirmans
PsJN]
Length = 457
Score = 36.8 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 23/133 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203
Query: 154 -----PLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L L + ++ + I ++ +R+ + P+ LI + K
Sbjct: 204 NAYRAGLTLGSTEIADFAQLIEYVADIPGIERIRYTTS----HPKEFTQRLIDTYAKVPK 259
Query: 206 PVYIAIHANHPYE 218
+ H + P +
Sbjct: 260 ---LVSHLHLPVQ 269
>gi|14520767|ref|NP_126242.1| molybdenum cofactor biosynthesis protein a related [Pyrococcus
abyssi GE5]
gi|5457983|emb|CAB49473.1| mooA-like molybdenum cofactor biosynthesis protein A related
[Pyrococcus abyssi GE5]
Length = 419
Score = 36.8 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 33/184 (17%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKS 142
G++ R + I ++ C + C FC E S+ + D + L + ++
Sbjct: 108 GLIDRGTNLIQVRGSTGCNMRCIFCSVDEGPYSRTRKLDFVVDIDYLLKWFDWVAKEKGK 167
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ + G+PL+ + ++++ LR HV ++ S ++ N +L++ L E
Sbjct: 168 GLEAHLDAQGEPLLYP--FIVELVQALREHPHVSVISMQSNGVLL-----NDKLVEELAE 220
Query: 203 AGK-PVYIAIHANHPYEFSEE---------------AIAAISRLANAGIILLSQSVLLKG 246
AG V ++IH E + L NAGI +L V++ G
Sbjct: 221 AGLDRVNLSIH-----SLDPEKAKMLMGIKDYDLNHVLEMAEALVNAGIDVLIAPVIMFG 275
Query: 247 INDD 250
+NDD
Sbjct: 276 VNDD 279
>gi|302343624|ref|YP_003808153.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075]
gi|301640237|gb|ADK85559.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075]
Length = 365
Score = 36.8 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 6/115 (5%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P E + ++ Y + +VC CRFC G+ G VL
Sbjct: 34 LEAPPHELAVLAHRARLAKNPAMIVTYAVDRNINTTNVCLSGCRFCAFFRPPGAPGGYVL 93
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S ++ + +A ++ GG + +++ + +R IK + H
Sbjct: 94 SPEEIDRKIAETIALGGTQ-ILVQGG---LHPEIGVEETCRQIRRIK--KNFNIH 142
>gi|78484503|ref|YP_390428.1| molybdenum cofactor synthesis-like [Thiomicrospira crunogena XCL-2]
gi|123728093|sp|Q31JB9|MOAA_THICR RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|78362789|gb|ABB40754.1| GTP cyclohydrolase subunit MoaA [Thiomicrospira crunogena XCL-2]
Length = 331
Score = 36.8 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLILS 158
+ C C +C + + G D + I+ + +V TGG+PL+
Sbjct: 18 VTDKCNYRCGYCMPEQGAHPE-GRHTEYLDYDELARIIKAFVDLGVTKVRITGGEPLVR- 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRV 184
K L ++ ++ + ++ + +
Sbjct: 76 -KGLPGFIEEIQPYEGLEEIALSTNA 100
>gi|51891492|ref|YP_074183.1| thiamine biosynthesis protein ThiH [Symbiobacterium thermophilum
IAM 14863]
gi|51855181|dbj|BAD39339.1| thiamine biosynthesis enzyme [Symbiobacterium thermophilum IAM
14863]
Length = 469
Score = 36.8 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 18/189 (9%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILL----KLLHVCPVYCRFCFRREM 117
EE+ L + + I + Y +RI+L + ++C CR+C R
Sbjct: 45 DLEEVADLLMVEDPDHLEALFRTAFEIKQKIYGNRIVLFAPLYVSNLCVNNCRYCGFRRS 104
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK---- 173
+ L+ ++ A + + ++ G DP+ + ++T+ ++
Sbjct: 105 NDQEVRRRLTQEEVAAEVRALIRMGHKRVLLEAGEDPVHCDIDYIVDCIRTIYGVREGKG 164
Query: 174 HVQILRFHSRVPIVDPQR-------INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+++ + + + R +L Q + +P Y +H + P + A
Sbjct: 165 NIRRINVNIAATTTEEYRKLKEAQIGTYQLFQ--ETYHRPTYALMHPSGPKHNYDWHTTA 222
Query: 227 ISRLANAGI 235
R AGI
Sbjct: 223 HDRAMEAGI 231
>gi|308161371|gb|EFO63822.1| RAD50 DNA repair protein, putative [Giardia lamblia P15]
Length = 1382
Score = 36.8 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 20/114 (17%)
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
D + AL I++ I EV + ++ I H + LR + + I+
Sbjct: 1025 DMKKALERIKKSPSITEV----------------ESAESSYQIAHDKTLRLQTILAILKE 1068
Query: 190 QRINPE----LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
I E L+ L + +I E + L N L +
Sbjct: 1069 YAIVDEFLSKLLALLDKVRSQFAESIECICCRELLDVVKRTEDELTNKCPTLGN 1122
>gi|86158252|ref|YP_465037.1| lipoyl synthase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774763|gb|ABC81600.1| lipoic acid synthetase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 326
Score = 36.8 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 61/191 (31%), Gaps = 28/191 (14%)
Query: 98 LLKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
++ + VC CRFC + + L++ E L YI S + + GG
Sbjct: 86 VMLMGDVCTRGCRFCNVKTAAHPPALDPDEPRHLAAAIAELGLDYIVVTSVDRDDLPDGG 145
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
++ L+ I + + + R +P ++ + A V+
Sbjct: 146 ------AAHFADAIRRLKEIPGLLV------EVLTPDFRGDPAAVRTVGRAAPDVFANN- 192
Query: 213 ANHPYEFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ ++++ ++++S ++ G+ + + MR
Sbjct: 193 LETVRRLTPAVRDAKATYDQTLGVLAQMKREFPQVVTKSSIMVGLGEQEAEVVEAMRDLR 252
Query: 263 ELRIKPYYLHH 273
++ L
Sbjct: 253 ANGVEILTLGQ 263
>gi|295697132|ref|YP_003590370.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
gi|295412734|gb|ADG07226.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
Length = 394
Score = 36.8 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C ++C C + + + L + E V+ TGGD
Sbjct: 26 PFLVIWEVTRACSLHCLHCRADAQFRRDPRELSTEEGF-RLLDELAEWKVPL-VVLTGGD 83
Query: 154 PLILSH 159
P
Sbjct: 84 PFERPD 89
>gi|154685272|ref|YP_001420433.1| YfkA [Bacillus amyloliquefaciens FZB42]
gi|154351123|gb|ABS73202.1| YfkA [Bacillus amyloliquefaciens FZB42]
Length = 373
Score = 36.8 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 25/190 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPIDLLLKRLDEI---PLLRSISITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K +++ + L H + +R +IN L + + P +H +
Sbjct: 90 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIGRYERIIPYLDVLHIS 139
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H + + A+ G ++ + + + + RT VE +
Sbjct: 140 HNW-------GTVEDFADIGFAMMEKKPTFEQRARYFDKMIENSRTLVEAGVMVSAETML 192
Query: 275 --DLAAGTSH 282
H
Sbjct: 193 NKRTLPHIEH 202
>gi|238923391|ref|YP_002936907.1| arylsulfatase regulator (Fe-S oxidoreductase) [Eubacterium rectale
ATCC 33656]
gi|238875066|gb|ACR74773.1| arylsulfatase regulator (Fe-S oxidoreductase) [Eubacterium rectale
ATCC 33656]
Length = 456
Score = 36.8 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E + ++S + + AL ++ S EV F GG+PL
Sbjct: 97 LHIAHDCNLACRYCFAEEGEYHGRRALMSYETGKQALDFLIANSGSRRNLEVDFFGGEPL 156
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFH-SRVPIVDPQRINP 194
+ K+L + + H + RF + ++ I
Sbjct: 157 MNWDVVKQLVAYGREQEKL-HDKHFRFTLTTNGVLLNDEIME 197
>gi|311740618|ref|ZP_07714445.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311304138|gb|EFQ80214.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 370
Score = 36.8 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 77/217 (35%), Gaps = 25/217 (11%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + LS ++T + K I +V FTGG+PL+
Sbjct: 52 LTDRCNLRCTYCMPAEGLEWMPTEQTLSDEETIRLIRIGVGKLGIRQVRFTGGEPLLR-- 109
Query: 160 KRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLKEAGK 205
K L+K++ + ++ Q + ++ RIN L +E
Sbjct: 110 KSLEKIIAATKQLRTDQGRSPSTALTTNGLGLEKRAGALAAAGLDRINISLDTIDRERYA 169
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ +H + A AA + +V++ G+N+ E + L V
Sbjct: 170 ALTRRDRLDHVLQAIAAADAAGLH------PIKINAVVMPGVNE--EDIVPLADYAVHHG 221
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
+ ++ L R + + I+ L+ S
Sbjct: 222 AQLRFIEQMPLGPREQWRREDMVTAEDILTRLRTHFS 258
>gi|315652319|ref|ZP_07905311.1| thiamine biosynthesis protein ThiH [Eubacterium saburreum DSM 3986]
gi|315485442|gb|EFU75832.1| thiamine biosynthesis protein ThiH [Eubacterium saburreum DSM 3986]
Length = 482
Score = 36.8 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI++ + C C +C L+ ++ + + +Q+ I
Sbjct: 90 YGNRIVMFAPLYLSNYCVNGCVYCPYHAKNKHIARKKLTQEEIKNEVIALQDMGHKRLAI 149
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR 191
+G DP+ + + + LKT+ IKH ++ + V+ R
Sbjct: 150 ESGEDPINSPIEYILESLKTIYSIKHKNGAIRRANVNIAATTVENYR 196
>gi|91785150|ref|YP_560356.1| tRNA-i(6)A37modification enzyme MiaB [Burkholderia xenovorans
LB400]
gi|123168088|sp|Q13UD5|MIAB_BURXL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|91689104|gb|ABE32304.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia xenovorans
LB400]
Length = 457
Score = 36.8 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 23/133 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203
Query: 154 -----PLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L L + ++ + I ++ +R+ + P+ LI + K
Sbjct: 204 NAYRAGLTLGSTEIADFAQLIEYVADIPGIERIRYTTS----HPKEFTQRLIDTYAKVPK 259
Query: 206 PVYIAIHANHPYE 218
+ H + P +
Sbjct: 260 ---LVSHLHLPVQ 269
>gi|171186113|ref|YP_001795032.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
V24Sta]
gi|170935325|gb|ACB40586.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
Length = 254
Score = 36.8 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 104 VCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C + C C+ R G + ++ L I + +V +GG+PLI
Sbjct: 46 GCNLRCGMCWAWRNTSFVLTAGQWMPPEEVAERLRKIARERGYEQVRISGGEPLIAPRHA 105
Query: 162 LQKVLKTLRY 171
L V+ LR
Sbjct: 106 LA-VIDELRD 114
>gi|20094333|ref|NP_614180.1| thiamine biosynthesis protein ThiH-like protein [Methanopyrus
kandleri AV19]
gi|68565066|sp|Q8TWY4|COFH_METKA RecName: Full=FO synthase subunit 2; AltName:
Full=7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
subunit 2
gi|19887389|gb|AAM02110.1| Predicted enzyme related to thiamine biosynthesis enzyme ThiH
[Methanopyrus kandleri AV19]
Length = 369
Score = 36.8 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 6/73 (8%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+VC CRFC R ++ ++ E A + EV GG +
Sbjct: 67 TNVCINRCRFCAFRRDPDDPDAYRMTPEEVGERAAE--ARDAGATEVCLQGG---LHPEA 121
Query: 161 RLQKVLKTLRYIK 173
+ L+ L IK
Sbjct: 122 TFEYYLEMLDEIK 134
>gi|291550415|emb|CBL26677.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruminococcus torques
L2-14]
Length = 482
Score = 36.4 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 54/129 (41%), Gaps = 26/129 (20%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWE 146
+ +YP + + ++ C +C +C + S++ +A + I+ + E
Sbjct: 183 VERKYPFKSGVNIMFGCNNFCSYC-----IVPYVRGRERSREPKAIIREIERLVADGVVE 237
