HHsearch alignment for GI: 254781066 and conserved domain: CHL00201

Probab=99.15  E-value=9.9e-11  Score=82.99  Aligned_cols=112  Identities=12%  Similarity=0.110  Sum_probs=67.6

Q ss_pred             CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEECC-----CCCCC-CC---CCEEEECCCCCCCCCCCCC
Q ss_conf             478831261548999999999999999999879889847821056-----89854-45---4124102478867832000
Q gi|254781066|r    8 PWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-----PGNET-HI---RAFSTELIIQDHIRKPLYL   78 (355)
Q Consensus         8 ~~~~~~~~~r~R~~l~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~-----~~g~~-~~---~~f~t~~~~~~~~~~~~yL   78 (355)
T Consensus         7 ~kG~rD~lp---~e~~~~~~i~~~i~~~f~~~Gf~~I~TP~lE~~e~~~~~~g~~~d~i~k~~y~----f~D~~g~~l~L   79 (424)
T CHL00201          7 LRGTKDILP---DEIEYWQFIHEKAATLLKLANYQEIRTPIFENTELFDRGIGEETDIVNKEMYR----FFDRGNRSITL   79 (424)
T ss_pred             CCCCCCCCH---HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCHHHHHHHEE----EECCCCCEEEE
T ss_conf             999987899---99999999999999999985992504754041988623578742056665325----45599988886


Q ss_pred             CC--CHHHHHHHHHHHH-------HHHHHHHHHHHCCCCCCCCCCCCEEEECEEECCCC
Q ss_conf             02--8589999898744-------68899988642456777544843002000115776
Q gi|254781066|r   79 QT--SPEFSCKKLLAAG-------EEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES  128 (355)
Q Consensus        79 ~~--SPql~lK~ll~~G-------~~rvyqig~~FRaE~~~~rHlpEFtmLE~e~af~d  128 (355)
T Consensus        80 RpD~T~pia--R~~~~~~~~~~~~P~r~~y~g~vfR~e~pq~GR~REF~Q~gvEiiG~~  136 (424)
T CHL00201         80 RPEGTASIV--RAFIENRMAYHMRPQRLWYSGPMFRYERPQSGRQRQFHQLGIEFIGSS  136 (424)
T ss_pred             CCCCHHHHH--HHHHHCCCCCCCCCEEEEEECCEEECCCCCCCCCCHHHHCCEEEECCC
T ss_conf             787709999--999974765579987899875478058987886421041462000689