Query: 147 VIFTGG----------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
V+ G +P+ ++L+ + I+ ++ +RF P+ ++ EL
Sbjct: 238 VMLLGQNVNSYGKNLEEPMT-----FAQLLQEIEKIEGLERIRF----MTSHPKDLSDEL 288
Query: 197 IQCLKEAGK 205
I+ + ++ K
Sbjct: 289 IEVMSKSKK 297
>gi|320335379|ref|YP_004172090.1| molybdenum cofactor biosynthesis protein A [Deinococcus
maricopensis DSM 21211]
gi|319756668|gb|ADV68425.1| molybdenum cofactor biosynthesis protein A [Deinococcus
maricopensis DSM 21211]
Length = 330
Score = 36.4 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 26/173 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ C + C +C RE+ G+ + +L+ ++ E E + + ++ TGG+PL
Sbjct: 18 VTDRCNLRCTYCMPREVFGADYAFLPRAELLTFEEIERLARVFVE-AGVRKLRVTGGEPL 76
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ +L+ L + V+ + + ++ P L L +AG
Sbjct: 77 LRRDLP--DLLERLVRLPGVEDVALTTNGVLL------PRLAGALYQAGLRRVTVSLDAL 128
Query: 212 ------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
N E +A I A AG+ + +V+ +G+NDD L L
Sbjct: 129 DPVVFGQMNGMGTAPEAVLAGIEAAAAAGLRVKVNTVVQRGVNDDQ--LEALW 179
>gi|170693394|ref|ZP_02884553.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia graminis
C4D1M]
gi|170141549|gb|EDT09718.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia graminis
C4D1M]
Length = 461
Score = 36.4 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 47/156 (30%), Gaps = 32/156 (20%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203
Query: 154 -----PLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L + + ++ + I ++ +R+ + P+ LI + K
Sbjct: 204 NAYRGALTVGSSEIADFATLIEYVADIPGIERIRYTTS----HPKEFTQRLIDTYAKVPK 259
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLA---NAGIILL 238
+ H + P R+ G +L
Sbjct: 260 ---LVSHLHLP------VQHGSDRILMAMKRGYTVL 286
>gi|149192272|ref|ZP_01870484.1| hypothetical protein VSAK1_11405 [Vibrio shilonii AK1]
gi|148833887|gb|EDL50912.1| hypothetical protein VSAK1_11405 [Vibrio shilonii AK1]
Length = 474
Score = 36.4 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 73/218 (33%), Gaps = 34/218 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
+ ++ C YC +C G + + + L I + + EV G +
Sbjct: 148 TAFVSIMEGCSKYCTYCVVPYTRGEEVSRPM-----DDVLFEIAQLADQGVREVNLLGQN 202
Query: 154 ------PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRI------NPELIQCL 200
P+ ++L+ + I + +RF + P+ I PEL+ L
Sbjct: 203 VNAYRGPMHDGDICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFL 262
Query: 201 -----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI----NDDP 251
+ + + + + E+ + I +L A + S + G + D
Sbjct: 263 HLPVQSGSDRVLTMMKRPHTAIEY----KSIIRKLRKARPDIQISSDFIVGFPGETDKDF 318
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
+ L++ V+ + ++ P + + + E
Sbjct: 319 QDTMKLIKD-VDFDMSFSFIFSPRPGTPAADYPCDLPE 355
>gi|282857132|ref|ZP_06266378.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282585067|gb|EFB90389.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 436
Score = 36.4 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 10/116 (8%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R +K+ C C +C + G + D A Q E+I TG
Sbjct: 150 YFGRAFVKVQDGCDHRCTYCIVPVLRGPSVSRPV--ADILAEARRCAAAGQF-ELILTGV 206
Query: 153 D-PLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L + +++ L ++ +Q LRF S ++P I +L++ L ++ +
Sbjct: 207 HLGLFGRDSGESFAALVRALDSVEGIQRLRFGS----LEPFSIGDDLLEALAQSPR 258
>gi|258404284|ref|YP_003197026.1| MiaB-like tRNA modifying enzyme YliG [Desulfohalobium retbaense DSM
5692]
gi|257796511|gb|ACV67448.1| MiaB-like tRNA modifying enzyme YliG [Desulfohalobium retbaense DSM
5692]
Length = 438
Score = 36.4 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 73/203 (35%), Gaps = 35/203 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
P LK+ C CRFC + Q L S+ E + E++
Sbjct: 138 PASAYLKISEGCDHACRFC-----IIPQLRGPLQSRPVEELVREAGSLVDQGARELVLVA 192
Query: 152 GDP------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D L + + LQ++++ L + + +R + P + EL++ L+++
Sbjct: 193 QDVSNYGQDLGMR-QGLQRLVEALSAVPGLDWIRL----LYLYPVGVTTELLRFLRDSAP 247
Query: 206 PVY----IAIHANHPYEFSEEAIAAIS---RLANAGIILLSQ----SVLLKGINDDPEIL 254
V I + HP ++ R+ +L Q + L+ G + E
Sbjct: 248 LVVPSFDIPLQHAHPDILTQMGRPFARDPYRVIATVRDVLPQAALRTSLIVGYPGEKEAH 307
Query: 255 ANLMRTFVE------LRIKPYYL 271
+R FV+ L + PYY
Sbjct: 308 FAYLRQFVQEVRFHNLGVFPYYA 330
>gi|78222909|ref|YP_384656.1| cobalamin B12-binding/radical SAM family protein [Geobacter
metallireducens GS-15]
gi|78194164|gb|ABB31931.1| Cobalamin B12-binding/Radical SAM [Geobacter metallireducens GS-15]
Length = 434
Score = 36.4 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 51/254 (20%), Positives = 90/254 (35%), Gaps = 40/254 (15%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
P+ R IP + L I P R D + +Y ++ CP C FC
Sbjct: 132 PLYRAPIPTDDRLVI-PWSRRDILA----------GRQYLTTQTVQASRGCPYDCPFCT- 179
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRY 171
V G ++ + LA ++ V GDP + + L+ +
Sbjct: 180 ---VTPYFGRTFRYRNPDDVLAELRSFEGKLMVFVDDNILGDP-VRAKPILEGMAGM--- 232
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-------IHANHPYEFSEEAI 224
LR+ + + + +PEL++ + +G HANH + +
Sbjct: 233 -----NLRWGGQANLRFAE--DPELVKLVARSGCIGIFVGIESVTGPHANHAKTGNGSSQ 285
Query: 225 -AAISRLANAGIILLSQSVLLKGINDDPE-ILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ R+ +AGI+L + ++ G +D E I +R E + GTS
Sbjct: 286 IDLVKRVRDAGIVLE--ASMIFGFDDHDEGIFERTVRFLEECAPSIPTFNVLTPYPGTSL 343
Query: 283 FRLTIEEGQKIVAS 296
F+ EG+ +
Sbjct: 344 FKQFDREGRLLHKD 357
>gi|218777874|ref|YP_002429192.1| glycosyl transferase family 2 [Desulfatibacillum alkenivorans
AK-01]
gi|218759258|gb|ACL01724.1| glycosyl transferase family 2 [Desulfatibacillum alkenivorans
AK-01]
Length = 724
Score = 36.4 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + +K + C + CR C + +K L + A+ + + + GG+
Sbjct: 404 PRIVSMKFTNNCQLKCRMC---GIWSQEKEAELPGEQWRKAIDKVFHWLGPYRLDIAGGE 460
Query: 154 PLILSH-KRLQKVLKTL 169
PL+ L L
Sbjct: 461 PLLRPDNDELTAYASAL 477
>gi|281412936|ref|YP_003347015.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
gi|281374039|gb|ADA67601.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
Length = 348
Score = 36.4 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 40/115 (34%), Gaps = 6/115 (5%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPD-----RILLKLLHVCPVYCRFCFRREM 117
+E L + + I +Y R +++ +VC C +C R
Sbjct: 16 TREVLKEALSINDREFNEALFKLADEIRRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRD 75
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ K ++ ++ + V+ +G DP + + +++ ++ +
Sbjct: 76 NKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPYYMPD-VISDIVREIKKM 129
>gi|229829112|ref|ZP_04455181.1| hypothetical protein GCWU000342_01197 [Shuttleworthia satelles DSM
14600]
gi|229792275|gb|EEP28389.1| hypothetical protein GCWU000342_01197 [Shuttleworthia satelles DSM
14600]
Length = 449
Score = 36.4 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 71/183 (38%), Gaps = 26/183 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP-L 155
LK+ C +C +C ++ GS +V K + A + + + E+I + L
Sbjct: 149 AYLKIAEGCDKHCSYCIIPKLRGSY-RSVPMIKLIKEARELVSQ--GVRELILVAQETTL 205
Query: 156 ILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
S K L ++L L I+ ++ +R P+ I+ ELIQ + K + YI
Sbjct: 206 YGSDLYGRKMLPELLDKLNDIEGLRWIRI----LYAYPEEIDQELIQAMVRNDKVLHYID 261
Query: 211 IHANHP-YEF---------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
+ H E ++ ++ L A + ++ ++ G P + +
Sbjct: 262 MPIQHGDDEILRRMGRRTNQDDIRKKVAMLREAMPDIAIRTTVICGF---PGETDQMHQN 318
Query: 261 FVE 263
++
Sbjct: 319 LLD 321
>gi|261368422|ref|ZP_05981305.1| radical SAM domain protein [Subdoligranulum variabile DSM 15176]
gi|282569543|gb|EFB75078.1| radical SAM domain protein [Subdoligranulum variabile DSM 15176]
Length = 484
Score = 36.4 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + + ++S + + AL ++ S EV F GG+PL
Sbjct: 104 LHVAHTCNLNCSYCFAAQGKFHGEAGLMSFETGKQALDFLVAHSGTRRNLEVDFFGGEPL 163
Query: 156 I 156
+
Sbjct: 164 M 164
>gi|72161752|ref|YP_289409.1| molybdenum cofactor biosynthesis protein A [Thermobifida fusca YX]
gi|71915484|gb|AAZ55386.1| GTP cyclohydrolase subunit MoaA [Thermobifida fusca YX]
Length = 329
Score = 36.4 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 5/100 (5%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + +L+ + + + I EV FTGG+PL+
Sbjct: 17 LTDRCNLRCTYCMPPEGLDWLPTPELLTDDEVIRLIRIGVTQLGIREVRFTGGEPLLR-- 74
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ L ++ + + + + RI P L +
Sbjct: 75 RGLPSIVAATAALDPRPRIALTTNGIGL--NRIAPTLAEA 112
>gi|307243292|ref|ZP_07525459.1| MiaB-like protein [Peptostreptococcus stomatis DSM 17678]
gi|306493310|gb|EFM65296.1| MiaB-like protein [Peptostreptococcus stomatis DSM 17678]
Length = 431
Score = 36.4 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 21/145 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
R +K+ C YC +C + + S+D ++ + I+ + EV+ T
Sbjct: 141 KTRAFIKIQDGCDRYCSYC-----IIPYARGRIRSRDRQSIIEEIEKLAANGYKEVVLTG 195
Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D + + V+K + ++ ++ +R S V+P + I + +
Sbjct: 196 IHVASYGRD--LDEDIDILTVIKDVNKVEGIERIRLSS----VEPVLFTEDFIDQISKID 249
Query: 205 KPVYIAIHANHPYEFSEEAIAAISR 229
K + H + R
Sbjct: 250 K-LVPHYHLSLQSGCDATLKRMNRR 273
>gi|148642445|ref|YP_001272958.1| anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
elongator protein [Methanobrevibacter smithii ATCC
35061]
gi|148551462|gb|ABQ86590.1| anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase,
Elongator protein 3/MiaB/NifB family [Methanobrevibacter
smithii ATCC 35061]
Length = 474
Score = 36.4 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 57/149 (38%), Gaps = 11/149 (7%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ++L+ LP + + + L H + CP+ C FC M G +
Sbjct: 164 PLIQDLDELPFPALNLLPMKKYRLLDMDTH----MTTMITTRGCPMQCSFCSSAAMHGKK 219
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S ++ + Y++ I + F D L +++ + + ++++I+
Sbjct: 220 IRER-SVENIVDEIEYLKTNYDIDTIAFMD-DTFTLKKRKVMAICDEILK-RNIEIMWGC 276
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ ++ +L++ +KEAG
Sbjct: 277 TSRV----DTLDEKLLKKMKEAGCITIFI 301
>gi|18312034|ref|NP_558701.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str.
IM2]
gi|18159459|gb|AAL62883.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str.
IM2]
Length = 372
Score = 36.4 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD---TEAALAYIQEKSQIWEV 147
H P + + CP+ C+ C ++ G + + + E + K +
Sbjct: 12 HEAPLLVFWESTKACPLACKHCRADAILKPLPGELTTQEGKRLIEQVAEFGDPKPLL--- 68
Query: 148 IFTGGDPLILSH 159
I TGGDPL+ S
Sbjct: 69 IITGGDPLMRSD 80
>gi|222446056|ref|ZP_03608571.1| hypothetical protein METSMIALI_01705 [Methanobrevibacter smithii
DSM 2375]
gi|261349405|ref|ZP_05974822.1| magnesium-protoporphyrin IX monomethyl ester cyclase
[Methanobrevibacter smithii DSM 2374]
gi|222435621|gb|EEE42786.1| hypothetical protein METSMIALI_01705 [Methanobrevibacter smithii
DSM 2375]
gi|288861768|gb|EFC94066.1| magnesium-protoporphyrin IX monomethyl ester cyclase
[Methanobrevibacter smithii DSM 2374]
Length = 474
Score = 36.4 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 57/149 (38%), Gaps = 11/149 (7%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P ++L+ LP + + + L H + CP+ C FC M G +
Sbjct: 164 PLIQDLDELPFPALNLLPMKKYRLLDMDTH----MTTMITTRGCPMQCSFCSSAAMHGKK 219
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S ++ + Y++ I + F D L +++ + + ++++I+
Sbjct: 220 IRER-SVENIVDEIEYLKTNYDIDTIAFMD-DTFTLKKRKVMAICDEILK-RNIEIMWGC 276
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ ++ +L++ +KEAG
Sbjct: 277 TSRV----DTLDEKLLKKMKEAGCITIFI 301
>gi|218264182|ref|ZP_03478066.1| hypothetical protein PRABACTJOHN_03756 [Parabacteroides johnsonii
DSM 18315]
gi|218222228|gb|EEC94878.1| hypothetical protein PRABACTJOHN_03756 [Parabacteroides johnsonii
DSM 18315]
Length = 293
Score = 36.4 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 9/129 (6%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+++ + + + C C FC K +++S + + ++ QI E+ F+GG+P
Sbjct: 7 NKLRILVTNKCNYQCPFCHNEGQEKGVKFSMMSFDSFKMLIDFL-NDQQISEINFSGGEP 65
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ +++K + Y + I E I LK I
Sbjct: 66 FLHK-----EIVKMICYADQHMKCDISCATNLSL---ITDEQIDILKGTRVKFNIQFPFI 117
Query: 215 HPYEFSEEA 223
EFS+
Sbjct: 118 SEKEFSKST 126
>gi|189201956|ref|XP_001937314.1| C6 zinc finger domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187984413|gb|EDU49901.1| C6 zinc finger domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 663
Score = 36.4 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 28/237 (11%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P++E ++ + + + +G HR + L C F RE
Sbjct: 177 VLPRQEMAHMSNVGIGHVLLEESVRVRQGYDHRENPTHMSVLTSYFYHGCYFGLARE--- 233
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ T L T+A L + + DPL +S KR+ L + +
Sbjct: 234 NTAWTYLREATTQAQL------LGMHDEETYKHDPLDVSRKRVLYWLLFIAE----RTYA 283
Query: 180 FHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL----ANAG 234
H R PI I P L + + V + + N + I +R+ A+A
Sbjct: 284 LHKRRPITLHPTIHTPSLDEVPSDRPIAVGLELMINMFKIIDDNFINLWNRVHNTHASAA 343
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
I Q+ L + + E V++RI ++L + ++L++ +G
Sbjct: 344 WIAQVQTQLSEAVPAYFECTEA---QEVQIRITQHWL-------RSQAWQLSVSQGL 390
>gi|52143547|ref|YP_083282.1| coenzyme PQQ synthesis protein [Bacillus cereus E33L]
gi|51977016|gb|AAU18566.1| coenzyme PQQ synthesis protein [Bacillus cereus E33L]
Length = 342
Score = 36.4 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 23/204 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E ++FTGGD
Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPM-LVFTGGD 66
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-----GKPVY 208
PL+ + K V++ S P V + I L G
Sbjct: 67 PLMRPDV---YDIAEYAVKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGPTAE 123
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
I H + + AI L I + +V+ D E +A L+
Sbjct: 124 IHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEEL------- 176
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQK 292
+ + F + I G++
Sbjct: 177 ------ECVLWSIFFLVPIGRGKE 194
>gi|302670644|ref|YP_003830604.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316]
gi|302395117|gb|ADL34022.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316]
Length = 451
Score = 36.4 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 64/205 (31%), Gaps = 29/205 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI------WEVIFT 150
LK+ C +C +C ++ G+ + + A + E E
Sbjct: 150 NYLKIAEGCDKHCTYCIIPKVRGAY--RSVPMEQLLADARNLAEAGVTELLLVAQETTLY 207
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-----EAGK 205
G D + K+L ++L L I + +R P+ I ELIQ +K
Sbjct: 208 GTD--LYGEKKLPELLHKLCEIDGFKWIRI----LYCYPEEITEELIQTIKTEPKICHYL 261
Query: 206 PVYIAIHANHPYEF------SEEAIAAISRLANAGIILLSQSVLLKGI----NDDPEILA 255
+ I ++ + + E A + L + ++ L+ G D
Sbjct: 262 DIPIQSGSDRILKLMGRRTNNAEIRALVEHLREEIPDICIRTTLISGFPGETAADHNETF 321
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGT 280
L+ R+ + +
Sbjct: 322 KLVEDLRFDRLGVFTYSQEEDTPAA 346
>gi|302389750|ref|YP_003825571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermosediminibacter
oceani DSM 16646]
gi|302200378|gb|ADL07948.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermosediminibacter
oceani DSM 16646]
Length = 439
Score = 36.4 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 46/116 (39%), Gaps = 14/116 (12%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIF 149
+ + + + C +C +C + G +K + +D + + + V
Sbjct: 148 KAWVTITYGCNNFCTYCIVPYVRGREKSR--NPEDIVREVEELAKQGFKEINLLGQNVNS 205
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + ++L+ L I ++ +RF + P+ ++ ELI +++ K
Sbjct: 206 YGKD--LGGAVTFPELLRRLNDIDGIERIRFTTS----HPKDLSDELIYAMRDCKK 255
>gi|213158400|ref|YP_002319698.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB0057]
gi|215483142|ref|YP_002325349.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB307-0294]
gi|301345476|ref|ZP_07226217.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB056]
gi|301510810|ref|ZP_07236047.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB058]
gi|301595060|ref|ZP_07240068.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB059]
gi|332852472|ref|ZP_08434211.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
6013150]
gi|332871325|ref|ZP_08439874.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
6013113]
gi|213057560|gb|ACJ42462.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB0057]
gi|213988902|gb|ACJ59201.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB307-0294]
gi|332729174|gb|EGJ60517.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
6013150]
gi|332731609|gb|EGJ62895.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
6013113]
Length = 343
Score = 36.4 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 64/179 (35%), Gaps = 23/179 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R ++ + + C C +C K +LS + +++ + I + TG
Sbjct: 19 RIKRKLRISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQ-QGIESIRITG 77
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFH--------SRVPIVDPQRINPELIQCLKEA 203
G+PL+ + + ++ L+ +K + + R ++ +L L ++
Sbjct: 78 GEPLMR--QGIVHFVRDLQALKALGLKRISMTTNGHYLAKYAQQLKDAGLDDLNISL-DS 134
Query: 204 GKPVYIAIHANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
P+ E + E + I +AG+ VL+K NDD +
Sbjct: 135 LDPIQF-------KELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDDQILPMVKW 186
>gi|325122551|gb|ADY82074.1| molybdopterin biosynthesis, protein A [Acinetobacter calcoaceticus
PHEA-2]
Length = 346
Score = 36.4 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 63/171 (36%), Gaps = 23/171 (13%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R ++ + + C C +C K +LS + +++ + I + TG
Sbjct: 22 RIKRKLRISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQ-QGIESIRITG 80
Query: 152 GDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIV------DPQRINPELIQCLKEA 203
G+PL+ + + ++ L+ +K ++ + + + +L L ++
Sbjct: 81 GEPLMR--QGIVYFVRDLQALKVLGLKRISMTTNGHYLAKYAKQLKDAGLDDLNISL-DS 137
Query: 204 GKPVYIAIHANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
PV E + E + I +AG+ VL+K NDD
Sbjct: 138 LDPVQF-------KELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKNKNDD 181
>gi|156741565|ref|YP_001431694.1| radical SAM domain-containing protein [Roseiflexus castenholzii DSM
13941]
gi|156232893|gb|ABU57676.1| Radical SAM domain protein [Roseiflexus castenholzii DSM 13941]
Length = 364
Score = 36.4 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 10/83 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----VIF 149
P I ++ C + CR C M + E ++ ++++ +I
Sbjct: 22 PLNIYWEMTQACALACRHCRAEAMPQPHPLQLT----FEESVRFLRQIPDFGNPLPQLIL 77
Query: 150 TGGDPLILSHKRLQKVLKTLRYI 172
TGGDPL L ++ R +
Sbjct: 78 TGGDPLARPD--LLDLIDAARAL 98
>gi|256828582|ref|YP_003157310.1| thiazole biosynthesis protein ThiH [Desulfomicrobium baculatum DSM
4028]
gi|256577758|gb|ACU88894.1| thiazole biosynthesis protein ThiH [Desulfomicrobium baculatum DSM
4028]
Length = 370
Score = 36.4 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 79/240 (32%), Gaps = 39/240 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C +CR+C + T LS + A I ++ TG P
Sbjct: 78 LYVSNHCANHCRYCG-FAAPNTIPRTQLSLDEVRAEGQAIAATGLKHLLLLTGEAPRKAG 136
Query: 159 HKRLQKVLKTLRYI-KHV-------------QILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ L+ ++ LR + + ++++ V + +P L L AG
Sbjct: 137 VEYLEACVRVLRPLFPSISLEVYPMETADYARLVQAGVDGLTVFQETYDPVLYAQLHPAG 196
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
A N P R A AG+ +++ LL + EI A
Sbjct: 197 PKRDYAFRLNTP-----------QRGAEAGMRVVNIGALLGLTDWRQEIYAT---GLHAA 242
Query: 265 RIKPYY------LHHPDLAAGTSHFR----LTIEEGQKIVASLKEKISGLCQPFYILDLP 314
++ Y + P + F+ ++ E + + +L+ + L + P
Sbjct: 243 WLQKRYPGVDVAVSLPRMRPHAGAFQPACIVSDRELVQAMTALRIFLPRLSITISTREAP 302
>gi|255693887|ref|ZP_05417562.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
gi|260620292|gb|EEX43163.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
Length = 434
Score = 36.4 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 65/201 (32%), Gaps = 33/201 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEV 147
LK+ C C +C + G + + + Y+ + E+
Sbjct: 135 RHYAYLKISEGCDRKCSYCAIPIITGRHISKPI--DEILDEVRYLVSQGVKEFQVIAQEL 192
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 193 TYYGVD--LYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDNVC 246
Query: 208 -YIAIHANHP---------YEFSEE-AIAAISRLANA--GIILLSQSVLLKGINDDPEIL 254
Y+ I H + ++E I + GI L + ++++ + E
Sbjct: 247 KYMDIALQHISDKMLRLMRRQVTKEDTYKLIEQFRKEVPGIHLRT-TLMVGHPGETEEDF 305
Query: 255 ANLMR-----TFVELRIKPYY 270
L F + Y
Sbjct: 306 EELKEFVRKVRFDRMGAFAYS 326
>gi|225175074|ref|ZP_03729070.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
1]
gi|225169250|gb|EEG78048.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
1]
Length = 431
Score = 36.4 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 13/149 (8%)
Query: 63 QKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
+E P + + R LK+ C +C +C G
Sbjct: 108 LVQEAKKGRLNCVAPWEEKQGFEAMPASQSGERTRAFLKVQEGCRQFCSYCIVPYARGPL 167
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQ 176
EA + E++ +G L +++ L I+ ++
Sbjct: 168 HSRPPEDAAAEAER---LAEQGFSEMVLSGVHLGSYGEDLPGELALSDLIRELVTIEKIR 224
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+R S ++P I P+LI+ L + K
Sbjct: 225 RIRISS----IEPTEITPDLIEVLLDYPK 249
>gi|125625194|ref|YP_001033677.1| hypothetical protein llmg_2436 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124494002|emb|CAL99000.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 275
Score = 36.4 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM +S +D E Y+++ V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKE-ISKEDLEKIAYYLEKYKVPL-VAICGGD 67
Query: 154 PLILS 158
P++
Sbjct: 68 PILHP 72
>gi|295094228|emb|CBK83319.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Coprococcus sp.
ART55/1]
Length = 454
Score = 36.4 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E ++S + + +L ++ S + EV F GG+PL
Sbjct: 96 LHIAHDCNLACRYCFAGEGEYKGDRALMSLEVAKKSLDFLVANSGLRRNLEVDFFGGEPL 155
Query: 156 I 156
+
Sbjct: 156 M 156
>gi|115376179|ref|ZP_01463422.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115366829|gb|EAU65821.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 441
Score = 36.4 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 28/214 (13%), Positives = 73/214 (34%), Gaps = 36/214 (16%)
Query: 92 RYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
+Y R + + C C++C V + ++ + + AL + +
Sbjct: 46 KYRTRAEQLAAFTGLHIFVVTLRCDHSCQYCQVSRQVEDRARFDMTREHADRALDLVFQS 105
Query: 142 SQIW-EVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPEL 196
++ F GG+PL L+ ++ V++ + + + R++ E+
Sbjct: 106 PSPALKIEFQGGEPL-LNFGLIRHVVERALTLNQPLGRDLQFVIATNLS-----RLSEEM 159
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAI---------AAISRLANAGIILLSQ--SVLLK 245
+ K+ G ++++ + P + + A L Q S L+
Sbjct: 160 LAFCKQHG--IFLSTSLDGPEALHNAQRPVRGGNSHQRTVEGIRRAREALGDQAVSALMT 217
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ + ++ +V L + + +L+
Sbjct: 218 TTRTSLDRVEEIIDEYVHLG--FHSVFLRNLSPY 249
>gi|332879119|ref|ZP_08446820.1| radical SAM domain protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332682919|gb|EGJ55815.1| radical SAM domain protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 210
Score = 36.4 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 93 YPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
Y + L C V C +C +E ++ ++ +D A + +I TG
Sbjct: 31 YKGSAAYFIRLGGCDVGCHWCDVKESWAAEAHPIVPVEDIAA-----EALKHSRLIIITG 85
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQI 177
G+PL+ + +L +L+ H++
Sbjct: 86 GEPLMWNLDKLTALLREGGARTHIET 111
>gi|330996164|ref|ZP_08320054.1| iron-only hydrogenase maturation rSAM protein HydG [Paraprevotella
xylaniphila YIT 11841]
gi|329573668|gb|EGG55259.1| iron-only hydrogenase maturation rSAM protein HydG [Paraprevotella
xylaniphila YIT 11841]
Length = 475
Score = 36.4 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 93/280 (33%), Gaps = 42/280 (15%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSS 128
++D + Y +RI++ + C C +C + L+
Sbjct: 63 GQQDLTEEMFALARDIKQRFYGNRIVMFAPLYLSNYCVNGCVYCPYHAKNKMIRRRKLTQ 122
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRV 184
++ + +Q+ + TG DP + + + ++T+ IKH ++ + +
Sbjct: 123 EEIRREVIALQDMGHKRLALETGEDPRNNPIEYVLESIRTIYGIKHKNGAIRRVNVNIAA 182
Query: 185 PIVDPQR-------INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR-----LAN 232
V+ R L Q + + Y A+H P A+ R + +
Sbjct: 183 TTVENYRRLKDAGIGTYILFQ--ETYNRTNYEALHPTGPKSDYAYHTEAMDRAMLGGIDD 240
Query: 233 AGIILLSQSVLLKGINDDPEILANLM----RTFVELRIKPYYLHHPDLAAG----TSHFR 284
GI +L G+ L+ + P+ + P L T+ F+
Sbjct: 241 VGIGVLF------GLETYRYDFIGLLMHAEHLEARFGVGPHTISVPRLCPADDIDTADFK 294
Query: 285 --LTIEEGQKIVASLKEKIS--GLCQPFYILDLPGGYGKV 320
+ E KIVA L+ + G+ + P KV
Sbjct: 295 NCVPDEVFHKIVAVLRIAVPYTGMIVST--RETPASREKV 332
>gi|149919125|ref|ZP_01907609.1| hypothetical protein PPSIR1_35157 [Plesiocystis pacifica SIR-1]
gi|149820055|gb|EDM79476.1| hypothetical protein PPSIR1_35157 [Plesiocystis pacifica SIR-1]
Length = 261
Score = 36.4 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
Query: 96 RILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R + C + C +C R + +A + + Q V+ TGG+P
Sbjct: 37 RSSFVRVSGCNLRCVWCDTPRTSWAPEGE----RASLDALVDWCGAPGQPRHVVLTGGEP 92
Query: 155 LILSHKRLQKVLKTLRYIKH 174
L+ ++ LR H
Sbjct: 93 LLFPAC--AELSARLRAAGH 110
>gi|319902104|ref|YP_004161832.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides
helcogenes P 36-108]
gi|319417135|gb|ADV44246.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides
helcogenes P 36-108]
Length = 432
Score = 36.4 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 65/199 (32%), Gaps = 35/199 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGKHVSR--PMEEILDEVKYLVAEGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + + L ++++ + I V+ +R H P EL + ++E Y+
Sbjct: 196 GVD--LYKKQMLPELIEHISEIPGVEWIRLH----YAYPAHFPMELFRVMRERSNVCKYM 249
Query: 210 AIHANHP---------YEFS-EEAIAAISRLANA--GIILLSQSVLLKGI----NDDPEI 253
I H + E I + N GI L + L+ G D E
Sbjct: 250 DIALQHISDNMLMRMRRHVTKAETYQLIEKFRNEVPGIHLR--TTLMVGYPGETEADFEE 307
Query: 254 LANLMRT--FVELRIKPYY 270
L + + F + Y
Sbjct: 308 LKDFVHKVRFDRMGAFAYS 326
>gi|320108498|ref|YP_004184088.1| Radical SAM domain-containing protein [Terriglobus saanensis
SP1PR4]
gi|319927019|gb|ADV84094.1| Radical SAM domain protein [Terriglobus saanensis SP1PR4]
Length = 352
Score = 36.4 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+P + + C + C +C ++ E + ++ + +GG
Sbjct: 43 HPYMAHIVPMRRCNLACTYCNE----YDDHSDPTPIEEMERRIDHLGR-LGTSVITISGG 97
Query: 153 DPLILSHKRLQKVLKTLRY 171
+PL+ L +V+ +R
Sbjct: 98 EPLLHPD--LDRVIARIRK 114
>gi|225389119|ref|ZP_03758843.1| hypothetical protein CLOSTASPAR_02865 [Clostridium asparagiforme
DSM 15981]
gi|225044818|gb|EEG55064.1| hypothetical protein CLOSTASPAR_02865 [Clostridium asparagiforme
DSM 15981]
Length = 378
Score = 36.4 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 52/127 (40%), Gaps = 22/127 (17%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ +YP + + ++ C +C +C + G ++ ++ + + + E++
Sbjct: 191 VERKYPFKSGVNIIFGCNNFCSYCIVPYVRGRERSRRP--EEILKEVKRLAADGVV-EIM 247
Query: 149 FTGG----------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
G +P+ ++L+ + I ++ +RF P+ ++ ELI+
Sbjct: 248 LLGQNVNSYGKNLEEPMT-----FAQLLREVEKIDGIERIRF----MTSHPKDLSDELIE 298
Query: 199 CLKEAGK 205
+ ++ K
Sbjct: 299 VMSQSKK 305
>gi|160940457|ref|ZP_02087802.1| hypothetical protein CLOBOL_05347 [Clostridium bolteae ATCC
BAA-613]
gi|158437037|gb|EDP14804.1| hypothetical protein CLOBOL_05347 [Clostridium bolteae ATCC
BAA-613]
Length = 473
Score = 36.4 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L L + C C +C L+ + + +Q+ + TG DP+
Sbjct: 91 LYLSNYCINGCVYCPYHAKNKHIPRKKLTQDEIRREVMALQDMGHKRLALETGEDPVHNP 150
Query: 159 HKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR 191
+ + + + T+ IKH ++ + + V+ R
Sbjct: 151 IEYMLESIDTIYSIKHKNGAIRRVNVNIAATTVENYR 187
>gi|282878779|ref|ZP_06287547.1| translation initiation factor IF-1 [Prevotella buccalis ATCC 35310]
gi|282880979|ref|ZP_06289670.1| translation initiation factor IF-1 [Prevotella timonensis CRIS
5C-B1]
gi|281299170|gb|EFA91571.1| translation initiation factor IF-1 [Prevotella buccalis ATCC 35310]
gi|281305202|gb|EFA97271.1| translation initiation factor IF-1 [Prevotella timonensis CRIS
5C-B1]
Length = 72
Score = 36.4 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
FR+ +E G +I+ ISG + YI LPG KV++ +++ G
Sbjct: 22 FRVELENGVEII----AHISGKMRMHYIKILPGDKVKVEMSPYDL---TKGRIVFRY 71
>gi|297190540|ref|ZP_06907938.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197717854|gb|EDY61762.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 297
Score = 36.4 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 7/104 (6%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTG-GDPLILS 158
L C C +C + S++ E + ++ V+FT G+ L+ S
Sbjct: 14 PLSSCDYDCPYCPFAKRRDSREQLRADRAALERFAGWAAAQTGDRLSVLFTPWGEGLVRS 73
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQRINPELIQC 199
R + L L ++ H++ + + + + L
Sbjct: 74 WYR--RTLTELSHLPHIRRVAIQTNLSCRTDWLAEASTETLALW 115
>gi|283797908|ref|ZP_06347061.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
gi|291074375|gb|EFE11739.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
gi|295091886|emb|CBK77993.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium cf.
saccharolyticum K10]
Length = 483
Score = 36.4 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 70 LPEEREDPIGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ I + ++ + +YP + + ++ C +C +C + G ++
Sbjct: 163 HTGKMVIDIWKDTDKIVEDLPSERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSRRP- 221
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGG----------DPLILSHKRLQKVLKTLRYIKHVQI 177
+D + + + EV+ G +P+ ++L+ + I+ ++
Sbjct: 222 -EDIIKEIEGLVADGVV-EVMLLGQNVNSYGKNLPEPIT-----FAELLRRVEQIEGLER 274
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK 205
+RF P+ ++ ELI+ ++++ K
Sbjct: 275 IRF----MTSHPKDLSDELIEVMRDSKK 298
>gi|253568256|ref|ZP_04845667.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251842329|gb|EES70409.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 306
Score = 36.4 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 15/126 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G S ++ + Y+ + E+ +
Sbjct: 8 AYLKISEGCDRKCSYCAIPIITGRHISK--SMEEILDEVRYLVSQGVKEFQVIAQELTYY 65
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + + L ++++ + I V+ +R H P +L + ++E Y+
Sbjct: 66 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDNVCKYM 119
Query: 210 AIHANH 215
I H
Sbjct: 120 DIALQH 125
>gi|169795655|ref|YP_001713448.1| molybdopterin biosynthesis, protein A [Acinetobacter baumannii AYE]
gi|169148582|emb|CAM86448.1| molybdopterin biosynthesis, protein A [Acinetobacter baumannii AYE]
Length = 346
Score = 36.4 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 64/179 (35%), Gaps = 23/179 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R ++ + + C C +C K +LS + +++ + I + TG
Sbjct: 22 RIKRKLRISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQ-QGIESIRITG 80
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFH--------SRVPIVDPQRINPELIQCLKEA 203
G+PL+ + + ++ L+ +K + + R ++ +L L ++
Sbjct: 81 GEPLMR--QGIVHFVRDLQALKALGLKRISMTTNGHYLAKYAQQLKDAGLDDLNISL-DS 137
Query: 204 GKPVYIAIHANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
P+ E + E + I +AG+ VL+K NDD +
Sbjct: 138 LDPIQF-------KELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDDQILPMVKW 189
>gi|126660238|ref|ZP_01731354.1| molybdenum cofactor biosynthesis protein A [Cyanothece sp. CCY0110]
gi|126618477|gb|EAZ89230.1| molybdenum cofactor biosynthesis protein A [Cyanothece sp. CCY0110]
Length = 247
Score = 36.4 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
P RI ++L + C +C FC+ + + + + +I+ KS V F G
Sbjct: 3 PQRISIELTNQCSKHCHFCYNHSHHLGE-----TRWQADELVDFIKDCAKSGTKAVSFGG 57
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+PL + L +VL L+ + + R + + + +L+ V+++I
Sbjct: 58 GEPLEYPN--LFEVLSELQGV----LFRSITSNGLHLHGDLLEKLVI---ANPDKVHLSI 108
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
H E + R +++Q LL +
Sbjct: 109 HY-------PEQKEEVKR-------VINQVKLLDSL 130
>gi|237809432|ref|YP_002893872.1| cytoplasmic asparaginase I [Tolumonas auensis DSM 9187]
gi|237501693|gb|ACQ94286.1| L-asparaginase, type I [Tolumonas auensis DSM 9187]
Length = 335
Score = 36.4 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 47/126 (37%), Gaps = 11/126 (8%)
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGIILLSQS 241
V + P + L++ K + + + N P + + + + G+I+++ S
Sbjct: 213 VVTLYPGIAVDVIANILQQPVKALILLTYGVGNAPQ--NPAMLRLLREASARGVIIVNLS 270
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF----RLTIEEGQKIVAS- 296
L+G + + + Y + A HF L+ E+ + ++
Sbjct: 271 QCLRGKVNMGGYATG--NALADAGVLSGYDMTTEAALAKLHFLLSQDLSSEQIRTLMQQD 328
Query: 297 LKEKIS 302
L+ ++S
Sbjct: 329 LRGELS 334
>gi|218778532|ref|YP_002429850.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218759916|gb|ACL02382.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 236
Score = 36.4 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 19/147 (12%)
Query: 104 VCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPLILS--- 158
C + C +C E+V G Q +S ++ L I+ ++ V FTGG+P +
Sbjct: 31 FCNLRCPWCNAAELVVGPQTKETISPEELFDELQTIKNKHPELKAVCFTGGEPTMHRGLP 90
Query: 159 -------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
L+ ++T H+ + + RI +L L++ + +
Sbjct: 91 DLLRRVCDMGLETCVETNGTQPHLLDYVINDGIL----NRILFDLKAPLEDEPYSIAAGV 146
Query: 212 HANHPYEFSEEAIAAISRLANAGIILL 238
P +E++ I ++ G IL
Sbjct: 147 PI--PASIIKESLIIIKKM-ETGRILR 170
>gi|239826837|ref|YP_002949461.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. WCH70]
gi|239807130|gb|ACS24195.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. WCH70]
Length = 340
Score = 36.4 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 79/212 (37%), Gaps = 16/212 (7%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C E+ G + +L+ ++ E + ++ TGG+PL
Sbjct: 23 VIDQCNFRCVYCMPAEIFGPNFRFLREDELLTIEEMVLLAESFAE-LGVEKIRITGGEPL 81
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVP--IVDPQRINPELIQCLKEAGKPV--YIAI 211
+ +++ L +I ++ + + + +R+ ++ + + + +
Sbjct: 82 LRRDLD--LLVERLAHISGIRDIALTTNGIHLVKWAKRLKEAGLKRVNVSLDALDDEVFK 139
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
N + + I AG+ + V+ KG+ND I E I ++
Sbjct: 140 KMNGVGVGVKPVLKGIEAAREAGLGVKVNMVVKKGMNDSQIIPMANYFK--ERGIALRFI 197
Query: 272 HHPDLAAGTSHFRLT-IEEGQKIVASLKEKIS 302
+ D T+ + + + +++ L++
Sbjct: 198 EYMD-VGTTNGWDFSHVVTKKEMYERLQQMHP 228
>gi|307594460|ref|YP_003900777.1| Radical SAM domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307549661|gb|ADN49726.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429]
Length = 372
Score = 36.4 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 70/178 (39%), Gaps = 25/178 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-IFTGG 152
P + + CP+ CR C R + T LS+++ + + + + + + I TGG
Sbjct: 10 PLLVFYETTKACPLACRHC-RANALLKPLPTELSTEEAKRFIEDLTGFGRPYPILILTGG 68
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFH-SRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
DPL TL I H + + P V + +N ++++ LK + I++
Sbjct: 69 DPLTRDD--------TLELIDHARSFGIPVALSPAVSTKLLNDDILRELKGRVSSISISL 120
Query: 212 HANHPY-------------EFSEEAIAAISRLANAGIILLSQSVLLK-GINDDPEILA 255
P + + ++L + GI + +++ +++ P++
Sbjct: 121 DGAKPETHNYIRRTALERIDVFRTTLEVFNKLRSYGIEFQVNTAVMRLNVHELPQVFK 178
>gi|295400597|ref|ZP_06810575.1| YfkB-like domain protein [Geobacillus thermoglucosidasius C56-YS93]
gi|294977500|gb|EFG53100.1| YfkB-like domain protein [Geobacillus thermoglucosidasius C56-YS93]
Length = 374
Score = 36.4 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 75/226 (33%), Gaps = 43/226 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + ++ L L I + + TGG+P +LS
Sbjct: 35 FTTTTLCNMRCEHCAVGYTLQTKDPEALPLDLLIKRLEEI---PHLRSLSITGGEP-MLS 90
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH- 215
K + + L H + +R ++N L L K P +H +H
Sbjct: 91 LKSVDNYVVPLLKYAHERGVR----------TQLNSNLTLELDRYEKVIPYLDVLHISHN 140
Query: 216 PYEFSEEAIAAISR-----------------------LANAGIILLSQSVLLKGINDDPE 252
+ +R LA AG+I+ ++++L K P
Sbjct: 141 WGTIDDFVEGGFARMERKPSVAQREKYFERMIENAKALAKAGVIVSAETMLNKR--TVPH 198
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL-TIEEGQKIVASL 297
+ + E+ K + +H + S +++E ++ + L
Sbjct: 199 LEKIHRQVVDEMHCKRHEVHPMYPSDFASALETLSLDELRQAIHHL 244
>gi|255280937|ref|ZP_05345492.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bryantella formatexigens
DSM 14469]
gi|255268385|gb|EET61590.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bryantella formatexigens
DSM 14469]
Length = 518
Score = 36.4 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 56/143 (39%), Gaps = 20/143 (13%)
Query: 73 EREDPIGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
+ + ++ + +YP + + ++ C +C +C + G ++ ++
Sbjct: 203 GMIIDVWKDTDKIVENLPVERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--RE 260
Query: 131 TEAALAYIQEKSQIWEVIFTGGD--------PLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ + + EV+ G + P +S +L L+ + I ++ +RF
Sbjct: 261 ILREIERLAADGVV-EVMLLGQNVNSYGKNLPEPMSFAQL---LREVEKIDGIKRIRF-- 314
Query: 183 RVPIVDPQRINPELIQCLKEAGK 205
P+ ++ ELI+ + + K
Sbjct: 315 --MTSHPKDLSDELIEVMASSEK 335
>gi|206889368|ref|YP_002249102.1| heme biosynthesis (NirJ-2) family protein, putative
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741306|gb|ACI20363.1| heme biosynthesis (NirJ-2) family protein, putative
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 472
Score = 36.4 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTP-VI---ANLINPHNPNDPIARQFIPQKEEL-N 68
L + +L + ++ + +++P +L++ + + ++ ++I + EL
Sbjct: 7 LNDIHLFSIRDEHFLLDVEGNKIFSISPEAYEIALSLMSGNKSTNKLSLRYIRAERELRK 66
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVL- 126
I + H Y L L H C + C +CF Q
Sbjct: 67 IFDSFEPLNSEEIEHRSKLLEEKPYKLNGLWLGLAHACNLGCSYCFANTPNYLQNHRPFM 126
Query: 127 SSKDTEAALAY-IQEKSQIWE--VIFTGGDPLILSHKRLQKVLK 167
S + + A+ + I + I E +IF GG+PL L LQKV+
Sbjct: 127 SEETAKRAIDFLINQSPDIEEYDIIFFGGEPL-LKFDLLQKVVD 169
>gi|146297421|ref|YP_001181192.1| thiamine biosynthesis protein ThiH [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410997|gb|ABP68001.1| iron-only hydrogenase maturation protein HydG [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 477
Score = 36.4 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 75/232 (32%), Gaps = 31/232 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C CR+C K L+ + + I+ + G DP
Sbjct: 87 LYISNFCVNNCRYCGYHRSNTKMKRRKLTMDEIRKEVEIIESLGHKRIALELGEDP---K 143
Query: 159 HKRLQKVLKTLRYI-------KHVQILRFHSRVPIVDPQRINPE-----LIQCLKEAGKP 206
++ V+ + I +++ + + ++ R+ E + + +P
Sbjct: 144 EAPIEYVIDAINTIYSVYKEKGNIRRVNVNIAATTIEEYRMLKEAKIGTYVLFQETYHRP 203
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLMRTFVE 263
Y +H P + A+ R GI L L + ++ +
Sbjct: 204 TYEYMHPEGPKSDYDWHTMAMDRAMQGGIDDVGLGVLFGLYDYKFEVVGLILHAKHLEER 263
Query: 264 LRIKPYYLHHPD--------LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ + P + + ++ +E +KIVA ++ L P
Sbjct: 264 FGVGPHTISVPRIRPAEGVEVTKEKYPYLVSDDEFKKIVAIIR-----LAVP 310
>gi|317014178|gb|ADU81614.1| molybdenum cofactor biosynthesis protein A [Helicobacter pylori
Gambia94/24]
Length = 321
Score = 36.4 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILS 158
+ C C++C + L + AL + I + ++ TGG+PL+
Sbjct: 17 VTKQCNFRCQYCMPTTPLDFFDDEELLP--LDNALEFLKIAIDEGVKKIRITGGEPLLR- 73
Query: 159 HKRLQKVLKTLRY 171
K L + + L
Sbjct: 74 -KGLDEFIAKLHA 85
>gi|56418960|ref|YP_146278.1| hypothetical protein GK0425 [Geobacillus kaustophilus HTA426]
gi|56378802|dbj|BAD74710.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 374
Score = 36.4 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 77/226 (34%), Gaps = 43/226 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + + L + L ++E + + TGG+P +LS
Sbjct: 35 FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 90
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH- 215
K +++ + L H + +R ++N L L P +H +H
Sbjct: 91 LKSVEQYVVPLLRYAHERGVR----------TQLNSNLTLDLSRYEPVIPYLDVLHISHN 140
Query: 216 PYEFSEEAIAAISR-----------------------LANAGIILLSQSVLLKGINDDPE 252
+ + LANAG+++ ++++L K E
Sbjct: 141 WGTIDDFVEGGFAMMERKPTRAQREKYFQRMLDNAKALANAGVMVSAETMLNKRTVRHLE 200
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL-TIEEGQKIVASL 297
+ + + + + +H + S +++E ++ + L
Sbjct: 201 TI--HRQVVEAMGCRRHEIHPMYPSDFASALETLSLDELREAIHHL 244
>gi|312112313|ref|YP_003990629.1| YfkB-like domain-containing protein [Geobacillus sp. Y4.1MC1]
gi|311217414|gb|ADP76018.1| YfkB-like domain-containing protein [Geobacillus sp. Y4.1MC1]
Length = 374
Score = 36.4 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 75/226 (33%), Gaps = 43/226 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + ++ L L I + + TGG+P +LS
Sbjct: 35 FTTTTLCNMRCEHCAVGYTLQTKDPEALPLDLLIKRLEEI---PHLRSLSITGGEP-MLS 90
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH- 215
K + + L H + +R ++N L L K P +H +H
Sbjct: 91 LKSVDNYVVPLLKYAHERGVR----------TQLNSNLTLELDRYEKVIPYLDVLHISHN 140
Query: 216 PYEFSEEAIAAISR-----------------------LANAGIILLSQSVLLKGINDDPE 252
+ +R LA AG+I+ ++++L K P
Sbjct: 141 WGTIDDFVEGGFARMERKPSVAQREKYFERMIENAKALAKAGVIVSAETMLNKR--TVPH 198
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL-TIEEGQKIVASL 297
+ + E+ K + +H + S +++E ++ + L
Sbjct: 199 LEKIHRQVVDEMHCKRHEVHPMYPSDFASALETLSLDELRQAIHHL 244
>gi|257059021|ref|YP_003136909.1| radical activating enzyme [Cyanothece sp. PCC 8802]
gi|256589187|gb|ACV00074.1| radical activating enzyme [Cyanothece sp. PCC 8802]
Length = 205
Score = 36.4 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L C V+C +C ++E Q S + A + I VI TGG+PL+
Sbjct: 31 AFFIRLAGCDVHCPWCDQKESWPVQPYPQQSLEALGEAAK--RANPAI--VIITGGEPLM 86
Query: 157 LSHKRLQKVLKTLRYIKHVQI 177
+ L L+ L H++
Sbjct: 87 HNLDPLTAQLRGLGLRVHLET 107
>gi|310823369|ref|YP_003955727.1| hypothetical protein STAUR_6143 [Stigmatella aurantiaca DW4/3-1]
gi|309396441|gb|ADO73900.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 480
Score = 36.4 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 92 RYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
+Y R + + C C++C V + ++ + + AL + +
Sbjct: 85 KYRTRAEQLAAFTGLHIFVVTLRCDHSCQYCQVSRQVEDRARFDMTREHADRALDLVFQS 144
Query: 142 SQIW-EVIFTGGDPLILSHKRLQKVLKT 168
++ F GG+PL L+ ++ V++
Sbjct: 145 PSPALKIEFQGGEPL-LNFGLIRHVVER 171
>gi|251771685|gb|EES52260.1| Radical SAM family protein [Leptospirillum ferrodiazotrophum]
Length = 213
Score = 36.4 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 35/117 (29%), Gaps = 11/117 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
CP+ CR+C + ++ + V TGG+P
Sbjct: 22 CFFIRTTGCPLRCRWCDTTYSFYEGEERT-----LDSLVDEALSHPAPL-VEVTGGEPF- 74
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
S L ++++ L + + + + PQ + + + P H
Sbjct: 75 -SAPELPRLVEKLLDAG--KTVLIETSGALPVPQGL-DRRCHLVMDIKPPGSGMAHL 127
>gi|218245972|ref|YP_002371343.1| hypothetical protein PCC8801_1116 [Cyanothece sp. PCC 8801]
gi|218166450|gb|ACK65187.1| conserved hypothetical protein [Cyanothece sp. PCC 8801]
Length = 205
Score = 36.4 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L C V+C +C ++E Q S + A + I VI TGG+PL+
Sbjct: 31 AFFIRLAGCDVHCPWCDQKESWPVQPYPQQSLEALGEAAK--RANPAI--VIITGGEPLM 86
Query: 157 LSHKRLQKVLKTLRYIKHVQI 177
+ L L+ L H++
Sbjct: 87 HNLDPLTAQLRGLGLRVHLET 107
>gi|295115178|emb|CBL36025.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [butyrate-producing
bacterium SM4/1]
Length = 457
Score = 36.4 bits (83), Expect = 7.5, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 70 LPEEREDPIGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ I + ++ + +YP + + ++ C +C +C + G ++
Sbjct: 137 HTGKMVIDIWKDTDKIVEDLPSERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSRRP- 195
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGG----------DPLILSHKRLQKVLKTLRYIKHVQI 177
+D + + + EV+ G +P+ ++L+ + I+ ++
Sbjct: 196 -EDIIKEIEGLVADGVV-EVMLLGQNVNSYGKNLPEPIT-----FAELLRRVEQIEGLER 248
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK 205
+RF P+ ++ ELI+ ++++ K
Sbjct: 249 IRF----MTSHPKDLSDELIEVMRDSKK 272
>gi|187736032|ref|YP_001878144.1| pyruvate formate-lyase activating enzyme [Akkermansia muciniphila
ATCC BAA-835]
gi|187426084|gb|ACD05363.1| pyruvate formate-lyase activating enzyme [Akkermansia muciniphila
ATCC BAA-835]
Length = 259
Score = 36.4 bits (83), Expect = 7.5, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 39/114 (34%), Gaps = 29/114 (25%)
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY--------PDRILLKLLHVCPVYCR 110
Q PQ DP G+ S + G+VH P + L C + CR
Sbjct: 3 QVFPQ----------NHDPDGE---SSVTGLVHSVESCGTVDGPGIRFVLFLSGCSLRCR 49
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----VIFTGGDPLILSH 159
+C + ++G S+ D L I + V +GGDPL
Sbjct: 50 YCHNPDTSYVRRGRTRSADD---VLKEIARYRDFLQAAGGGVTLSGGDPLFQPD 100
>gi|218261905|ref|ZP_03476578.1| hypothetical protein PRABACTJOHN_02249 [Parabacteroides johnsonii
DSM 18315]
gi|218223699|gb|EEC96349.1| hypothetical protein PRABACTJOHN_02249 [Parabacteroides johnsonii
DSM 18315]
Length = 431
Score = 36.0 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 74/214 (34%), Gaps = 35/214 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEV 147
LK+ C C +C G + + ++ E + + ++ ++
Sbjct: 135 RHYAYLKIAEGCDRTCSYCAIPISTGRYQ--SIPMEEIEKEVRLLVKQGVKEFQVIAQDL 192
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ G D + L ++++ + I V+ +R H P P +L++ ++E
Sbjct: 193 TYYGLD--LYKRHALPELVERISDIPGVEWIRLHYGYPSHFPY----DLLRVMRERDNVC 246
Query: 208 -YIAIHANHP---------YEFS-EEAIAAISRLANA--GIILLSQSVLLKGINDDPEIL 254
Y+ I H + EE A I R+ GI L + ++++ + +
Sbjct: 247 KYMDIALQHISDPMLKKMRRNITKEETYALIRRMREEVPGIHLRT-TLMVGHPGETEQDF 305
Query: 255 ANLMR-----TFVELRIKPYYLHHPDLAAGTSHF 283
L+ F + Y H + H+
Sbjct: 306 EELVEFVKEARFERMGAFAYS--HEEGTYSFKHY 337
>gi|118473671|ref|YP_889931.1| molybdenum cofactor biosynthesis protein A [Mycobacterium smegmatis
str. MC2 155]
gi|166217882|sp|A0R443|MOAA_MYCS2 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|118174958|gb|ABK75854.1| molybdenum cofactor biosynthesis protein A [Mycobacterium smegmatis
str. MC2 155]
Length = 361
Score = 36.0 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 101 LLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L C + C +C E + +LS + L + I V FTGG+PL+
Sbjct: 46 LTDRCNLRCTYCMPAEGLNWLPGDALLSPTELARLLRIAVARLGITSVRFTGGEPLV 102
>gi|159038471|ref|YP_001537724.1| radical SAM domain-containing protein [Salinispora arenicola
CNS-205]
gi|157917306|gb|ABV98733.1| Radical SAM domain protein [Salinispora arenicola CNS-205]
Length = 389
Score = 36.0 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI- 148
V P ++ + CP+ C C + + + + + +A I + +
Sbjct: 8 VRERPFIVIWEATQACPLACLHCRASARPDRDRAELDTDEAID-LMAQIAALGRPTPLFV 66
Query: 149 FTGGDPLILSHKRL 162
TGGDP L
Sbjct: 67 ITGGDPFQRPDLEL 80
>gi|21698998|dbj|BAC02731.1| moaA / nifB / pqqE family [Bacillus licheniformis]
Length = 385
Score = 36.0 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 62/196 (31%), Gaps = 17/196 (8%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ P ++ +L C + C C R + L+ K+ + + I ++ TG
Sbjct: 8 KSPFIVIWELTRACELKCLHC-RASAQNKRDPRELTLKEGKDLIDQIHAMDNPL-LVLTG 65
Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-- 207
GDPL+ ++ ++ V++ S P V + I L +
Sbjct: 66 GDPLMRDDVFAIIEYAVQK-----GVRVSMTPSATPNVTREAIQSAKEIGLSRWAFSLDG 120
Query: 208 ---YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
I H + + AI + + L +V+ D + +A L+
Sbjct: 121 PTREIHDHFRGTDGSFDLTMKAIRYIHECHLPLQINTVISAYNIDYLDEMAKLIEEL--- 177
Query: 265 RIKPYYLHHPDLAAGT 280
+ +
Sbjct: 178 NCVLWSVFFLVPTGRA 193
>gi|224535652|ref|ZP_03676191.1| hypothetical protein BACCELL_00516 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522725|gb|EEF91830.1| hypothetical protein BACCELL_00516 [Bacteroides cellulosilyticus
DSM 14838]
Length = 472
Score = 36.0 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 8/129 (6%)
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVL 126
++ D H + Y +RI++ + C C +C + L
Sbjct: 58 ECDQPDLTERIFHLAREIKQKLYGNRIVMFAPLYLSNYCVNGCVYCPYHAKNRTIARKKL 117
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHS 182
S ++ + +Q+ + G DPL + + ++T+ I H ++ + +
Sbjct: 118 SQEEIRREVVALQDMGHKRLALEAGEDPLRNPIDYILESIQTIYGIHHKNGAIRRVNVNI 177
Query: 183 RVPIVDPQR 191
V+ R
Sbjct: 178 AATTVENYR 186
>gi|167585516|ref|ZP_02377904.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ubonensis
Bu]
Length = 457
Score = 36.0 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 42/133 (31%), Gaps = 23/133 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153
+ ++ C YC +C V S+ + L + + EV G +
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNV 203
Query: 154 -----PLILSHKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L + ++ + I ++ +R+ + P+ LI + K
Sbjct: 204 NAYRGALTAGSSEIADFATLIEYVADIPGIERIRYTTS----HPKEFTQRLIDMYAKVPK 259
Query: 206 PVYIAIHANHPYE 218
+ H + P +
Sbjct: 260 ---LVNHLHLPVQ 269
>gi|52080450|ref|YP_079241.1| coenzyme PQQ synthesis protein, putative [Bacillus licheniformis
ATCC 14580]
gi|52785831|ref|YP_091660.1| moaA/nifB/pqqE family protein [Bacillus licheniformis ATCC 14580]
gi|319645590|ref|ZP_07999822.1| MoaA/nifB/pqqE family protein [Bacillus sp. BT1B_CT2]
gi|52003661|gb|AAU23603.1| Coenzyme PQQ synthesis protein, putative [Bacillus licheniformis
ATCC 14580]
gi|52348333|gb|AAU40967.1| moaA / nifB / pqqE family [Bacillus licheniformis ATCC 14580]
gi|317392476|gb|EFV73271.1| MoaA/nifB/pqqE family protein [Bacillus sp. BT1B_CT2]
Length = 367
Score = 36.0 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ P ++ +L C + C C R + LS K+ + + I ++ TG
Sbjct: 8 KSPFIVIWELTRACELKCLHC-RASAQNKRDPRELSLKEGKDLIDQIHAMDNPL-LVLTG 65
Query: 152 GDPLILSH 159
GDPL+
Sbjct: 66 GDPLMRDD 73
>gi|298385677|ref|ZP_06995235.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
gi|298261818|gb|EFI04684.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
Length = 436
Score = 36.0 bits (82), Expect = 8.2, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 15/126 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISK--PMEEIVDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + + L ++++ + I V+ +R H P +L + ++E Y+
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDNVCKYM 249
Query: 210 AIHANH 215
I H
Sbjct: 250 DIALQH 255
>gi|237669370|ref|ZP_04529352.1| ThiH/BioB family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 468
Score = 36.0 bits (82), Expect = 8.2, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Query: 90 VHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
Y +RI++ + C C +C + L+ ++ + + +Q+
Sbjct: 73 QKFYGNRIVMFAPLYLSNYCVNGCVYCPYHHKNKHIRRKKLTQEEIKNEVIALQDMGHKR 132
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR 191
+ TG DP+ + + + +KT+ IKH ++ + + V+ R
Sbjct: 133 LALETGEDPVNNPIEYVLESIKTIYGIKHKNGAIRRVNVNIAATTVENYR 182
>gi|182419049|ref|ZP_02950303.1| thiamine biosynthesis protein ThiH [Clostridium butyricum 5521]
gi|182377004|gb|EDT74574.1| thiamine biosynthesis protein ThiH [Clostridium butyricum 5521]
gi|256258836|gb|EEP52815.2| putative thiazole biosynthesis protein [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 472
Score = 36.0 bits (82), Expect = 8.2, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Query: 90 VHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
Y +RI++ + C C +C + L+ ++ + + +Q+
Sbjct: 77 QKFYGNRIVMFAPLYLSNYCVNGCVYCPYHHKNKHIRRKKLTQEEIKNEVIALQDMGHKR 136
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR 191
+ TG DP+ + + + +KT+ IKH ++ + + V+ R
Sbjct: 137 LALETGEDPVNNPIEYVLESIKTIYGIKHKNGAIRRVNVNIAATTVENYR 186
>gi|218135329|ref|ZP_03464133.1| hypothetical protein BACPEC_03234 [Bacteroides pectinophilus ATCC
43243]
gi|217990714|gb|EEC56725.1| hypothetical protein BACPEC_03234 [Bacteroides pectinophilus ATCC
43243]
Length = 248
Score = 36.0 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGG 152
P + C + C+FC + + G +S+ D + AL Y + +GG
Sbjct: 16 PGVRFVIFTQGCHMRCQFCHNPDTWNMEDGEEMSADDLLKQALRYKSYWKNKGGITVSGG 75
Query: 153 DPLILSHKRLQ 163
+PL+ ++
Sbjct: 76 EPLLQMDFLIE 86
>gi|116619443|ref|YP_821599.1| radical SAM domain-containing protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116222605|gb|ABJ81314.1| Radical SAM domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 224
Score = 36.0 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 7/86 (8%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ C + C +C +GT L+ E L + V+ TGG+P+I
Sbjct: 22 VFIRTSGCNLRCSWCDTPYTSWRPEGTDLT---LEQILDEVGAHPA-RHVVVTGGEPMIA 77
Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHS 182
+ + + LR H+ I +
Sbjct: 78 PD--IVALTQRLRARNLHITIETAGT 101
>gi|282858353|ref|ZP_06267533.1| translation initiation factor IF-1 [Prevotella bivia JCVIHMP010]
gi|282588801|gb|EFB93926.1| translation initiation factor IF-1 [Prevotella bivia JCVIHMP010]
Length = 72
Score = 36.0 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
FR+ +E G +I+ ISG + YI LPG KV++ +++ G
Sbjct: 22 FRVELENGVEII----AHISGKMRMHYIKILPGDKVKVEMSPYDL---TKGRIVFRY 71
>gi|195493308|ref|XP_002094360.1| GE21783 [Drosophila yakuba]
gi|194180461|gb|EDW94072.1| GE21783 [Drosophila yakuba]
Length = 385
Score = 36.0 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y L C + C +C E V K +L++ + I + + +
Sbjct: 66 GRHHTYLRISL---TERCNLRCDYCMPAEGVPLQPKNNLLTTGEILRLAR-IFVEQGVRK 121
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ TGG+P + + +++ ++ + ++ + +
Sbjct: 122 IRLTGGEPTVRRD--IVEIVAQMKALPELEQVGITTNG 157
>gi|167519094|ref|XP_001743887.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777849|gb|EDQ91465.1| predicted protein [Monosiga brevicollis MX1]
Length = 890
Score = 36.0 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 14/121 (11%)
Query: 194 PELIQCLKEA-GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
PEL ++ P + A E +E+ ++RL AG ++ +Q + DDP+
Sbjct: 323 PELCLLVRLYNRSPRWFAATTLRYPEIAEDVQPILARLVQAGAMIDAQHL------DDPQ 376
Query: 253 ILANLM--RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
L+ + +ELR + + L DL G + A+ + ++G P +
Sbjct: 377 AALELLNAQQLIELRRRLH-LDKVDLGTGRRDVMTNLLRA----AAAQSTLAGPAGPALV 431
Query: 311 L 311
L
Sbjct: 432 L 432
>gi|153816459|ref|ZP_01969127.1| hypothetical protein RUMTOR_02712 [Ruminococcus torques ATCC 27756]
gi|331087554|ref|ZP_08336485.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Lachnospiraceae bacterium 3_1_46FAA]
gi|145846201|gb|EDK23119.1| hypothetical protein RUMTOR_02712 [Ruminococcus torques ATCC 27756]
gi|330400694|gb|EGG80298.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Lachnospiraceae bacterium 3_1_46FAA]
Length = 483
Score = 36.0 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 53/127 (41%), Gaps = 26/127 (20%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVI 148
+YP + + ++ C +C +C + S+D +A + I+ + + EV+
Sbjct: 186 RKYPFKSGVNIMFGCNNFCSYC-----IVPYVRGRERSRDPKAIIREIERLAEDGVVEVM 240
Query: 149 FTGGD----------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
G + P+ ++L+ + I ++ +RF P+ ++ ELI+
Sbjct: 241 LLGQNVNSYGKTLEHPMT-----FAQLLREIEKIDKIERIRF----MTSHPKDLSDELIE 291
Query: 199 CLKEAGK 205
+ ++ K
Sbjct: 292 VMAQSKK 298
>gi|313111348|ref|ZP_07797163.1| putative radical-activating enzyme [Pseudomonas aeruginosa 39016]
gi|310883665|gb|EFQ42259.1| putative radical-activating enzyme [Pseudomonas aeruginosa 39016]
Length = 232
Score = 36.0 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 70/195 (35%), Gaps = 21/195 (10%)
Query: 93 YPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
YP + + C CR+C E++ + + L +++ + + V+F+
Sbjct: 18 YPGLLACVLFCQGCAWRCRYCHNPELIAPRGAEEIP---WPRLLDFLRRRQGLLQAVVFS 74
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ------CLKEAG 204
GG+ + + L ++T+R + R ++P+ L Q +K
Sbjct: 75 GGEATLQAA--LGDAMRTVRELG----FRVGLHSAGINPRAFARVLAQSDWVGFDVKAPA 128
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ V + + ++ L ++G+ ++ + G+ D + L +
Sbjct: 129 EDVAAITGVDGSGAANW---RSLECLLDSGVAYECRTTVHWGLFDSERLWR-LATRLRAM 184
Query: 265 RIKPYYLHHPDLAAG 279
++ + + A
Sbjct: 185 GVERFAVQLARPARQ 199
>gi|239907939|ref|YP_002954680.1| thiazole biosynthesis protein ThiH [Desulfovibrio magneticus RS-1]
gi|239797805|dbj|BAH76794.1| thiazole biosynthesis protein ThiH [Desulfovibrio magneticus RS-1]
Length = 478
Score = 36.0 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 69/239 (28%), Gaps = 47/239 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +C + Q L+ + + ++ + G DPL
Sbjct: 90 LYISSHCINNCVYCGYKRSNKEQLRKRLTMDEIRREVEILESLGHKRLAVEAGEDPLHCP 149
Query: 159 HKRLQKVLKTLRYIK----HVQILRFHSRVP----------------IVDPQRINPELIQ 198
+ + ++ + IK ++ + + I+ + N E
Sbjct: 150 IEYVTDAIQAIYSIKDGNGSIRRVNINIAATTIEDYKKLKDAEIGTYILFQETYNRERYA 209
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
L G H + A + + GI + L G+ D +
Sbjct: 210 ALHPTGPKHDYNWHT------TAMDRAMQGGIDDVGIGV------LYGLYDWKYETVAMF 257
Query: 259 ----RTFVELRIKPYYLHHPDLAAGTS------HFRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ + P + + + + E +KI+A ++ L P
Sbjct: 258 LHAEHLEKTFGVGPHTISVPRMRPAGAVNLDTFPYLVPDEAFKKIIAVIR-----LAVP 311
>gi|220932766|ref|YP_002509674.1| biotin synthase [Halothermothrix orenii H 168]
gi|219994076|gb|ACL70679.1| biotin synthase [Halothermothrix orenii H 168]
Length = 481
Score = 36.0 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 93/264 (35%), Gaps = 32/264 (12%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQK 122
L + +E + + + I Y R++L ++C C +C R K
Sbjct: 64 LQVEDQELINKFLEAARKVKEKI---YGKRLVLFAPLYFSNLCTNSCLYCSFRHNNNKVK 120
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ----------KVLKTLRYI 172
LS ++ + + ++ + ++ TG P ++ + +R I
Sbjct: 121 RKKLSIEEIKEEVRALEREGHKRLLVLTGETPETDLDYVVEGIKAAYETRTEHGGEIRRI 180
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
+V+I + + + +P Y +H + P + ++ + R
Sbjct: 181 -NVEIAPLTTEDFKKLKEAKIGTYTCFQETYHRPTYKKMHPSGPKADYDWRLSVMDRAQQ 239
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFV---ELRIKPYYLHHPDLAAGTSH------F 283
AGI + L + E++A L+ + + P+ + P L +
Sbjct: 240 AGIDDIGIGALFGLYDYKFEVIALLLHSEYLDKTYGVGPHTISVPRLNPALGAPVQEPPY 299
Query: 284 RLTIEEGQKIVASLKEKISGLCQP 307
++ E+ +K+VA L+ L P
Sbjct: 300 PVSDEDFRKLVAILR-----LAVP 318
>gi|163814895|ref|ZP_02206283.1| hypothetical protein COPEUT_01046 [Coprococcus eutactus ATCC 27759]
gi|158449834|gb|EDP26829.1| hypothetical protein COPEUT_01046 [Coprococcus eutactus ATCC 27759]
Length = 461
Score = 36.0 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E ++S + + +L ++ S EV F GG+PL
Sbjct: 96 LHIAHDCNLACRYCFAGEGEYKGDRALMSLEVAKKSLDFLVANSGFRRNLEVDFFGGEPL 155
Query: 156 I 156
+
Sbjct: 156 M 156
>gi|167643994|ref|YP_001681657.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Caulobacter
sp. K31]
gi|229890472|sp|B0T155|MIAB_CAUSK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|167346424|gb|ABZ69159.1| RNA modification enzyme, MiaB family [Caulobacter sp. K31]
Length = 450
Score = 36.0 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 32/114 (28%), Gaps = 5/114 (4%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D D L L + C +C FC G + E
Sbjct: 134 SADFAADEKFDALPAERQVSGVSAFLTVQEGCDKFCTFCVVPYTRG--GEWSRPPEQIED 191
Query: 134 ALAYIQEKSQIWEVIFTGGD--PLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + EV G + L ++++ L I + +R+ + P
Sbjct: 192 EARRL-ADQGVREVTLLGQNVNAYDGGGYTLARLVRRLAKIPGLDRIRYTTSHP 244
>gi|210613376|ref|ZP_03289696.1| hypothetical protein CLONEX_01903 [Clostridium nexile DSM 1787]
gi|210151218|gb|EEA82226.1| hypothetical protein CLONEX_01903 [Clostridium nexile DSM 1787]
Length = 250
Score = 36.0 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 17/179 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTG 151
P + CP+ C +C + KGT ++ + Y V TG
Sbjct: 18 PGIRYVIFFQGCPMRCLYCHNPDTWEPNKGTQMTVDEVLEGF-Y-SNMPFYHNGGVTVTG 75
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP--QRINPELIQCLKEAGKPVYI 209
G+P ++ L ++ L + S + P + +L L+ +
Sbjct: 76 GEP-MMQMDFLIELFTKLHK-DGIHTC-IDSSGIMFQPDNETFMNKLDTLLEVTDLIMLD 132
Query: 210 AIHAN---HPYEFSEEAIAAI----SRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
H N H E + + I L I + + V++ GI E L L
Sbjct: 133 IKHINPQKH-KELTAHSNERILAFAKYLDEKHIPVWIRHVVVPGITLYKEYLEELGHFL 190
>gi|228473183|ref|ZP_04057938.1| radical SAM domain protein [Capnocytophaga gingivalis ATCC 33624]
gi|228275333|gb|EEK14125.1| radical SAM domain protein [Capnocytophaga gingivalis ATCC 33624]
Length = 200
Score = 36.0 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
P+ ++ ++ Y + C V C +C +E + + ++
Sbjct: 7 PLMEDFYTIQG--EGFYRGTAAYFIRLAGCDVGCHWCDVKESWDASVHPRVPIEEIAQ-- 62
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
+ + +I TGG+PL+ + + L ++LK+ H++
Sbjct: 63 ---RALAHSKTIIITGGEPLMYNLQPLTELLKSKGARTHIET 101
>gi|281355779|ref|ZP_06242273.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548]
gi|281318659|gb|EFB02679.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548]
Length = 325
Score = 36.0 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 10/103 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156
+L C ++CRFC + + + + + L + ++ + E+ GG+PL+
Sbjct: 12 FQLTGRCNLHCRFCGQSKGMLAAGESELPVETWLRLAREVRALADTPEPEITLWGGEPLL 71
Query: 157 LS-HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
S RL + LK + R + R+ L +
Sbjct: 72 YSGFPRLARRLKE-------EGFRVAAVTNGTLIDRMPELLCE 107
>gi|291544295|emb|CBL17404.1| iron-only hydrogenase maturation protein HydG [Ruminococcus sp.
18P13]
Length = 471
Score = 36.0 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 45/128 (35%), Gaps = 8/128 (6%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLS 127
E D + + + + Y +RI++ + C C +C L+
Sbjct: 59 CELPDKLAEVYELAEQIKLDFYGNRIVIFAPLYLSNYCVNGCVYCPYHMKNKHIARKKLT 118
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSR 183
++ + +Q+ I G DP+ + + + T+ IKH ++ + +
Sbjct: 119 QEEVAREVIALQDMGHKRLAIEAGEDPVNNPIEYILDCINTIYSIKHKNGAIRRVNVNIA 178
Query: 184 VPIVDPQR 191
V+ R
Sbjct: 179 ATTVENYR 186
>gi|304316847|ref|YP_003851992.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778349|gb|ADL68908.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 437
Score = 36.0 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 17/146 (11%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY-- 137
+ + + ++ LK+ C C FC ++ G + E +
Sbjct: 129 ELDDANSPRMLSTPKHYGYLKIAEGCNNKCSFCIIPKLRGHYRSVK-----IEDLVNEAK 183
Query: 138 IQEKSQIWEVIFTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
I K+ + E+I D I L +L+ L I ++ +R P I
Sbjct: 184 IMAKNGVRELILIAQDTTKYGIDIYKKFMLPTLLRELSKIDEIKWIRI----LYAYPDSI 239
Query: 193 NPELIQCLKEAGKPV-YIAIHANHPY 217
ELI+ ++ K + Y+ + H
Sbjct: 240 TDELIEEIRTNSKLLKYVDMPLQHSN 265
>gi|255324513|ref|ZP_05365630.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
tuberculostearicum SK141]
gi|255298419|gb|EET77719.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
tuberculostearicum SK141]
Length = 370
Score = 36.0 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 77/217 (35%), Gaps = 25/217 (11%)
Query: 101 LLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
L C + C +C E + LS ++T + K I +V FTGG+PL+
Sbjct: 52 LTDRCNLRCTYCMPAEGLEWMPTEQTLSDEETIRLIRIGVGKLGIRQVRFTGGEPLLR-- 109
Query: 160 KRLQKVLKTLRYIKHVQ----ILRFHSRVPIVDP----------QRINPELIQCLKEAGK 205
K L+K++ + ++ Q + ++ RIN L +E
Sbjct: 110 KSLEKIIAATKQLRTDQGRSPSTALTTNGLGLEKRADALAAAGLDRINISLDTIDRERYA 169
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ +H + A AA + +V++ G+N+ E + L V
Sbjct: 170 ALTRRDRLDHVLQAIAAADAAGLH------PIKINAVVMPGVNE--EDIVPLADYAVHHG 221
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
+ ++ L R + + I+ L+ S
Sbjct: 222 AQLRFIEQMPLGPREQWRREDMVTAEDILTRLRTHFS 258
>gi|317500218|ref|ZP_07958449.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium
8_1_57FAA]
gi|316898389|gb|EFV20429.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium
8_1_57FAA]
Length = 483
Score = 36.0 bits (82), Expect = 9.2, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 53/127 (41%), Gaps = 26/127 (20%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVI 148
+YP + + ++ C +C +C + S+D +A + I+ + + EV+
Sbjct: 186 RKYPFKSGVNIMFGCNNFCSYC-----IVPYVRGRERSRDPKAIIREIERLAEDGVVEVM 240
Query: 149 FTGGD----------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
G + P+ ++L+ + I ++ +RF P+ ++ ELI+
Sbjct: 241 LLGQNVNSYGKTLEHPMT-----FAQLLREIEKIDKIERIRF----MTSHPKDLSDELIE 291
Query: 199 CLKEAGK 205
+ ++ K
Sbjct: 292 VMAQSKK 298
>gi|88602458|ref|YP_502636.1| radical SAM family protein [Methanospirillum hungatei JF-1]
gi|88187920|gb|ABD40917.1| Radical SAM [Methanospirillum hungatei JF-1]
Length = 372
Score = 36.0 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 44/129 (34%), Gaps = 9/129 (6%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW----EVIFTG 151
+ +++ CP C +C + G+ + + + + I + G
Sbjct: 135 KGYIEISRGCPYGCTYCQTPRIFGN----TIRHRSIGSIVRLAHSFHDIRFLSPNALAYG 190
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
D L + ++ +L L I + + + + P+ ++ E + + I I
Sbjct: 191 TDGLHPDPRHIRSLLHELAKIP-DKDIFLGTFPGEIRPEFVSEEAVDLIARYCSNTRIHI 249
Query: 212 HANHPYEFS 220
A E +
Sbjct: 250 GAQSGAEST 258
>gi|331086299|ref|ZP_08335379.1| hypothetical protein HMPREF0987_01682 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406065|gb|EGG85588.1| hypothetical protein HMPREF0987_01682 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 473
Score = 36.0 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 79/236 (33%), Gaps = 21/236 (8%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVH-RYPDRILLKL----LHVCPVYCRFCFRREM 117
E +L + + + ++ + I Y +RI++ + C C +C
Sbjct: 49 SHREAAVLLDCDIEEKNEEIYALAEQIKKDFYGNRIVMFAPLYLSNYCVNGCTYCPYHLK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH--- 174
L+ ++ + +Q+ + G DP+ + + + + T+ IKH
Sbjct: 109 NKHIARKKLTQEEVRQEVIALQDLGHKRLALEAGEDPVNNPIEYILECIDTIYSIKHKNG 168
Query: 175 -VQILRFHSRVPIVDPQR-------INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
++ + + V+ R L Q + K Y+ +H P + A
Sbjct: 169 EIRRVNVNIAATTVENYRKLKAAGIGTYILFQ--ETYHKKSYLELHPTGPKHDYDYHTTA 226
Query: 227 ISRLANAGII---LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ R AGI + L K + +L + + P+ + P L
Sbjct: 227 MDRAMEAGIDDVGIGVLFGLDKYRYEFAGLLMHAEHLEAAYGVGPHTISVPRLCPA 282
>gi|189467138|ref|ZP_03015923.1| hypothetical protein BACINT_03522 [Bacteroides intestinalis DSM
17393]
gi|189435402|gb|EDV04387.1| hypothetical protein BACINT_03522 [Bacteroides intestinalis DSM
17393]
Length = 472
Score = 36.0 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI++ + C C +C + LS ++ + +Q+ +
Sbjct: 80 YGNRIVMFAPLYLSNYCVNGCVYCPYHAKNRTIARKKLSQEEIRREVITLQDMGHKRLAL 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQR 191
G DPL + + ++T+ I H ++ + + V+ R
Sbjct: 140 EAGEDPLRNPIDYILESIQTIYGIHHKNGAIRRVNVNIAATTVENYR 186
>gi|291165838|gb|EFE27885.1| thiazole biosynthesis protein thiH [Filifactor alocis ATCC 35896]
Length = 474
Score = 36.0 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 4/108 (3%)
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVL 126
E E + + + Y RI+L + C C +C + + L
Sbjct: 60 ECEDEQILAEMFELAKQIKERIYGRRIVLFAPLYLSNYCVNGCVYCPYHQKNKHIRRKKL 119
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ ++ + +Q+ + +G DPL + + + + T+ I H
Sbjct: 120 TQEEIRKEVIALQDMGHKRLALESGEDPLHSPIEYILESIDTIYNIHH 167
>gi|227501691|ref|ZP_03931740.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
accolens ATCC 49725]
gi|227077716|gb|EEI15679.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
accolens ATCC 49725]
Length = 371
Score = 36.0 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKD 130
+ + + +V RY R + L C + C +C E + LS ++
Sbjct: 24 PEDLPAAASDGTRALVDRYGRRARDLRVSLTDRCNLRCTYCMPAEGLEWMPTQQTLSDEE 83
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
T + EK I +V FTGG+PL+ K L ++ + + + + + +
Sbjct: 84 TIRLIRLGVEKLGIRQVRFTGGEPLLR--KSLADIIAATKELTTDEGIAPSTALTT 137
>gi|88809463|ref|ZP_01124971.1| possible organic radical activating enzyme [Synechococcus sp. WH
7805]
gi|88786682|gb|EAR17841.1| possible organic radical activating enzyme [Synechococcus sp. WH
7805]
Length = 208
Score = 36.0 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 9/153 (5%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
P P+ + HS +H L C V C +C +
Sbjct: 1 MSQDPPASGSLPVVETFHSLQGEGLHAGRS-AFFIRLAGCRVGCSWCDTKHSW-PADSHP 58
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK-HVQILRFHSRV 184
L D+ A A V+ TGG+PL + L + L++LR + H++
Sbjct: 59 LRPIDSLATEAAAAASDGAAFVVITGGEPLHHNLDALAQALRSLRSLPLHLETSGVDPLS 118
Query: 185 -----PIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ P+R P + L+ + + + +H
Sbjct: 119 GDPDWITLSPKRHAPPRAELLRRCHE-LKVVVH 150
>gi|210610075|ref|ZP_03288254.1| hypothetical protein CLONEX_00440 [Clostridium nexile DSM 1787]
gi|210152686|gb|EEA83692.1| hypothetical protein CLONEX_00440 [Clostridium nexile DSM 1787]
Length = 1026
Score = 36.0 bits (82), Expect = 9.8, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 62/167 (37%), Gaps = 19/167 (11%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ ++ + R R + K+++ V RE ++ + + ++ + +++
Sbjct: 783 QQTQAQIENVEKRLAGRKIEKVIYEEAVTNCEMLDREKREKEEILIATRQEIKRMEEHLK 842
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
++S+I +VI ++ L L ++ V +R L
Sbjct: 843 QQSEIRKVI-----------SEIEHRLAILEDLRSV------TRGKRFVEFLATERLRYI 885
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
K A K +Y + N+ E +E+ I N G + Q+ L G
Sbjct: 886 SKSASKRLYEITNGNYELEINEDGEFIIRDNKNGG--VRRQTATLSG 930
>gi|2626813|dbj|BAA23391.1| YfkA [Bacillus subtilis]
Length = 154
Score = 36.0 bits (82), Expect = 9.8, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I ++ + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPIDLLLKRLEEI---PRLRSISITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILR 179
LS K +++ + L H + +R
Sbjct: 90 LSLKSVKEYVVPLLKYAHERGVR 112
>gi|86606479|ref|YP_475242.1| nitrogenase cofactor biosynthesis protein NifB [Synechococcus sp.
JA-3-3Ab]
gi|86555021|gb|ABC99979.1| nitrogenase cofactor biosynthesis protein NifB [Synechococcus sp.
JA-3-3Ab]
Length = 478
Score = 36.0 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 89/276 (32%), Gaps = 46/276 (16%)
Query: 58 RQFIP--QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
RQ +P ++ + P E H + R+ + + C + C +C R+
Sbjct: 25 RQALPPHLQQRIATHPCYSEA-------------AHHHYARMHVAVAPACNIQCNYCNRK 71
Query: 116 ------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKT 168
G + ++ L + Q+ V G GDPL + + +
Sbjct: 72 FDCANESRPGVVSELLTPAEAAHKVLVIAGKIPQLTVVGIAGPGDPLANPKQTFETFARI 131
Query: 169 LRYIKHVQ----------------ILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAI 211
++ I R + + ++PE+ +
Sbjct: 132 AEKAPDLKLCLSTNGLMLPDYIDEIKRLNIDHVTLTINMVDPEIGARIYPWIRWRRKRIR 191
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
E + ++ L A I+ SVL+ GIND + R E + +
Sbjct: 192 GVEAARILHERQMESLDLLREADILCKVNSVLIPGINDTHLLEV--NRVIQEKGAFLHNI 249
Query: 272 HHPDLAA-GTSHFRLTIEEG---QKIVASLKEKISG 303
A ++F L + G Q++ +L+++ SG
Sbjct: 250 MPLISAPEHGTYFGLIGQRGPTPQEL-KALQDRCSG 284
>gi|288925693|ref|ZP_06419625.1| translation initiation factor IF-1 [Prevotella buccae D17]
gi|294674749|ref|YP_003575365.1| translation initiation factor IF-1 [Prevotella ruminicola 23]
gi|315606482|ref|ZP_07881497.1| translation initiation factor IF-1 [Prevotella buccae ATCC 33574]
gi|317503958|ref|ZP_07961966.1| translation initiation factor IF-1 [Prevotella salivae DSM 15606]
gi|288337631|gb|EFC75985.1| translation initiation factor IF-1 [Prevotella buccae D17]
gi|294473082|gb|ADE82471.1| translation initiation factor IF-1 [Prevotella ruminicola 23]
gi|315251888|gb|EFU31862.1| translation initiation factor IF-1 [Prevotella buccae ATCC 33574]
gi|315664984|gb|EFV04643.1| translation initiation factor IF-1 [Prevotella salivae DSM 15606]
Length = 72
Score = 35.6 bits (81), Expect = 10.0, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
FR+ +E G +I+ ISG + YI LPG KV++ +++ G
Sbjct: 22 FRVELENGVQII----AHISGKMRMHYIKILPGDKVKVEMSPYDL---TKGRIVFRY 71
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.150 0.428
Lambda K H
0.267 0.0462 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,489,628,099
Number of Sequences: 14124377
Number of extensions: 156223201
Number of successful extensions: 500275
Number of sequences better than 10.0: 3377
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 2275
Number of HSP's that attempted gapping in prelim test: 495321
Number of HSP's gapped (non-prelim): 3670
length of query: 352
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 212
effective length of database: 2,865,380,850
effective search space: 607460740200
effective search space used: 607460740200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 82 (36.0 bits)